changeset 1:faf8dedd652e draft

planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
author devteam
date Tue, 13 Oct 2015 12:43:20 -0400
parents 814d8cd3cdb4
children 1f092eb388c1
files fastq_masker_by_quality.xml tool_dependencies.xml
diffstat 2 files changed, 6 insertions(+), 8 deletions(-) [+]
line wrap: on
line diff
--- a/fastq_masker_by_quality.xml	Thu Jan 23 12:30:55 2014 -0500
+++ b/fastq_masker_by_quality.xml	Tue Oct 13 12:43:20 2015 -0400
@@ -52,12 +52,10 @@
 
 This tool is not available for use on color space (csSanger) formats.
 
-------
-
-**Citation**
-
-If you use this tool, please cite `Blankenberg D, Gordon A, Von Kuster G, Coraor N, Taylor J, Nekrutenko A; Galaxy Team. Manipulation of FASTQ data with Galaxy. Bioinformatics. 2010 Jul 15;26(14):1783-5. <http://www.ncbi.nlm.nih.gov/pubmed/20562416>`_
-
-
   </help>
+  
+  <citations>
+    <citation type="doi">10.1093/bioinformatics/btq281</citation>
+  </citations>
+  
 </tool>
--- a/tool_dependencies.xml	Thu Jan 23 12:30:55 2014 -0500
+++ b/tool_dependencies.xml	Tue Oct 13 12:43:20 2015 -0400
@@ -1,6 +1,6 @@
 <?xml version="1.0"?>
 <tool_dependency>
   <package name="galaxy_sequence_utils" version="1.0.0">
-      <repository changeset_revision="195699b1562a" name="package_galaxy_utils_1_0" owner="devteam" prior_installation_required="False" toolshed="http://testtoolshed.g2.bx.psu.edu" />
+      <repository changeset_revision="195699b1562a" name="package_galaxy_utils_1_0" owner="devteam" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>