Mercurial > repos > devteam > fasta_concatenate_by_species
comparison utils/maf_utilities.py @ 1:d9f0a11824e9
Add bx-python dependency (for maf_utilities.py).
author | Nate Coraor <nate@bx.psu.edu> |
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date | Mon, 17 Nov 2014 10:08:37 -0500 |
parents | a63b082a26eb |
children | c5311b7718d1 |
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0:a63b082a26eb | 1:d9f0a11824e9 |
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1 #!/usr/bin/env python | 1 #!/usr/bin/env python |
2 """ | 2 """ |
3 Provides wrappers and utilities for working with MAF files and alignments. | 3 Provides wrappers and utilities for working with MAF files and alignments. |
4 """ | 4 """ |
5 #Dan Blankenberg | 5 #Dan Blankenberg |
6 import pkg_resources; pkg_resources.require( "bx-python" ) | |
7 import bx.align.maf | 6 import bx.align.maf |
8 import bx.intervals | 7 import bx.intervals |
9 import bx.interval_index_file | 8 import bx.interval_index_file |
10 import sys, os, string, tempfile | 9 import sys, os, string, tempfile |
11 import logging | 10 import logging |