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changeset 2:3e33c6853fb2

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Added tool_dependencies.xml
author greg <greg@bx.psu.edu>
date Tue, 03 Jul 2012 14:31:50 -0400
parents a74a91f0ca4a
children 8ddad0c9a75a
files tool_dependencies.xml
diffstat 1 files changed, 28 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Tue Jul 03 14:31:50 2012 -0400
@@ -0,0 +1,28 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="emboss" version="5.0.0">
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url">ftp://emboss.open-bio.org/pub/EMBOSS/old/5.0.0/EMBOSS-5.0.0.tar.gz</action>
+                <action type="shell_command">./configure --without-x --prefix=$INSTALL_DIR</action>
+                <action type="shell_command">make</action>
+                <action type="shell_command">make install</action>
+            </actions>
+            <actions>
+                <action type="download_by_url">ftp://emboss.open-bio.org/pub/EMBOSS/old/5.0.0/PHYLIP-3.6b.tar.gz</action>
+                <action type="shell_command">./configure --without-x --prefix=$INSTALL_DIR</action>
+                <action type="shell_command">make</action>
+                <action type="shell_command">make install</action>
+            </actions>
+        </install>
+        <readme>
+These links provide information for building the Emboss package in most environments .
+
+System requirements
+http://emboss.sourceforge.net/download/#Requirements
+
+Platform-dependent notes
+http://emboss.sourceforge.net/download/#Platforms
+        </readme>
+    </package>
+</tool_dependency>