view emboss_multiple_outputfile_wrapper.pl @ 10:9b98d3d903c6 draft

planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/emboss_5 commit fc158bfe5f5927dc199321a2cf43310373cbc8ba

#! /usr/bin/perl -w
use strict;

my $cmd_string = join (" ",@ARGV);
my $results = `$cmd_string`;
my @files = split("\n",$results);
foreach my $thisLine (@files)
{
	if ($thisLine =~ /Created /)
	{
		$thisLine =~ /[\w|\.]+$/;
		$thisLine =$&;
		print "outfile: $thisLine\n";
	}
	else
	{
		print $thisLine,"\n";
	}
}