Mercurial > repos > devteam > emboss_5

diff emboss_multiple_outputfile_wrapper.pl @ 10:9b98d3d903c6 draft

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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/emboss_5 commit fc158bfe5f5927dc199321a2cf43310373cbc8ba
author devteam
date Fri, 12 Aug 2016 19:17:10 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/emboss_multiple_outputfile_wrapper.pl	Fri Aug 12 19:17:10 2016 -0400
@@ -0,0 +1,19 @@
+#! /usr/bin/perl -w
+use strict;
+
+my $cmd_string = join (" ",@ARGV);
+my $results = `$cmd_string`;
+my @files = split("\n",$results);
+foreach my $thisLine (@files)
+{
+	if ($thisLine =~ /Created /)
+	{
+		$thisLine =~ /[\w|\.]+$/;
+		$thisLine =$&;
+		print "outfile: $thisLine\n";
+	}
+	else
+	{
+		print $thisLine,"\n";
+	}
+}