Mercurial > repos > devteam > data_manager_sam_fasta_index_builder
annotate data_manager_conf.xml @ 10:6af5a435d20d draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sam_fasta_index_builder commit 096286097ed5cdf189a1b68c3fc34d10f4142e54
author | iuc |
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date | Sun, 16 Apr 2023 08:28:32 +0000 |
parents | e9b0c187700f |
children | fd3d48691203 |
rev | line source |
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0 | 1 <?xml version="1.0"?> |
2 <data_managers> | |
3 | |
10
6af5a435d20d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sam_fasta_index_builder commit 096286097ed5cdf189a1b68c3fc34d10f4142e54
iuc
parents:
0
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changeset
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4 <data_manager tool_file="data_manager/data_manager_sam_fasta_index_builder.xml" id="sam_fasta_index_builder"> |
0 | 5 <data_table name="fasta_indexes"> |
6 <output> | |
7 <column name="value" /> | |
8 <column name="dbkey" /> | |
9 <column name="name" /> | |
10 <column name="path" output_ref="out_file" > | |
11 <move type="directory" relativize_symlinks="True"> | |
12 <!-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base --> | |
13 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/sam_indexes/${value}</target> | |
14 </move> | |
15 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/sam_indexes/${value}/${path}</value_translation> | |
16 <value_translation type="function">abspath</value_translation> | |
17 </column> | |
18 </output> | |
19 </data_table> | |
20 </data_manager> | |
21 | |
22 </data_managers> |