comparison tool_data_table_conf.xml.sample @ 2:8de13c28d92e draft

planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734

1:e0839cffd009

<!-- Use the file tool_data_table_conf.xml.oldlocstyle if you don't want to update your loc files as changed in revision 4550:535d276c92bc-->
<tables>
    <!-- Locations of indexes in the Bowtie2 mapper format -->
    <table name="bowtie2_indexes" comment_char="#">
        <columns>value, dbkey, name, path</columns>
        <file path="tool-data/bowtie2_indices.loc" />
    </table>
</tables>

2:8de13c28d92e

<!-- Use the file tool_data_table_conf.xml.oldlocstyle if you don't want to update your loc files as changed in revision 4550:535d276c92bc-->
<tables>
    <!-- Locations of all fasta files under genome directory -->
    <table name="all_fasta" comment_char="#">
        <columns>value, dbkey, name, path</columns>
        <file path="tool-data/all_fasta.loc" />
    </table>
    <!-- Locations of indexes in the Bowtie2 mapper format -->
    <table name="bowtie2_indexes" comment_char="#">
        <columns>value, dbkey, name, path</columns>
        <file path="tool-data/bowtie2_indices.loc" />
    </table>
    <!-- Locations of indexes in the Bowtie2 mapper format for TopHat2 to use -->
    <table name="tophat2_indexes" comment_char="#">
        <columns>value, dbkey, name, path</columns>
        <file path="tool-data/tophat2_indices.loc" />
    </table>
</tables>