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changeset 1:8955a9521def draft

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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/bwa commit de7140295cce07e1bc1697e51dab4271c8d7a8a6
author devteam
date Fri, 18 Dec 2015 18:51:08 -0500
parents c9c78719ef26
children b4dfb5470bf3
files bwa-mem.xml bwa.xml bwa_macros.xml tool_dependencies.xml
diffstat 4 files changed, 6 insertions(+), 6 deletions(-) [+]
line wrap: on
line diff
--- a/bwa-mem.xml	Mon Nov 09 11:19:02 2015 -0500
+++ b/bwa-mem.xml	Fri Dec 18 18:51:08 2015 -0500
@@ -1,5 +1,5 @@
 <?xml version="1.0"?>
-<tool id="bwa_mem" name="Map with BWA-MEM" version="0.4.1">
+<tool id="bwa_mem" name="Map with BWA-MEM" version="0.4.2">
   <description>- map medium and long reads (&gt; 100 bp) against reference genome</description>
   <macros>
     <import>read_group_macros.xml</import>
--- a/bwa.xml	Mon Nov 09 11:19:02 2015 -0500
+++ b/bwa.xml	Fri Dec 18 18:51:08 2015 -0500
@@ -1,5 +1,5 @@
 <?xml version="1.0"?>
-<tool id="bwa" name="Map with BWA" version="0.4.1">
+<tool id="bwa" name="Map with BWA" version="0.4.2">
   <description>- map short reads (&lt; 100 bp) against reference genome</description>
   <macros>
     <import>read_group_macros.xml</import>
--- a/bwa_macros.xml	Mon Nov 09 11:19:02 2015 -0500
+++ b/bwa_macros.xml	Fri Dec 18 18:51:08 2015 -0500
@@ -17,7 +17,7 @@
 
   <xml name="requirements">
     <requirements>
-      <requirement type="package" version="0.7.10.039ea20639">bwa</requirement>
+      <requirement type="package" version="0.7.12">bwa</requirement>
       <requirement type="package" version="1.2">samtools</requirement>
     </requirements>
   </xml>
--- a/tool_dependencies.xml	Mon Nov 09 11:19:02 2015 -0500
+++ b/tool_dependencies.xml	Fri Dec 18 18:51:08 2015 -0500
@@ -1,9 +1,9 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="bwa" version="0.7.10.039ea20639">
-        <repository changeset_revision="1998f063e5ef" name="package_bwa_0_7_10_039ea20639" owner="devteam" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    <package name="bwa" version="0.7.12">
+        <repository changeset_revision="67aa12c8d449" name="package_bwa_0_7_12" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="samtools" version="1.2">
-        <repository changeset_revision="192f00129358" name="package_samtools_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="a55970300738" name="package_samtools_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
      </package>
 </tool_dependency>