Mercurial > repos > devteam > analyze_covariates
changeset 2:7af531c41dd7 draft default tip
Added a dependency on R, since the Analyze Covariates tool generates an R script for plotting residual error.
| author | devteam |
|---|---|
| date | Wed, 02 Apr 2014 16:03:58 -0400 |
| parents | e531148fb585 |
| children | |
| files | analyze_covariates.xml tool_dependencies.xml |
| diffstat | 2 files changed, 6 insertions(+), 2 deletions(-) [+] |
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--- a/analyze_covariates.xml Wed Apr 02 14:42:04 2014 -0400 +++ b/analyze_covariates.xml Wed Apr 02 16:03:58 2014 -0400 @@ -2,6 +2,7 @@ <description>- draw plots</description> <requirements> <requirement type="package" version="1.4">gatk</requirement> + <requirement type="package" version="2.11.0">R</requirement> </requirements> <macros> <import>gatk_macros.xml</import>
--- a/tool_dependencies.xml Wed Apr 02 14:42:04 2014 -0400 +++ b/tool_dependencies.xml Wed Apr 02 16:03:58 2014 -0400 @@ -1,6 +1,9 @@ <?xml version="1.0"?> <tool_dependency> - <package name="gatk" version="1.4"> - <repository changeset_revision="0cc94f66d00e" name="package_gatk_1_4" owner="devteam" prior_installation_required="False" toolshed="http://testtoolshed.g2.bx.psu.edu" /> + <package name="gatk" version="1.4"> + <repository changeset_revision="0cc94f66d00e" name="package_gatk_1_4" owner="devteam" toolshed="http://testtoolshed.g2.bx.psu.edu" /> + </package> + <package name="R" version="2.11.0"> + <repository changeset_revision="2c0a13200a73" name="package_r_2_11_0" owner="devteam" toolshed="http://testtoolshed.g2.bx.psu.edu" /> </package> </tool_dependency>