# HG changeset patch
# User devteam
# Date 1396469038 14400
# Node ID 7af531c41dd729a721f3fb70036acfaa45ab55c6
# Parent  e531148fb5851814426520d11d068dbce90f7d4b
Added a dependency on R, since the Analyze Covariates tool generates an R script for plotting residual error.

diff -r e531148fb585 -r 7af531c41dd7 analyze_covariates.xml
--- a/analyze_covariates.xml	Wed Apr 02 14:42:04 2014 -0400
+++ b/analyze_covariates.xml	Wed Apr 02 16:03:58 2014 -0400
@@ -2,6 +2,7 @@
   <description>- draw plots</description>
   <requirements>
       <requirement type="package" version="1.4">gatk</requirement>
+      <requirement type="package" version="2.11.0">R</requirement>
   </requirements>
   <macros>
     <import>gatk_macros.xml</import>
diff -r e531148fb585 -r 7af531c41dd7 tool_dependencies.xml
--- a/tool_dependencies.xml	Wed Apr 02 14:42:04 2014 -0400
+++ b/tool_dependencies.xml	Wed Apr 02 16:03:58 2014 -0400
@@ -1,6 +1,9 @@
 <?xml version="1.0"?>
 <tool_dependency>
-  <package name="gatk" version="1.4">
-      <repository changeset_revision="0cc94f66d00e" name="package_gatk_1_4" owner="devteam" prior_installation_required="False" toolshed="http://testtoolshed.g2.bx.psu.edu" />
+    <package name="gatk" version="1.4">
+        <repository changeset_revision="0cc94f66d00e" name="package_gatk_1_4" owner="devteam" toolshed="http://testtoolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="R" version="2.11.0">
+        <repository changeset_revision="2c0a13200a73" name="package_r_2_11_0" owner="devteam" toolshed="http://testtoolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>