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annotate fixedValueColumn.xml @ 1:4c6ec423baae draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/add_value commit 4066016ffafd7918ba9826db4f3c6fb41315e942
author devteam
date Fri, 29 Sep 2023 15:06:25 +0000
parents 787fa5c2c738
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1 <tool id="addValue" name="Add column" version="1.0.1" profile="16.04">
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2 <description>to an existing dataset</description>
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3 <requirements>
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4 <requirement type="package" version="5.26">perl</requirement>
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5 </requirements>
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6 <command>
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7 perl $__tool_directory__/fixedValueColumn.pl
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8 "${input}"
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9 "${out_file1}"
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10 "${exp}"
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11 "${iterate}"
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12 </command>
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13 <inputs>
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14 <param name="exp" type="text" value="1" label="Add this value"/>
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15 <param format="tabular" name="input" type="data" label="to Dataset" help="Dataset missing? See TIP below" />
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16 <param name="iterate" type="select" label="Iterate?">
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17 <option value="no">NO</option>
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18 <option value="yes">YES</option>
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19 </param>
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20 </inputs>
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21 <outputs>
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22 <data name="out_file1" format_source="input"/>
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23 </outputs>
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24 <tests>
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25 <test>
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26 <param name="exp" value="1"/>
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27 <param name="input" value="1.bed"/>
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28 <param name="iterate" value="no"/>
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29 <output name="out_file1" file="eq-addvalue.dat"/>
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30 </test>
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31 </tests>
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32 <help>
0
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34 .. class:: infomark
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36 **TIP:** If your data is not TAB delimited, use *Text Manipulation-&gt;Convert*
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38 -----
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40 **What it does**
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42 You can enter any value and it will be added as a new column to your dataset
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44 -----
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46 **Example**
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48 If you original data looks like this::
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50 chr1 10 100 geneA
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51 chr2 200 300 geneB
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52 chr2 400 500 geneC
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53
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54 Typing **+** in the text box will generate::
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56 chr1 10 100 geneA +
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57 chr2 200 300 geneB +
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58 chr2 400 500 geneC +
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61 You can also add line numbers by selecting **Iterate: YES**. In this case if you enter **1** in the text box you will get::
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63 chr1 10 100 geneA 1
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64 chr2 200 300 geneB 2
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65 chr2 400 500 geneC 3
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66
1
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67 </help>
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68 </tool>
0
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