Mercurial > repos > deepakjadmin > rcpp_edger_limma_test3

changeset 1:3e852cd7f528 draft

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Deleted selected files
author deepakjadmin
date Thu, 24 Sep 2015 03:28:34 -0400
parents 6bca60a11948
children 277c17414f17
files rtest.xml
diffstat 1 files changed, 0 insertions(+), 23 deletions(-) [+]
line wrap: on
line diff
--- a/rtest.xml	Thu Sep 24 03:03:08 2015 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,23 +0,0 @@
-<tool id="djvytfdgkdls" name="R 3.2.0 test" version="1.0.0">
-  <description>R version and installation test</description>
-<requirements>
-     <requirement type="set_environment">R_ROOT_DIR</requirement>
-    <requirement type="package" version="3.2.0">R</requirement>
-    <requirement type="package" version="3.24.12">limma</requirement>
-</requirements>
-  <command>   	 GALAXY_ROOT_DIR=`pwd`; 
-  		 echo \$GALAXY_ROOT_DIR &gt; $log 2 &gt;&amp;1;
-                 cd ../../../../;
-                 GALAXY_ROOT_DIR=`pwd`;
-                 echo \$GALAXY_ROOT_DIR &gt; $log 2 &gt;&amp;1;
-                 \$R_ROOT_DIR/bin/Rscript \${GALAXY_ROOT_DIR}/tools/toop2/test.R $output  &gt; $log 2 &gt;&amp;1
-   </command>
-  <outputs>
-    <data type="data" name="output" label ="outputfile" />
-    <data type="text" name="log" label ="packages loaded" />
-  </outputs>
-  <help>
- 
-  </help>
-</tool>
-