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3 <title>MayaChemTools:Documentation:PeriodicTable.pm</title>
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14 <table width="100%" border=0 cellpadding=0 cellspacing=2>
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15 <tr align="left" valign="top"><td width="33%" align="left"><a href="./PDBFileUtil.html" title="PDBFileUtil.html">Previous</a> <a href="./index.html" title="Table of Contents">TOC</a> <a href="./PseudoHeap.html" title="PseudoHeap.html">Next</a></td><td width="34%" align="middle"><strong>PeriodicTable.pm</strong></td><td width="33%" align="right"><a href="././code/PeriodicTable.html" title="View source code">Code</a> | <a href="./../pdf/PeriodicTable.pdf" title="PDF US Letter Size">PDF</a> | <a href="./../pdfgreen/PeriodicTable.pdf" title="PDF US Letter Size with narrow margins: www.changethemargins.com">PDFGreen</a> | <a href="./../pdfa4/PeriodicTable.pdf" title="PDF A4 Size">PDFA4</a> | <a href="./../pdfa4green/PeriodicTable.pdf" title="PDF A4 Size with narrow margins: www.changethemargins.com">PDFA4Green</a></td></tr>
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16 </table>
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17 </div>
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18 <p>
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19 </p>
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20 <h2>NAME</h2>
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21 <p>PeriodicTable</p>
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22 <p>
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23 </p>
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24 <h2>SYNOPSIS</h2>
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25 <p>use PeriodicTable;</p>
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26 <p>use PeriodicTable qw(:all);</p>
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27 <p>
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28 </p>
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29 <h2>DESCRIPTION</h2>
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30 <p><strong>PeriodicTable</strong> module provides the following functions:</p>
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31 <p> <a href="#getelementmostabundantnaturalisotopedata">GetElementMostAbundantNaturalIsotopeData</a>
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32 , <a href="#getelementmostabundantnaturalisotopemass">GetElementMostAbundantNaturalIsotopeMass</a>
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33 , <a href="#getelementmostabundantnaturalisotopemassnumber">GetElementMostAbundantNaturalIsotopeMassNumber</a>, <a href="#getelementnaturalisotopeabundance">GetElementNaturalIsotopeAbundance</a>
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34 , <a href="#getelementnaturalisotopecount">GetElementNaturalIsotopeCount</a>, <a href="#getelementnaturalisotopemass">GetElementNaturalIsotopeMass</a>
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35 , <a href="#getelementnaturalisotopesdata">GetElementNaturalIsotopesData</a>, <a href="#getelementpropertiesdata">GetElementPropertiesData</a>
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36 , <a href="#getelementpropertiesnames">GetElementPropertiesNames</a>, <a href="#getelementpropertiesnamesandunits">GetElementPropertiesNamesAndUnits</a>
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37 , <a href="#getelementpropertyunits">GetElementPropertyUnits</a>, <a href="#getelements">GetElements</a>, <a href="#getelementsbyamericanstylegrouplabel">GetElementsByAmericanStyleGroupLabel</a>
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38 , <a href="#getelementsbyeuropeanstylegrouplabel">GetElementsByEuropeanStyleGroupLabel</a>, <a href="#getelementsbygroupname">GetElementsByGroupName</a>
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39 , <a href="#getelementsbygroupnumber">GetElementsByGroupNumber</a>, <a href="#getelementsbyperiodnumber">GetElementsByPeriodNumber</a>
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40 , <a href="#getiupacgroupnumberfromamericanstylegrouplabel">GetIUPACGroupNumberFromAmericanStyleGroupLabel</a>
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41 , <a href="#getiupacgroupnumberfromeuropeanstylegrouplabel">GetIUPACGroupNumberFromEuropeanStyleGroupLabel</a>, <a href="#iselement">IsElement</a>
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42 , <a href="#iselementnaturalisotopemassnumber">IsElementNaturalIsotopeMassNumber</a>, <a href="#iselementproperty">IsElementProperty</a>
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43 </p><p>
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44 </p>
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45 <h2>METHODS</h2>
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46 <dl>
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47 <dt><strong><a name="getelements" class="item"><strong>GetElements</strong></a></strong></dt>
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48 <dd>
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49 <div class="OptionsBox">
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50 @ElementSymbols = GetElements();
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51 <br/> $ElementSymbolsRef = GetElements();</div>
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52 <p>Returns an array or a reference to an array of known element symbols</p>
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53 </dd>
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54 <dt><strong><a name="getelementsbygroupname" class="item"><strong>GetElementsByGroupName</strong></a></strong></dt>
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55 <dd>
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56 <div class="OptionsBox">
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57 @ElementSymbols = GetElementsByGroupName($GroupName);
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58 <br/> $ElementSymbolsRef = GetElementsByGroupName($GroupName);</div>
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59 <p>Returns an array or a reference to an array of element symbols for a specified <em>GroupName</em>.
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60 Supported <em>GroupName</em> values are: <em>Alkali metals, Alkaline earth metals, Coinage metals, Pnictogens,
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61 Chalcogens, Halogens, Noble gases</em>; Additionally, usage of <em>Lanthanides</em> (Lanthanoids)
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62 and <em>Actinides</em> (Actinoids) is also supported.</p>
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63 </dd>
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64 <dt><strong><a name="getelementsbygroupnumber" class="item"><strong>GetElementsByGroupNumber</strong></a></strong></dt>
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65 <dd>
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66 <div class="OptionsBox">
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67 @ElementSymbols = GetElementsByGroupNumber($GroupNumber);
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68 <br/> $ElementSymbolsRef = GetElementsByGroupNumber($GroupNumber);</div>
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69 <p>Returns an array or a reference to an array of element symbols for a specified <em>GroupNumber</em></p>
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70 </dd>
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71 <dt><strong><a name="getelementsbyamericanstylegrouplabel" class="item"><strong>GetElementsByAmericanStyleGroupLabel</strong></a></strong></dt>
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72 <dd>
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73 <div class="OptionsBox">
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74 @ElementSymbols = GetElementsByAmericanStyleGroupLabel($GroupLabel);
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75 <br/> $ElementSymbolsRef = GetElementsByAmericanStyleGroupLabel($GroupLabel);</div>
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76 <p>Returns an array or a reference to an array of element symbols for a specified American
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77 style <em>GroupLabel</em>. Valid values for Amercian style group labels: <em>IA to VIIIA, IB to VIIIB, VIII</em>.</p>
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78 </dd>
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79 <dt><strong><a name="getelementsbyeuropeanstylegrouplabel" class="item"><strong>GetElementsByEuropeanStyleGroupLabel</strong></a></strong></dt>
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80 <dd>
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81 <div class="OptionsBox">
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82 @ElementSymbols = GetElementsByEuropeanStyleGroupLabel($GroupLabel);
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83 <br/> $ElementSymbolsRef = GetElementsByEuropeanStyleGroupLabel($GroupLabel);</div>
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84 <p>Returns an array or a reference to an array of element symbols for a specified European
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85 style <em>GroupLabel</em>. Valid values for European style group labels: <em>IA to VIIIA, IB to VIIIB, VIII</em>.</p>
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86 </dd>
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87 <dt><strong><a name="getelementsbyperiodnumber" class="item"><strong>GetElementsByPeriodNumber</strong></a></strong></dt>
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88 <dd>
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89 <div class="OptionsBox">
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90 @ElementSymbols = GetElementsByPeriodNumber($PeriodNumber);
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91 <br/> $ElementSymbolsRef = GetElementsByPeriodNumber($PeriodNumber);</div>
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92 <p>Returns an array or a reference to an array of element symbols for a specified <em>PeriodNumber</em>.</p>
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93 </dd>
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94 <dt><strong><a name="getelementmostabundantnaturalisotopedata" class="item"><strong>GetElementMostAbundantNaturalIsotopeData</strong></a></strong></dt>
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95 <dd>
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96 <div class="OptionsBox">
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97 @IsotopeData = GetElementMostAbundantNaturalIsotopeData(
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98 $ElementID);
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99 <br/> $IsotopeDataRef = GetElementMostAbundantNaturalIsotopeData(
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100 $ElementID);</div>
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101 <p>Returns an array or reference to an array containing data for most abundant isotope of
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102 an element specfied by element symbol or atomic number. Isotope data arrays contain these
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103 values: <em>AtomicNumber, IsotopeSymbol, MassNumber, RelativeAtomicMass, and NaturalAbundance</em>.</p>
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104 </dd>
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105 <dt><strong><a name="getelementmostabundantnaturalisotopemassnumber" class="item"><strong>GetElementMostAbundantNaturalIsotopeMassNumber</strong></a></strong></dt>
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106 <dd>
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107 <div class="OptionsBox">
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108 $MassNumber = GetElementMostAbundantNaturalIsotopeMassNumber($ElementID);</div>
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109 <p>Returns mass number of most abundant natural isotope of an element specfied by element
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110 symbol or atomic number</p>
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111 </dd>
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112 <dt><strong><a name="getelementnaturalisotopecount" class="item"><strong>GetElementNaturalIsotopeCount</strong></a></strong></dt>
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113 <dd>
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114 <div class="OptionsBox">
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115 $IsotopeCount = GetElementNaturalIsotopeCount($ElementID);</div>
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116 <p>Returns natural isotope count for an element specfied by element symbol or
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117 atomic number</p>
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118 </dd>
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119 <dt><strong><a name="getelementnaturalisotopesdata" class="item"><strong>GetElementNaturalIsotopesData</strong></a></strong></dt>
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120 <dd>
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121 <div class="OptionsBox">
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122 $DataHashRef = GetElementNaturalIsotopesData($ElementID,
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123 [$MassNumber]);</div>
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124 <p>Reurns a reference to a hash containingall available isotope data for an element specified
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125 using element symbol or aromic number; an optional mass number indicates retrieve data
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126 for a specific isotope</p>
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127 </dd>
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128 <dt><strong><a name="getelementnaturalisotopeabundance" class="item"><strong>GetElementNaturalIsotopeAbundance</strong></a></strong></dt>
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129 <dd>
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130 <div class="OptionsBox">
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131 $Abundance = GetElementNaturalIsotopeAbundance($ElementID,
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132 $MassNumber);</div>
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133 <p>Returns percent abundance of natural isotope for an element with specfic mass
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134 number.</p>
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135 </dd>
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136 <dt><strong><a name="getelementmostabundantnaturalisotopemass" class="item"><strong>GetElementMostAbundantNaturalIsotopeMass</strong></a></strong></dt>
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137 <dd>
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138 <div class="OptionsBox">
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139 $RelativeAtomicMass = GetElementMostAbundantNaturalIsotopeMass(
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140 $ElementID);</div>
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141 <p>Returns relative atomic mass of most abundant isotope for an element specified using
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142 element symbol or aromic number.</p>
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143 </dd>
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144 <dt><strong><a name="getelementnaturalisotopemass" class="item"><strong>GetElementNaturalIsotopeMass</strong></a></strong></dt>
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145 <dd>
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146 <div class="OptionsBox">
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147 $RelativeAtomicMass = GetElementNaturalIsotopeMass($ElementID,
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148 $MassNumber);</div>
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149 <p>Returns relative atomic mass of an element with specfic mass number.</p>
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150 </dd>
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151 <dt><strong><a name="getelementpropertiesdata" class="item"><strong>GetElementPropertiesData</strong></a></strong></dt>
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152 <dd>
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153 <div class="OptionsBox">
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154 $PropertyDataHashRef = GetElementPropertiesData($ElementID);</div>
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155 <p>Returns a reference to a hash containing all available properties data for an element
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156 specified using element symbol or atomic number.</p>
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157 </dd>
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158 <dt><strong><a name="getelementpropertyname" class="item"><strong>GetElementPropertyName</strong></a></strong></dt>
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159 <dd>
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160 <div class="OptionsBox">
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161 $PropertyValue = GetElement<PropertyName>($ElementID);</div>
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162 <p>Returns value of an element for a element specified using element symbol or atomic number.</p>
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163 <p>These functions are not defined in this modules; these are implemented on-the-fly using
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164 Perl's AUTOLOAD funcionality.</p>
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165 <p>Here is the list of known element <em>property names</em>: AllenElectronegativity,
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166 AllredRochowElectronegativity, AtomicNumber, AtomicRadiusCalculated,
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167 AtomicRadiusEmpirical, AtomicWeight, Block, BoilingPoint, BondLength,
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168 BrinellHardness, BulkModulus, Classification, CoefficientOfLinearExpansion, Color,
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169 CommonValences, LowestCommonValence, HighestCommonValence,
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170 CommonOxidationNumbers, LowestCommonOxidationNumber, HighestCommonOxidationNumber,
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171 CovalentRadiusEmpirical, CriticalTemperature, DensityOfSolid, DiscoveredAt, DiscoveredBy,
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172 DiscoveredWhen, ElectricalResistivity, ElectronAffinity, ElementName, ElementSymbol, EnthalpyOfAtmization,
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173 EnthalpyOfFusion, EnthalpyOfVaporization, FirstIonizationEnergy, GroundStateConfiguration, GroundStateLevel,
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174 GroupName, GroupNumber, NaturalIsotopeData, MeltingPoint, MineralHardness, MolarVolume,
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175 MullikenJaffeElectronegativity, OriginOfName, PaulingElectronegativity, PeriodNumber, PoissonsRatio,
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176 Reflectivity, RefractiveIndex, RigidityModulus, SandersonElectronegativity, StandardState,
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177 SuperconductionTemperature, ThermalConductivity, VanderWaalsRadius, VelocityOfSound, VickersHardness,
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178 YoungsModulus.</p>
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179 </dd>
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180 <dt><strong><a name="getelementpropertiesnames" class="item"><strong>GetElementPropertiesNames</strong></a></strong></dt>
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181 <dd>
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182 <div class="OptionsBox">
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183 @PropertyNames = GetElementPropertiesNames([$Mode]);
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184 <br/> $PropertyNamesRef = GetElementPropertiesNames([$Mode]);</div>
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185 <p>Returns names of all available element properties. Optional mode parameter controls
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186 grouping of property names; Possible values: <em>ByGroup or Alphabetical</em>. Default:
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187 <em>ByGroup</em>.</p>
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188 </dd>
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189 <dt><strong><a name="getelementpropertiesnamesandunits" class="item"><strong>GetElementPropertiesNamesAndUnits</strong></a></strong></dt>
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190 <dd>
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191 <div class="OptionsBox">
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192 $NameUnitsHashRef = GetElementPropertiesNamesAndUnits();</div>
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193 <p>Returns a reference to a hash of property names and units of all available element
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194 properties. Names with no units contains empty strings.</p>
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195 </dd>
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196 <dt><strong><a name="getelementpropertyunits" class="item"><strong>GetElementPropertyUnits</strong></a></strong></dt>
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197 <dd>
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198 <div class="OptionsBox">
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199 $Units = GetElementPropertyUnits($PropertyName);</div>
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200 <p>Returns units for a specific element property name. An empty string is returned for
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201 a property with no units.</p>
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202 </dd>
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203 <dt><strong><a name="getiupacgroupnumberfromamericanstylegrouplabel" class="item"><strong>GetIUPACGroupNumberFromAmericanStyleGroupLabel</strong></a></strong></dt>
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204 <dd>
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205 <div class="OptionsBox">
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206 $GroupNumber = GetIUPACGroupNumberFromAmericanStyleGroupLabel(
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207 $GroupLabel);</div>
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208 <p>Returns IUPAC group numbers of a specific American style group label. A comma delimited
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209 string is returned for group VIII or VIIIB.</p>
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210 </dd>
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211 <dt><strong><a name="getiupacgroupnumberfromeuropeanstylegrouplabel" class="item"><strong>GetIUPACGroupNumberFromEuropeanStyleGroupLabel</strong></a></strong></dt>
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212 <dd>
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213 <div class="OptionsBox">
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214 $GroupNumber = GetIUPACGroupNumberFromEuropeanStyleGroupLabel(
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215 $GroupLabel);</div>
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216 <p>Returns IUPAC group numbers of a specific European style group label. A comma delimited
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217 string is returned for group VIII or VIIIA.</p>
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218 </dd>
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219 <dt><strong><a name="iselement" class="item"><strong>IsElement</strong></a></strong></dt>
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220 <dd>
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221 <div class="OptionsBox">
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222 $Status = IsElement($ElementID);</div>
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223 <p>Returns 1 or 0 based on whether it's a known element symbol or atomic number.</p>
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224 </dd>
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225 <dt><strong><a name="iselementnaturalisotopemassnumber" class="item"><strong>IsElementNaturalIsotopeMassNumber</strong></a></strong></dt>
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226 <dd>
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227 <div class="OptionsBox">
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228 $Status = IsElementNaturalIsotopeMassNumber($ElementID, $MassNumber);</div>
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229 <p>Returns 1 or 0 based on whether it's a valid mass number for an element symbol
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230 or atomic number.</p>
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231 </dd>
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232 <dt><strong><a name="iselementproperty" class="item"><strong>IsElementProperty</strong></a></strong></dt>
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233 <dd>
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234 <div class="OptionsBox">
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235 $Status = IsElementProperty($PropertyName);</div>
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236 <p>Returns 1 or 0 based on whether it's a valid property name.</p>
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237 </dd>
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238 </dl>
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239 <p>
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240 </p>
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241 <h2>AUTHOR</h2>
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242 <p><a href="mailto:msud@san.rr.com">Manish Sud</a></p>
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243 <p>
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244 </p>
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245 <h2>SEE ALSO</h2>
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246 <p><a href="./AminoAcids.html">AminoAcids.pm</a>, <a href="./NucleicAcids.html">NucleicAcids.pm</a>
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247 </p>
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248 <p>
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249 </p>
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250 <h2>COPYRIGHT</h2>
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251 <p>Copyright (C) 2015 Manish Sud. All rights reserved.</p>
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252 <p>This file is part of MayaChemTools.</p>
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253 <p>MayaChemTools is free software; you can redistribute it and/or modify it under
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254 the terms of the GNU Lesser General Public License as published by the Free
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255 Software Foundation; either version 3 of the License, or (at your option)
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256 any later version.</p>
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257 <p> </p><p> </p><div class="DocNav">
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258 <table width="100%" border=0 cellpadding=0 cellspacing=2>
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259 <tr align="left" valign="top"><td width="33%" align="left"><a href="./PDBFileUtil.html" title="PDBFileUtil.html">Previous</a> <a href="./index.html" title="Table of Contents">TOC</a> <a href="./PseudoHeap.html" title="PseudoHeap.html">Next</a></td><td width="34%" align="middle"><strong>March 29, 2015</strong></td><td width="33%" align="right"><strong>PeriodicTable.pm</strong></td></tr>
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260 </table>
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261 </div>
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262 <br />
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263 <center>
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264 <img src="../../images/h2o2.png">
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265 </center>
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266 </body>
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267 </html>
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