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+++ b/docs/scripts/html/code/InfoFingerprintsFiles.html	Wed Jan 20 09:23:18 2016 -0500
@@ -0,0 +1,524 @@
+<html>
+<head>
+<title>MayaChemTools:Code:InfoFingerprintsFiles.pl</title>
+<meta http-equiv="content-type" content="text/html;charset=utf-8">
+<link rel="stylesheet" type="text/css" href="../../../css/MayaChemToolsCode.css">
+</head>
+<body leftmargin="20" rightmargin="20" topmargin="10" bottommargin="10">
+<br/>
+<center>
+<a href="http://www.mayachemtools.org" title="MayaChemTools Home"><img src="../../../images/MayaChemToolsLogo.gif" border="0" alt="MayaChemTools"></a>
+</center>
+<br/>
+<pre>
+   1 #!/usr/bin/perl -w
+   2 <span class="c">#</span>
+   3 <span class="c"># $RCSfile: InfoFingerprintsFiles.pl,v $</span>
+   4 <span class="c"># $Date: 2015/02/28 20:46:20 $</span>
+   5 <span class="c"># $Revision: 1.20 $</span>
+   6 <span class="c">#</span>
+   7 <span class="c"># Author: Manish Sud &lt;msud@san.rr.com&gt;</span>
+   8 <span class="c">#</span>
+   9 <span class="c"># Copyright (C) 2015 Manish Sud. All rights reserved.</span>
+  10 <span class="c">#</span>
+  11 <span class="c"># This file is part of MayaChemTools.</span>
+  12 <span class="c">#</span>
+  13 <span class="c"># MayaChemTools is free software; you can redistribute it and/or modify it under</span>
+  14 <span class="c"># the terms of the GNU Lesser General Public License as published by the Free</span>
+  15 <span class="c"># Software Foundation; either version 3 of the License, or (at your option) any</span>
+  16 <span class="c"># later version.</span>
+  17 <span class="c">#</span>
+  18 <span class="c"># MayaChemTools is distributed in the hope that it will be useful, but without</span>
+  19 <span class="c"># any warranty; without even the implied warranty of merchantability of fitness</span>
+  20 <span class="c"># for a particular purpose.  See the GNU Lesser General Public License for more</span>
+  21 <span class="c"># details.</span>
+  22 <span class="c">#</span>
+  23 <span class="c"># You should have received a copy of the GNU Lesser General Public License</span>
+  24 <span class="c"># along with MayaChemTools; if not, see &lt;http://www.gnu.org/licenses/&gt; or</span>
+  25 <span class="c"># write to the Free Software Foundation Inc., 59 Temple Place, Suite 330,</span>
+  26 <span class="c"># Boston, MA, 02111-1307, USA.</span>
+  27 <span class="c">#</span>
+  28 
+  29 <span class="k">use</span> <span class="w">strict</span><span class="sc">;</span>
+  30 <span class="k">use</span> <span class="w">FindBin</span><span class="sc">;</span> <span class="k">use</span> <span class="w">lib</span> <span class="q">&quot;$FindBin::Bin/../lib&quot;</span><span class="sc">;</span>
+  31 <span class="k">use</span> <span class="w">Getopt::Long</span><span class="sc">;</span>
+  32 <span class="k">use</span> <span class="w">File::Basename</span><span class="sc">;</span>
+  33 <span class="k">use</span> <span class="w">Text::ParseWords</span><span class="sc">;</span>
+  34 <span class="k">use</span> <span class="w">Benchmark</span><span class="sc">;</span>
+  35 <span class="k">use</span> <span class="w">FileUtil</span><span class="sc">;</span>
+  36 <span class="k">use</span> <span class="w">TextUtil</span><span class="sc">;</span>
+  37 <span class="k">use</span> <span class="w">Fingerprints::FingerprintsFileUtil</span><span class="sc">;</span>
+  38 <span class="k">use</span> <span class="w">Fingerprints::FingerprintsStringUtil</span><span class="sc">;</span>
+  39 
+  40 <span class="k">my</span><span class="s">(</span><span class="i">$ScriptName</span><span class="cm">,</span> <span class="i">%Options</span><span class="cm">,</span> <span class="i">$StartTime</span><span class="cm">,</span> <span class="i">$EndTime</span><span class="cm">,</span> <span class="i">$TotalTime</span><span class="s">)</span><span class="sc">;</span>
+  41 
+  42 <span class="c"># Autoflush STDOUT</span>
+  43 <span class="i">$|</span> = <span class="n">1</span><span class="sc">;</span>
+  44 
+  45 <span class="c"># Starting message...</span>
+  46 <span class="i">$ScriptName</span> = <span class="i">basename</span><span class="s">(</span><span class="i">$0</span><span class="s">)</span><span class="sc">;</span>
+  47 <span class="k">print</span> <span class="q">&quot;\n$ScriptName: Starting...\n\n&quot;</span><span class="sc">;</span>
+  48 <span class="i">$StartTime</span> = <span class="w">new</span> <span class="w">Benchmark</span><span class="sc">;</span>
+  49 
+  50 <span class="c"># Get the options and setup script...</span>
+  51 <span class="i">SetupScriptUsage</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+  52 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">help</span>} || <span class="i">@ARGV</span> &lt; <span class="n">1</span><span class="s">)</span> <span class="s">{</span>
+  53   <span class="k">die</span> <span class="i">GetUsageFromPod</span><span class="s">(</span><span class="q">&quot;$FindBin::Bin/$ScriptName&quot;</span><span class="s">)</span><span class="sc">;</span>
+  54 <span class="s">}</span>
+  55 
+  56 <span class="k">my</span><span class="s">(</span><span class="i">@FingerprintsFilesList</span><span class="s">)</span><span class="sc">;</span>
+  57 <span class="i">@FingerprintsFilesList</span> = <span class="i">ExpandFileNames</span><span class="s">(</span>\<span class="i">@ARGV</span><span class="cm">,</span> <span class="q">&quot;sdf sd fpf fp csv tsv&quot;</span><span class="s">)</span><span class="sc">;</span>
+  58 
+  59 <span class="c"># Process options...</span>
+  60 <span class="k">print</span> <span class="q">&quot;Processing options...\n&quot;</span><span class="sc">;</span>
+  61 <span class="k">my</span><span class="s">(</span><span class="i">%OptionsInfo</span><span class="s">)</span><span class="sc">;</span>
+  62 <span class="i">ProcessOptions</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+  63 
+  64 <span class="c"># Setup information about input files...</span>
+  65 <span class="k">print</span> <span class="q">&quot;Checking input fingerprints file(s)...\n&quot;</span><span class="sc">;</span>
+  66 <span class="k">my</span><span class="s">(</span><span class="i">%FingerprintsFilesInfo</span><span class="s">)</span><span class="sc">;</span>
+  67 <span class="i">RetrieveFingerprintsFilesInfo</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+  68 
+  69 <span class="c"># Process input files..</span>
+  70 <span class="k">my</span><span class="s">(</span><span class="i">$FileIndex</span><span class="s">)</span><span class="sc">;</span>
+  71 <span class="k">if</span> <span class="s">(</span><span class="i">@FingerprintsFilesList</span> &gt; <span class="n">1</span><span class="s">)</span> <span class="s">{</span>
+  72   <span class="k">print</span> <span class="q">&quot;\nProcessing fingerprints files...\n&quot;</span><span class="sc">;</span>
+  73 <span class="s">}</span>
+  74 <span class="k">for</span> <span class="i">$FileIndex</span> <span class="s">(</span><span class="n">0</span> .. <span class="i">$#FingerprintsFilesList</span><span class="s">)</span> <span class="s">{</span>
+  75   <span class="k">if</span> <span class="s">(</span><span class="i">$FingerprintsFilesInfo</span>{<span class="w">FileOkay</span>}[<span class="i">$FileIndex</span>]<span class="s">)</span> <span class="s">{</span>
+  76     <span class="k">print</span> <span class="q">&quot;\nProcessing file $FingerprintsFilesList[$FileIndex]...\n&quot;</span><span class="sc">;</span>
+  77     <span class="i">ListFingerprintsFileInfo</span><span class="s">(</span><span class="i">$FileIndex</span><span class="s">)</span><span class="sc">;</span>
+  78   <span class="s">}</span>
+  79 <span class="s">}</span>
+  80 <span class="i">ListTotalSizeOfFiles</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+  81 
+  82 <span class="k">print</span> <span class="q">&quot;\n$ScriptName:Done...\n\n&quot;</span><span class="sc">;</span>
+  83 
+  84 <span class="i">$EndTime</span> = <span class="w">new</span> <span class="w">Benchmark</span><span class="sc">;</span>
+  85 <span class="i">$TotalTime</span> = <span class="w">timediff</span> <span class="s">(</span><span class="i">$EndTime</span><span class="cm">,</span> <span class="i">$StartTime</span><span class="s">)</span><span class="sc">;</span>
+  86 <span class="k">print</span> <span class="q">&quot;Total time: &quot;</span><span class="cm">,</span> <span class="i">timestr</span><span class="s">(</span><span class="i">$TotalTime</span><span class="s">)</span><span class="cm">,</span> <span class="q">&quot;\n&quot;</span><span class="sc">;</span>
+  87 
+  88 <span class="c">###############################################################################</span>
+  89 
+  90 <span class="c"># List approptiate information...</span>
+  91 <span class="c">#</span>
+<a name="ListFingerprintsFileInfo-"></a>  92 <span class="k">sub </span><span class="m">ListFingerprintsFileInfo</span> <span class="s">{</span>
+  93   <span class="k">my</span><span class="s">(</span><span class="i">$FileIndex</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
+  94   <span class="k">my</span><span class="s">(</span><span class="i">$FileName</span><span class="cm">,</span> <span class="i">$FingerprintsFileIO</span><span class="cm">,</span> <span class="i">$InvalidFingerprintsFileData</span><span class="cm">,</span> <span class="i">$InvalidFingerprintsData</span><span class="cm">,</span> <span class="i">$DataEntryCount</span><span class="cm">,</span> <span class="i">$ValidDataEntryCount</span><span class="cm">,</span> <span class="i">$InvalidDataEntryCount</span><span class="cm">,</span> <span class="i">$MissingDataEntryCount</span><span class="cm">,</span> <span class="i">$BitVectorDataEntryCount</span><span class="cm">,</span> <span class="i">$VectorDataEntryCount</span><span class="cm">,</span> <span class="i">$FingerprintsObject</span><span class="cm">,</span> <span class="i">$FingerprintsType</span><span class="cm">,</span> <span class="i">$TotalBitDensity</span><span class="cm">,</span> <span class="i">$FileType</span><span class="cm">,</span> <span class="i">$DataEntryLabel</span><span class="s">)</span><span class="sc">;</span>
+  95 
+  96   <span class="i">$FileType</span> = <span class="i">$FingerprintsFilesInfo</span>{<span class="w">FileType</span>}[<span class="i">$FileIndex</span>]<span class="sc">;</span>
+  97   <span class="i">$DataEntryLabel</span> = <span class="s">(</span><span class="i">$FileType</span> =~ <span class="q">/^SD$/i</span><span class="s">)</span> ? <span class="q">&#39;compounds&#39;</span> <span class="co">:</span> <span class="q">&#39;lines&#39;</span><span class="sc">;</span>
+  98 
+  99   <span class="s">(</span><span class="i">$DataEntryCount</span><span class="cm">,</span> <span class="i">$ValidDataEntryCount</span><span class="cm">,</span> <span class="i">$InvalidDataEntryCount</span><span class="cm">,</span> <span class="i">$MissingDataEntryCount</span><span class="cm">,</span> <span class="i">$BitVectorDataEntryCount</span><span class="cm">,</span> <span class="i">$VectorDataEntryCount</span><span class="cm">,</span> <span class="i">$TotalBitDensity</span><span class="s">)</span> = <span class="s">(</span><span class="n">0</span><span class="s">)</span> x <span class="n">7</span><span class="sc">;</span>
+ 100 
+ 101   <span class="i">$FingerprintsFileIO</span> = <span class="i">Fingerprints::FingerprintsFileUtil::NewFingerprintsFileIO</span><span class="s">(</span><span class="i">%</span>{<span class="i">$FingerprintsFilesInfo</span>{<span class="w">FingerprintsFileIOParameters</span>}[<span class="i">$FileIndex</span>]}<span class="s">)</span><span class="sc">;</span>
+ 102   <span class="i">$FingerprintsFileIO</span><span class="i">-&gt;Open</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 103 
+ 104   <span class="i">$InvalidFingerprintsFileData</span> = <span class="i">$FingerprintsFileIO</span><span class="i">-&gt;IsFingerprintsFileDataValid</span><span class="s">(</span><span class="s">)</span> ? <span class="n">0</span> <span class="co">:</span> <span class="n">1</span><span class="sc">;</span>
+ 105 
+ 106   <span class="j">FINGERPRINTS:</span> <span class="k">while</span> <span class="s">(</span><span class="i">$FingerprintsFileIO</span><span class="i">-&gt;Read</span><span class="s">(</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
+ 107     <span class="i">$DataEntryCount</span>++<span class="sc">;</span>
+ 108 
+ 109     <span class="c"># Missing data...</span>
+ 110     <span class="k">if</span> <span class="s">(</span><span class="i">$InvalidFingerprintsFileData</span><span class="s">)</span> <span class="s">{</span>
+ 111       <span class="i">$MissingDataEntryCount</span>++<span class="sc">;</span>
+ 112       <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ValidateData</span>} || <span class="i">$OptionsInfo</span>{<span class="w">CountEmptyFingerprints</span>}<span class="s">)</span> <span class="s">{</span>
+ 113         <span class="i">ListEmptyOrInvalidFingerprintsDataInfo</span><span class="s">(</span><span class="q">&#39;EmptyData&#39;</span><span class="cm">,</span> <span class="i">$FingerprintsFileIO</span><span class="cm">,</span> <span class="i">$FileType</span><span class="s">)</span><span class="sc">;</span>
+ 114       <span class="s">}</span>
+ 115       <span class="k">next</span> <span class="j">FINGERPRINTS</span><span class="sc">;</span>
+ 116     <span class="s">}</span>
+ 117     <span class="i">$InvalidFingerprintsData</span> = <span class="i">$FingerprintsFileIO</span><span class="i">-&gt;IsFingerprintsDataValid</span><span class="s">(</span><span class="s">)</span> ? <span class="n">0</span> <span class="co">:</span> <span class="n">1</span><span class="sc">;</span>
+ 118 
+ 119     <span class="c"># Invalid data...</span>
+ 120     <span class="k">if</span> <span class="s">(</span><span class="i">$InvalidFingerprintsData</span><span class="s">)</span> <span class="s">{</span>
+ 121       <span class="i">$InvalidDataEntryCount</span>++<span class="sc">;</span>
+ 122       <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ValidateData</span>}<span class="s">)</span> <span class="s">{</span>
+ 123         <span class="i">ListEmptyOrInvalidFingerprintsDataInfo</span><span class="s">(</span><span class="q">&#39;InvalidData&#39;</span><span class="cm">,</span> <span class="i">$FingerprintsFileIO</span><span class="cm">,</span> <span class="i">$FileType</span><span class="s">)</span><span class="sc">;</span>
+ 124       <span class="s">}</span>
+ 125       <span class="k">next</span> <span class="j">FINGERPRINTS</span><span class="sc">;</span>
+ 126     <span class="s">}</span>
+ 127     <span class="i">$ValidDataEntryCount</span>++<span class="sc">;</span>
+ 128 
+ 129     <span class="i">$FingerprintsObject</span> = <span class="i">$FingerprintsFileIO</span><span class="i">-&gt;GetFingerprints</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 130     <span class="i">$FingerprintsType</span> = <span class="i">$FingerprintsObject</span><span class="i">-&gt;GetVectorType</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 131 
+ 132     <span class="k">if</span> <span class="s">(</span><span class="i">$FingerprintsType</span> =~ <span class="q">/^FingerprintsBitVector$/i</span><span class="s">)</span> <span class="s">{</span>
+ 133       <span class="i">$BitVectorDataEntryCount</span>++<span class="sc">;</span>
+ 134       <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ListAverageBitDensity</span>}<span class="s">)</span> <span class="s">{</span>
+ 135         <span class="i">$TotalBitDensity</span> += <span class="i">$FingerprintsObject</span><span class="i">-&gt;GetFingerprintsBitDensity</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 136       <span class="s">}</span>
+ 137     <span class="s">}</span>
+ 138     <span class="k">elsif</span> <span class="s">(</span><span class="i">$FingerprintsType</span> =~ <span class="q">/^FingerprintsVector$/i</span><span class="s">)</span> <span class="s">{</span>
+ 139       <span class="i">$VectorDataEntryCount</span>++<span class="sc">;</span>
+ 140     <span class="s">}</span>
+ 141 
+ 142     <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsDataEntryInfo</span>}<span class="s">)</span> <span class="s">{</span>
+ 143       <span class="i">ListFingerprintsDataEntryInfo</span><span class="s">(</span><span class="i">$FingerprintsFileIO</span><span class="cm">,</span> <span class="i">$FileType</span><span class="s">)</span><span class="sc">;</span>
+ 144     <span class="s">}</span>
+ 145 
+ 146   <span class="s">}</span>
+ 147   <span class="i">$FingerprintsFileIO</span><span class="i">-&gt;Close</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 148 
+ 149   <span class="k">print</span> <span class="q">&quot;\nFingerprints file type: $FileType\n&quot;</span><span class="sc">;</span>
+ 150   <span class="k">if</span> <span class="s">(</span><span class="i">$FileType</span> =~ <span class="q">/^SD$/i</span><span class="s">)</span> <span class="s">{</span>
+ 151     <span class="k">print</span> <span class="q">&quot;Number of compounds: $DataEntryCount\n&quot;</span><span class="sc">;</span>
+ 152   <span class="s">}</span>
+ 153   <span class="k">else</span> <span class="s">{</span>
+ 154     <span class="k">print</span> <span class="q">&quot;Number of data lines: $DataEntryCount\n&quot;</span><span class="sc">;</span>
+ 155   <span class="s">}</span>
+ 156 
+ 157   <span class="i">ListFileTypeHeaderInfo</span><span class="s">(</span><span class="i">$FingerprintsFileIO</span><span class="cm">,</span> <span class="i">$FileType</span><span class="s">)</span><span class="sc">;</span>
+ 158 
+ 159   <span class="k">print</span> <span class="q">&quot;\nNumber of $DataEntryLabel with valid fingerprints string data: $ValidDataEntryCount\n&quot;</span><span class="sc">;</span>
+ 160   <span class="k">print</span> <span class="q">&quot;Number of $DataEntryLabel with bit-vector fingerprints string data: $BitVectorDataEntryCount\n&quot;</span><span class="sc">;</span>
+ 161   <span class="k">print</span> <span class="q">&quot;Number of $DataEntryLabel with vector fingerprints string data: $VectorDataEntryCount\n&quot;</span><span class="sc">;</span>
+ 162 
+ 163   <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">CountEmptyFingerprints</span>}<span class="s">)</span> <span class="s">{</span>
+ 164     <span class="k">print</span> <span class="q">&quot;Number of $DataEntryLabel with missing fingerprints data: $MissingDataEntryCount\n&quot;</span><span class="sc">;</span>
+ 165     <span class="k">print</span> <span class="q">&quot;Number of $DataEntryLabel with invalid fingerprints data: $InvalidDataEntryCount\n&quot;</span><span class="sc">;</span>
+ 166   <span class="s">}</span>
+ 167 
+ 168   <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ListAverageBitDensity</span>} &amp;&amp; <span class="i">$BitVectorDataEntryCount</span><span class="s">)</span> <span class="s">{</span>
+ 169     <span class="k">my</span><span class="s">(</span><span class="i">$AverageBitDensity</span><span class="s">)</span><span class="sc">;</span>
+ 170     <span class="i">$AverageBitDensity</span> = <span class="i">$TotalBitDensity</span>/<span class="i">$BitVectorDataEntryCount</span><span class="sc">;</span>
+ 171     <span class="i">$AverageBitDensity</span> = <span class="k">sprintf</span><span class="s">(</span><span class="q">&quot;%.2f&quot;</span><span class="cm">,</span> <span class="i">$AverageBitDensity</span><span class="s">)</span> + <span class="n">0</span><span class="sc">;</span>
+ 172     <span class="k">print</span> <span class="q">&quot;\nAverage bit density: $AverageBitDensity\n&quot;</span><span class="sc">;</span>
+ 173   <span class="s">}</span>
+ 174 
+ 175 
+ 176   <span class="c"># File size and modification information...</span>
+ 177   <span class="k">print</span> <span class="q">&quot;\nFile size: &quot;</span><span class="cm">,</span> <span class="i">FormatFileSize</span><span class="s">(</span><span class="i">$FingerprintsFilesInfo</span>{<span class="w">FileSize</span>}[<span class="i">$FileIndex</span>]<span class="s">)</span><span class="cm">,</span> <span class="q">&quot; \n&quot;</span><span class="sc">;</span>
+ 178   <span class="k">print</span> <span class="q">&quot;Last modified: &quot;</span><span class="cm">,</span> <span class="i">$FingerprintsFilesInfo</span>{<span class="w">FileLastModified</span>}[<span class="i">$FileIndex</span>]<span class="cm">,</span> <span class="q">&quot; \n&quot;</span><span class="sc">;</span>
+ 179 <span class="s">}</span>
+ 180 
+ 181 <span class="c"># List empty or invalid fingerprints file data information...</span>
+ 182 <span class="c">#</span>
+<a name="ListEmptyOrInvalidFingerprintsDataInfo-"></a> 183 <span class="k">sub </span><span class="m">ListEmptyOrInvalidFingerprintsDataInfo</span> <span class="s">{</span>
+ 184   <span class="k">my</span><span class="s">(</span><span class="i">$Mode</span><span class="cm">,</span> <span class="i">$FingerprintsFileIO</span><span class="cm">,</span> <span class="i">$FileType</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
+ 185   <span class="k">my</span><span class="s">(</span><span class="i">$ModeInfo</span><span class="s">)</span><span class="sc">;</span>
+ 186 
+ 187   <span class="i">$ModeInfo</span> = <span class="s">(</span><span class="i">$Mode</span> =~ <span class="q">/^EmptyData$/i</span><span class="s">)</span> ? <span class="q">&quot;no&quot;</span> <span class="co">:</span> <span class="q">&quot;invalid&quot;</span><span class="sc">;</span>
+ 188 
+ 189   <span class="k">if</span> <span class="s">(</span><span class="i">$FileType</span> =~ <span class="q">/^SD$/i</span><span class="s">)</span> <span class="s">{</span>
+ 190     <span class="k">my</span><span class="s">(</span><span class="i">$CmpdNum</span><span class="cm">,</span> <span class="i">$CmpdString</span><span class="s">)</span><span class="sc">;</span>
+ 191 
+ 192     <span class="i">$CmpdNum</span> = <span class="i">$FingerprintsFileIO</span><span class="i">-&gt;GetCompoundNum</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 193     <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">DetailLevel</span>} &gt;= <span class="n">3</span> <span class="s">)</span> <span class="s">{</span>
+ 194       <span class="i">$CmpdString</span> = <span class="i">$FingerprintsFileIO</span><span class="i">-&gt;GetCompoundString</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 195       <span class="k">print</span> <span class="q">&quot;Compound number $CmpdNum contains $ModeInfo fingerprints data: $CmpdString \n&quot;</span><span class="sc">;</span>
+ 196     <span class="s">}</span>
+ 197     <span class="k">elsif</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">DetailLevel</span>} &gt;= <span class="n">1</span> <span class="s">)</span> <span class="s">{</span>
+ 198       <span class="k">print</span> <span class="q">&quot;Compound number $CmpdNum contains $ModeInfo fingerprints data...\n&quot;</span><span class="sc">;</span>
+ 199     <span class="s">}</span>
+ 200   <span class="s">}</span>
+ 201   <span class="k">else</span> <span class="s">{</span>
+ 202     <span class="k">my</span><span class="s">(</span><span class="i">$LineNum</span><span class="cm">,</span> <span class="i">$DataLine</span><span class="s">)</span><span class="sc">;</span>
+ 203 
+ 204     <span class="i">$LineNum</span> = <span class="i">$FingerprintsFileIO</span><span class="i">-&gt;GetLineNum</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 205     <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">DetailLevel</span>} &gt;= <span class="n">3</span> <span class="s">)</span> <span class="s">{</span>
+ 206       <span class="i">$DataLine</span> = <span class="i">$FingerprintsFileIO</span><span class="i">-&gt;GetDataLine</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 207       <span class="k">print</span> <span class="q">&quot;Data line number $LineNum contains $ModeInfo fingerprints data: $DataLine \n&quot;</span><span class="sc">;</span>
+ 208     <span class="s">}</span>
+ 209     <span class="k">elsif</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">DetailLevel</span>} &gt;= <span class="n">1</span> <span class="s">)</span> <span class="s">{</span>
+ 210       <span class="k">print</span> <span class="q">&quot;Data line number $LineNum contains $ModeInfo fingerprints data...\n&quot;</span><span class="sc">;</span>
+ 211     <span class="s">}</span>
+ 212   <span class="s">}</span>
+ 213 <span class="s">}</span>
+ 214 
+ 215 <span class="c"># List detailed information about fingerprints data entry...</span>
+ 216 <span class="c">#</span>
+<a name="ListFingerprintsDataEntryInfo-"></a> 217 <span class="k">sub </span><span class="m">ListFingerprintsDataEntryInfo</span> <span class="s">{</span>
+ 218   <span class="k">my</span><span class="s">(</span><span class="i">$FingerprintsFileIO</span><span class="cm">,</span> <span class="i">$FileType</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
+ 219   <span class="k">my</span><span class="s">(</span><span class="i">$FingerprintsObject</span><span class="cm">,</span> <span class="i">$FingerprintsString</span><span class="cm">,</span> <span class="i">$FingerprintsType</span><span class="cm">,</span> <span class="i">$FingerprintsDescription</span><span class="cm">,</span> <span class="i">$FingerprintsSize</span><span class="cm">,</span> <span class="i">$FingerprintsBitStringFormat</span><span class="cm">,</span> <span class="i">$FingerprintsBitOrder</span><span class="cm">,</span> <span class="i">$BitDensity</span><span class="cm">,</span> <span class="i">$NumOfOnBits</span><span class="cm">,</span> <span class="i">$FingerprintsVectorValuesType</span><span class="cm">,</span> <span class="i">$FingerprintsVectorValuesFormat</span><span class="cm">,</span> <span class="i">$NumOfNonZeroValues</span><span class="s">)</span><span class="sc">;</span>
+ 220 
+ 221   <span class="i">$FingerprintsObject</span> = <span class="i">$FingerprintsFileIO</span><span class="i">-&gt;GetFingerprints</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 222   <span class="i">$FingerprintsString</span> = <span class="i">$FingerprintsFileIO</span><span class="i">-&gt;GetFingerprintsString</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 223 
+ 224   <span class="i">$FingerprintsType</span> = <span class="i">$FingerprintsObject</span><span class="i">-&gt;GetVectorType</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 225 
+ 226   <span class="k">if</span> <span class="s">(</span><span class="i">$FingerprintsType</span> =~ <span class="q">/^FingerprintsBitVector$/i</span><span class="s">)</span> <span class="s">{</span>
+ 227     <span class="i">$BitDensity</span> = <span class="q">&#39;&#39;</span><span class="sc">;</span>
+ 228     <span class="i">$NumOfOnBits</span> = <span class="q">&#39;&#39;</span><span class="sc">;</span>
+ 229 
+ 230     <span class="s">(</span><span class="i">$FingerprintsType</span><span class="cm">,</span> <span class="i">$FingerprintsDescription</span><span class="cm">,</span> <span class="i">$FingerprintsSize</span><span class="cm">,</span> <span class="i">$FingerprintsBitStringFormat</span><span class="cm">,</span> <span class="i">$FingerprintsBitOrder</span><span class="s">)</span> = <span class="i">Fingerprints::FingerprintsStringUtil::GetFingerprintsStringValues</span><span class="s">(</span><span class="i">$FingerprintsString</span><span class="s">)</span><span class="sc">;</span>
+ 231 
+ 232     <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ListBitDensity</span>} || <span class="i">$OptionsInfo</span>{<span class="w">ListNumOfOnBits</span>}<span class="s">)</span> <span class="s">{</span>
+ 233       <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ListBitDensity</span>}<span class="s">)</span> <span class="s">{</span>
+ 234         <span class="i">$BitDensity</span> = <span class="i">$FingerprintsObject</span><span class="i">-&gt;GetFingerprintsBitDensity</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 235       <span class="s">}</span>
+ 236       <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ListNumOfOnBits</span>}<span class="s">)</span> <span class="s">{</span>
+ 237         <span class="i">$NumOfOnBits</span> = <span class="i">$FingerprintsObject</span><span class="i">-&gt;GetNumOfSetBits</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 238       <span class="s">}</span>
+ 239     <span class="s">}</span>
+ 240   <span class="s">}</span>
+ 241   <span class="k">elsif</span> <span class="s">(</span><span class="i">$FingerprintsType</span> =~ <span class="q">/^FingerprintsVector$/i</span><span class="s">)</span> <span class="s">{</span>
+ 242     <span class="i">$NumOfNonZeroValues</span> = <span class="q">&#39;&#39;</span><span class="sc">;</span>
+ 243 
+ 244     <span class="s">(</span><span class="i">$FingerprintsType</span><span class="cm">,</span> <span class="i">$FingerprintsDescription</span><span class="cm">,</span> <span class="i">$FingerprintsSize</span><span class="cm">,</span> <span class="i">$FingerprintsVectorValuesType</span><span class="cm">,</span> <span class="i">$FingerprintsVectorValuesFormat</span><span class="s">)</span> = <span class="i">Fingerprints::FingerprintsStringUtil::GetFingerprintsStringValues</span><span class="s">(</span><span class="i">$FingerprintsString</span><span class="s">)</span><span class="sc">;</span>
+ 245 
+ 246     <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ListNumOfNonZeroValues</span>}<span class="s">)</span> <span class="s">{</span>
+ 247       <span class="k">if</span> <span class="s">(</span><span class="i">$FingerprintsVectorValuesType</span> =~ <span class="q">/^AlphaNumericalValues$/i</span><span class="s">)</span> <span class="s">{</span>
+ 248         <span class="i">$NumOfNonZeroValues</span> = <span class="q">&#39;NA&#39;</span><span class="sc">;</span>
+ 249       <span class="s">}</span>
+ 250       <span class="k">else</span> <span class="s">{</span>
+ 251         <span class="i">$NumOfNonZeroValues</span> = <span class="i">$FingerprintsObject</span><span class="i">-&gt;GetNumOfNonZeroValues</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 252       <span class="s">}</span>
+ 253     <span class="s">}</span>
+ 254   <span class="s">}</span>
+ 255 
+ 256   <span class="k">if</span> <span class="s">(</span><span class="i">$FileType</span> =~ <span class="q">/^SD$/i</span><span class="s">)</span> <span class="s">{</span>
+ 257     <span class="k">print</span> <span class="q">&quot;Compound number: &quot;</span> . <span class="i">$FingerprintsFileIO</span><span class="i">-&gt;GetCompoundNum</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 258   <span class="s">}</span>
+ 259   <span class="k">else</span> <span class="s">{</span>
+ 260     <span class="k">print</span> <span class="q">&quot;Data line number: &quot;</span> . <span class="i">$FingerprintsFileIO</span><span class="i">-&gt;GetLineNum</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 261   <span class="s">}</span>
+ 262 
+ 263   <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsType</span>}<span class="s">)</span> <span class="s">{</span>
+ 264     <span class="k">print</span> <span class="q">&quot;; FPType: $FingerprintsType&quot;</span><span class="sc">;</span>
+ 265   <span class="s">}</span>
+ 266   <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsDescription</span>}<span class="s">)</span> <span class="s">{</span>
+ 267     <span class="k">print</span> <span class="q">&quot;; FPDescription: $FingerprintsDescription&quot;</span><span class="sc">;</span>
+ 268   <span class="s">}</span>
+ 269   <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsSize</span>}<span class="s">)</span> <span class="s">{</span>
+ 270     <span class="k">print</span> <span class="q">&quot;; FPSize: $FingerprintsSize&quot;</span><span class="sc">;</span>
+ 271   <span class="s">}</span>
+ 272 
+ 273   <span class="k">if</span> <span class="s">(</span><span class="i">$FingerprintsType</span> =~ <span class="q">/^FingerprintsBitVector$/i</span><span class="s">)</span> <span class="s">{</span>
+ 274     <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsBitStringFormat</span>}<span class="s">)</span> <span class="s">{</span>
+ 275       <span class="k">print</span> <span class="q">&quot;; FPBitStringFormat: $FingerprintsBitStringFormat&quot;</span><span class="sc">;</span>
+ 276     <span class="s">}</span>
+ 277     <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsBitOrder</span>}<span class="s">)</span> <span class="s">{</span>
+ 278       <span class="k">print</span> <span class="q">&quot;; FPBitOrder: $FingerprintsBitOrder&quot;</span><span class="sc">;</span>
+ 279     <span class="s">}</span>
+ 280     <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ListBitDensity</span>}<span class="s">)</span> <span class="s">{</span>
+ 281       <span class="k">print</span> <span class="q">&quot;; BitDensity: $BitDensity&quot;</span><span class="sc">;</span>
+ 282     <span class="s">}</span>
+ 283     <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ListNumOfOnBits</span>}<span class="s">)</span> <span class="s">{</span>
+ 284       <span class="k">print</span> <span class="q">&quot;; NumOfOnBits: $NumOfOnBits&quot;</span><span class="sc">;</span>
+ 285     <span class="s">}</span>
+ 286   <span class="s">}</span>
+ 287   <span class="k">elsif</span> <span class="s">(</span><span class="i">$FingerprintsType</span> =~ <span class="q">/^FingerprintsVector$/i</span><span class="s">)</span> <span class="s">{</span>
+ 288     <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsVectorValuesType</span>}<span class="s">)</span> <span class="s">{</span>
+ 289       <span class="k">print</span> <span class="q">&quot;; FPVectorValuesType: $FingerprintsVectorValuesType&quot;</span><span class="sc">;</span>
+ 290     <span class="s">}</span>
+ 291     <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsVectorValuesFormat</span>}<span class="s">)</span> <span class="s">{</span>
+ 292       <span class="k">print</span> <span class="q">&quot;; FPVectorValuesFormat: $FingerprintsVectorValuesFormat&quot;</span><span class="sc">;</span>
+ 293     <span class="s">}</span>
+ 294     <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ListNumOfNonZeroValues</span>}<span class="s">)</span> <span class="s">{</span>
+ 295       <span class="k">print</span> <span class="q">&quot;; NumOfNonZeroValues: $NumOfNonZeroValues&quot;</span><span class="sc">;</span>
+ 296     <span class="s">}</span>
+ 297   <span class="s">}</span>
+ 298   <span class="k">print</span> <span class="q">&quot;\n&quot;</span><span class="sc">;</span>
+ 299 <span class="s">}</span>
+ 300 
+ 301 <span class="c"># List file type header information...</span>
+ 302 <span class="c">#</span>
+<a name="ListFileTypeHeaderInfo-"></a> 303 <span class="k">sub </span><span class="m">ListFileTypeHeaderInfo</span> <span class="s">{</span>
+ 304   <span class="k">my</span><span class="s">(</span><span class="i">$FingerprintsFileIO</span><span class="cm">,</span> <span class="i">$FileType</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
+ 305   <span class="k">my</span><span class="s">(</span><span class="i">$Key</span><span class="cm">,</span> <span class="i">$Value</span><span class="cm">,</span> <span class="i">@DataColLabels</span><span class="cm">,</span> <span class="i">%HeaderDataKeysAndValues</span><span class="s">)</span><span class="sc">;</span>
+ 306 
+ 307   <span class="k">if</span> <span class="s">(</span><span class="i">$FileType</span> =~ <span class="q">/^Text$/i</span><span class="s">)</span> <span class="s">{</span>
+ 308     <span class="i">@DataColLabels</span> = <span class="i">$FingerprintsFileIO</span><span class="i">-&gt;GetDataColLabels</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 309     <span class="k">print</span> <span class="q">&quot;Number of columns: &quot;</span> . <span class="k">scalar</span> <span class="i">@DataColLabels</span> . <span class="q">&quot;\n&quot;</span><span class="sc">;</span>
+ 310     <span class="k">print</span> <span class="q">&quot;Column labels: &quot;</span><span class="cm">,</span> <span class="i">JoinWords</span><span class="s">(</span>\<span class="i">@DataColLabels</span><span class="cm">,</span> <span class="q">&quot;, &quot;</span><span class="cm">,</span> <span class="n">1</span><span class="s">)</span><span class="cm">,</span> <span class="q">&quot;\n&quot;</span><span class="sc">;</span>
+ 311   <span class="s">}</span>
+ 312   <span class="k">elsif</span> <span class="s">(</span><span class="i">$FileType</span> =~ <span class="q">/^FP$/i</span><span class="s">)</span> <span class="s">{</span>
+ 313     <span class="i">%HeaderDataKeysAndValues</span> = <span class="i">$FingerprintsFileIO</span><span class="i">-&gt;GetHeaderDataKeysAndValues</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 314 
+ 315     <span class="k">print</span> <span class="q">&quot;\nFP file header data keys and values: \n#\n&quot;</span><span class="sc">;</span>
+ 316     <span class="k">for</span> <span class="i">$Key</span> <span class="s">(</span><span class="i">$FingerprintsFileIO</span><span class="i">-&gt;GetHeaderDataKeys</span><span class="s">(</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
+ 317       <span class="i">$Value</span> = <span class="i">$HeaderDataKeysAndValues</span>{<span class="i">$Key</span>}<span class="sc">;</span>
+ 318       <span class="k">print</span> <span class="q">&quot;# $Key = $Value\n&quot;</span><span class="sc">;</span>
+ 319     <span class="s">}</span>
+ 320     <span class="k">print</span> <span class="q">&quot;#\n&quot;</span><span class="sc">;</span>
+ 321   <span class="s">}</span>
+ 322 <span class="s">}</span>
+ 323 
+ 324 <span class="c"># Total size of all the fiels...</span>
+<a name="ListTotalSizeOfFiles-"></a> 325 <span class="k">sub </span><span class="m">ListTotalSizeOfFiles</span> <span class="s">{</span>
+ 326   <span class="k">my</span><span class="s">(</span><span class="i">$FileOkayCount</span><span class="cm">,</span> <span class="i">$TotalSize</span><span class="cm">,</span> <span class="i">$Index</span><span class="s">)</span><span class="sc">;</span>
+ 327 
+ 328   <span class="i">$FileOkayCount</span> = <span class="n">0</span><span class="sc">;</span>
+ 329   <span class="i">$TotalSize</span> = <span class="n">0</span><span class="sc">;</span>
+ 330 
+ 331   <span class="k">for</span> <span class="i">$Index</span> <span class="s">(</span><span class="n">0</span> .. <span class="i">$#FingerprintsFilesList</span><span class="s">)</span> <span class="s">{</span>
+ 332     <span class="k">if</span> <span class="s">(</span><span class="i">$FingerprintsFilesList</span>[<span class="i">$Index</span>]<span class="s">)</span> <span class="s">{</span>
+ 333       <span class="i">$FileOkayCount</span>++<span class="sc">;</span>
+ 334       <span class="i">$TotalSize</span> += <span class="i">$FingerprintsFilesInfo</span>{<span class="w">FileSize</span>}[<span class="i">$Index</span>]<span class="sc">;</span>
+ 335     <span class="s">}</span>
+ 336   <span class="s">}</span>
+ 337   <span class="k">if</span> <span class="s">(</span><span class="i">$FileOkayCount</span> &gt; <span class="n">1</span><span class="s">)</span> <span class="s">{</span>
+ 338     <span class="k">print</span> <span class="q">&quot;\nTotal size of $FileOkayCount files: &quot;</span><span class="cm">,</span> <span class="i">FormatFileSize</span><span class="s">(</span><span class="i">$TotalSize</span><span class="s">)</span><span class="cm">,</span> <span class="q">&quot;\n&quot;</span><span class="sc">;</span>
+ 339   <span class="s">}</span>
+ 340 <span class="s">}</span>
+ 341 
+ 342 <span class="c"># Retrieve information about fingerprints files...</span>
+ 343 <span class="c">#</span>
+<a name="RetrieveFingerprintsFilesInfo-"></a> 344 <span class="k">sub </span><span class="m">RetrieveFingerprintsFilesInfo</span> <span class="s">{</span>
+ 345   <span class="k">my</span><span class="s">(</span><span class="i">$FingerprintsFile</span><span class="cm">,</span> <span class="i">$Index</span><span class="cm">,</span> <span class="i">$FileDir</span><span class="cm">,</span> <span class="i">$FileExt</span><span class="cm">,</span> <span class="i">$FileName</span><span class="cm">,</span> <span class="i">$FileType</span><span class="cm">,</span> <span class="i">$InDelim</span><span class="cm">,</span> <span class="i">$ModifiedTimeString</span><span class="cm">,</span> <span class="i">$ModifiedDateString</span><span class="cm">,</span> <span class="i">%FingerprintsFileIOParameters</span><span class="s">)</span><span class="sc">;</span>
+ 346 
+ 347   <span class="i">%FingerprintsFilesInfo</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 348   <span class="i">@</span>{<span class="i">$FingerprintsFilesInfo</span>{<span class="w">FileOkay</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 349   <span class="i">@</span>{<span class="i">$FingerprintsFilesInfo</span>{<span class="w">FileType</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 350   <span class="i">@</span>{<span class="i">$FingerprintsFilesInfo</span>{<span class="w">FileSize</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 351   <span class="i">@</span>{<span class="i">$FingerprintsFilesInfo</span>{<span class="w">FileLastModified</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 352   <span class="i">@</span>{<span class="i">$FingerprintsFilesInfo</span>{<span class="w">InDelim</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 353 
+ 354   <span class="i">@</span>{<span class="i">$FingerprintsFilesInfo</span>{<span class="w">FingerprintsFileIOParameters</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 355 
+ 356   <span class="j">FILELIST:</span> <span class="k">for</span> <span class="i">$Index</span> <span class="s">(</span><span class="n">0</span> .. <span class="i">$#FingerprintsFilesList</span><span class="s">)</span> <span class="s">{</span>
+ 357     <span class="i">$FingerprintsFile</span> = <span class="i">$FingerprintsFilesList</span>[<span class="i">$Index</span>]<span class="sc">;</span>
+ 358 
+ 359     <span class="i">$FingerprintsFilesInfo</span>{<span class="w">FileOkay</span>}[<span class="i">$Index</span>] = <span class="n">0</span><span class="sc">;</span>
+ 360     <span class="i">$FingerprintsFilesInfo</span>{<span class="w">FileType</span>}[<span class="i">$Index</span>] = <span class="q">&#39;&#39;</span><span class="sc">;</span>
+ 361     <span class="i">$FingerprintsFilesInfo</span>{<span class="w">FileSize</span>}[<span class="i">$Index</span>] = <span class="n">0</span><span class="sc">;</span>
+ 362     <span class="i">$FingerprintsFilesInfo</span>{<span class="w">FileLastModified</span>}[<span class="i">$Index</span>] = <span class="q">&#39;&#39;</span><span class="sc">;</span>
+ 363     <span class="i">$FingerprintsFilesInfo</span>{<span class="w">InDelim</span>}[<span class="i">$Index</span>] = <span class="q">&quot;&quot;</span><span class="sc">;</span>
+ 364 
+ 365     <span class="i">%</span>{<span class="i">$FingerprintsFilesInfo</span>{<span class="w">FingerprintsFileIOParameters</span>}[<span class="i">$Index</span>]} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 366 
+ 367     <span class="i">$FingerprintsFile</span> = <span class="i">$FingerprintsFilesList</span>[<span class="i">$Index</span>]<span class="sc">;</span>
+ 368     <span class="k">if</span> <span class="s">(</span>!<span class="s">(</span><span class="k">-e</span> <span class="i">$FingerprintsFile</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
+ 369       <span class="k">warn</span> <span class="q">&quot;Warning: Ignoring file $FingerprintsFile: It doesn&#39;t exist\n&quot;</span><span class="sc">;</span>
+ 370       <span class="k">next</span> <span class="j">FILELIST</span><span class="sc">;</span>
+ 371     <span class="s">}</span>
+ 372 
+ 373     <span class="i">$FileType</span> = <span class="i">Fingerprints::FingerprintsFileUtil::GetFingerprintsFileType</span><span class="s">(</span><span class="i">$FingerprintsFile</span><span class="s">)</span><span class="sc">;</span>
+ 374     <span class="k">if</span> <span class="s">(</span><span class="i">IsEmpty</span><span class="s">(</span><span class="i">$FileType</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
+ 375       <span class="k">warn</span> <span class="q">&quot;Warning: Ignoring file $FingerprintsFile: It&#39;s not a fingerprints file\n&quot;</span><span class="sc">;</span>
+ 376       <span class="k">next</span> <span class="j">FILELIST</span><span class="sc">;</span>
+ 377     <span class="s">}</span>
+ 378 
+ 379     <span class="i">$FileDir</span> = <span class="q">&quot;&quot;</span><span class="sc">;</span> <span class="i">$FileName</span> = <span class="q">&quot;&quot;</span><span class="sc">;</span> <span class="i">$FileExt</span> = <span class="q">&quot;&quot;</span><span class="sc">;</span>
+ 380     <span class="s">(</span><span class="i">$FileDir</span><span class="cm">,</span> <span class="i">$FileName</span><span class="cm">,</span> <span class="i">$FileExt</span><span class="s">)</span> = <span class="i">ParseFileName</span><span class="s">(</span><span class="i">$FingerprintsFile</span><span class="s">)</span><span class="sc">;</span>
+ 381 
+ 382     <span class="i">$InDelim</span> = <span class="s">(</span><span class="i">$FileExt</span> =~ <span class="q">/^tsv$/i</span><span class="s">)</span> ? <span class="q">&#39;Tab&#39;</span> <span class="co">:</span> <span class="i">$OptionsInfo</span>{<span class="w">InDelim</span>}<span class="sc">;</span>
+ 383 
+ 384     <span class="c"># Setup FingerprintsFileIO parameters...</span>
+ 385     <span class="i">%FingerprintsFileIOParameters</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 386     <span class="j">FILEIOPARAMETERS:</span> <span class="s">{</span>
+ 387       <span class="k">if</span> <span class="s">(</span><span class="i">$FileType</span> =~ <span class="q">/^SD$/i</span><span class="s">)</span> <span class="s">{</span>
+ 388         <span class="i">%FingerprintsFileIOParameters</span> = <span class="s">(</span><span class="q">&#39;Name&#39;</span> <span class="cm">=&gt;</span> <span class="i">$FingerprintsFile</span><span class="cm">,</span> <span class="q">&#39;Mode&#39;</span> <span class="cm">=&gt;</span> <span class="q">&#39;Read&#39;</span><span class="cm">,</span> <span class="q">&#39;ValidateData&#39;</span> <span class="cm">=&gt;</span> <span class="i">$OptionsInfo</span>{<span class="w">ValidateData</span>}<span class="cm">,</span> <span class="q">&#39;DetailLevel&#39;</span> <span class="cm">=&gt;</span> <span class="n">1</span><span class="cm">,</span> <span class="q">&#39;FingerprintsFieldLabel&#39;</span> <span class="cm">=&gt;</span> <span class="i">$OptionsInfo</span>{<span class="w">FingerprintsFieldLabel</span>}<span class="s">)</span><span class="sc">;</span>
+ 389         <span class="k">last</span> <span class="j">FILEIOPARAMETERS</span><span class="sc">;</span>
+ 390       <span class="s">}</span>
+ 391       <span class="k">if</span> <span class="s">(</span><span class="i">$FileType</span> =~ <span class="q">/^FP$/i</span><span class="s">)</span> <span class="s">{</span>
+ 392         <span class="i">%FingerprintsFileIOParameters</span> = <span class="s">(</span><span class="q">&#39;Name&#39;</span> <span class="cm">=&gt;</span> <span class="i">$FingerprintsFile</span><span class="cm">,</span> <span class="q">&#39;Mode&#39;</span> <span class="cm">=&gt;</span> <span class="q">&#39;Read&#39;</span><span class="cm">,</span> <span class="q">&#39;ValidateData&#39;</span> <span class="cm">=&gt;</span> <span class="i">$OptionsInfo</span>{<span class="w">ValidateData</span>}<span class="cm">,</span> <span class="q">&#39;DetailLevel&#39;</span> <span class="cm">=&gt;</span> <span class="n">1</span><span class="s">)</span><span class="sc">;</span>
+ 393         <span class="k">last</span> <span class="j">FILEIOPARAMETERS</span><span class="sc">;</span>
+ 394       <span class="s">}</span>
+ 395       <span class="k">if</span> <span class="s">(</span><span class="i">$FileType</span> =~ <span class="q">/^Text$/i</span><span class="s">)</span> <span class="s">{</span>
+ 396         <span class="i">%FingerprintsFileIOParameters</span> = <span class="s">(</span><span class="q">&#39;Name&#39;</span> <span class="cm">=&gt;</span> <span class="i">$FingerprintsFile</span><span class="cm">,</span> <span class="q">&#39;Mode&#39;</span> <span class="cm">=&gt;</span> <span class="q">&#39;Read&#39;</span><span class="cm">,</span> <span class="q">&#39;ValidateData&#39;</span> <span class="cm">=&gt;</span> <span class="i">$OptionsInfo</span>{<span class="w">ValidateData</span>}<span class="cm">,</span> <span class="q">&#39;DetailLevel&#39;</span> <span class="cm">=&gt;</span> <span class="n">1</span><span class="cm">,</span> <span class="q">&#39;FingerprintsCol&#39;</span> <span class="cm">=&gt;</span> <span class="i">$OptionsInfo</span>{<span class="w">FingerprintsCol</span>}<span class="cm">,</span> <span class="q">&#39;ColMode&#39;</span> <span class="cm">=&gt;</span> <span class="i">$OptionsInfo</span>{<span class="w">ColMode</span>}<span class="cm">,</span> <span class="q">&#39;InDelim&#39;</span> <span class="cm">=&gt;</span> <span class="i">$OptionsInfo</span>{<span class="w">InDelim</span>}<span class="s">)</span><span class="sc">;</span>
+ 397         <span class="k">last</span> <span class="j">FILEIOPARAMETERS</span><span class="sc">;</span>
+ 398       <span class="s">}</span>
+ 399       <span class="k">warn</span> <span class="q">&quot;Warning: File type for fingerprints file, $FingerprintsFile, is not valid. Supported file types: SD, FP or Text\n&quot;</span><span class="sc">;</span>
+ 400       <span class="k">next</span> <span class="j">FILELIST</span><span class="sc">;</span>
+ 401     <span class="s">}</span>
+ 402 
+ 403     <span class="i">$FingerprintsFilesInfo</span>{<span class="w">FileOkay</span>}[<span class="i">$Index</span>] = <span class="n">1</span><span class="sc">;</span>
+ 404     <span class="i">$FingerprintsFilesInfo</span>{<span class="w">FileType</span>}[<span class="i">$Index</span>] = <span class="i">$FileType</span><span class="sc">;</span>
+ 405 
+ 406     <span class="i">$FingerprintsFilesInfo</span>{<span class="w">FileSize</span>}[<span class="i">$Index</span>] = <span class="i">FileSize</span><span class="s">(</span><span class="i">$FingerprintsFile</span><span class="s">)</span><span class="sc">;</span>
+ 407     <span class="s">(</span><span class="i">$ModifiedTimeString</span><span class="cm">,</span> <span class="i">$ModifiedDateString</span><span class="s">)</span> = <span class="i">FormattedFileModificationTimeAndDate</span><span class="s">(</span><span class="i">$FingerprintsFile</span><span class="s">)</span><span class="sc">;</span>
+ 408     <span class="i">$FingerprintsFilesInfo</span>{<span class="w">FileLastModified</span>}[<span class="i">$Index</span>] = <span class="q">&quot;$ModifiedTimeString; $ModifiedDateString&quot;</span><span class="sc">;</span>
+ 409 
+ 410     <span class="i">$FingerprintsFilesInfo</span>{<span class="w">InDelim</span>}[<span class="i">$Index</span>] = <span class="i">$InDelim</span><span class="sc">;</span>
+ 411 
+ 412     <span class="i">%</span>{<span class="i">$FingerprintsFilesInfo</span>{<span class="w">FingerprintsFileIOParameters</span>}[<span class="i">$Index</span>]} = <span class="i">%FingerprintsFileIOParameters</span><span class="sc">;</span>
+ 413   <span class="s">}</span>
+ 414 <span class="s">}</span>
+ 415 
+ 416 <span class="c"># Process option values...</span>
+<a name="ProcessOptions-"></a> 417 <span class="k">sub </span><span class="m">ProcessOptions</span> <span class="s">{</span>
+ 418   <span class="i">%OptionsInfo</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 419 
+ 420   <span class="i">$OptionsInfo</span>{<span class="w">ListAverageBitDensity</span>} = <span class="s">(</span><span class="i">$Options</span>{<span class="w">all</span>} || <span class="i">$Options</span>{<span class="w">averagebitdensity</span>}<span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span><span class="n">0</span><span class="sc">;</span>
+ 421   <span class="i">$OptionsInfo</span>{<span class="w">ListBitDensity</span>} = <span class="s">(</span><span class="i">$Options</span>{<span class="w">all</span>} || <span class="i">$Options</span>{<span class="w">bitdensity</span>}<span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span><span class="n">0</span><span class="sc">;</span>
+ 422 
+ 423   <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ListAverageBitDensity</span>}<span class="s">)</span> <span class="s">{</span>
+ 424     <span class="c"># List bit density as well...</span>
+ 425     <span class="i">$OptionsInfo</span>{<span class="w">ListBitDensity</span>} = <span class="n">1</span><span class="sc">;</span>
+ 426   <span class="s">}</span>
+ 427 
+ 428   <span class="c"># By default, count number of rows containing fingerprints data...</span>
+ 429   <span class="i">$OptionsInfo</span>{<span class="w">CountFingerprints</span>} = <span class="n">1</span><span class="sc">;</span>
+ 430   <span class="i">$OptionsInfo</span>{<span class="w">CountEmptyFingerprints</span>} = <span class="s">(</span><span class="i">$Options</span>{<span class="w">all</span>} || <span class="i">$Options</span>{<span class="w">empty</span>}<span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span><span class="n">0</span><span class="sc">;</span>
+ 431 
+ 432   <span class="i">$OptionsInfo</span>{<span class="w">ColMode</span>} = <span class="i">$Options</span>{<span class="w">colmode</span>}<span class="sc">;</span>
+ 433   <span class="k">if</span> <span class="s">(</span><span class="i">IsNotEmpty</span><span class="s">(</span><span class="i">$Options</span>{<span class="w">fingerprintscol</span>}<span class="s">)</span><span class="s">)</span> <span class="s">{</span>
+ 434     <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">colmode</span>} =~ <span class="q">/^ColNum$/i</span><span class="s">)</span> <span class="s">{</span>
+ 435       <span class="k">if</span> <span class="s">(</span>!<span class="i">IsPositiveInteger</span><span class="s">(</span><span class="i">$Options</span>{<span class="w">fingerprintscol</span>}<span class="s">)</span><span class="s">)</span> <span class="s">{</span>
+ 436         <span class="k">die</span> <span class="q">&quot;Error: Column value, $Options{fingerprintscol}, specified using \&quot;--FingerprintsCol\&quot; is not valid: Allowed integer values: &gt; 0.\n&quot;</span><span class="sc">;</span>
+ 437       <span class="s">}</span>
+ 438     <span class="s">}</span>
+ 439     <span class="i">$OptionsInfo</span>{<span class="w">FingerprintsCol</span>} = <span class="i">$Options</span>{<span class="w">fingerprintscol</span>}<span class="sc">;</span>
+ 440   <span class="s">}</span>
+ 441   <span class="k">else</span> <span class="s">{</span>
+ 442     <span class="i">$OptionsInfo</span>{<span class="w">FingerprintsCol</span>} = <span class="q">&#39;AutoDetect&#39;</span><span class="sc">;</span>
+ 443   <span class="s">}</span>
+ 444 
+ 445   <span class="k">if</span> <span class="s">(</span><span class="i">IsNotEmpty</span><span class="s">(</span><span class="i">$Options</span>{<span class="w">fingerprintsfield</span>}<span class="s">)</span><span class="s">)</span> <span class="s">{</span>
+ 446     <span class="i">$OptionsInfo</span>{<span class="w">FingerprintsFieldLabel</span>} = <span class="i">$Options</span>{<span class="w">fingerprintsfield</span>}<span class="sc">;</span>
+ 447   <span class="s">}</span>
+ 448   <span class="k">else</span> <span class="s">{</span>
+ 449     <span class="i">$OptionsInfo</span>{<span class="w">FingerprintsFieldLabel</span>} = <span class="q">&#39;AutoDetect&#39;</span><span class="sc">;</span>
+ 450   <span class="s">}</span>
+ 451 
+ 452   <span class="i">$OptionsInfo</span>{<span class="w">ValidateData</span>} = <span class="s">(</span><span class="i">$Options</span>{<span class="w">all</span>} || <span class="i">$Options</span>{<span class="w">datacheck</span>}<span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span><span class="n">0</span><span class="sc">;</span>
+ 453   <span class="i">$OptionsInfo</span>{<span class="w">DetailLevel</span>} = <span class="i">$Options</span>{<span class="w">detail</span>}<span class="sc">;</span>
+ 454 
+ 455   <span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsType</span>} = <span class="s">(</span><span class="i">$Options</span>{<span class="w">all</span>} || <span class="i">$Options</span>{<span class="w">fingerprintstype</span>}<span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span><span class="n">0</span><span class="sc">;</span>
+ 456   <span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsDescription</span>} = <span class="s">(</span><span class="i">$Options</span>{<span class="w">all</span>} || <span class="i">$Options</span>{<span class="w">fingerprintsdescription</span>}<span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span><span class="n">0</span><span class="sc">;</span>
+ 457   <span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsSize</span>} = <span class="s">(</span><span class="i">$Options</span>{<span class="w">all</span>} || <span class="i">$Options</span>{<span class="w">fingerprintssize</span>}<span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span><span class="n">0</span><span class="sc">;</span>
+ 458 
+ 459   <span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsBitStringFormat</span>} = <span class="s">(</span><span class="i">$Options</span>{<span class="w">all</span>} || <span class="i">$Options</span>{<span class="w">fingerprintsbitstringformat</span>}<span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span><span class="n">0</span><span class="sc">;</span>
+ 460   <span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsBitOrder</span>} = <span class="s">(</span><span class="i">$Options</span>{<span class="w">all</span>} || <span class="i">$Options</span>{<span class="w">fingerprintsbitorder</span>}<span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span><span class="n">0</span><span class="sc">;</span>
+ 461 
+ 462   <span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsVectorValuesType</span>} = <span class="s">(</span><span class="i">$Options</span>{<span class="w">all</span>} || <span class="i">$Options</span>{<span class="w">fingerprintsvectorvaluestype</span>}<span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span><span class="n">0</span><span class="sc">;</span>
+ 463   <span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsVectorValuesFormat</span>} = <span class="s">(</span><span class="i">$Options</span>{<span class="w">all</span>} || <span class="i">$Options</span>{<span class="w">fingerprintsvectorvaluesformat</span>}<span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span><span class="n">0</span><span class="sc">;</span>
+ 464 
+ 465   <span class="i">$OptionsInfo</span>{<span class="w">InDelim</span>} = <span class="i">$Options</span>{<span class="w">indelim</span>}<span class="sc">;</span>
+ 466 
+ 467   <span class="i">$OptionsInfo</span>{<span class="w">ListNumOfOnBits</span>} = <span class="s">(</span><span class="i">$Options</span>{<span class="w">all</span>} || <span class="i">$Options</span>{<span class="w">numofonbits</span>}<span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span><span class="n">0</span><span class="sc">;</span>
+ 468   <span class="i">$OptionsInfo</span>{<span class="w">ListNumOfNonZeroValues</span>} = <span class="s">(</span><span class="i">$Options</span>{<span class="w">all</span>} || <span class="i">$Options</span>{<span class="w">numofnonzerovalues</span>}<span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span><span class="n">0</span><span class="sc">;</span>
+ 469 
+ 470   <span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsDataEntryInfo</span>} = <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsType</span>} || <span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsDescription</span>} || <span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsSize</span>} || <span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsBitStringFormat</span>} || <span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsBitOrder</span>} || <span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsVectorValuesType</span>} || <span class="i">$OptionsInfo</span>{<span class="w">ListFingerprintsVectorValuesFormat</span>} || <span class="i">$OptionsInfo</span>{<span class="w">ListBitDensity</span>} || <span class="i">$OptionsInfo</span>{<span class="w">ListAverageBitDensity</span>} || <span class="i">$OptionsInfo</span>{<span class="w">ListNumOfOnBits</span>} ||  <span class="i">$OptionsInfo</span>{<span class="w">ListNumOfNonZeroValues</span>}<span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span> <span class="n">0</span><span class="sc">;</span>
+ 471 
+ 472 <span class="s">}</span>
+ 473 
+ 474 <span class="c"># Setup script usage  and retrieve command line arguments specified using various options...</span>
+<a name="SetupScriptUsage-"></a> 475 <span class="k">sub </span><span class="m">SetupScriptUsage</span> <span class="s">{</span>
+ 476 
+ 477   <span class="c"># Retrieve all the options...</span>
+ 478   <span class="i">%Options</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
+ 479 
+ 480   <span class="i">$Options</span>{<span class="w">colmode</span>} = <span class="q">&#39;colnum&#39;</span><span class="sc">;</span>
+ 481   <span class="i">$Options</span>{<span class="w">detail</span>} = <span class="n">1</span><span class="sc">;</span>
+ 482   <span class="i">$Options</span>{<span class="w">indelim</span>} = <span class="q">&#39;comma&#39;</span><span class="sc">;</span>
+ 483 
+ 484   <span class="k">if</span> <span class="s">(</span>!<span class="i">GetOptions</span><span class="s">(</span>\<span class="i">%Options</span><span class="cm">,</span> <span class="q">&quot;all|a&quot;</span><span class="cm">,</span> <span class="q">&quot;averagebitdensity&quot;</span><span class="cm">,</span> <span class="q">&quot;bitdensity&quot;</span><span class="cm">,</span> <span class="q">&quot;count&quot;</span><span class="cm">,</span> <span class="q">&quot;colmode|c=s&quot;</span><span class="cm">,</span> <span class="q">&quot;detail|d=i&quot;</span><span class="cm">,</span> <span class="q">&quot;datacheck&quot;</span><span class="cm">,</span> <span class="q">&quot;empty|e&quot;</span><span class="cm">,</span> <span class="q">&quot;fingerprintsfield=s&quot;</span><span class="cm">,</span> <span class="q">&quot;fingerprintscol=s&quot;</span><span class="cm">,</span> <span class="q">&quot;fingerprintstype&quot;</span><span class="cm">,</span> <span class="q">&quot;fingerprintsdescription&quot;</span><span class="cm">,</span> <span class="q">&quot;fingerprintssize&quot;</span><span class="cm">,</span> <span class="q">&quot;fingerprintsbitstringformat&quot;</span><span class="cm">,</span> <span class="q">&quot;fingerprintsbitorder&quot;</span><span class="cm">,</span> <span class="q">&quot;fingerprintsvectorvaluestype&quot;</span><span class="cm">,</span> <span class="q">&quot;fingerprintsvectorvaluesformat&quot;</span><span class="cm">,</span> <span class="q">&quot;help|h&quot;</span><span class="cm">,</span> <span class="q">&quot;indelim=s&quot;</span><span class="cm">,</span> <span class="q">&quot;numofonbits&quot;</span><span class="cm">,</span> <span class="q">&quot;numofnonzerovalues&quot;</span><span class="cm">,</span> <span class="q">&quot;workingdir|w=s&quot;</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
+ 485     <span class="k">die</span> <span class="q">&quot;\nTo get a list of valid options and their values, use \&quot;$ScriptName -h\&quot; or\n\&quot;perl -S $ScriptName -h\&quot; command and try again...\n&quot;</span><span class="sc">;</span>
+ 486   <span class="s">}</span>
+ 487   <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">workingdir</span>}<span class="s">)</span> <span class="s">{</span>
+ 488     <span class="k">if</span> <span class="s">(</span>! <span class="k">-d</span> <span class="i">$Options</span>{<span class="w">workingdir</span>}<span class="s">)</span> <span class="s">{</span>
+ 489       <span class="k">die</span> <span class="q">&quot;Error: The value specified, $Options{workingdir}, for option \&quot;-w --workingdir\&quot; is not a directory name.\n&quot;</span><span class="sc">;</span>
+ 490     <span class="s">}</span>
+ 491     <span class="k">chdir</span> <span class="i">$Options</span>{<span class="w">workingdir</span>} <span class="k">or</span> <span class="k">die</span> <span class="q">&quot;Error: Couldn&#39;t chdir $Options{workingdir}: $! \n&quot;</span><span class="sc">;</span>
+ 492   <span class="s">}</span>
+ 493   <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">colmode</span>} !~ <span class="q">/^(ColNum|ColLabel)$/i</span><span class="s">)</span> <span class="s">{</span>
+ 494     <span class="k">die</span> <span class="q">&quot;Error: The value specified, $Options{colmode}, for option \&quot;-c, --ColMode\&quot; is not valid. Allowed values: ColNum, or ColLabel\n&quot;</span><span class="sc">;</span>
+ 495   <span class="s">}</span>
+ 496   <span class="k">if</span> <span class="s">(</span>!<span class="i">IsPositiveInteger</span><span class="s">(</span><span class="i">$Options</span>{<span class="w">detail</span>}<span class="s">)</span><span class="s">)</span> <span class="s">{</span>
+ 497     <span class="k">die</span> <span class="q">&quot;Error: The value specified, $Options{detail}, for option \&quot;-d, --detail\&quot; is not valid. Allowed values: &gt; 0 \n&quot;</span><span class="sc">;</span>
+ 498   <span class="s">}</span>
+ 499   <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">indelim</span>} !~ <span class="q">/^(comma|semicolon)$/i</span><span class="s">)</span> <span class="s">{</span>
+ 500     <span class="k">die</span> <span class="q">&quot;Error: The value specified, $Options{indelim}, for option \&quot;--InDelim\&quot; is not valid. Allowed values: comma, or semicolon\n&quot;</span><span class="sc">;</span>
+ 501   <span class="s">}</span>
+ 502 <span class="s">}</span>
+ 503 
+<a name="EOF-"></a></pre>
+<p>&nbsp;</p>
+<br />
+<center>
+<img src="../../../images/h2o2.png">
+</center>
+</body>
+</html>