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3 <title>MayaChemTools:Documentation:JoinTextFiles.pl</title>
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7 <body leftmargin="20" rightmargin="20" topmargin="10" bottommargin="10">
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8 <br/>
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9 <center>
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10 <a href="http://www.mayachemtools.org" title="MayaChemTools Home"><img src="../../images/MayaChemToolsLogo.gif" border="0" alt="MayaChemTools"></a>
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11 </center>
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12 <br/>
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13 <div class="DocNav">
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14 <table width="100%" border=0 cellpadding=0 cellspacing=2>
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15 <tr align="left" valign="top"><td width="33%" align="left"><a href="./JoinSDFiles.html" title="JoinSDFiles.html">Previous</a> <a href="./index.html" title="Table of Contents">TOC</a> <a href="./MACCSKeysFingerprints.html" title="MACCSKeysFingerprints.html">Next</a></td><td width="34%" align="middle"><strong>JoinTextFiles.pl</strong></td><td width="33%" align="right"><a href="././code/JoinTextFiles.html" title="View source code">Code</a> | <a href="./../pdf/JoinTextFiles.pdf" title="PDF US Letter Size">PDF</a> | <a href="./../pdfgreen/JoinTextFiles.pdf" title="PDF US Letter Size with narrow margins: www.changethemargins.com">PDFGreen</a> | <a href="./../pdfa4/JoinTextFiles.pdf" title="PDF A4 Size">PDFA4</a> | <a href="./../pdfa4green/JoinTextFiles.pdf" title="PDF A4 Size with narrow margins: www.changethemargins.com">PDFA4Green</a></td></tr>
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16 </table>
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17 </div>
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18 <p>
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19 </p>
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20 <h2>NAME</h2>
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21 <p>JoinTextFiles.pl - Join multiple CSV or TSV text files into a single text file</p>
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22 <p>
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23 </p>
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24 <h2>SYNOPSIS</h2>
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25 <p>JoinTextFiles.pl TextFiles...</p>
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26 <p>JoinTextFiles.pl [<strong>-f, --fast</strong>] [<strong>-h, --help</strong>] [<strong>--indelim</strong> comma | semicolon]
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27 [<strong>-l, --label</strong> yes | no] [<strong>-o, --overwrite</strong>] [<strong>--outdelim</strong> comma | tab | semicolon]
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28 [<strong>-q, --quote</strong> yes | no] [<strong>-r, --root</strong> rootname] [<strong>-w, --workingdir</strong> dirname] TextFiles...</p>
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29 <p>
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30 </p>
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31 <h2>DESCRIPTION</h2>
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32 <p>Multiple CSV or TSV <em>TextFiles</em> are joined to generate a single text file. The
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33 file names are separated by spaces. The valid file extensions are <em>.csv</em> and <em>.tsv</em>
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34 for comma/semicolon and tab delimited text files respectively. All other file names
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35 are ignored. All the text files in a current directory can be specified by <em>*.csv</em>,
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36 <em>*.tsv</em>, or the current directory name. The <strong>--indelim</strong> option determines the
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37 format of <em>TextFiles</em>. Any file which doesn't correspond to the format indicated
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38 by <strong>--indelim</strong> option is ignored.</p>
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39 <p>
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40 </p>
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41 <h2>OPTIONS</h2>
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42 <dl>
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43 <dt><strong><strong>-f, --fast</strong></strong></dt>
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44 <dd>
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45 <p>In this mode, <strong>--indelim</strong> and <strong>-q --quote</strong> options are ignored. The format of
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46 input and output file(s) are assumed to be similar. And the text lines from <em>TextFiles</em>
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47 are simply transferred to output file without any processing.</p>
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48 </dd>
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49 <dt><strong><strong>-h, --help</strong></strong></dt>
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50 <dd>
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51 <p>Print this help message.</p>
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52 </dd>
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53 <dt><strong><strong>--indelim</strong> <em>comma | semicolon</em></strong></dt>
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54 <dd>
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55 <p>Input delimiter for CSV <em>TextFile(s)</em>. Possible values: <em>comma or semicolon</em>.
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56 Default value: <em>comma</em>. For TSV files, this option is ignored and <em>tab</em> is used as a
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57 delimiter.</p>
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58 </dd>
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59 <dt><strong><strong>-l, --label</strong> <em>yes | no</em></strong></dt>
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60 <dd>
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61 <p>First line contains column labels. Possible values: <em>yes or no</em>. Default value: <em>yes</em>.</p>
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62 </dd>
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63 <dt><strong><strong>-o, --overwrite</strong></strong></dt>
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64 <dd>
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65 <p>Overwrite existing files.</p>
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66 </dd>
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67 <dt><strong><strong>--outdelim</strong> <em>comma | tab | semicolon</em></strong></dt>
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68 <dd>
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69 <p>Output text file delimiter. Possible values: <em>comma, tab, or semicolon</em>
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70 Default value: <em>comma</em>.</p>
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71 </dd>
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72 <dt><strong><strong>-q, --quote</strong> <em>yes | no</em></strong></dt>
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73 <dd>
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74 <p>Put quotes around column values in output text file. Possible values: <em>yes or
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75 no</em>. Default value: <em>yes</em>.</p>
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76 </dd>
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77 <dt><strong><strong>-r, --root</strong> <em>rootname</em></strong></dt>
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78 <dd>
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79 <p>New text file name is generated using the root: <Root>.<Ext>. Default file
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80 name: <FirstTextFileName>1To<Count>Joined.<Ext>. The csv, and tsv
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81 <Ext> values are used for comma/semicolon, and tab delimited text files
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82 respectively.</p>
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83 </dd>
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84 <dt><strong><strong>-w, --workingdir</strong> <em>dirname</em></strong></dt>
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85 <dd>
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86 <p>Location of working directory. Default: current directory.</p>
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87 </dd>
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88 </dl>
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89 <p>
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90 </p>
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91 <h2>EXAMPLES</h2>
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92 <p>To join CSV text files, type:</p>
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93 <div class="ExampleBox">
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94 % JoinTextFiles.pl -o Sample1.csv Sample2.csv
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95 <br/>% JoinTextFiles.pl -o *.csv</div>
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96 <p>To join Sample*.tsv TSV text files into a NewSample.tsv file, type:</p>
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97 <div class="ExampleBox">
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98 % JoinTextFiles.pl -o -r NewSample Sample*.tsv</div>
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99 <p>
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100 </p>
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101 <h2>AUTHOR</h2>
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102 <p><a href="mailto:msud@san.rr.com">Manish Sud</a></p>
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103 <p>
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104 </p>
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105 <h2>SEE ALSO</h2>
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106 <p><a href="./MergeTextFiles.html">MergeTextFiles.pl</a>, <a href="./ModifyTextFilesFormat.html">ModifyTextFilesFormat.pl</a>, <a href="./SplitTextFiles.html">SplitTextFiles.pl</a>
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107 </p>
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108 <p>
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109 </p>
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110 <h2>COPYRIGHT</h2>
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111 <p>Copyright (C) 2015 Manish Sud. All rights reserved.</p>
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112 <p>This file is part of MayaChemTools.</p>
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113 <p>MayaChemTools is free software; you can redistribute it and/or modify it under
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114 the terms of the GNU Lesser General Public License as published by the Free
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115 Software Foundation; either version 3 of the License, or (at your option)
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116 any later version.</p>
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117 <p> </p><p> </p><div class="DocNav">
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118 <table width="100%" border=0 cellpadding=0 cellspacing=2>
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119 <tr align="left" valign="top"><td width="33%" align="left"><a href="./JoinSDFiles.html" title="JoinSDFiles.html">Previous</a> <a href="./index.html" title="Table of Contents">TOC</a> <a href="./MACCSKeysFingerprints.html" title="MACCSKeysFingerprints.html">Next</a></td><td width="34%" align="middle"><strong>March 29, 2015</strong></td><td width="33%" align="right"><strong>JoinTextFiles.pl</strong></td></tr>
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120 </table>
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121 </div>
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122 <br />
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123 <center>
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124 <img src="../../images/h2o2.png">
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125 </center>
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