Mercurial > repos > deepakjadmin > caret_tool3
view tool3V2.xml @ 5:e94ce42bb943 draft default tip
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author | deepakjadmin |
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date | Fri, 31 Mar 2017 03:37:14 -0400 |
parents | 9c0e0cc778f8 |
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<tool id="dffedssfopp12sdf" name="Predict Activity"> <description> used to predict activity based on given model </description> <!--command interpreter="bash">step3run.sh $file1 $model $output1 2>/dev/null </command--> <requirements> <requirement type="set_environment">CARET_TOOL3_PATH</requirement> <requirement type="set_environment">R_ROOT_DIR</requirement> <requirement type="package" version="3.2.0">R</requirement> <requirement type="package" version="1.0.0">caret-tools</requirement> </requirements> <command interpreter="Rscript">Preold_advance.R $file1 $model $output1 2>/dev/null </command> <inputs> <param name="model" type="data" label="Select Model" help="Select built model obtained from caret tool 'Create script from the template file'." /> <param name="file1" format="csv" type="data" label="Select file have descriptor data for activity prediction" help="csv format" /> </inputs> <outputs> <data format="txt" name="output1" label="Prediction on $file1.name" /> </outputs> <help> .. class:: infomark Make sure this file **must** contain **all** or **more features** than **input** "csv file" used for **model building** ---------- **Input "csv file" must be as follows** ---------- Example file:- # example.csv feature1,feature2,feature3,..,featureN ro1 234,2.3,34,7,..,0.9 ro2 432,3.4,23.1,12,..,0.12 ro3 692,23,12.2,19,..,0.14 ----------- **MODEL** Choose model file received from model building step. Model file has "data" file format can be seen by clicking on output files shown in history . </help> </tool>