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# Copyright (C) 2014 INRA
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program.  If not, see <http://www.gnu.org/licenses/>.
#
#
#This is a sample file that enables tools FROGS_affiliations_postprocess to solve
#inclusive amplicon sequence by selecting the smallest reference among multihit
#You will need to create or download exact amplicon sequence reference fasta file
#download link : http://genoweb.toulouse.inra.fr/frogs_databanks/HVL_reference
#Finally you will need to create HVL_db.loc file similar to this one in your galaxy
#tool-data directory.The HVL_db.loc file has this format (longer white space characters are
#TAB characters):
#
#<unique_database_name>    <name>    <file_path>
#
#First column will be the visible name in galaxy.
#So, for example, if you have  UNITE 7.1 ITS1 (only!) stored 
#in /galaxy_databanks/ITS/UNITE_7.1/UNITE_ITS1.fasta 
#then the HVL_db.loc entry would look like this:
#
#
# EXAMPLE FOR TEST :
#Unite_extract_ITS1_test	Unite_extract_ITS1_test	${__HERE__}/HVL_db_data/Unite_extract_ITS1.fasta