view data_manager_conf.xml @ 11:0cc5f020640e draft default tip

planemo upload commit b0ebe74a020dcb21b79d8d39e7b6a2f6533b2fc4-dirty

<?xml version="1.0"?>
<data_managers>
    <data_manager tool_file="data_manager/FROGS_data_manager.xml" id="frogs_data_manager">
        <data_table name="frogs_db">
<output>
                <column name="value" />
                <column name="name" />
                <column name="path" output_ref="output">
                    <move type="directory" relativize_symlinks="False">
                        <source>#echo "/".join(str($path).split('/')[:-1])#</source>
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">frogs_db/#echo str($path).split('/')[-2]#/</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/frogs_db/#echo "/".join(str($path).split('/')[-2:])#</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
        </data_table>
        <data_table name="HVL_db">
            <output>
                <column name="value"/>
                <column name="name" />
                <column name="path" output_ref="output" >
                    <move type="file">
                        <!--source>${path}/${value}.tsv</source-->
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">HVL_db/</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/HVL_db/${value}.fasta</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
        </data_table>
    </data_manager>
</data_managers>