Mercurial > repos > dchristiany > data_manager_proteore
view data_manager_conf.xml @ 6:9c75521e4a64 draft
planemo upload commit d703392579d96e480c6461ce679516b12cefb3de-dirty
author | dchristiany |
---|---|
date | Fri, 19 Oct 2018 04:19:36 -0400 |
parents | ab5a054b90a2 |
children | d16a52bf0e5b |
line wrap: on
line source
<?xml version="1.0"?> <data_managers> <data_manager tool_file="data_manager/resource_building.xml" id="resource_building"> <data_table name="proteinatlas"> <output> <column name="value" /> <column name="name" /> <column name="path" output_ref="output" > <move type="file"> <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">proteinatlas/${path}</target> </move> <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/proteinatlas/${path}</value_translation> <value_translation type="function">abspath</value_translation> </column> </output> </data_table> <data_table name="peptide_atlas"> <output> <column name="tissue" /> <column name="name" /> <column name="value" output_ref="output" > <move type="file"> <!--source>${path}/${value}.tsv</source--> <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">peptide_atlas/</target> </move> <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/peptide_atlas/${tissue}.tsv</value_translation> <value_translation type="function">abspath</value_translation> </column> </output> </data_table> <data_table name="id_mapping"> <output> <column name="value" /> <column name="name" /> <column name="path" output_ref="output" > <move type="file"> <!--source>${path}</source--> <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">id_mapping/</target> </move> <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/id_mapping/${value}.tsv</value_translation> <value_translation type="function">abspath</value_translation> </column> </output> </data_table> </data_manager> </data_managers>