Mercurial > repos > davidvanzessen > report_clonality_igg
changeset 9:712f3e9924d5 draft
Uploaded
| author | davidvanzessen |
|---|---|
| date | Wed, 26 Mar 2014 11:55:13 -0400 |
| parents | e2972f0935e9 |
| children | 06777331fbd8 |
| files | r_wrapper.sh |
| diffstat | 1 files changed, 3 insertions(+), 0 deletions(-) [+] |
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--- a/r_wrapper.sh Wed Mar 26 11:55:07 2014 -0400 +++ b/r_wrapper.sh Wed Mar 26 11:55:13 2014 -0400 @@ -24,6 +24,7 @@ echo "<link rel='stylesheet' type='text/css' href='style.css'></head>" >> $outputFile echo "<div class='tabber'><div class='tabbertab' title='Gene frequencies'>" >> $outputFile +echo "<img src='CDR3LengthPlot.png'/><br />" >> $outputFile echo "<img src='VFPlot.png'/>" >> $outputFile echo "<img src='DFPlot.png'/>" >> $outputFile echo "<img src='JFPlot.png'/>" >> $outputFile @@ -106,6 +107,8 @@ echo "<tr><td>The dataset used to generate the frequency graphs and the heatmaps (Unique based on clonaltype, $clonalType)</td><td><a href='allUnique.csv'>Download</a></td></tr>" >> $outputFile echo "<tr><td>The dataset used to calculate clonality score (Unique based on clonaltype, $clonalType)</td><td><a href='clonalityComplete.csv'>Download</a></td></tr>" >> $outputFile +echo "<tr><td>The dataset used to generate the CDR3 length frequency graph</td><td><a href='CDR3LengthPlot.csv'>Download</a></td></tr>" >> $outputFile + echo "<tr><td>The dataset used to generate the V gene family frequency graph</td><td><a href='VFFrequency.csv'>Download</a></td></tr>" >> $outputFile echo "<tr><td>The dataset used to generate the D gene family frequency graph</td><td><a href='DFFrequency.csv'>Download</a></td></tr>" >> $outputFile echo "<tr><td>The dataset used to generate the J gene family frequency graph</td><td><a href='JFFrequency.csv'>Download</a></td></tr>" >> $outputFile