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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <set_environment version="1.0">
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4 </set_environment>
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5
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1
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6 <package name="igBlastn" version="1.0.0">
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7 <install version="1.0">
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8 <actions>
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9 <action type="download_by_url">ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/1.0.0/ncbi-igblast-1.0.0-x64-linux.tar.gz</action>
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2
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10 <action type="move_file">
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11 <source>ncbi-igblast-1.0.0-x64-linux.tar.gz</source>
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12 <destination>$INSTALL_DIR</destination>
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13 </action>
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4
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14 <action type="make_directory">
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15 $INSTALL_DIR/igblast
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16 </action>
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17 <action type="shell_command">tar -zxvf $INSTALL_DIR/ncbi-igblast-1.0.0-x64-linux.tar.gz -C $INSTALL_DIR/igblast</action>
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18
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19 <action type="set_environment">
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4
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20 <environment_variable name="IGDATA" action="set_to">$INSTALL_DIR/igblast</environment_variable>
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0
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21 </action>
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22 </actions>
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23 </install>
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24 <readme>
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25 Installs R with apt-get.
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26 </readme>
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27 </package>
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28 </tool_dependency>
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29
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