Mercurial > repos > davidvanzessen > baseline_fasta_generator

comparison baseline_generator.xml @ 1:85f18c2f74dd draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author davidvanzessen
date Tue, 15 Jul 2014 09:05:46 -0400
parents 91221003f5ee
children be17e1e7dc2b
comparison
equal deleted inserted replaced
0:91221003f5ee 1:85f18c2f74dd
2 <description>Generate baseline fasta file</description> 2 <description>Generate baseline fasta file</description>
3 <command interpreter="python"> 3 <command interpreter="python">
4 script.py --input $in_file --ref $reference --output $out_file 4 script.py --input $in_file --ref $reference --output $out_file
5 </command> 5 </command>
6 <inputs> 6 <inputs>
7 <param name="in_file" type="data" label="Input fasta file" /> 7 <param name="in_file" type="data" label="Input excel file" />
8 <param name="reference" type="data" format="fasta" label="Reference fasta file" /> 8 <param name="reference" type="data" format="fasta" label="Reference fasta file" />
9 </inputs> 9 </inputs>
10 <outputs> 10 <outputs>
11 <data format="fasta" name="out_file" label = "Baseline generator on $in_file.name with $reference.name"/> 11 <data format="fasta" name="out_file" label = "Baseline generator on $in_file.name with $reference.name"/>
12 </outputs> 12 </outputs>