Mercurial > repos > davidvanzessen > argalaxy_tools

changeset 27:0bbe16ed6b45 draft

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Uploaded
author davidvanzessen
date Mon, 11 Jan 2016 08:05:06 -0500
parents 12e7f512acce
children 15366f07dcf6
files complete_immunerepertoire.xml report_clonality_igg.xml tool_dependencies.xml
diffstat 3 files changed, 6 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/complete_immunerepertoire.xml	Mon Jan 11 08:03:00 2016 -0500
+++ b/complete_immunerepertoire.xml	Mon Jan 11 08:05:06 2016 -0500
@@ -115,6 +115,8 @@
 	<requirements>
 		<requirement type="package" version="0.6">igblastwrp</requirement>
 		<requirement type="package" version="3.3">weblogo</requirement>
+		<requirement type="package" version="0.67">circos</requirement>
+		<requirement type="package" version="0.20">circos_tools</requirement>
 	</requirements>
 	<help>
 		The entire Immune Repertoire pipeline as a single tool, input several FASTA files or IMGT zip/txz files, give them an ID and it will BLAST/parse, merge and plot them.
--- a/report_clonality_igg.xml	Mon Jan 11 08:03:00 2016 -0500
+++ b/report_clonality_igg.xml	Mon Jan 11 08:05:06 2016 -0500
@@ -101,6 +101,8 @@
 	</outputs>
 	<requirements>
 		<requirement type="package" version="3.3">weblogo</requirement>
+		<requirement type="package" version="0.67">circos</requirement>
+		<requirement type="package" version="0.20">circos_tools</requirement>
 	</requirements>
 	<help>		
 **INPUT**
--- a/tool_dependencies.xml	Mon Jan 11 08:03:00 2016 -0500
+++ b/tool_dependencies.xml	Mon Jan 11 08:05:06 2016 -0500
@@ -28,10 +28,10 @@
     <package name="weblogo" version="3.3">
       <repository changeset_revision="18cb94906560" name="package_weblogo_3_3" owner="devteam" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
-    <package name="weblogo" version="3.3">
+    <package name="circos" version="0.67">
 	  <repository changeset_revision="e357464797ad" name="package_circos_0_67_5" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
-    <package name="weblogo" version="3.3">
+    <package name="circos_tools" version="0.20">
       <repository changeset_revision="c9392d893389" name="package_circostools_0_20" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>