Mercurial > repos > davidvanzessen > argalaxy_tools
changeset 9:079eed22fdb6 draft
Uploaded
author | davidvanzessen |
---|---|
date | Thu, 30 Jul 2015 10:00:08 -0400 |
parents | 34d5e6df3247 |
children | edbf4fba5fc7 |
files | igblast/igblast.sh |
diffstat | 1 files changed, 1 insertions(+), 1 deletions(-) [+] |
line wrap: on
line diff
--- a/igblast/igblast.sh Thu Jul 30 09:56:17 2015 -0400 +++ b/igblast/igblast.sh Thu Jul 30 10:00:08 2015 -0400 @@ -10,6 +10,6 @@ echo "$input $species $locus $output" -java -Xmx64G -jar $IGBLASTWRP/igblastwrp.jar -cf -S $species -R $locus ${input} $PWD/blasted_output +java -Xmx64G -jar $IGBLASTWRP/igblastwrp.jar -cf -S $species -R $locus ${input} $PWD/blasted_output 2>&1 Rscript --verbose $dir/igblast.r "$PWD/blasted_output.L2.txt" "$output" 2>&1