Mercurial > repos > david-hoover > mirdeep2_and_targetspy

annotate env.sh @ 0:1bdefe8a8676 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author david-hoover
date Fri, 18 Jul 2014 13:55:59 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
1bdefe8a8676 Uploaded
david-hoover
parents:
diff changeset
1 bowtie_build_wrapper.pl:$ENV{PATH} .= ":/usr/local/apps/mirdeep2/2.0.0.5:/usr/local/apps/bowtie/0.12.9:/usr/local/apps/viennarna/current/bin:/usr/local/randfold-2.0/bin";
1bdefe8a8676 Uploaded
david-hoover
parents:
diff changeset
2 mapper_wrapper.pl:$ENV{PATH} .= ":/usr/local/apps/mirdeep2/2.0.0.5:/usr/local/apps/bowtie/0.12.9:/usr/local/apps/viennarna/current/bin:/usr/local/randfold-2.0/bin";
1bdefe8a8676 Uploaded
david-hoover
parents:
diff changeset
3 mirdeep2_wrapper.pl:$ENV{PATH} .= ":/usr/local/apps/mirdeep2/2.0.0.5:/usr/local/apps/bowtie/0.12.9:/usr/local/apps/viennarna/current/bin:/usr/local/randfold-2.0/bin";
1bdefe8a8676 Uploaded
david-hoover
parents:
diff changeset
4 target_spy_wrapper.sh:export PATH=/data/galaxy/appList/ViennaRNA/1.6.1/bin:/data/galaxy/appList/TargetSpy/bin:$PATH