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changeset 29:77c0583db74f draft

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Uploaded
author david-hoover
date Thu, 20 Sep 2012 10:08:03 -0400
parents d18608117254
children 4fa715d44c26
files variant_annotator.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/variant_annotator.xml	Thu Sep 20 10:04:27 2012 -0400
+++ b/variant_annotator.xml	Thu Sep 20 10:08:03 2012 -0400
@@ -458,7 +458,7 @@
     <param name="mendel_violation_genotype_quality_threshold" type="float" value="0.0" label="genotype quality treshold in order to annotate mendelian violation ratio." help="-mvq,--MendelViolationGenotypeQualityThreshold &amp;lt;MendelViolationGenotypeQualityThreshold&amp;gt;"/>
     <param name="exclude_annotations" type="select" multiple="True" display="checkboxes" label="Annotations to exclude" help="-XA,--excludeAnnotation &amp;lt;excludeAnnotation&amp;gt;" >
       <!-- load the available annotations from an external configuration file, since additional ones can be added to local installs -->
-      <options from_data_table="gatk_annotations">
+      <options from_data_table="gatk2_annotations">
         <filter type="multiple_splitter" column="tools_valid_for" separator=","/>
         <filter type="static_value" value="VariantAnnotator" column="tools_valid_for"/>
       </options>