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author dave
date Mon, 10 Jun 2019 16:04:10 -0400
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>K03455|HIVHXB2CG_418_930_3_0_0_1_0_0_14/1
------------------------------------------------------------
--------------------GATCCTGC-------------ATATAAGCAGCAGCTTTTT
GCCTTTACTGGTTCTCTCTGGTTAGACCAGATCTGAGCCTGGG-----------------
------
>K03455|HIVHXB2CG_7976_8475_3_0_0_1_0_0_61/1
------------------------------------------------------------
-------------------CAGATACCT-------------AAATGATCAACAGCTCCTG
GGGATT-TGGGGTTGCTCTGGAAAACTCATTTGCACCCCTGCT-----------------
------
>K03455|HIVHXB2CG_7932_8405_1_0_0_1_0_0_17/1
GTCTGG----------------------------GGCATCAAGCAGCTCCAGG-------
CAAGAATGCTGGCTGTGGAAAGATACCT-------------AAAGGATCAACAGCTCC--
------------------------------------------------------------
------
>K03455|HIVHXB2CG_6869_7379_1_0_0_3_0_1_11/1
------------------------------------------------------------
-----------ACAGTAGAAAAATTCCCCTCCACCATTAAAACTGTGGTTACAATATC--
-------TGGGTCCCCTCC-------------TGAGGATTGGT-----------------
------
>K03455|HIVHXB2CG_6865_7379_1_0_0_0_0_1_4d/1
------------------------------------------------------------
-----------ACAGTAGAAAAATTCCCCTCCACAATTAAAACTGTGGTTACAATTTC--
-------TGGGTCCCCTCC-------------TGAGGATTGCT-----------------
------
>K03455|HIVHXB2CG_8069_8641_1_0_0_0_0_0_38/1
TCCTG----------------------------------------ACTCCAA--------
----------TACTGTAGGAGATTCCAC-----------------------CAATATT--
-------TGAGGGCTTCCCACCCCCTGCGTCCCAGAAGTT--------------------
------
>K03455|HIVHXB2CG_6040_6545_1_0_0_0_0_0_2/1
--------------------------------------------ATCCTCAT--------
-----GCATCTGTTCTACCATGTCATTTTT-----------CCACATGTTAAAATTTTCT
GT-----CACATTTAC---CAATACT----------------------------------
------
>K03455|HIVHXB2CG_6480_6947_0_0_0_2_0_0_32/1
--------------------------------------------TT--------------
-------GGTAAATGTGACAGAAAATTTTA-----------ACATGTGGAAAAATGACAT
GG-----TAGA---AC---AGATGCA----------------------TGAGGATATAA-
------
>K03455|HIVHXB2CG_6482_6962_0_0_0_1_0_0_35/1
------------------------------------------------------------
-------GGTAAATGTGACAGAAAATTTTA-----------ACATGTGGAAAAATGACAT
GG-----TAGA---AC---AGATGCA----------------------TGAGGATATAAT
-----C
>K03455|HIVHXB2CG_5990_6505_1_0_0_0_0_0_3f/1
------------------------------------------------------------
------------------------------------------------TTAAAATTTTCT
GT-----CACATTTAC---CAATACTACTTCTTGTGGGTTGGGGTCTGTGGGTACACAGG
CATGTG
>K03455|HIVHXB2CG_2700_3243_0_0_0_3_1_0_51/1
------------------------------------------------------------
------CACCCATCCAAAGGAATTGAGGTT-----------CTTT---CTGATGTTTTTT
GT-----CTGGTGTGG---TAAGTCCCCACCTCGACAG----------------------
------
>K03455|HIVHXB2CG_313_880_0_0_0_2_0_0_54/1
CTTTA----------------------------------TATTTTTTCTTAC--------
-----CCCCTGGCCTTAACCGAATTTTTTC-----------CCATCGATCTAATTCTCC-
-------CCCGCTTAA--------------------------------------------
------
>K03455|HIVHXB2CG_121_652_1_0_0_0_0_0_5f/1
TCC------------------------------------CTGTTCG--------------
-------GGCGCCACTGCTAGAGATTTTCC-----------ACACTGACTAAAAGGGTCT
GA-----GGGA---TCTCTAGTTACC----------------------------------
------
>K03455|HIVHXB2CG_6045_6577_2_0_0_1_0_0_47/1
----------------------------------AGTAAGTAGTACCTGTAAC--GCAAC
CTATACCAATAG-TAGCAATAGTAGCATTA-----------GTAGTAGCACTAATAAT--
------------------------------------------------------------
------
>K03455|HIVHXB2CG_6065_6509_1_0_0_1_0_0_3a/1
--------------------------------------------------------CAAC
CTATACCAATAG-TAGCAATAGTAGCATTA-----------GTAGTAGCAATAATAATAG
CAATAGTTGAGTGGTC--------------------------------------------
CA----
>K03455|HIVHXB2CG_4276_4897_1_0_0_1_0_0_3d/1
ACAGTAA----TTGGAG--------------AGCAATGGCTAGTGATTTTAACCTGCCAC
CTGTAGTAGCAA-AAGAAATAGTAGCCCG-------------------------------
------------------------------------------------------------
------
>K03455|HIVHXB2CG_3823_4361_1_0_0_0_0_0_30/1
------------------------------------------------------------
-TATGGTACCAGTTAGAGAAAGAACCCCTA-----------GTAGGAGCAGAAACCTTCT
ATGTAGATGGGGCAGC--------------------------------------------
TAACAG
>K03455|HIVHXB2CG_4457_4958_4_0_0_0_0_0_44/1
-------------------------------------AGTTCATGTATCCAGT-------
---GGATATATAGAAGCAGAAGTTATTCCAGCAGAAACAGGGGCTGAAACAGCATAT---
------------------------------------------------------------
------
>K03455|HIVHXB2CG_4420_4903_1_0_0_1_0_0_31/1
ATTGTACACATTTAGAATGAAAAGTTATCCTGGTAGCAGTTCATGTAGCCAGT-------
---GGATATATAGAAGCAGA----------------------------------------
------------------------------------------------------------
------
>K03455|HIVHXB2CG_4476_4938_5_0_0_3_0_0_2b/1
------------------------------------------------------------
------TATAAAGACGCAGAAGTTATTCCAGCATACACAGGGCAGGAAACAGCATATTTT
CTTTT--CAAATTAG-----------------------------CAG-------------
------
>K03455|HIVHXB2CG_4053_4544_2_0_0_2_0_0_52/1
------------------------------------------------------------
------TGCTAA-----------------------------TTTTAAAAGACAATATTCT
GTTTC--CTGCCCTGTTTCTGCTGGAATAACTTCTGCTTCTATATAT-------------
------