Mercurial > repos > dave > pipelign
diff test-data/files/NODE_7.aln @ 0:9a3a2e04f47a draft default tip
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author | dave |
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date | Mon, 10 Jun 2019 16:04:10 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/files/NODE_7.aln Mon Jun 10 16:04:10 2019 -0400 @@ -0,0 +1,48 @@ +>K03455|HIVHXB2CG_2928_3444_5_0_0_1_0_0_5d/1 +CTTCTTCTGTTAGTGGTATTACTTCTGTTAGTGCTTTGGTACCTCTAAGGAGTTTACATA +A------TTGCCTTAC-------------------------------------------- +----------------------------------- +>K03455|HIVHXB2CG_2832_3397_3_0_0_2_0_0_9/1 +-----------------------------------------------AGGATTTTACATA +A------TTGCCTTACTTAAATCCCTGGGTAAATCTGACTTGCCCAATTCAATTTCCCCA +----------------CTA---------------- +>K03455|HIVHXB2CG_7233_7687_1_0_0_1_0_0_5a/1 +--------------------------------------------ACTTTATATTTATATA +A------TTCACTTCTCCAATTGTCC----------------CTCATCTCTCCTCCTCCA +GGTCTGAAG---ATCTCGG---------------- +>K03455|HIVHXB2CG_7273_7731_1_0_0_5_0_0_6/1 +TCTTTGCCTTGGTTGGAGCAACTCCTAATGGTTGAATTTTTACTACTTTATATTTATATA +A------TTCCCTTCT-------------------------------------------- +----------------------------------- +>K03455|HIVHXB2CG_8342_8779_1_0_0_2_0_0_40/1 +------------------------------------------------------TCCAAG +-----CCCTGTCTTATTCTTCTAGGTATGTGGCGCATAGCTCTACAAGCTCCTTGTACTA +CTTCAATAA-------------------------- +>K03455|HIVHXB2CG_8349_8802_1_0_0_0_0_0_29/1 +------------------------------ACCCATCTTATAGCA-AAATCCTTTCCAAG +-----CCCTGTCTTATTCTTCTAGGTATGTGGCGAATAGCTCTACA-------------- +----------------------------------- +>K03455|HIVHXB2CG_1235_1682_3_0_0_0_0_0_56/1 +-----------------------------------------TCTACATAGTCTCTAAAGG +GTTCCTTTGGTCCTTGTCTTATGTCCAGAATGCTGGTAGGGCT---------AT------ +---ACATTC-------------------------- +>K03455|HIVHXB2CG_5438_5909_1_0_0_4_0_0_7/1 +-----------------------------------------AATA-GCAATTTGTACAAG +-------CAGTTTTAGGCTGACTTCGTGGATGCTTCCAGGGCT---------CTCGTCTA +-GGATCAAC-------------------------- +>K03455|HIVHXB2CG_6619_7094_0_0_0_2_0_0_41/1 +-----------------------------------------TGTG-TTCAGCTGTACTAT +-------TATGGTTATAGCATTTTCCGTGAAATTGACAGATCTAATTACTACCTCTTCT- +----------------------------------- +>K03455|HIVHXB2CG_5574_6092_2_0_0_1_0_0_5/1 +------------------------------------------------------------ +-----------CTACTATTGCTACTAATGGTATAGGTTGCGTTACATGTACTACTTACTG +CTTTGATAGAGAAGCTTGAT--------------G +>K03455|HIVHXB2CG_7126_7621_1_1_1_3_1_0_26/1 +---------TCGGAGTCATTGTTGCTATTACCACCATCTTTTGTTCATAGCAGCCCTGTA +A------TATTTGATT-------------------------------------------- +-----------AACATCTAA--------------- +>K03455|HIVHXB2CG_3596_4110_1_0_0_2_0_0_59/1 +----------------------TTTGATTG--ACTAACTCTGATTCACTTTGATCTTGTA +G------TGCTTGAAT-------------------------------------------- +-----------GATTCCTAATGCATATTGTGAGTC