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diff test-data/files/NODE_7.aln @ 0:9a3a2e04f47a draft default tip

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author dave
date Mon, 10 Jun 2019 16:04:10 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/files/NODE_7.aln	Mon Jun 10 16:04:10 2019 -0400
@@ -0,0 +1,48 @@
+>K03455|HIVHXB2CG_2928_3444_5_0_0_1_0_0_5d/1
+CTTCTTCTGTTAGTGGTATTACTTCTGTTAGTGCTTTGGTACCTCTAAGGAGTTTACATA
+A------TTGCCTTAC--------------------------------------------
+-----------------------------------
+>K03455|HIVHXB2CG_2832_3397_3_0_0_2_0_0_9/1
+-----------------------------------------------AGGATTTTACATA
+A------TTGCCTTACTTAAATCCCTGGGTAAATCTGACTTGCCCAATTCAATTTCCCCA
+----------------CTA----------------
+>K03455|HIVHXB2CG_7233_7687_1_0_0_1_0_0_5a/1
+--------------------------------------------ACTTTATATTTATATA
+A------TTCACTTCTCCAATTGTCC----------------CTCATCTCTCCTCCTCCA
+GGTCTGAAG---ATCTCGG----------------
+>K03455|HIVHXB2CG_7273_7731_1_0_0_5_0_0_6/1
+TCTTTGCCTTGGTTGGAGCAACTCCTAATGGTTGAATTTTTACTACTTTATATTTATATA
+A------TTCCCTTCT--------------------------------------------
+-----------------------------------
+>K03455|HIVHXB2CG_8342_8779_1_0_0_2_0_0_40/1
+------------------------------------------------------TCCAAG
+-----CCCTGTCTTATTCTTCTAGGTATGTGGCGCATAGCTCTACAAGCTCCTTGTACTA
+CTTCAATAA--------------------------
+>K03455|HIVHXB2CG_8349_8802_1_0_0_0_0_0_29/1
+------------------------------ACCCATCTTATAGCA-AAATCCTTTCCAAG
+-----CCCTGTCTTATTCTTCTAGGTATGTGGCGAATAGCTCTACA--------------
+-----------------------------------
+>K03455|HIVHXB2CG_1235_1682_3_0_0_0_0_0_56/1
+-----------------------------------------TCTACATAGTCTCTAAAGG
+GTTCCTTTGGTCCTTGTCTTATGTCCAGAATGCTGGTAGGGCT---------AT------
+---ACATTC--------------------------
+>K03455|HIVHXB2CG_5438_5909_1_0_0_4_0_0_7/1
+-----------------------------------------AATA-GCAATTTGTACAAG
+-------CAGTTTTAGGCTGACTTCGTGGATGCTTCCAGGGCT---------CTCGTCTA
+-GGATCAAC--------------------------
+>K03455|HIVHXB2CG_6619_7094_0_0_0_2_0_0_41/1
+-----------------------------------------TGTG-TTCAGCTGTACTAT
+-------TATGGTTATAGCATTTTCCGTGAAATTGACAGATCTAATTACTACCTCTTCT-
+-----------------------------------
+>K03455|HIVHXB2CG_5574_6092_2_0_0_1_0_0_5/1
+------------------------------------------------------------
+-----------CTACTATTGCTACTAATGGTATAGGTTGCGTTACATGTACTACTTACTG
+CTTTGATAGAGAAGCTTGAT--------------G
+>K03455|HIVHXB2CG_7126_7621_1_1_1_3_1_0_26/1
+---------TCGGAGTCATTGTTGCTATTACCACCATCTTTTGTTCATAGCAGCCCTGTA
+A------TATTTGATT--------------------------------------------
+-----------AACATCTAA---------------
+>K03455|HIVHXB2CG_3596_4110_1_0_0_2_0_0_59/1
+----------------------TTTGATTG--ACTAACTCTGATTCACTTTGATCTTGTA
+G------TGCTTGAAT--------------------------------------------
+-----------GATTCCTAATGCATATTGTGAGTC