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comparison test-data/files/NODE_7.aln @ 0:9a3a2e04f47a draft default tip

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author dave
date Mon, 10 Jun 2019 16:04:10 -0400
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-1:000000000000 0:9a3a2e04f47a
1 >K03455|HIVHXB2CG_2928_3444_5_0_0_1_0_0_5d/1
2 CTTCTTCTGTTAGTGGTATTACTTCTGTTAGTGCTTTGGTACCTCTAAGGAGTTTACATA
3 A------TTGCCTTAC--------------------------------------------
4 -----------------------------------
5 >K03455|HIVHXB2CG_2832_3397_3_0_0_2_0_0_9/1
6 -----------------------------------------------AGGATTTTACATA
7 A------TTGCCTTACTTAAATCCCTGGGTAAATCTGACTTGCCCAATTCAATTTCCCCA
8 ----------------CTA----------------
9 >K03455|HIVHXB2CG_7233_7687_1_0_0_1_0_0_5a/1
10 --------------------------------------------ACTTTATATTTATATA
11 A------TTCACTTCTCCAATTGTCC----------------CTCATCTCTCCTCCTCCA
12 GGTCTGAAG---ATCTCGG----------------
13 >K03455|HIVHXB2CG_7273_7731_1_0_0_5_0_0_6/1
14 TCTTTGCCTTGGTTGGAGCAACTCCTAATGGTTGAATTTTTACTACTTTATATTTATATA
15 A------TTCCCTTCT--------------------------------------------
16 -----------------------------------
17 >K03455|HIVHXB2CG_8342_8779_1_0_0_2_0_0_40/1
18 ------------------------------------------------------TCCAAG
19 -----CCCTGTCTTATTCTTCTAGGTATGTGGCGCATAGCTCTACAAGCTCCTTGTACTA
20 CTTCAATAA--------------------------
21 >K03455|HIVHXB2CG_8349_8802_1_0_0_0_0_0_29/1
22 ------------------------------ACCCATCTTATAGCA-AAATCCTTTCCAAG
23 -----CCCTGTCTTATTCTTCTAGGTATGTGGCGAATAGCTCTACA--------------
24 -----------------------------------
25 >K03455|HIVHXB2CG_1235_1682_3_0_0_0_0_0_56/1
26 -----------------------------------------TCTACATAGTCTCTAAAGG
27 GTTCCTTTGGTCCTTGTCTTATGTCCAGAATGCTGGTAGGGCT---------AT------
28 ---ACATTC--------------------------
29 >K03455|HIVHXB2CG_5438_5909_1_0_0_4_0_0_7/1
30 -----------------------------------------AATA-GCAATTTGTACAAG
31 -------CAGTTTTAGGCTGACTTCGTGGATGCTTCCAGGGCT---------CTCGTCTA
32 -GGATCAAC--------------------------
33 >K03455|HIVHXB2CG_6619_7094_0_0_0_2_0_0_41/1
34 -----------------------------------------TGTG-TTCAGCTGTACTAT
35 -------TATGGTTATAGCATTTTCCGTGAAATTGACAGATCTAATTACTACCTCTTCT-
36 -----------------------------------
37 >K03455|HIVHXB2CG_5574_6092_2_0_0_1_0_0_5/1
38 ------------------------------------------------------------
39 -----------CTACTATTGCTACTAATGGTATAGGTTGCGTTACATGTACTACTTACTG
40 CTTTGATAGAGAAGCTTGAT--------------G
41 >K03455|HIVHXB2CG_7126_7621_1_1_1_3_1_0_26/1
42 ---------TCGGAGTCATTGTTGCTATTACCACCATCTTTTGTTCATAGCAGCCCTGTA
43 A------TATTTGATT--------------------------------------------
44 -----------AACATCTAA---------------
45 >K03455|HIVHXB2CG_3596_4110_1_0_0_2_0_0_59/1
46 ----------------------TTTGATTG--ACTAACTCTGATTCACTTTGATCTTGTA
47 G------TGCTTGAAT--------------------------------------------
48 -----------GATTCCTAATGCATATTGTGAGTC