diff test-data/files/NODE_51.aln @ 0:9a3a2e04f47a draft default tip

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author dave
date Mon, 10 Jun 2019 16:04:10 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/files/NODE_51.aln	Mon Jun 10 16:04:10 2019 -0400
@@ -0,0 +1,64 @@
+>K03455|HIVHXB2CG_9174_9651_1_0_0_0_0_0_4e/1
+CGGGCACAC----------------------------ACT--------ACTTGAAGCACT
+CAAGGCAAGCTTTATTGAGGCTTAAGCAGTGGGTTCCCTAG--TTAGC------------
+-------------------------------------
+>K03455|HIVHXB2CG_9142_9638_2_0_0_2_0_0_3c/1
+-------------------------------------------------CTTGAAGCACT
+CAAGGCAAGCTTTATTGCGGCTTAATCAGTGGGTTCCCTAG--TTAGCCAGA--------
+----------------------------GAGCTCCCA
+>K03455|HIVHXB2CG_8231_8877_0_0_0_3_0_0_25/1
+---------------------------------------------TGCTGCTGGCTCAGC
+TCGTCT---CATTCATTCCCTTACAGTAGGCCATCCAATCACACTACATATT--------
+-------------------------------GACCAC
+>K03455|HIVHXB2CG_8446_8894_4_0_0_3_0_0_10/1
+GCTGCTCCC----------------------------ACCCTATCTTGTGCTGGCTCAGC
+TCGTCT---CATTGTTTCCCTTACAGTAGGCCATCCAATCA-------------------
+-------------------------------------
+>K03455|HIVHXB2CG_5329_5821_2_0_0_2_0_0_43/1
+------------------------------------------------TCCTCTGTCGAG
+TAACGC---CTATTCTGCTATGACGACACCCAATTCTGAAA--CTGGATAAA--------
+--------------------------CAGCAGTTGTT
+>K03455|HIVHXB2CG_7972_8486_1_0_0_0_0_0_e/1
+------------------------------------------------------------
+--------------------TGCCAAGGATCCGTTCACTAA--TCGAATGGA-----TCT
+GTCTCTGTCTCTCTCTCCACCTTCTTCTTCTATTCCT
+>K03455|HIVHXB2CG_2808_3255_0_0_0_1_0_0_22/1
+------------------------------------------------TTCTGGGAAGTT
+CAAT----------------TAGGAATACCACATCCCGCAGGGTTAAAAAAG-----AAA
+AAATCAGT------------------AACAGTACTGG
+>K03455|HIVHXB2CG_3580_4035_1_0_0_0_0_0_3/1
+------------------------------------------------CTATG------T
+TTAC----------------TTCTAATCCCGAATCCTGCAAAGCTAGATAAATTGCTTGT
+AACTCAGTC-----------------TTCTGATTTGT
+>K03455|HIVHXB2CG_9061_9383_1_0_0_4_0_0_3b/1
+C------ACTTATTAAAAGAAAAGGGGGGACTGGAAGGGCTAATTCACTCCCAAAGAAGA
+CAAG----ATATCCTTGATC----------------------------------------
+-------------------------------------
+>K03455|HIVHXB2CG_9067_9580_2_0_0_1_0_0_4c/1
+------------TTAAAAGAAAAGGGGGGACTGGAAGGGCTAATTCACTGCCAAAGAAGA
+CAAG----ATATCCTTGATCTGAGGA----------------------------------
+-------------------------------------
+>K03455|HIVHXB2CG_7_537_2_0_0_1_0_0_1e/1
+-------------------------------------GGCTAATTCACTCCCAACGAAGA
+CAAG----ATATCCTTGATCTGTGGATGTACCACCCACAAG-------------------
+---------------------------GCTACTTCCC
+>K03455|HIVHXB2CG_4165_4569_2_0_0_3_0_0_8/1
+---------------------ACAACGGAATTGG---AGGAAATGAACCAGTAGATAAAT
+TAGT----CAGTGCTGGAATCAGGAAAGTACTATTTTT----------------------
+-------------------------------------
+>K03455|HIVHXB2CG_3703_4231_2_0_0_1_0_0_62/1
+-----------------------AATAGTACTTT---CCTGATTCCAGCACTGACTAAAT
+TATC----TACTTGTTCATTTCCTCCAATTCCTTTGTGTG--------------------
+-------------------------------------
+>K03455|HIVHXB2CG_5977_6467_2_0_0_2_0_0_1/1
+-----------------GAAGAAGCGGAGACAGC---GACGAAGAGCTCATCAGAACAGT
+CAGA----CTCATCAAGCTTCTCAATCAAATCAG--------------------------
+-------------------------------------
+>K03455|HIVHXB2CG_5968_6386_1_0_0_1_0_0_d/1
+--------CTATGGCAGGAAGAAGCGGAGACAGC---GACGAAGAGCTCATCAGAACAGT
+CAGA----CTCATCAAGCTTCTGTA-----------------------------------
+-------------------------------------
+>K03455|HIVHXB2CG_5989_6545_2_0_0_1_0_0_19/1
+-----------------------------ACAGC---GACGAAGAGCTCATCAGAACAGA
+CAGA----CTCATCAAGCTTCTCTATCAAAGCAGTAAGTA--------------------
+----------------------------TTACAT---