Mercurial > repos > dave > pipelign
diff test-data/files/NODE_18.aln @ 0:9a3a2e04f47a draft default tip
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author | dave |
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date | Mon, 10 Jun 2019 16:04:10 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/files/NODE_18.aln Mon Jun 10 16:04:10 2019 -0400 @@ -0,0 +1,48 @@ +>K03455|HIVHXB2CG_1312_1798_2_0_0_1_0_0_a/1 +--------------------------TTATCAGAAGG----------------AGCCACC +CCACAAGATTTAAACACCATGCTACACCC-------AGTGGGGGGACATCAAGCAGCCA- +- +>K03455|HIVHXB2CG_1302_1790_0_0_0_1_0_0_1c/1 +----------------GTTTTCAGCATTATCAGAAGG----------------AGCCACC +CCACAAGATTTAAACACCATGCTAAACAC-------AGTGGGGGGACAT----------- +- +>K03455|HIVHXB2CG_1286_1769_0_0_0_4_0_0_0/1 +CAGAAGTGATACCCATGTTTTCAGCATTATCAGAAGG----------------AGCCACC +CCACAAGATTTAAACACCATGCTAAA---------------------------------- +- +>K03455|HIVHXB2CG_6810_7300_0_0_0_0_0_0_2d/1 +TGT-------------AACACCTCAGTCATTA------CACAGGCCTGTCCAAAGGTATC +CTTTGAGCCAATTCCCATACATTATTGTG------------------------------- +- +>K03455|HIVHXB2CG_6323_6872_1_0_0_2_0_0_50/1 +ATG-------------TATG---------------------GGAATTGGCTGAAAGGATA +CCTTTGGACAGGCCTGAGTAATGACTGAGGTGTTACAA---------CTTGTC------- +- +>K03455|HIVHXB2CG_7609_8146_1_0_0_1_0_0_5e/1 +AA--------------GCTTGTGTAATTGTTAATTTC---TCTGTCCCACTCCATCCAGG +TCGTGTGATTCCAACTCTGTTCCAG--------------------------AG------- +- +>K03455|HIVHXB2CG_2685_3250_0_0_0_0_0_0_46/1 +AA--------------AATTTCAAA----------------------------AATTGGG +CCTGAAAATCCATACAATACTCCAGTATT-TGCCATAAAGAAAAAAGACAGTA------- +- +>K03455|HIVHXB2CG_217_724_2_1_0_2_0_0_36/1 +GC--------------CTGCATGGAATGGATGACCCGGAGAGAGAAGTGTTAGAGTGGAG +GTTTGAGAGCCACCTAGCAATTCA------------------------------------ +- +>K03455|HIVHXB2CG_8325_8818_2_0_0_2_0_0_15/1 +GTA-------------CTTTCTATAGTGAATAGAGTTAGGCAGGTATATTCACCATTATC +GTTTGAGACCCACCTCCCAACCC------------------------------------- +- +>K03455|HIVHXB2CG_756_1235_2_0_0_1_0_0_34/1 +----------------------GGT----------------------------GATATGG +GCTGATGTACCATTTGCCCCTGGATGTTC-TGCACTATAGGGTAATTTTGGCTGACCTGA +T +>K03455|HIVHXB2CG_1835_2322_3_0_0_1_0_0_57/1 +ATAGAG----------CTTCCTTTAGTTGCCCCCCTATCTTTATTGTGACGAGGGGACGT +TGCCAAAGAGTGACCTG--------------------------AGG-------------- +- +>K03455|HIVHXB2CG_2894_3537_2_0_0_0_0_0_18/1 +------------------------------------TTTTTCAGTTCGCTTAGATGAAGA +CTTCAGGCAGTATACTGCATTTACCATACCTAGTATAAACAATGAG-------------- +-