Mercurial > repos > dave > pipelign

comparison test-data/files/pipelign.hmm @ 0:9a3a2e04f47a draft default tip

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author dave
date Mon, 10 Jun 2019 16:04:10 -0400
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-1:000000000000 0:9a3a2e04f47a
1 HMMER3/f [3.2.1 | June 2018]
2 NAME long.0.aln
3 LENG 70
4 MAXL 160
5 ALPH DNA
6 RF no
7 MM no
8 CONS yes
9 CS no
10 MAP yes
11 DATE Tue May 28 13:12:02 2019
12 NSEQ 2
13 EFFN 2.000000
14 CKSUM 2713552590
15 STATS LOCAL MSV -7.8785 0.72075
16 STATS LOCAL VITERBI -9.2080 0.72075
17 STATS LOCAL FORWARD -3.7706 0.72075
18 HMM A C G T
19 m->m m->i m->d i->m i->i d->m d->d
20 COMPO 1.11533 1.40204 1.61408 1.48269
21 1.38629 1.38629 1.38629 1.38629
22 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
23 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
24 1.38629 1.38629 1.38629 1.38629
25 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
27 1.38629 1.38629 1.38629 1.38629
28 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29 3 2.38910 2.82844 0.25233 2.62837 3 g - - -
30 1.38629 1.38629 1.38629 1.38629
31 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
33 1.38629 1.38629 1.38629 1.38629
34 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
36 1.38629 1.38629 1.38629 1.38629
37 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
38 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
39 1.38629 1.38629 1.38629 1.38629
40 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
42 1.38629 1.38629 1.38629 1.38629
43 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
44 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
45 1.38629 1.38629 1.38629 1.38629
46 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
48 1.38629 1.38629 1.38629 1.38629
49 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
50 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
51 1.38629 1.38629 1.38629 1.38629
52 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
53 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
54 1.38629 1.38629 1.38629 1.38629
55 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
56 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
57 1.38629 1.38629 1.38629 1.38629
58 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
59 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
60 1.38629 1.38629 1.38629 1.38629
61 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
62 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
63 1.38629 1.38629 1.38629 1.38629
64 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
65 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
66 1.38629 1.38629 1.38629 1.38629
67 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
68 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
69 1.38629 1.38629 1.38629 1.38629
70 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
71 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
72 1.38629 1.38629 1.38629 1.38629
73 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
74 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
75 1.38629 1.38629 1.38629 1.38629
76 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
77 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
78 1.38629 1.38629 1.38629 1.38629
79 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
80 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
81 1.38629 1.38629 1.38629 1.38629
82 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
83 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
84 1.38629 1.38629 1.38629 1.38629
85 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
86 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
87 1.38629 1.38629 1.38629 1.38629
88 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
89 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
90 1.38629 1.38629 1.38629 1.38629
91 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
92 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
93 1.38629 1.38629 1.38629 1.38629
94 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
95 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
96 1.38629 1.38629 1.38629 1.38629
97 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
98 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
99 1.38629 1.38629 1.38629 1.38629
100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
101 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
102 1.38629 1.38629 1.38629 1.38629
103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
104 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
105 1.38629 1.38629 1.38629 1.38629
106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
107 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
108 1.38629 1.38629 1.38629 1.38629
109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
110 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
111 1.38629 1.38629 1.38629 1.38629
112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
113 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
114 1.38629 1.38629 1.38629 1.38629
115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
116 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
117 1.38629 1.38629 1.38629 1.38629
118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
119 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
120 1.38629 1.38629 1.38629 1.38629
121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
122 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
123 1.38629 1.38629 1.38629 1.38629
124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
125 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
126 1.38629 1.38629 1.38629 1.38629
127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
128 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
129 1.38629 1.38629 1.38629 1.38629
130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
131 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
132 1.38629 1.38629 1.38629 1.38629
133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
134 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
135 1.38629 1.38629 1.38629 1.38629
136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
137 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
138 1.38629 1.38629 1.38629 1.38629
139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
140 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
141 1.38629 1.38629 1.38629 1.38629
142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
143 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
144 1.38629 1.38629 1.38629 1.38629
145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
146 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
147 1.38629 1.38629 1.38629 1.38629
148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
149 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
150 1.38629 1.38629 1.38629 1.38629
151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
152 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
153 1.38629 1.38629 1.38629 1.38629
154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
155 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
156 1.38629 1.38629 1.38629 1.38629
157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
158 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
159 1.38629 1.38629 1.38629 1.38629
160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
161 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
162 1.38629 1.38629 1.38629 1.38629
163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
164 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
165 1.38629 1.38629 1.38629 1.38629
166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
167 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
168 1.38629 1.38629 1.38629 1.38629
169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
170 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
171 1.38629 1.38629 1.38629 1.38629
172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
173 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
174 1.38629 1.38629 1.38629 1.38629
175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
176 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
177 1.38629 1.38629 1.38629 1.38629
178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
179 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
180 1.38629 1.38629 1.38629 1.38629
181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
182 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
183 1.38629 1.38629 1.38629 1.38629
184 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
185 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
186 1.38629 1.38629 1.38629 1.38629
187 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
188 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
189 1.38629 1.38629 1.38629 1.38629
190 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
191 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
192 1.38629 1.38629 1.38629 1.38629
193 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
194 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
195 1.38629 1.38629 1.38629 1.38629
196 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
197 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
198 1.38629 1.38629 1.38629 1.38629
199 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
200 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
201 1.38629 1.38629 1.38629 1.38629
202 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
203 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
204 1.38629 1.38629 1.38629 1.38629
205 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
206 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
207 1.38629 1.38629 1.38629 1.38629
208 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
209 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
210 1.38629 1.38629 1.38629 1.38629
211 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
212 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
213 1.38629 1.38629 1.38629 1.38629
214 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
215 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
216 1.38629 1.38629 1.38629 1.38629
217 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
218 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
219 1.38629 1.38629 1.38629 1.38629
220 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
221 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
222 1.38629 1.38629 1.38629 1.38629
223 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
224 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
225 1.38629 1.38629 1.38629 1.38629
226 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
227 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
228 1.38629 1.38629 1.38629 1.38629
229 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
230 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
231 1.38629 1.38629 1.38629 1.38629
232 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
233 //
234 HMMER3/f [3.2.1 | June 2018]
235 NAME long.1.aln
236 LENG 79
237 MAXL 173
238 ALPH DNA
239 RF no
240 MM no
241 CONS yes
242 CS no
243 MAP yes
244 DATE Tue May 28 13:12:02 2019
245 NSEQ 2
246 EFFN 2.000000
247 CKSUM 620049805
248 STATS LOCAL MSV -7.9531 0.72095
249 STATS LOCAL VITERBI -9.7409 0.72095
250 STATS LOCAL FORWARD -3.6444 0.72095
251 HMM A C G T
252 m->m m->i m->d i->m i->i d->m d->d
253 COMPO 1.15122 1.47367 1.35292 1.62872
254 1.38629 1.38629 1.38629 1.38629
255 0.33647 3.73767 1.33977 1.46634 0.26236 0.00000 *
256 1 1.98342 0.60779 2.04641 1.66785 1 c - - -
257 1.38629 1.38629 1.38629 1.38629
258 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
259 2 1.91091 1.78233 1.95844 0.61114 2 t - - -
260 1.38629 1.38629 1.38629 1.38629
261 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
262 3 0.56139 2.08489 1.86185 1.89791 3 a - - -
263 1.38629 1.38629 1.38629 1.38629
264 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
265 4 1.91091 1.78233 1.95844 0.61114 4 t - - -
266 1.38629 1.38629 1.38629 1.38629
267 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
268 5 1.97267 2.25870 0.46443 2.05625 5 g - - -
269 1.38629 1.38629 1.38629 1.38629
270 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
271 6 1.97267 2.25870 0.46443 2.05625 6 g - - -
272 1.38629 1.38629 1.38629 1.38629
273 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
274 7 1.98342 0.60779 2.04641 1.66785 7 c - - -
275 1.38629 1.38629 1.38629 1.38629
276 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
277 8 0.56139 2.08489 1.86185 1.89791 8 a - - -
278 1.38629 1.38629 1.38629 1.38629
279 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
280 9 1.97267 2.25870 0.46443 2.05625 9 g - - -
281 1.38629 1.38629 1.38629 1.38629
282 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
283 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
284 1.38629 1.38629 1.38629 1.38629
285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
286 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
287 1.38629 1.38629 1.38629 1.38629
288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
289 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
290 1.38629 1.38629 1.38629 1.38629
291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
292 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
293 1.38629 1.38629 1.38629 1.38629
294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
295 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
296 1.38629 1.38629 1.38629 1.38629
297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
298 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
299 1.38629 1.38629 1.38629 1.38629
300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
301 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
302 1.38629 1.38629 1.38629 1.38629
303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
304 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
305 1.38629 1.38629 1.38629 1.38629
306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
307 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
308 1.38629 1.38629 1.38629 1.38629
309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
310 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
311 1.38629 1.38629 1.38629 1.38629
312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
313 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
314 1.38629 1.38629 1.38629 1.38629
315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
316 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
317 1.38629 1.38629 1.38629 1.38629
318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
319 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
320 1.38629 1.38629 1.38629 1.38629
321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
322 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
323 1.38629 1.38629 1.38629 1.38629
324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
325 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
326 1.38629 1.38629 1.38629 1.38629
327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
328 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
329 1.38629 1.38629 1.38629 1.38629
330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
331 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
332 1.38629 1.38629 1.38629 1.38629
333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
334 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
335 1.38629 1.38629 1.38629 1.38629
336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
337 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
338 1.38629 1.38629 1.38629 1.38629
339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
340 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
341 1.38629 1.38629 1.38629 1.38629
342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
343 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
344 1.38629 1.38629 1.38629 1.38629
345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
346 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
347 1.38629 1.38629 1.38629 1.38629
348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
349 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
350 1.38629 1.38629 1.38629 1.38629
351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
352 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
353 1.38629 1.38629 1.38629 1.38629
354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
355 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
356 1.38629 1.38629 1.38629 1.38629
357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
358 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
359 1.38629 1.38629 1.38629 1.38629
360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
361 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
362 1.38629 1.38629 1.38629 1.38629
363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
364 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
365 1.38629 1.38629 1.38629 1.38629
366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
367 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
368 1.38629 1.38629 1.38629 1.38629
369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
370 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
371 1.38629 1.38629 1.38629 1.38629
372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
373 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
374 1.38629 1.38629 1.38629 1.38629
375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
376 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
377 1.38629 1.38629 1.38629 1.38629
378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
379 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
380 1.38629 1.38629 1.38629 1.38629
381 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
382 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
383 1.38629 1.38629 1.38629 1.38629
384 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
385 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
386 1.38629 1.38629 1.38629 1.38629
387 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
388 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
389 1.38629 1.38629 1.38629 1.38629
390 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
391 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
392 1.38629 1.38629 1.38629 1.38629
393 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
394 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
395 1.38629 1.38629 1.38629 1.38629
396 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
397 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
398 1.38629 1.38629 1.38629 1.38629
399 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
400 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
401 1.38629 1.38629 1.38629 1.38629
402 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
403 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
404 1.38629 1.38629 1.38629 1.38629
405 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
406 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
407 1.38629 1.38629 1.38629 1.38629
408 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
409 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
410 1.38629 1.38629 1.38629 1.38629
411 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
412 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
413 1.38629 1.38629 1.38629 1.38629
414 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
415 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
416 1.38629 1.38629 1.38629 1.38629
417 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
418 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
419 1.38629 1.38629 1.38629 1.38629
420 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
421 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
422 1.38629 1.38629 1.38629 1.38629
423 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
424 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
425 1.38629 1.38629 1.38629 1.38629
426 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
427 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
428 1.38629 1.38629 1.38629 1.38629
429 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
430 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
431 1.38629 1.38629 1.38629 1.38629
432 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
433 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
434 1.38629 1.38629 1.38629 1.38629
435 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
436 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
437 1.38629 1.38629 1.38629 1.38629
438 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
439 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
440 1.38629 1.38629 1.38629 1.38629
441 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
442 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
443 1.38629 1.38629 1.38629 1.38629
444 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
445 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
446 1.38629 1.38629 1.38629 1.38629
447 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
448 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
449 1.38629 1.38629 1.38629 1.38629
450 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
451 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
452 1.38629 1.38629 1.38629 1.38629
453 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
454 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
455 1.38629 1.38629 1.38629 1.38629
456 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
457 68 1.88401 1.14290 1.03416 1.75097 68 g - - -
458 1.38629 1.38629 1.38629 1.38629
459 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
460 69 1.09289 1.89038 1.88803 1.01509 69 t - - -
461 1.38629 1.38629 1.38629 1.38629
462 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
463 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
464 1.38629 1.38629 1.38629 1.38629
465 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
466 71 1.91091 1.78233 1.95844 0.61114 71 t - - -
467 1.38629 1.38629 1.38629 1.38629
468 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
469 72 1.98342 0.60779 2.04641 1.66785 72 c - - -
470 1.38629 1.38629 1.38629 1.38629
471 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
472 73 0.56139 2.08489 1.86185 1.89791 73 a - - -
473 1.38629 1.38629 1.38629 1.38629
474 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
475 74 0.56139 2.08489 1.86185 1.89791 74 a - - -
476 1.38629 1.38629 1.38629 1.38629
477 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
478 75 0.56139 2.08489 1.86185 1.89791 75 a - - -
479 1.38629 1.38629 1.38629 1.38629
480 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
481 76 1.91091 1.78233 1.95844 0.61114 76 t - - -
482 1.38629 1.38629 1.38629 1.38629
483 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
484 77 1.98342 0.60779 2.04641 1.66785 77 c - - -
485 1.38629 1.38629 1.38629 1.38629
486 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
487 78 0.56139 2.08489 1.86185 1.89791 78 a - - -
488 1.38629 1.38629 1.38629 1.38629
489 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
490 79 1.97267 2.25870 0.46443 2.05625 79 g - - -
491 1.38629 1.38629 1.38629 1.38629
492 0.03279 3.43399 * 1.46634 0.26236 0.00000 *
493 //
494 HMMER3/f [3.2.1 | June 2018]
495 NAME long.2.aln
496 LENG 70
497 MAXL 188
498 ALPH DNA
499 RF no
500 MM no
501 CONS yes
502 CS no
503 MAP yes
504 DATE Tue May 28 13:12:02 2019
505 NSEQ 3
506 EFFN 3.000000
507 CKSUM 2903879936
508 STATS LOCAL MSV -9.1232 0.72663
509 STATS LOCAL VITERBI -9.3215 0.72663
510 STATS LOCAL FORWARD -3.0734 0.72663
511 HMM A C G T
512 m->m m->i m->d i->m i->i d->m d->d
513 COMPO 1.13844 1.68610 1.59008 1.23605
514 1.38629 1.38629 1.38629 1.38629
515 0.22977 3.95124 1.68173 1.46634 0.26236 0.00000 *
516 1 0.96677 1.92013 1.91053 1.12362 1 a - - -
517 1.38629 1.38629 1.38629 1.38629
518 0.04726 3.76874 3.76874 1.46634 0.26236 1.55497 0.23724
519 2 2.36920 2.17182 2.47016 0.34545 2 t - - -
520 1.83446 0.84257 1.83446 1.38629
521 0.42541 1.12882 3.76874 2.03997 0.13930 0.54886 0.86182
522 3 1.16410 2.43420 0.71774 2.18679 11 g - - -
523 1.38629 1.38629 1.38629 1.38629
524 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
525 4 2.00446 2.13960 0.87914 1.10134 12 g - - -
526 1.38629 1.38629 1.38629 1.38629
527 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
528 5 2.23985 1.03062 2.36449 0.81477 13 t - - -
529 1.38629 1.38629 1.38629 1.38629
530 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
531 6 0.94121 2.04768 2.06592 1.03815 14 a - - -
532 1.38629 1.38629 1.38629 1.38629
533 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
534 7 0.95731 2.35593 0.91678 2.10812 15 g - - -
535 1.38629 1.38629 1.38629 1.38629
536 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
537 8 0.94121 2.04768 2.06592 1.03815 16 a - - -
538 1.38629 1.38629 1.38629 1.38629
539 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
540 9 2.71655 2.45957 2.83486 0.23610 17 t - - -
541 1.38629 1.38629 1.38629 1.38629
542 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
543 10 2.06732 1.16410 0.86888 1.95298 18 g - - -
544 1.38629 1.38629 1.38629 1.38629
545 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
546 11 2.71655 2.45957 2.83486 0.23610 19 t - - -
547 1.38629 1.38629 1.38629 1.38629
548 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
549 12 1.16410 2.43420 0.71774 2.18679 20 g - - -
550 1.38629 1.38629 1.38629 1.38629
551 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
552 13 0.92413 1.09732 2.14928 1.87869 21 a - - -
553 1.38629 1.38629 1.38629 1.38629
554 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
555 14 2.89989 0.21012 3.04772 2.44162 22 c - - -
556 1.38629 1.38629 1.38629 1.38629
557 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
558 15 0.16029 3.12721 2.94402 2.96400 23 a - - -
559 1.38629 1.38629 1.38629 1.38629
560 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
561 16 2.00446 2.13960 0.87914 1.10134 24 g - - -
562 1.38629 1.38629 1.38629 1.38629
563 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
564 17 0.95731 2.35593 0.91678 2.10812 25 g - - -
565 1.38629 1.38629 1.38629 1.38629
566 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
567 18 0.94121 2.04768 2.06592 1.03815 26 a - - -
568 1.38629 1.38629 1.38629 1.38629
569 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
570 19 0.92413 1.09732 2.14928 1.87869 27 a - - -
571 1.38629 1.38629 1.38629 1.38629
572 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
573 20 0.16029 3.12721 2.94402 2.96400 28 a - - -
574 1.38629 1.38629 1.38629 1.38629
575 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
576 21 2.71655 2.45957 2.83486 0.23610 29 t - - -
577 1.38629 1.38629 1.38629 1.38629
578 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
579 22 2.71655 2.45957 2.83486 0.23610 30 t - - -
580 1.38629 1.38629 1.38629 1.38629
581 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
582 23 2.71655 2.45957 2.83486 0.23610 31 t - - -
583 1.38629 1.38629 1.38629 1.38629
584 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
585 24 2.71655 2.45957 2.83486 0.23610 32 t - - -
586 1.38629 1.38629 1.38629 1.38629
587 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
588 25 0.94121 2.04768 2.06592 1.03815 33 a - - -
589 1.38629 1.38629 1.38629 1.38629
590 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
591 26 0.92413 1.09732 2.14928 1.87869 34 a - - -
592 1.38629 1.38629 1.38629 1.38629
593 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
594 27 2.89989 0.21012 3.04772 2.44162 35 c - - -
595 1.38629 1.38629 1.38629 1.38629
596 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
597 28 0.16029 3.12721 2.94402 2.96400 36 a - - -
598 1.38629 1.38629 1.38629 1.38629
599 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
600 29 2.23985 1.03062 2.36449 0.81477 37 t - - -
601 1.38629 1.38629 1.38629 1.38629
602 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
603 30 1.16410 2.43420 0.71774 2.18679 38 g - - -
604 1.38629 1.38629 1.38629 1.38629
605 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
606 31 2.71655 2.45957 2.83486 0.23610 39 t - - -
607 1.38629 1.38629 1.38629 1.38629
608 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
609 32 2.72479 3.30093 0.15917 3.10680 40 g - - -
610 1.38629 1.38629 1.38629 1.38629
611 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
612 33 2.00446 2.13960 0.87914 1.10134 41 g - - -
613 1.38629 1.38629 1.38629 1.38629
614 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
615 34 0.94121 2.04768 2.06592 1.03815 42 a - - -
616 1.38629 1.38629 1.38629 1.38629
617 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
618 35 0.16029 3.12721 2.94402 2.96400 43 a - - -
619 1.38629 1.38629 1.38629 1.38629
620 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
621 36 0.16029 3.12721 2.94402 2.96400 44 a - - -
622 1.38629 1.38629 1.38629 1.38629
623 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
624 37 0.16029 3.12721 2.94402 2.96400 45 a - - -
625 1.38629 1.38629 1.38629 1.38629
626 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
627 38 0.16029 3.12721 2.94402 2.96400 46 a - - -
628 1.38629 1.38629 1.38629 1.38629
629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
630 39 2.71655 2.45957 2.83486 0.23610 47 t - - -
631 1.38629 1.38629 1.38629 1.38629
632 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
633 40 2.00446 2.13960 0.87914 1.10134 48 g - - -
634 1.38629 1.38629 1.38629 1.38629
635 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
636 41 0.94121 2.04768 2.06592 1.03815 49 a - - -
637 1.38629 1.38629 1.38629 1.38629
638 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
639 42 2.26706 0.84214 2.39363 0.98270 50 c - - -
640 1.38629 1.38629 1.38629 1.38629
641 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
642 43 0.92413 1.09732 2.14928 1.87869 51 a - - -
643 1.38629 1.38629 1.38629 1.38629
644 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
645 44 2.71655 2.45957 2.83486 0.23610 52 t - - -
646 1.38629 1.38629 1.38629 1.38629
647 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
648 45 2.72479 3.30093 0.15917 3.10680 53 g - - -
649 1.38629 1.38629 1.38629 1.38629
650 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
651 46 2.00446 2.13960 0.87914 1.10134 54 g - - -
652 1.38629 1.38629 1.38629 1.38629
653 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
654 47 2.23985 1.03062 2.36449 0.81477 55 t - - -
655 1.38629 1.38629 1.38629 1.38629
656 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
657 48 0.16029 3.12721 2.94402 2.96400 56 a - - -
658 1.38629 1.38629 1.38629 1.38629
659 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
660 49 2.06732 1.16410 0.86888 1.95298 57 g - - -
661 1.38629 1.38629 1.38629 1.38629
662 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
663 50 0.16029 3.12721 2.94402 2.96400 58 a - - -
664 2.06732 2.06732 2.06732 0.47735
665 0.34065 1.31133 3.95124 1.13545 0.38754 1.09861 0.40547
666 51 0.16029 3.12721 2.94402 2.96400 62 a - - -
667 1.38629 1.38629 1.38629 1.38629
668 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
669 52 2.89989 0.21012 3.04772 2.44162 63 c - - -
670 1.38629 1.38629 1.38629 1.38629
671 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
672 53 0.92413 1.09732 2.14928 1.87869 64 a - - -
673 1.38629 1.38629 1.38629 1.38629
674 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
675 54 1.16410 2.43420 0.71774 2.18679 65 g - - -
676 1.38629 1.38629 1.38629 1.38629
677 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
678 55 0.16029 3.12721 2.94402 2.96400 66 a - - -
679 1.38629 1.38629 1.38629 1.38629
680 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
681 56 2.71655 2.45957 2.83486 0.23610 67 t - - -
682 1.38629 1.38629 1.38629 1.38629
683 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
684 57 1.16410 2.43420 0.71774 2.18679 68 g - - -
685 1.38629 1.38629 1.38629 1.38629
686 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
687 58 2.89989 0.21012 3.04772 2.44162 69 c - - -
688 1.38629 1.38629 1.38629 1.38629
689 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
690 59 0.94121 2.04768 2.06592 1.03815 70 a - - -
691 1.38629 1.38629 1.38629 1.38629
692 0.34065 3.95124 1.31133 1.46634 0.26236 1.09861 0.40547
693 60 2.19131 2.02277 2.27840 0.42542 71 t - - -
694 1.38629 1.38629 1.38629 1.38629
695 0.05266 3.66325 3.66325 1.46634 0.26236 1.72320 0.19662
696 61 2.27199 2.66585 0.29804 2.46413 72 g - - -
697 1.38629 1.38629 1.38629 1.38629
698 0.05266 3.66325 3.66325 1.46634 0.26236 1.72320 0.19662
699 62 0.34983 2.44790 2.25491 2.26497 73 a - - -
700 1.38629 1.38629 1.38629 1.38629
701 0.05266 3.66325 3.66325 1.46634 0.26236 1.72320 0.19662
702 63 2.27199 2.66585 0.29804 2.46413 74 g - - -
703 1.38629 1.38629 1.38629 1.38629
704 0.05266 3.66325 3.66325 1.46634 0.26236 1.72320 0.19662
705 64 2.27199 2.66585 0.29804 2.46413 75 g - - -
706 1.38629 1.38629 1.38629 1.38629
707 0.05266 3.66325 3.66325 1.46634 0.26236 1.72320 0.19662
708 65 0.34983 2.44790 2.25491 2.26497 76 a - - -
709 1.38629 1.38629 1.38629 1.38629
710 0.05266 3.66325 3.66325 1.46634 0.26236 1.72320 0.19662
711 66 2.19131 2.02277 2.27840 0.42542 77 t - - -
712 1.38629 1.38629 1.38629 1.38629
713 0.05266 3.66325 3.66325 1.46634 0.26236 1.72320 0.19662
714 67 0.34983 2.44790 2.25491 2.26497 78 a - - -
715 1.38629 1.38629 1.38629 1.38629
716 0.05266 3.66325 3.66325 1.46634 0.26236 1.72320 0.19662
717 68 2.19131 2.02277 2.27840 0.42542 79 t - - -
718 1.38629 1.38629 1.38629 1.38629
719 0.05266 3.66325 3.66325 1.46634 0.26236 1.72320 0.19662
720 69 0.34983 2.44790 2.25491 2.26497 80 a - - -
721 1.38629 1.38629 1.38629 1.38629
722 0.05266 3.66325 3.66325 1.46634 0.26236 1.72320 0.19662
723 70 0.34983 2.44790 2.25491 2.26497 81 a - - -
724 1.74658 1.12199 1.74658 1.12199
725 0.29394 1.36775 * 0.82573 0.57610 0.00000 *
726 //
727 HMMER3/f [3.2.1 | June 2018]
728 NAME long.3.aln
729 LENG 70
730 MAXL 160
731 ALPH DNA
732 RF no
733 MM no
734 CONS yes
735 CS no
736 MAP yes
737 DATE Tue May 28 13:12:03 2019
738 NSEQ 2
739 EFFN 2.000000
740 CKSUM 1714318246
741 STATS LOCAL MSV -8.2025 0.72173
742 STATS LOCAL VITERBI -9.2815 0.72173
743 STATS LOCAL FORWARD -3.3965 0.72173
744 HMM A C G T
745 m->m m->i m->d i->m i->i d->m d->d
746 COMPO 1.34339 1.47570 1.65715 1.14025
747 1.38629 1.38629 1.38629 1.38629
748 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
749 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
750 1.38629 1.38629 1.38629 1.38629
751 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
752 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
753 1.38629 1.38629 1.38629 1.38629
754 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
755 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
756 1.38629 1.38629 1.38629 1.38629
757 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
758 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
759 1.38629 1.38629 1.38629 1.38629
760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
761 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
762 1.38629 1.38629 1.38629 1.38629
763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
764 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
765 1.38629 1.38629 1.38629 1.38629
766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
767 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
768 1.38629 1.38629 1.38629 1.38629
769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
770 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
771 1.38629 1.38629 1.38629 1.38629
772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
773 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
774 1.38629 1.38629 1.38629 1.38629
775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
776 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
777 1.38629 1.38629 1.38629 1.38629
778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
779 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
780 1.38629 1.38629 1.38629 1.38629
781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
782 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
783 1.38629 1.38629 1.38629 1.38629
784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
785 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
786 1.38629 1.38629 1.38629 1.38629
787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
788 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
789 1.38629 1.38629 1.38629 1.38629
790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
791 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
792 1.38629 1.38629 1.38629 1.38629
793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
794 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
795 1.38629 1.38629 1.38629 1.38629
796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
797 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
798 1.38629 1.38629 1.38629 1.38629
799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
800 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
801 1.38629 1.38629 1.38629 1.38629
802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
803 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
804 1.38629 1.38629 1.38629 1.38629
805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
806 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
807 1.38629 1.38629 1.38629 1.38629
808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
809 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
810 1.38629 1.38629 1.38629 1.38629
811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
812 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
813 1.38629 1.38629 1.38629 1.38629
814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
815 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
816 1.38629 1.38629 1.38629 1.38629
817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
818 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
819 1.38629 1.38629 1.38629 1.38629
820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
821 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
822 1.38629 1.38629 1.38629 1.38629
823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
824 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
825 1.38629 1.38629 1.38629 1.38629
826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
827 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
828 1.38629 1.38629 1.38629 1.38629
829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
830 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
831 1.38629 1.38629 1.38629 1.38629
832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
833 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
834 1.38629 1.38629 1.38629 1.38629
835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
836 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
837 1.38629 1.38629 1.38629 1.38629
838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
839 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
840 1.38629 1.38629 1.38629 1.38629
841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
842 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
843 1.38629 1.38629 1.38629 1.38629
844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
845 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
846 1.38629 1.38629 1.38629 1.38629
847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
848 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
849 1.38629 1.38629 1.38629 1.38629
850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
851 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
852 1.38629 1.38629 1.38629 1.38629
853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
854 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
855 1.38629 1.38629 1.38629 1.38629
856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
857 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
858 1.38629 1.38629 1.38629 1.38629
859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
860 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
861 1.38629 1.38629 1.38629 1.38629
862 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
863 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
864 1.38629 1.38629 1.38629 1.38629
865 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
866 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
867 1.38629 1.38629 1.38629 1.38629
868 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
869 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
870 1.38629 1.38629 1.38629 1.38629
871 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
872 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
873 1.38629 1.38629 1.38629 1.38629
874 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
875 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
876 1.38629 1.38629 1.38629 1.38629
877 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
878 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
879 1.38629 1.38629 1.38629 1.38629
880 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
881 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
882 1.38629 1.38629 1.38629 1.38629
883 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
884 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
885 1.38629 1.38629 1.38629 1.38629
886 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
887 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
888 1.38629 1.38629 1.38629 1.38629
889 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
890 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
891 1.38629 1.38629 1.38629 1.38629
892 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
893 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
894 1.38629 1.38629 1.38629 1.38629
895 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
896 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
897 1.38629 1.38629 1.38629 1.38629
898 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
899 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
900 1.38629 1.38629 1.38629 1.38629
901 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
902 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
903 1.38629 1.38629 1.38629 1.38629
904 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
905 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
906 1.38629 1.38629 1.38629 1.38629
907 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
908 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
909 1.38629 1.38629 1.38629 1.38629
910 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
911 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
912 1.38629 1.38629 1.38629 1.38629
913 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
914 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
915 1.38629 1.38629 1.38629 1.38629
916 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
917 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
918 1.38629 1.38629 1.38629 1.38629
919 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
920 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
921 1.38629 1.38629 1.38629 1.38629
922 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
923 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
924 1.38629 1.38629 1.38629 1.38629
925 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
926 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
927 1.38629 1.38629 1.38629 1.38629
928 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
929 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
930 1.38629 1.38629 1.38629 1.38629
931 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
932 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
933 1.38629 1.38629 1.38629 1.38629
934 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
935 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
936 1.38629 1.38629 1.38629 1.38629
937 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
938 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
939 1.38629 1.38629 1.38629 1.38629
940 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
941 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
942 1.38629 1.38629 1.38629 1.38629
943 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
944 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
945 1.38629 1.38629 1.38629 1.38629
946 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
947 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
948 1.38629 1.38629 1.38629 1.38629
949 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
950 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
951 1.38629 1.38629 1.38629 1.38629
952 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
953 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
954 1.38629 1.38629 1.38629 1.38629
955 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
956 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
957 1.38629 1.38629 1.38629 1.38629
958 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
959 //
960 HMMER3/f [3.2.1 | June 2018]
961 NAME long.4.aln
962 LENG 75
963 MAXL 167
964 ALPH DNA
965 RF no
966 MM no
967 CONS yes
968 CS no
969 MAP yes
970 DATE Tue May 28 13:12:03 2019
971 NSEQ 2
972 EFFN 2.000000
973 CKSUM 4254883388
974 STATS LOCAL MSV -7.9031 0.72215
975 STATS LOCAL VITERBI -9.4337 0.72215
976 STATS LOCAL FORWARD -3.6540 0.72215
977 HMM A C G T
978 m->m m->i m->d i->m i->i d->m d->d
979 COMPO 1.20862 1.43722 1.53118 1.39624
980 1.38629 1.38629 1.38629 1.38629
981 0.33647 3.73767 1.33977 1.46634 0.26236 0.00000 *
982 1 1.98342 0.60779 2.04641 1.66785 1 c - - -
983 1.38629 1.38629 1.38629 1.38629
984 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
985 2 1.98342 0.60779 2.04641 1.66785 2 c - - -
986 1.38629 1.38629 1.38629 1.38629
987 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
988 3 0.56139 2.08489 1.86185 1.89791 3 a - - -
989 1.38629 1.38629 1.38629 1.38629
990 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
991 4 0.56139 2.08489 1.86185 1.89791 4 a - - -
992 1.38629 1.38629 1.38629 1.38629
993 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
994 5 1.97267 2.25870 0.46443 2.05625 5 g - - -
995 1.38629 1.38629 1.38629 1.38629
996 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
997 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
998 1.38629 1.38629 1.38629 1.38629
999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1000 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
1001 1.38629 1.38629 1.38629 1.38629
1002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1003 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
1004 1.38629 1.38629 1.38629 1.38629
1005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1006 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
1007 1.38629 1.38629 1.38629 1.38629
1008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1009 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
1010 1.38629 1.38629 1.38629 1.38629
1011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1012 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
1013 1.38629 1.38629 1.38629 1.38629
1014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1015 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
1016 1.38629 1.38629 1.38629 1.38629
1017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1018 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
1019 1.38629 1.38629 1.38629 1.38629
1020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1021 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
1022 1.38629 1.38629 1.38629 1.38629
1023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1024 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
1025 1.38629 1.38629 1.38629 1.38629
1026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1027 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
1028 1.38629 1.38629 1.38629 1.38629
1029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1030 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
1031 1.38629 1.38629 1.38629 1.38629
1032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1033 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
1034 1.38629 1.38629 1.38629 1.38629
1035 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1036 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
1037 1.38629 1.38629 1.38629 1.38629
1038 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1039 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
1040 1.38629 1.38629 1.38629 1.38629
1041 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1042 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
1043 1.38629 1.38629 1.38629 1.38629
1044 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1045 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
1046 1.38629 1.38629 1.38629 1.38629
1047 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1048 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
1049 1.38629 1.38629 1.38629 1.38629
1050 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1051 24 1.08498 1.08670 1.94700 1.70340 24 a - - -
1052 1.38629 1.38629 1.38629 1.38629
1053 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1054 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
1055 1.38629 1.38629 1.38629 1.38629
1056 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1057 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
1058 1.38629 1.38629 1.38629 1.38629
1059 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1060 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
1061 1.38629 1.38629 1.38629 1.38629
1062 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1063 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
1064 1.38629 1.38629 1.38629 1.38629
1065 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1066 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
1067 1.38629 1.38629 1.38629 1.38629
1068 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1069 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
1070 1.38629 1.38629 1.38629 1.38629
1071 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1072 31 1.09289 1.89038 1.88803 1.01509 31 t - - -
1073 1.38629 1.38629 1.38629 1.38629
1074 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1075 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
1076 1.38629 1.38629 1.38629 1.38629
1077 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1078 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
1079 1.38629 1.38629 1.38629 1.38629
1080 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1081 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
1082 1.38629 1.38629 1.38629 1.38629
1083 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1084 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
1085 1.38629 1.38629 1.38629 1.38629
1086 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1087 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
1088 1.38629 1.38629 1.38629 1.38629
1089 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1090 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
1091 1.38629 1.38629 1.38629 1.38629
1092 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1093 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
1094 1.38629 1.38629 1.38629 1.38629
1095 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1096 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
1097 1.38629 1.38629 1.38629 1.38629
1098 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1099 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
1100 1.38629 1.38629 1.38629 1.38629
1101 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1102 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
1103 1.38629 1.38629 1.38629 1.38629
1104 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1105 42 1.88401 1.14290 1.03416 1.75097 42 g - - -
1106 1.38629 1.38629 1.38629 1.38629
1107 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1108 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
1109 1.38629 1.38629 1.38629 1.38629
1110 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1111 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
1112 1.38629 1.38629 1.38629 1.38629
1113 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1114 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
1115 1.38629 1.38629 1.38629 1.38629
1116 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1117 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
1118 1.38629 1.38629 1.38629 1.38629
1119 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1120 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
1121 1.38629 1.38629 1.38629 1.38629
1122 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1123 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
1124 1.38629 1.38629 1.38629 1.38629
1125 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1126 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
1127 1.38629 1.38629 1.38629 1.38629
1128 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1129 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
1130 1.38629 1.38629 1.38629 1.38629
1131 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1132 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
1133 1.38629 1.38629 1.38629 1.38629
1134 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1135 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
1136 1.38629 1.38629 1.38629 1.38629
1137 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1138 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
1139 1.38629 1.38629 1.38629 1.38629
1140 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1141 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
1142 1.38629 1.38629 1.38629 1.38629
1143 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1144 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
1145 1.38629 1.38629 1.38629 1.38629
1146 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1147 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
1148 1.38629 1.38629 1.38629 1.38629
1149 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1150 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
1151 1.38629 1.38629 1.38629 1.38629
1152 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1153 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
1154 1.38629 1.38629 1.38629 1.38629
1155 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1156 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
1157 1.38629 1.38629 1.38629 1.38629
1158 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1159 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
1160 1.38629 1.38629 1.38629 1.38629
1161 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1162 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
1163 1.38629 1.38629 1.38629 1.38629
1164 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1165 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
1166 1.38629 1.38629 1.38629 1.38629
1167 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1168 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
1169 1.38629 1.38629 1.38629 1.38629
1170 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1171 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
1172 1.38629 1.38629 1.38629 1.38629
1173 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1174 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
1175 1.38629 1.38629 1.38629 1.38629
1176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1177 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
1178 1.38629 1.38629 1.38629 1.38629
1179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1180 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
1181 1.38629 1.38629 1.38629 1.38629
1182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1183 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
1184 1.38629 1.38629 1.38629 1.38629
1185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1186 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
1187 1.38629 1.38629 1.38629 1.38629
1188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1189 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
1190 1.38629 1.38629 1.38629 1.38629
1191 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
1192 71 0.56139 2.08489 1.86185 1.89791 71 a - - -
1193 1.38629 1.38629 1.38629 1.38629
1194 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
1195 72 1.98342 0.60779 2.04641 1.66785 72 c - - -
1196 1.38629 1.38629 1.38629 1.38629
1197 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
1198 73 0.56139 2.08489 1.86185 1.89791 73 a - - -
1199 1.38629 1.38629 1.38629 1.38629
1200 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
1201 74 1.97267 2.25870 0.46443 2.05625 74 g - - -
1202 1.38629 1.38629 1.38629 1.38629
1203 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
1204 75 1.98342 0.60779 2.04641 1.66785 75 c - - -
1205 1.38629 1.38629 1.38629 1.38629
1206 0.03279 3.43399 * 1.46634 0.26236 0.00000 *
1207 //
1208 HMMER3/f [3.2.1 | June 2018]
1209 NAME long.5.aln
1210 LENG 70
1211 MAXL 160
1212 ALPH DNA
1213 RF no
1214 MM no
1215 CONS yes
1216 CS no
1217 MAP yes
1218 DATE Tue May 28 13:12:02 2019
1219 NSEQ 2
1220 EFFN 2.000000
1221 CKSUM 1411486405
1222 STATS LOCAL MSV -8.2242 0.72116
1223 STATS LOCAL VITERBI -9.3853 0.72116
1224 STATS LOCAL FORWARD -3.9236 0.72116
1225 HMM A C G T
1226 m->m m->i m->d i->m i->i d->m d->d
1227 COMPO 1.34233 1.63901 1.44518 1.17477
1228 1.38629 1.38629 1.38629 1.38629
1229 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
1230 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
1231 1.38629 1.38629 1.38629 1.38629
1232 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1233 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
1234 1.38629 1.38629 1.38629 1.38629
1235 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1236 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
1237 1.38629 1.38629 1.38629 1.38629
1238 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1239 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
1240 1.38629 1.38629 1.38629 1.38629
1241 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1242 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
1243 1.38629 1.38629 1.38629 1.38629
1244 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1245 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
1246 1.38629 1.38629 1.38629 1.38629
1247 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1248 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
1249 1.38629 1.38629 1.38629 1.38629
1250 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1251 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
1252 1.38629 1.38629 1.38629 1.38629
1253 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1254 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
1255 1.38629 1.38629 1.38629 1.38629
1256 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1257 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
1258 1.38629 1.38629 1.38629 1.38629
1259 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1260 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
1261 1.38629 1.38629 1.38629 1.38629
1262 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1263 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
1264 1.38629 1.38629 1.38629 1.38629
1265 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1266 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
1267 1.38629 1.38629 1.38629 1.38629
1268 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1269 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
1270 1.38629 1.38629 1.38629 1.38629
1271 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1272 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
1273 1.38629 1.38629 1.38629 1.38629
1274 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1275 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
1276 1.38629 1.38629 1.38629 1.38629
1277 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1278 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
1279 1.38629 1.38629 1.38629 1.38629
1280 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1281 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
1282 1.38629 1.38629 1.38629 1.38629
1283 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1284 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
1285 1.38629 1.38629 1.38629 1.38629
1286 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1287 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
1288 1.38629 1.38629 1.38629 1.38629
1289 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1290 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
1291 1.38629 1.38629 1.38629 1.38629
1292 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1293 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
1294 1.38629 1.38629 1.38629 1.38629
1295 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1296 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
1297 1.38629 1.38629 1.38629 1.38629
1298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1299 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
1300 1.38629 1.38629 1.38629 1.38629
1301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1302 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
1303 1.38629 1.38629 1.38629 1.38629
1304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1305 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
1306 1.38629 1.38629 1.38629 1.38629
1307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1308 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
1309 1.38629 1.38629 1.38629 1.38629
1310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1311 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
1312 1.38629 1.38629 1.38629 1.38629
1313 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1314 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
1315 1.38629 1.38629 1.38629 1.38629
1316 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1317 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
1318 1.38629 1.38629 1.38629 1.38629
1319 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1320 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
1321 1.38629 1.38629 1.38629 1.38629
1322 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1323 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
1324 1.38629 1.38629 1.38629 1.38629
1325 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1326 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
1327 1.38629 1.38629 1.38629 1.38629
1328 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1329 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
1330 1.38629 1.38629 1.38629 1.38629
1331 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1332 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
1333 1.38629 1.38629 1.38629 1.38629
1334 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1335 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
1336 1.38629 1.38629 1.38629 1.38629
1337 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1338 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
1339 1.38629 1.38629 1.38629 1.38629
1340 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1341 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
1342 1.38629 1.38629 1.38629 1.38629
1343 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1344 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
1345 1.38629 1.38629 1.38629 1.38629
1346 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1347 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
1348 1.38629 1.38629 1.38629 1.38629
1349 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1350 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
1351 1.38629 1.38629 1.38629 1.38629
1352 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1353 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
1354 1.38629 1.38629 1.38629 1.38629
1355 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1356 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
1357 1.38629 1.38629 1.38629 1.38629
1358 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1359 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
1360 1.38629 1.38629 1.38629 1.38629
1361 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1362 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
1363 1.38629 1.38629 1.38629 1.38629
1364 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1365 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
1366 1.38629 1.38629 1.38629 1.38629
1367 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1368 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
1369 1.38629 1.38629 1.38629 1.38629
1370 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1371 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
1372 1.38629 1.38629 1.38629 1.38629
1373 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1374 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
1375 1.38629 1.38629 1.38629 1.38629
1376 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1377 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
1378 1.38629 1.38629 1.38629 1.38629
1379 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1380 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
1381 1.38629 1.38629 1.38629 1.38629
1382 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1383 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
1384 1.38629 1.38629 1.38629 1.38629
1385 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1386 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
1387 1.38629 1.38629 1.38629 1.38629
1388 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1389 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
1390 1.38629 1.38629 1.38629 1.38629
1391 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1392 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
1393 1.38629 1.38629 1.38629 1.38629
1394 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1395 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
1396 1.38629 1.38629 1.38629 1.38629
1397 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1398 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
1399 1.38629 1.38629 1.38629 1.38629
1400 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1401 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
1402 1.38629 1.38629 1.38629 1.38629
1403 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1404 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
1405 1.38629 1.38629 1.38629 1.38629
1406 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1407 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
1408 1.38629 1.38629 1.38629 1.38629
1409 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1410 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
1411 1.38629 1.38629 1.38629 1.38629
1412 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1413 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
1414 1.38629 1.38629 1.38629 1.38629
1415 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1416 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
1417 1.38629 1.38629 1.38629 1.38629
1418 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1419 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
1420 1.38629 1.38629 1.38629 1.38629
1421 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1422 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
1423 1.38629 1.38629 1.38629 1.38629
1424 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1425 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
1426 1.38629 1.38629 1.38629 1.38629
1427 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1428 67 2.38910 2.82844 0.25233 2.62837 67 g - - -
1429 1.38629 1.38629 1.38629 1.38629
1430 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1431 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
1432 1.38629 1.38629 1.38629 1.38629
1433 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1434 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
1435 1.38629 1.38629 1.38629 1.38629
1436 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1437 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
1438 1.38629 1.38629 1.38629 1.38629
1439 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
1440 //
1441 HMMER3/f [3.2.1 | June 2018]
1442 NAME long.6.aln
1443 LENG 70
1444 MAXL 160
1445 ALPH DNA
1446 RF no
1447 MM no
1448 CONS yes
1449 CS no
1450 MAP yes
1451 DATE Tue May 28 13:12:02 2019
1452 NSEQ 2
1453 EFFN 2.000000
1454 CKSUM 2378325802
1455 STATS LOCAL MSV -8.3548 0.72225
1456 STATS LOCAL VITERBI -9.2925 0.72225
1457 STATS LOCAL FORWARD -3.4728 0.72225
1458 HMM A C G T
1459 m->m m->i m->d i->m i->i d->m d->d
1460 COMPO 1.44379 1.53363 1.70267 1.00506
1461 1.38629 1.38629 1.38629 1.38629
1462 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
1463 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
1464 1.38629 1.38629 1.38629 1.38629
1465 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1466 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
1467 1.38629 1.38629 1.38629 1.38629
1468 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1469 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
1470 1.38629 1.38629 1.38629 1.38629
1471 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1472 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
1473 1.38629 1.38629 1.38629 1.38629
1474 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1475 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
1476 1.38629 1.38629 1.38629 1.38629
1477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1478 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
1479 1.38629 1.38629 1.38629 1.38629
1480 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1481 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
1482 1.38629 1.38629 1.38629 1.38629
1483 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1484 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
1485 1.38629 1.38629 1.38629 1.38629
1486 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1487 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
1488 1.38629 1.38629 1.38629 1.38629
1489 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1490 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
1491 1.38629 1.38629 1.38629 1.38629
1492 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1493 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
1494 1.38629 1.38629 1.38629 1.38629
1495 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1496 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
1497 1.38629 1.38629 1.38629 1.38629
1498 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1499 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
1500 1.38629 1.38629 1.38629 1.38629
1501 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1502 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
1503 1.38629 1.38629 1.38629 1.38629
1504 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1505 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
1506 1.38629 1.38629 1.38629 1.38629
1507 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1508 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
1509 1.38629 1.38629 1.38629 1.38629
1510 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1511 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
1512 1.38629 1.38629 1.38629 1.38629
1513 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1514 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
1515 1.38629 1.38629 1.38629 1.38629
1516 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1517 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
1518 1.38629 1.38629 1.38629 1.38629
1519 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1520 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
1521 1.38629 1.38629 1.38629 1.38629
1522 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1523 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
1524 1.38629 1.38629 1.38629 1.38629
1525 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1526 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
1527 1.38629 1.38629 1.38629 1.38629
1528 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1529 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
1530 1.38629 1.38629 1.38629 1.38629
1531 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1532 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
1533 1.38629 1.38629 1.38629 1.38629
1534 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1535 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
1536 1.38629 1.38629 1.38629 1.38629
1537 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1538 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
1539 1.38629 1.38629 1.38629 1.38629
1540 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1541 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
1542 1.38629 1.38629 1.38629 1.38629
1543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1544 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
1545 1.38629 1.38629 1.38629 1.38629
1546 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1547 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
1548 1.38629 1.38629 1.38629 1.38629
1549 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1550 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
1551 1.38629 1.38629 1.38629 1.38629
1552 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1553 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
1554 1.38629 1.38629 1.38629 1.38629
1555 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1556 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
1557 1.38629 1.38629 1.38629 1.38629
1558 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1559 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
1560 1.38629 1.38629 1.38629 1.38629
1561 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1562 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
1563 1.38629 1.38629 1.38629 1.38629
1564 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1565 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
1566 1.38629 1.38629 1.38629 1.38629
1567 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1568 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
1569 1.38629 1.38629 1.38629 1.38629
1570 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1571 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
1572 1.38629 1.38629 1.38629 1.38629
1573 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1574 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
1575 1.38629 1.38629 1.38629 1.38629
1576 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1577 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
1578 1.38629 1.38629 1.38629 1.38629
1579 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1580 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
1581 1.38629 1.38629 1.38629 1.38629
1582 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1583 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
1584 1.38629 1.38629 1.38629 1.38629
1585 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1586 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
1587 1.38629 1.38629 1.38629 1.38629
1588 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1589 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
1590 1.38629 1.38629 1.38629 1.38629
1591 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1592 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
1593 1.38629 1.38629 1.38629 1.38629
1594 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1595 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
1596 1.38629 1.38629 1.38629 1.38629
1597 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1598 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
1599 1.38629 1.38629 1.38629 1.38629
1600 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1601 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
1602 1.38629 1.38629 1.38629 1.38629
1603 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1604 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
1605 1.38629 1.38629 1.38629 1.38629
1606 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1607 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
1608 1.38629 1.38629 1.38629 1.38629
1609 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1610 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
1611 1.38629 1.38629 1.38629 1.38629
1612 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1613 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
1614 1.38629 1.38629 1.38629 1.38629
1615 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1616 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
1617 1.38629 1.38629 1.38629 1.38629
1618 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1619 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
1620 1.38629 1.38629 1.38629 1.38629
1621 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1622 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
1623 1.38629 1.38629 1.38629 1.38629
1624 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1625 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
1626 1.38629 1.38629 1.38629 1.38629
1627 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1628 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
1629 1.38629 1.38629 1.38629 1.38629
1630 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1631 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
1632 1.38629 1.38629 1.38629 1.38629
1633 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1634 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
1635 1.38629 1.38629 1.38629 1.38629
1636 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1637 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
1638 1.38629 1.38629 1.38629 1.38629
1639 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1640 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
1641 1.38629 1.38629 1.38629 1.38629
1642 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1643 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
1644 1.38629 1.38629 1.38629 1.38629
1645 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1646 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
1647 1.38629 1.38629 1.38629 1.38629
1648 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1649 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
1650 1.38629 1.38629 1.38629 1.38629
1651 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1652 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
1653 1.38629 1.38629 1.38629 1.38629
1654 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1655 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
1656 1.38629 1.38629 1.38629 1.38629
1657 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1658 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
1659 1.38629 1.38629 1.38629 1.38629
1660 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1661 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
1662 1.38629 1.38629 1.38629 1.38629
1663 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1664 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
1665 1.38629 1.38629 1.38629 1.38629
1666 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1667 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
1668 1.38629 1.38629 1.38629 1.38629
1669 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1670 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
1671 1.38629 1.38629 1.38629 1.38629
1672 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
1673 //
1674 HMMER3/f [3.2.1 | June 2018]
1675 NAME long.7.aln
1676 LENG 70
1677 MAXL 160
1678 ALPH DNA
1679 RF no
1680 MM no
1681 CONS yes
1682 CS no
1683 MAP yes
1684 DATE Tue May 28 13:12:02 2019
1685 NSEQ 2
1686 EFFN 2.000000
1687 CKSUM 4123557566
1688 STATS LOCAL MSV -8.0090 0.72082
1689 STATS LOCAL VITERBI -9.1696 0.72082
1690 STATS LOCAL FORWARD -3.9325 0.72082
1691 HMM A C G T
1692 m->m m->i m->d i->m i->i d->m d->d
1693 COMPO 1.37619 1.49875 1.37513 1.30474
1694 1.38629 1.38629 1.38629 1.38629
1695 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
1696 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
1697 1.38629 1.38629 1.38629 1.38629
1698 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1699 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
1700 1.38629 1.38629 1.38629 1.38629
1701 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1702 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
1703 1.38629 1.38629 1.38629 1.38629
1704 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1705 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
1706 1.38629 1.38629 1.38629 1.38629
1707 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1708 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
1709 1.38629 1.38629 1.38629 1.38629
1710 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1711 6 2.46232 0.33808 2.58153 2.07174 6 c - - -
1712 1.38629 1.38629 1.38629 1.38629
1713 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1714 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
1715 1.38629 1.38629 1.38629 1.38629
1716 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1717 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
1718 1.38629 1.38629 1.38629 1.38629
1719 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1720 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
1721 1.38629 1.38629 1.38629 1.38629
1722 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1723 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
1724 1.38629 1.38629 1.38629 1.38629
1725 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1726 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
1727 1.38629 1.38629 1.38629 1.38629
1728 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1729 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
1730 1.38629 1.38629 1.38629 1.38629
1731 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1732 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
1733 1.38629 1.38629 1.38629 1.38629
1734 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1735 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
1736 1.38629 1.38629 1.38629 1.38629
1737 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1738 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
1739 1.38629 1.38629 1.38629 1.38629
1740 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1741 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
1742 1.38629 1.38629 1.38629 1.38629
1743 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1744 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
1745 1.38629 1.38629 1.38629 1.38629
1746 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1747 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
1748 1.38629 1.38629 1.38629 1.38629
1749 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1750 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
1751 1.38629 1.38629 1.38629 1.38629
1752 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1753 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
1754 1.38629 1.38629 1.38629 1.38629
1755 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1756 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
1757 1.38629 1.38629 1.38629 1.38629
1758 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1759 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
1760 1.38629 1.38629 1.38629 1.38629
1761 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1762 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
1763 1.38629 1.38629 1.38629 1.38629
1764 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1765 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
1766 1.38629 1.38629 1.38629 1.38629
1767 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1768 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
1769 1.38629 1.38629 1.38629 1.38629
1770 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1771 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
1772 1.38629 1.38629 1.38629 1.38629
1773 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1774 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
1775 1.38629 1.38629 1.38629 1.38629
1776 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1777 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
1778 1.38629 1.38629 1.38629 1.38629
1779 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1780 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
1781 1.38629 1.38629 1.38629 1.38629
1782 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1783 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
1784 1.38629 1.38629 1.38629 1.38629
1785 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1786 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
1787 1.38629 1.38629 1.38629 1.38629
1788 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1789 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
1790 1.38629 1.38629 1.38629 1.38629
1791 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1792 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
1793 1.38629 1.38629 1.38629 1.38629
1794 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1795 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
1796 1.38629 1.38629 1.38629 1.38629
1797 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1798 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
1799 1.38629 1.38629 1.38629 1.38629
1800 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1801 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
1802 1.38629 1.38629 1.38629 1.38629
1803 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1804 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
1805 1.38629 1.38629 1.38629 1.38629
1806 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1807 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
1808 1.38629 1.38629 1.38629 1.38629
1809 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1810 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
1811 1.38629 1.38629 1.38629 1.38629
1812 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1813 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
1814 1.38629 1.38629 1.38629 1.38629
1815 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1816 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
1817 1.38629 1.38629 1.38629 1.38629
1818 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1819 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
1820 1.38629 1.38629 1.38629 1.38629
1821 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1822 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
1823 1.38629 1.38629 1.38629 1.38629
1824 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1825 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
1826 1.38629 1.38629 1.38629 1.38629
1827 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1828 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
1829 1.38629 1.38629 1.38629 1.38629
1830 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1831 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
1832 1.38629 1.38629 1.38629 1.38629
1833 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1834 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
1835 1.38629 1.38629 1.38629 1.38629
1836 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1837 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
1838 1.38629 1.38629 1.38629 1.38629
1839 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1840 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
1841 1.38629 1.38629 1.38629 1.38629
1842 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1843 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
1844 1.38629 1.38629 1.38629 1.38629
1845 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1846 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
1847 1.38629 1.38629 1.38629 1.38629
1848 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1849 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
1850 1.38629 1.38629 1.38629 1.38629
1851 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1852 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
1853 1.38629 1.38629 1.38629 1.38629
1854 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1855 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
1856 1.38629 1.38629 1.38629 1.38629
1857 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1858 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
1859 1.38629 1.38629 1.38629 1.38629
1860 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1861 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
1862 1.38629 1.38629 1.38629 1.38629
1863 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1864 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
1865 1.38629 1.38629 1.38629 1.38629
1866 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1867 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
1868 1.38629 1.38629 1.38629 1.38629
1869 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1870 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
1871 1.38629 1.38629 1.38629 1.38629
1872 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1873 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
1874 1.38629 1.38629 1.38629 1.38629
1875 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1876 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
1877 1.38629 1.38629 1.38629 1.38629
1878 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1879 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
1880 1.38629 1.38629 1.38629 1.38629
1881 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1882 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
1883 1.38629 1.38629 1.38629 1.38629
1884 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1885 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
1886 1.38629 1.38629 1.38629 1.38629
1887 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1888 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
1889 1.38629 1.38629 1.38629 1.38629
1890 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1891 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
1892 1.38629 1.38629 1.38629 1.38629
1893 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1894 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
1895 1.38629 1.38629 1.38629 1.38629
1896 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1897 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
1898 1.38629 1.38629 1.38629 1.38629
1899 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1900 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
1901 1.38629 1.38629 1.38629 1.38629
1902 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1903 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
1904 1.38629 1.38629 1.38629 1.38629
1905 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
1906 //
1907 HMMER3/f [3.2.1 | June 2018]
1908 NAME long.8.aln
1909 LENG 72
1910 MAXL 163
1911 ALPH DNA
1912 RF no
1913 MM no
1914 CONS yes
1915 CS no
1916 MAP yes
1917 DATE Tue May 28 13:12:03 2019
1918 NSEQ 2
1919 EFFN 2.000000
1920 CKSUM 3543576690
1921 STATS LOCAL MSV -9.0934 0.74635
1922 STATS LOCAL VITERBI -10.7285 0.74635
1923 STATS LOCAL FORWARD -2.0983 0.74635
1924 HMM A C G T
1925 m->m m->i m->d i->m i->i d->m d->d
1926 COMPO 1.24351 1.59287 1.56791 1.20462
1927 1.38629 1.38629 1.38629 1.38629
1928 0.33647 3.73767 1.33977 1.46634 0.26236 0.00000 *
1929 1 0.56139 2.08489 1.86185 1.89791 1 a - - -
1930 1.38629 1.38629 1.38629 1.38629
1931 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
1932 2 1.98342 0.60779 2.04641 1.66785 2 c - - -
1933 1.38629 1.38629 1.38629 1.38629
1934 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
1935 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
1936 1.38629 1.38629 1.38629 1.38629
1937 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1938 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
1939 1.38629 1.38629 1.38629 1.38629
1940 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1941 5 2.01896 1.01168 2.12953 0.95527 5 t - - -
1942 1.38629 1.38629 1.38629 1.38629
1943 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1944 6 1.12273 2.17004 0.88086 1.92408 6 g - - -
1945 1.38629 1.38629 1.38629 1.38629
1946 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1947 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
1948 1.38629 1.38629 1.38629 1.38629
1949 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1950 8 1.09289 1.89038 1.88803 1.01509 8 t - - -
1951 1.38629 1.38629 1.38629 1.38629
1952 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1953 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
1954 1.38629 1.38629 1.38629 1.38629
1955 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1956 10 2.01896 1.01168 2.12953 0.95527 10 t - - -
1957 1.38629 1.38629 1.38629 1.38629
1958 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1959 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
1960 1.38629 1.38629 1.38629 1.38629
1961 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1962 12 1.84050 1.95342 1.03654 1.06480 12 g - - -
1963 1.38629 1.38629 1.38629 1.38629
1964 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1965 13 1.84050 1.95342 1.03654 1.06480 13 g - - -
1966 1.38629 1.38629 1.38629 1.38629
1967 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1968 14 1.08498 1.08670 1.94700 1.70340 14 a - - -
1969 1.38629 1.38629 1.38629 1.38629
1970 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1971 15 1.88401 1.14290 1.03416 1.75097 15 g - - -
1972 1.38629 1.38629 1.38629 1.38629
1973 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1974 16 1.84050 1.95342 1.03654 1.06480 16 g - - -
1975 1.38629 1.38629 1.38629 1.38629
1976 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1977 17 1.12273 2.17004 0.88086 1.92408 17 g - - -
1978 1.38629 1.38629 1.38629 1.38629
1979 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1980 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
1981 1.38629 1.38629 1.38629 1.38629
1982 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1983 19 1.09289 1.89038 1.88803 1.01509 19 t - - -
1984 1.38629 1.38629 1.38629 1.38629
1985 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1986 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
1987 1.38629 1.38629 1.38629 1.38629
1988 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1989 21 1.88401 1.14290 1.03416 1.75097 21 g - - -
1990 1.38629 1.38629 1.38629 1.38629
1991 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1992 22 1.08498 1.08670 1.94700 1.70340 22 a - - -
1993 1.38629 1.38629 1.38629 1.38629
1994 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1995 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
1996 1.38629 1.38629 1.38629 1.38629
1997 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1998 24 1.88401 1.14290 1.03416 1.75097 24 g - - -
1999 1.38629 1.38629 1.38629 1.38629
2000 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2001 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
2002 1.38629 1.38629 1.38629 1.38629
2003 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2004 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
2005 1.38629 1.38629 1.38629 1.38629
2006 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2007 27 1.88401 1.14290 1.03416 1.75097 27 g - - -
2008 1.38629 1.38629 1.38629 1.38629
2009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2010 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
2011 1.38629 1.38629 1.38629 1.38629
2012 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2013 29 1.12273 2.17004 0.88086 1.92408 29 g - - -
2014 1.38629 1.38629 1.38629 1.38629
2015 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2016 30 1.12273 2.17004 0.88086 1.92408 30 g - - -
2017 1.38629 1.38629 1.38629 1.38629
2018 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2019 31 1.08498 1.08670 1.94700 1.70340 31 a - - -
2020 1.38629 1.38629 1.38629 1.38629
2021 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2022 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
2023 1.38629 1.38629 1.38629 1.38629
2024 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2025 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
2026 1.38629 1.38629 1.38629 1.38629
2027 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2028 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
2029 1.38629 1.38629 1.38629 1.38629
2030 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2031 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
2032 1.38629 1.38629 1.38629 1.38629
2033 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2034 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
2035 1.38629 1.38629 1.38629 1.38629
2036 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2037 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
2038 1.38629 1.38629 1.38629 1.38629
2039 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2040 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
2041 1.38629 1.38629 1.38629 1.38629
2042 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2043 39 1.84050 1.95342 1.03654 1.06480 39 g - - -
2044 1.38629 1.38629 1.38629 1.38629
2045 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2046 40 2.01896 1.01168 2.12953 0.95527 40 t - - -
2047 1.38629 1.38629 1.38629 1.38629
2048 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2049 41 2.01896 1.01168 2.12953 0.95527 41 t - - -
2050 1.38629 1.38629 1.38629 1.38629
2051 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2052 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
2053 1.38629 1.38629 1.38629 1.38629
2054 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2055 43 1.88401 1.14290 1.03416 1.75097 43 g - - -
2056 1.38629 1.38629 1.38629 1.38629
2057 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2058 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
2059 1.38629 1.38629 1.38629 1.38629
2060 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2061 45 1.84050 1.95342 1.03654 1.06480 45 g - - -
2062 1.38629 1.38629 1.38629 1.38629
2063 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2064 46 1.88401 1.14290 1.03416 1.75097 46 g - - -
2065 1.38629 1.38629 1.38629 1.38629
2066 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2067 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
2068 1.38629 1.38629 1.38629 1.38629
2069 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2070 48 1.84050 1.95342 1.03654 1.06480 48 g - - -
2071 1.38629 1.38629 1.38629 1.38629
2072 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2073 49 1.88401 1.14290 1.03416 1.75097 49 g - - -
2074 1.38629 1.38629 1.38629 1.38629
2075 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2076 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
2077 1.38629 1.38629 1.38629 1.38629
2078 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2079 51 1.09289 1.89038 1.88803 1.01509 51 t - - -
2080 1.38629 1.38629 1.38629 1.38629
2081 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2082 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
2083 1.38629 1.38629 1.38629 1.38629
2084 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2085 53 2.01896 1.01168 2.12953 0.95527 53 t - - -
2086 1.38629 1.38629 1.38629 1.38629
2087 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2088 54 1.08498 1.08670 1.94700 1.70340 54 a - - -
2089 1.38629 1.38629 1.38629 1.38629
2090 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2091 55 1.88401 1.14290 1.03416 1.75097 55 g - - -
2092 1.38629 1.38629 1.38629 1.38629
2093 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2094 56 1.84050 1.95342 1.03654 1.06480 56 g - - -
2095 1.38629 1.38629 1.38629 1.38629
2096 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2097 57 1.08498 1.08670 1.94700 1.70340 57 a - - -
2098 1.38629 1.38629 1.38629 1.38629
2099 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2100 58 1.08498 1.08670 1.94700 1.70340 58 a - - -
2101 1.38629 1.38629 1.38629 1.38629
2102 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2103 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
2104 1.38629 1.38629 1.38629 1.38629
2105 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2106 60 1.12273 2.17004 0.88086 1.92408 60 g - - -
2107 1.38629 1.38629 1.38629 1.38629
2108 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2109 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
2110 1.38629 1.38629 1.38629 1.38629
2111 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2112 62 1.09289 1.89038 1.88803 1.01509 62 t - - -
2113 1.38629 1.38629 1.38629 1.38629
2114 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2115 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
2116 1.38629 1.38629 1.38629 1.38629
2117 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2118 64 2.01896 1.01168 2.12953 0.95527 64 t - - -
2119 1.38629 1.38629 1.38629 1.38629
2120 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2121 65 1.09289 1.89038 1.88803 1.01509 65 t - - -
2122 1.38629 1.38629 1.38629 1.38629
2123 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2124 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
2125 1.38629 1.38629 1.38629 1.38629
2126 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2127 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
2128 1.38629 1.38629 1.38629 1.38629
2129 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2130 68 1.84050 1.95342 1.03654 1.06480 68 g - - -
2131 1.38629 1.38629 1.38629 1.38629
2132 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2133 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
2134 1.38629 1.38629 1.38629 1.38629
2135 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2136 70 1.84050 1.95342 1.03654 1.06480 70 g - - -
2137 1.38629 1.38629 1.38629 1.38629
2138 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
2139 71 1.91091 1.78233 1.95844 0.61114 71 t - - -
2140 1.38629 1.38629 1.38629 1.38629
2141 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2142 72 1.97267 2.25870 0.46443 2.05625 72 g - - -
2143 1.38629 1.38629 1.38629 1.38629
2144 0.03279 3.43399 * 1.46634 0.26236 0.00000 *
2145 //
2146 HMMER3/f [3.2.1 | June 2018]
2147 NAME long.9.aln
2148 LENG 70
2149 MAXL 160
2150 ALPH DNA
2151 RF no
2152 MM no
2153 CONS yes
2154 CS no
2155 MAP yes
2156 DATE Tue May 28 13:12:03 2019
2157 NSEQ 2
2158 EFFN 2.000000
2159 CKSUM 158536290
2160 STATS LOCAL MSV -8.1021 0.72173
2161 STATS LOCAL VITERBI -9.2636 0.72173
2162 STATS LOCAL FORWARD -2.9700 0.72173
2163 HMM A C G T
2164 m->m m->i m->d i->m i->i d->m d->d
2165 COMPO 1.28100 1.37999 1.75596 1.21093
2166 1.38629 1.38629 1.38629 1.38629
2167 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
2168 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
2169 1.38629 1.38629 1.38629 1.38629
2170 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2171 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
2172 1.38629 1.38629 1.38629 1.38629
2173 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2174 3 2.38910 2.82844 0.25233 2.62837 3 g - - -
2175 1.38629 1.38629 1.38629 1.38629
2176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2177 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
2178 1.38629 1.38629 1.38629 1.38629
2179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2180 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
2181 1.38629 1.38629 1.38629 1.38629
2182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2183 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
2184 1.38629 1.38629 1.38629 1.38629
2185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2186 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
2187 1.38629 1.38629 1.38629 1.38629
2188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2189 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
2190 1.38629 1.38629 1.38629 1.38629
2191 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2192 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
2193 1.38629 1.38629 1.38629 1.38629
2194 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2195 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
2196 1.38629 1.38629 1.38629 1.38629
2197 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2198 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
2199 1.38629 1.38629 1.38629 1.38629
2200 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2201 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
2202 1.38629 1.38629 1.38629 1.38629
2203 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2204 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
2205 1.38629 1.38629 1.38629 1.38629
2206 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2207 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
2208 1.38629 1.38629 1.38629 1.38629
2209 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2210 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
2211 1.38629 1.38629 1.38629 1.38629
2212 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2213 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
2214 1.38629 1.38629 1.38629 1.38629
2215 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2216 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
2217 1.38629 1.38629 1.38629 1.38629
2218 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2219 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
2220 1.38629 1.38629 1.38629 1.38629
2221 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2222 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
2223 1.38629 1.38629 1.38629 1.38629
2224 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2225 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
2226 1.38629 1.38629 1.38629 1.38629
2227 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2228 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
2229 1.38629 1.38629 1.38629 1.38629
2230 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2231 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
2232 1.38629 1.38629 1.38629 1.38629
2233 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2234 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
2235 1.38629 1.38629 1.38629 1.38629
2236 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2237 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
2238 1.38629 1.38629 1.38629 1.38629
2239 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2240 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
2241 1.38629 1.38629 1.38629 1.38629
2242 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2243 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
2244 1.38629 1.38629 1.38629 1.38629
2245 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2246 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
2247 1.38629 1.38629 1.38629 1.38629
2248 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2249 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
2250 1.38629 1.38629 1.38629 1.38629
2251 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2252 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
2253 1.38629 1.38629 1.38629 1.38629
2254 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2255 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
2256 1.38629 1.38629 1.38629 1.38629
2257 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2258 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
2259 1.38629 1.38629 1.38629 1.38629
2260 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2261 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
2262 1.38629 1.38629 1.38629 1.38629
2263 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2264 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
2265 1.38629 1.38629 1.38629 1.38629
2266 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2267 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
2268 1.38629 1.38629 1.38629 1.38629
2269 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2270 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
2271 1.38629 1.38629 1.38629 1.38629
2272 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2273 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
2274 1.38629 1.38629 1.38629 1.38629
2275 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2276 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
2277 1.38629 1.38629 1.38629 1.38629
2278 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2279 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
2280 1.38629 1.38629 1.38629 1.38629
2281 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2282 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
2283 1.38629 1.38629 1.38629 1.38629
2284 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2285 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
2286 1.38629 1.38629 1.38629 1.38629
2287 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2288 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
2289 1.38629 1.38629 1.38629 1.38629
2290 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2291 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
2292 1.38629 1.38629 1.38629 1.38629
2293 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2294 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
2295 1.38629 1.38629 1.38629 1.38629
2296 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2297 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
2298 1.38629 1.38629 1.38629 1.38629
2299 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2300 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
2301 1.38629 1.38629 1.38629 1.38629
2302 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2303 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
2304 1.38629 1.38629 1.38629 1.38629
2305 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2306 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
2307 1.38629 1.38629 1.38629 1.38629
2308 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2309 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
2310 1.38629 1.38629 1.38629 1.38629
2311 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2312 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
2313 1.38629 1.38629 1.38629 1.38629
2314 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2315 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
2316 1.38629 1.38629 1.38629 1.38629
2317 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2318 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
2319 1.38629 1.38629 1.38629 1.38629
2320 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2321 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
2322 1.38629 1.38629 1.38629 1.38629
2323 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2324 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
2325 1.38629 1.38629 1.38629 1.38629
2326 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2327 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
2328 1.38629 1.38629 1.38629 1.38629
2329 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2330 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
2331 1.38629 1.38629 1.38629 1.38629
2332 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2333 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
2334 1.38629 1.38629 1.38629 1.38629
2335 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2336 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
2337 1.38629 1.38629 1.38629 1.38629
2338 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2339 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
2340 1.38629 1.38629 1.38629 1.38629
2341 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2342 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
2343 1.38629 1.38629 1.38629 1.38629
2344 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2345 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
2346 1.38629 1.38629 1.38629 1.38629
2347 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2348 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
2349 1.38629 1.38629 1.38629 1.38629
2350 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2351 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
2352 1.38629 1.38629 1.38629 1.38629
2353 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2354 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
2355 1.38629 1.38629 1.38629 1.38629
2356 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2357 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
2358 1.38629 1.38629 1.38629 1.38629
2359 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2360 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
2361 1.38629 1.38629 1.38629 1.38629
2362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2363 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
2364 1.38629 1.38629 1.38629 1.38629
2365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2366 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
2367 1.38629 1.38629 1.38629 1.38629
2368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2369 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
2370 1.38629 1.38629 1.38629 1.38629
2371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2372 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
2373 1.38629 1.38629 1.38629 1.38629
2374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2375 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
2376 1.38629 1.38629 1.38629 1.38629
2377 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
2378 //
2379 HMMER3/f [3.2.1 | June 2018]
2380 NAME long.10.aln
2381 LENG 80
2382 MAXL 174
2383 ALPH DNA
2384 RF no
2385 MM no
2386 CONS yes
2387 CS no
2388 MAP yes
2389 DATE Tue May 28 13:12:03 2019
2390 NSEQ 2
2391 EFFN 2.000000
2392 CKSUM 2350604415
2393 STATS LOCAL MSV -8.1786 0.72142
2394 STATS LOCAL VITERBI -9.7385 0.72142
2395 STATS LOCAL FORWARD -3.7323 0.72142
2396 HMM A C G T
2397 m->m m->i m->d i->m i->i d->m d->d
2398 COMPO 1.19661 1.39017 1.43397 1.55880
2399 1.38629 1.38629 1.38629 1.38629
2400 0.33647 3.73767 1.33977 1.46634 0.26236 0.00000 *
2401 1 1.97267 2.25870 0.46443 2.05625 1 g - - -
2402 1.38629 1.38629 1.38629 1.38629
2403 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2404 2 1.91091 1.78233 1.95844 0.61114 2 t - - -
2405 1.38629 1.38629 1.38629 1.38629
2406 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2407 3 1.91091 1.78233 1.95844 0.61114 3 t - - -
2408 1.38629 1.38629 1.38629 1.38629
2409 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2410 4 1.91091 1.78233 1.95844 0.61114 4 t - - -
2411 1.38629 1.38629 1.38629 1.38629
2412 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2413 5 1.91091 1.78233 1.95844 0.61114 5 t - - -
2414 1.38629 1.38629 1.38629 1.38629
2415 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2416 6 1.98342 0.60779 2.04641 1.66785 6 c - - -
2417 1.38629 1.38629 1.38629 1.38629
2418 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2419 7 0.56139 2.08489 1.86185 1.89791 7 a - - -
2420 1.38629 1.38629 1.38629 1.38629
2421 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2422 8 1.97267 2.25870 0.46443 2.05625 8 g - - -
2423 1.38629 1.38629 1.38629 1.38629
2424 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2425 9 1.98342 0.60779 2.04641 1.66785 9 c - - -
2426 1.38629 1.38629 1.38629 1.38629
2427 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2428 10 0.56139 2.08489 1.86185 1.89791 10 a - - -
2429 1.38629 1.38629 1.38629 1.38629
2430 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
2431 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
2432 1.38629 1.38629 1.38629 1.38629
2433 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2434 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
2435 1.38629 1.38629 1.38629 1.38629
2436 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2437 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
2438 1.38629 1.38629 1.38629 1.38629
2439 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2440 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
2441 1.38629 1.38629 1.38629 1.38629
2442 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2443 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
2444 1.38629 1.38629 1.38629 1.38629
2445 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2446 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
2447 1.38629 1.38629 1.38629 1.38629
2448 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2449 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
2450 1.38629 1.38629 1.38629 1.38629
2451 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2452 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
2453 1.38629 1.38629 1.38629 1.38629
2454 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2455 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
2456 1.38629 1.38629 1.38629 1.38629
2457 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2458 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
2459 1.38629 1.38629 1.38629 1.38629
2460 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2461 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
2462 1.38629 1.38629 1.38629 1.38629
2463 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2464 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
2465 1.38629 1.38629 1.38629 1.38629
2466 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2467 23 2.38910 2.82844 0.25233 2.62837 23 g - - -
2468 1.38629 1.38629 1.38629 1.38629
2469 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2470 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
2471 1.38629 1.38629 1.38629 1.38629
2472 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2473 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
2474 1.38629 1.38629 1.38629 1.38629
2475 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2476 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
2477 1.38629 1.38629 1.38629 1.38629
2478 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2479 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
2480 1.38629 1.38629 1.38629 1.38629
2481 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2482 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
2483 1.38629 1.38629 1.38629 1.38629
2484 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2485 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
2486 1.38629 1.38629 1.38629 1.38629
2487 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2488 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
2489 1.38629 1.38629 1.38629 1.38629
2490 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2491 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
2492 1.38629 1.38629 1.38629 1.38629
2493 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2494 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
2495 1.38629 1.38629 1.38629 1.38629
2496 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2497 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
2498 1.38629 1.38629 1.38629 1.38629
2499 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2500 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
2501 1.38629 1.38629 1.38629 1.38629
2502 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2503 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
2504 1.38629 1.38629 1.38629 1.38629
2505 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2506 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
2507 1.38629 1.38629 1.38629 1.38629
2508 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2509 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
2510 1.38629 1.38629 1.38629 1.38629
2511 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2512 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
2513 1.38629 1.38629 1.38629 1.38629
2514 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2515 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
2516 1.38629 1.38629 1.38629 1.38629
2517 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2518 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
2519 1.38629 1.38629 1.38629 1.38629
2520 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2521 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
2522 1.38629 1.38629 1.38629 1.38629
2523 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2524 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
2525 1.38629 1.38629 1.38629 1.38629
2526 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2527 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
2528 1.38629 1.38629 1.38629 1.38629
2529 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2530 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
2531 1.38629 1.38629 1.38629 1.38629
2532 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2533 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
2534 1.38629 1.38629 1.38629 1.38629
2535 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2536 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
2537 1.38629 1.38629 1.38629 1.38629
2538 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2539 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
2540 1.38629 1.38629 1.38629 1.38629
2541 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2542 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
2543 1.38629 1.38629 1.38629 1.38629
2544 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2545 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
2546 1.38629 1.38629 1.38629 1.38629
2547 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2548 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
2549 1.38629 1.38629 1.38629 1.38629
2550 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2551 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
2552 1.38629 1.38629 1.38629 1.38629
2553 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2554 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
2555 1.38629 1.38629 1.38629 1.38629
2556 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2557 53 1.08498 1.08670 1.94700 1.70340 53 a - - -
2558 1.38629 1.38629 1.38629 1.38629
2559 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2560 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
2561 1.38629 1.38629 1.38629 1.38629
2562 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2563 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
2564 1.38629 1.38629 1.38629 1.38629
2565 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2566 56 1.08498 1.08670 1.94700 1.70340 56 a - - -
2567 1.38629 1.38629 1.38629 1.38629
2568 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2569 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
2570 1.38629 1.38629 1.38629 1.38629
2571 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2572 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
2573 1.38629 1.38629 1.38629 1.38629
2574 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2575 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
2576 1.38629 1.38629 1.38629 1.38629
2577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2578 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
2579 1.38629 1.38629 1.38629 1.38629
2580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2581 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
2582 1.38629 1.38629 1.38629 1.38629
2583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2584 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
2585 1.38629 1.38629 1.38629 1.38629
2586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2587 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
2588 1.38629 1.38629 1.38629 1.38629
2589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2590 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
2591 1.38629 1.38629 1.38629 1.38629
2592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2593 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
2594 1.38629 1.38629 1.38629 1.38629
2595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2596 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
2597 1.38629 1.38629 1.38629 1.38629
2598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2599 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
2600 1.38629 1.38629 1.38629 1.38629
2601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2602 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
2603 1.38629 1.38629 1.38629 1.38629
2604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2605 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
2606 1.38629 1.38629 1.38629 1.38629
2607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2608 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
2609 1.38629 1.38629 1.38629 1.38629
2610 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
2611 71 1.98342 0.60779 2.04641 1.66785 71 c - - -
2612 1.38629 1.38629 1.38629 1.38629
2613 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2614 72 0.56139 2.08489 1.86185 1.89791 72 a - - -
2615 1.38629 1.38629 1.38629 1.38629
2616 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2617 73 0.56139 2.08489 1.86185 1.89791 73 a - - -
2618 1.38629 1.38629 1.38629 1.38629
2619 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2620 74 1.97267 2.25870 0.46443 2.05625 74 g - - -
2621 1.38629 1.38629 1.38629 1.38629
2622 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2623 75 1.98342 0.60779 2.04641 1.66785 75 c - - -
2624 1.38629 1.38629 1.38629 1.38629
2625 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2626 76 0.56139 2.08489 1.86185 1.89791 76 a - - -
2627 1.38629 1.38629 1.38629 1.38629
2628 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2629 77 1.97267 2.25870 0.46443 2.05625 77 g - - -
2630 1.38629 1.38629 1.38629 1.38629
2631 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2632 78 1.98342 0.60779 2.04641 1.66785 78 c - - -
2633 1.38629 1.38629 1.38629 1.38629
2634 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2635 79 1.98342 0.60779 2.04641 1.66785 79 c - - -
2636 1.38629 1.38629 1.38629 1.38629
2637 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2638 80 0.56139 2.08489 1.86185 1.89791 80 a - - -
2639 1.38629 1.38629 1.38629 1.38629
2640 0.03279 3.43399 * 1.46634 0.26236 0.00000 *
2641 //
2642 HMMER3/f [3.2.1 | June 2018]
2643 NAME long.11.aln
2644 LENG 84
2645 MAXL 179
2646 ALPH DNA
2647 RF no
2648 MM no
2649 CONS yes
2650 CS no
2651 MAP yes
2652 DATE Tue May 28 13:12:02 2019
2653 NSEQ 2
2654 EFFN 2.000000
2655 CKSUM 423631681
2656 STATS LOCAL MSV -8.6084 0.73180
2657 STATS LOCAL VITERBI -10.4859 0.73180
2658 STATS LOCAL FORWARD -2.8117 0.73180
2659 HMM A C G T
2660 m->m m->i m->d i->m i->i d->m d->d
2661 COMPO 1.35581 1.49833 1.41970 1.28384
2662 1.38629 1.38629 1.38629 1.38629
2663 0.33647 3.73767 1.33977 1.46634 0.26236 0.00000 *
2664 1 1.91091 1.78233 1.95844 0.61114 1 t - - -
2665 1.38629 1.38629 1.38629 1.38629
2666 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2667 2 1.91091 1.78233 1.95844 0.61114 2 t - - -
2668 1.38629 1.38629 1.38629 1.38629
2669 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2670 3 0.56139 2.08489 1.86185 1.89791 3 a - - -
2671 1.38629 1.38629 1.38629 1.38629
2672 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2673 4 1.97267 2.25870 0.46443 2.05625 4 g - - -
2674 1.38629 1.38629 1.38629 1.38629
2675 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2676 5 1.97267 2.25870 0.46443 2.05625 5 g - - -
2677 1.38629 1.38629 1.38629 1.38629
2678 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2679 6 1.98342 0.60779 2.04641 1.66785 6 c - - -
2680 1.38629 1.38629 1.38629 1.38629
2681 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2682 7 1.98342 0.60779 2.04641 1.66785 7 c - - -
2683 1.38629 1.38629 1.38629 1.38629
2684 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2685 8 0.56139 2.08489 1.86185 1.89791 8 a - - -
2686 1.38629 1.38629 1.38629 1.38629
2687 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2688 9 1.97267 2.25870 0.46443 2.05625 9 g - - -
2689 1.38629 1.38629 1.38629 1.38629
2690 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2691 10 1.91091 1.78233 1.95844 0.61114 10 t - - -
2692 1.38629 1.38629 1.38629 1.38629
2693 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2694 11 0.56139 2.08489 1.86185 1.89791 11 a - - -
2695 1.38629 1.38629 1.38629 1.38629
2696 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2697 12 1.97267 2.25870 0.46443 2.05625 12 g - - -
2698 1.38629 1.38629 1.38629 1.38629
2699 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2700 13 1.91091 1.78233 1.95844 0.61114 13 t - - -
2701 1.38629 1.38629 1.38629 1.38629
2702 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2703 14 0.56139 2.08489 1.86185 1.89791 14 a - - -
2704 1.38629 1.38629 1.38629 1.38629
2705 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
2706 15 2.01896 1.01168 2.12953 0.95527 15 t - - -
2707 1.38629 1.38629 1.38629 1.38629
2708 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2709 16 2.01896 1.01168 2.12953 0.95527 16 t - - -
2710 1.38629 1.38629 1.38629 1.38629
2711 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2712 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
2713 1.38629 1.38629 1.38629 1.38629
2714 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2715 18 1.08498 1.08670 1.94700 1.70340 18 a - - -
2716 1.38629 1.38629 1.38629 1.38629
2717 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2718 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
2719 1.38629 1.38629 1.38629 1.38629
2720 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2721 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
2722 1.38629 1.38629 1.38629 1.38629
2723 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2724 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
2725 1.38629 1.38629 1.38629 1.38629
2726 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2727 22 1.09289 1.89038 1.88803 1.01509 22 t - - -
2728 1.38629 1.38629 1.38629 1.38629
2729 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2730 23 1.09289 1.89038 1.88803 1.01509 23 t - - -
2731 1.38629 1.38629 1.38629 1.38629
2732 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2733 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
2734 1.38629 1.38629 1.38629 1.38629
2735 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2736 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
2737 1.38629 1.38629 1.38629 1.38629
2738 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2739 26 1.84050 1.95342 1.03654 1.06480 26 g - - -
2740 1.38629 1.38629 1.38629 1.38629
2741 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2742 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
2743 1.38629 1.38629 1.38629 1.38629
2744 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2745 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
2746 1.38629 1.38629 1.38629 1.38629
2747 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2748 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
2749 1.38629 1.38629 1.38629 1.38629
2750 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2751 30 2.01896 1.01168 2.12953 0.95527 30 t - - -
2752 1.38629 1.38629 1.38629 1.38629
2753 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2754 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
2755 1.38629 1.38629 1.38629 1.38629
2756 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2757 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
2758 1.38629 1.38629 1.38629 1.38629
2759 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2760 33 1.12273 2.17004 0.88086 1.92408 33 g - - -
2761 1.38629 1.38629 1.38629 1.38629
2762 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2763 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
2764 1.38629 1.38629 1.38629 1.38629
2765 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2766 35 2.01896 1.01168 2.12953 0.95527 35 t - - -
2767 1.38629 1.38629 1.38629 1.38629
2768 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2769 36 1.84050 1.95342 1.03654 1.06480 36 g - - -
2770 1.38629 1.38629 1.38629 1.38629
2771 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2772 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
2773 1.38629 1.38629 1.38629 1.38629
2774 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2775 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
2776 1.38629 1.38629 1.38629 1.38629
2777 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2778 39 1.08498 1.08670 1.94700 1.70340 39 a - - -
2779 1.38629 1.38629 1.38629 1.38629
2780 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2781 40 1.12273 2.17004 0.88086 1.92408 40 g - - -
2782 1.38629 1.38629 1.38629 1.38629
2783 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2784 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
2785 1.38629 1.38629 1.38629 1.38629
2786 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2787 42 2.01896 1.01168 2.12953 0.95527 42 t - - -
2788 1.38629 1.38629 1.38629 1.38629
2789 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2790 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
2791 1.38629 1.38629 1.38629 1.38629
2792 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2793 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
2794 1.38629 1.38629 1.38629 1.38629
2795 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2796 45 1.12273 2.17004 0.88086 1.92408 45 g - - -
2797 1.38629 1.38629 1.38629 1.38629
2798 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2799 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
2800 1.38629 1.38629 1.38629 1.38629
2801 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2802 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
2803 1.38629 1.38629 1.38629 1.38629
2804 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2805 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
2806 1.38629 1.38629 1.38629 1.38629
2807 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2808 49 1.08498 1.08670 1.94700 1.70340 49 a - - -
2809 1.38629 1.38629 1.38629 1.38629
2810 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2811 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
2812 1.38629 1.38629 1.38629 1.38629
2813 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2814 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
2815 1.38629 1.38629 1.38629 1.38629
2816 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2817 52 1.09289 1.89038 1.88803 1.01509 52 t - - -
2818 1.38629 1.38629 1.38629 1.38629
2819 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2820 53 1.09289 1.89038 1.88803 1.01509 53 t - - -
2821 1.38629 1.38629 1.38629 1.38629
2822 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2823 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
2824 1.38629 1.38629 1.38629 1.38629
2825 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2826 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
2827 1.38629 1.38629 1.38629 1.38629
2828 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2829 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
2830 1.38629 1.38629 1.38629 1.38629
2831 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2832 57 1.84050 1.95342 1.03654 1.06480 57 g - - -
2833 1.38629 1.38629 1.38629 1.38629
2834 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2835 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
2836 1.38629 1.38629 1.38629 1.38629
2837 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2838 59 1.12273 2.17004 0.88086 1.92408 59 g - - -
2839 1.38629 1.38629 1.38629 1.38629
2840 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2841 60 1.12273 2.17004 0.88086 1.92408 60 g - - -
2842 1.38629 1.38629 1.38629 1.38629
2843 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2844 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
2845 1.38629 1.38629 1.38629 1.38629
2846 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2847 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
2848 1.38629 1.38629 1.38629 1.38629
2849 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2850 63 1.08498 1.08670 1.94700 1.70340 63 a - - -
2851 1.38629 1.38629 1.38629 1.38629
2852 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2853 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
2854 1.38629 1.38629 1.38629 1.38629
2855 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
2856 65 0.56139 2.08489 1.86185 1.89791 65 a - - -
2857 1.38629 1.38629 1.38629 1.38629
2858 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2859 66 1.98342 0.60779 2.04641 1.66785 66 c - - -
2860 1.38629 1.38629 1.38629 1.38629
2861 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2862 67 1.91091 1.78233 1.95844 0.61114 67 t - - -
2863 1.38629 1.38629 1.38629 1.38629
2864 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2865 68 1.97267 2.25870 0.46443 2.05625 68 g - - -
2866 1.38629 1.38629 1.38629 1.38629
2867 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2868 69 1.97267 2.25870 0.46443 2.05625 69 g - - -
2869 1.38629 1.38629 1.38629 1.38629
2870 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2871 70 1.98342 0.60779 2.04641 1.66785 70 c - - -
2872 1.38629 1.38629 1.38629 1.38629
2873 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2874 71 1.98342 0.60779 2.04641 1.66785 71 c - - -
2875 1.38629 1.38629 1.38629 1.38629
2876 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
2877 72 2.31486 2.12647 2.41211 0.36768 72 t - - -
2878 1.38629 1.38629 1.38629 1.38629
2879 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2880 73 0.28818 2.60848 2.42319 2.42940 73 a - - -
2881 1.38629 1.38629 1.38629 1.38629
2882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2883 74 1.12273 2.17004 0.88086 1.92408 74 g - - -
2884 1.38629 1.38629 1.38629 1.38629
2885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2886 75 1.09289 1.89038 1.88803 1.01509 75 t - - -
2887 1.38629 1.38629 1.38629 1.38629
2888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2889 76 2.31486 2.12647 2.41211 0.36768 76 t - - -
2890 1.38629 1.38629 1.38629 1.38629
2891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2892 77 2.46232 0.33808 2.58153 2.07174 77 c - - -
2893 1.38629 1.38629 1.38629 1.38629
2894 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
2895 78 1.98342 0.60779 2.04641 1.66785 78 c - - -
2896 1.38629 1.38629 1.38629 1.38629
2897 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2898 79 0.56139 2.08489 1.86185 1.89791 79 a - - -
2899 1.38629 1.38629 1.38629 1.38629
2900 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2901 80 1.91091 1.78233 1.95844 0.61114 80 t - - -
2902 1.38629 1.38629 1.38629 1.38629
2903 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2904 81 1.97267 2.25870 0.46443 2.05625 81 g - - -
2905 1.38629 1.38629 1.38629 1.38629
2906 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2907 82 1.91091 1.78233 1.95844 0.61114 82 t - - -
2908 1.38629 1.38629 1.38629 1.38629
2909 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2910 83 1.97267 2.25870 0.46443 2.05625 83 g - - -
2911 1.38629 1.38629 1.38629 1.38629
2912 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
2913 84 1.91091 1.78233 1.95844 0.61114 84 t - - -
2914 1.38629 1.38629 1.38629 1.38629
2915 0.03279 3.43399 * 1.46634 0.26236 0.00000 *
2916 //
2917 HMMER3/f [3.2.1 | June 2018]
2918 NAME long.12.aln
2919 LENG 70
2920 MAXL 160
2921 ALPH DNA
2922 RF no
2923 MM no
2924 CONS yes
2925 CS no
2926 MAP yes
2927 DATE Tue May 28 13:12:03 2019
2928 NSEQ 2
2929 EFFN 2.000000
2930 CKSUM 1255752143
2931 STATS LOCAL MSV -8.3243 0.72219
2932 STATS LOCAL VITERBI -9.3425 0.72219
2933 STATS LOCAL FORWARD -3.3292 0.72219
2934 HMM A C G T
2935 m->m m->i m->d i->m i->i d->m d->d
2936 COMPO 1.40795 1.57292 1.70188 1.00628
2937 1.38629 1.38629 1.38629 1.38629
2938 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
2939 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
2940 1.38629 1.38629 1.38629 1.38629
2941 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2942 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
2943 1.38629 1.38629 1.38629 1.38629
2944 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2945 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
2946 1.38629 1.38629 1.38629 1.38629
2947 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2948 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
2949 1.38629 1.38629 1.38629 1.38629
2950 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2951 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
2952 1.38629 1.38629 1.38629 1.38629
2953 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2954 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
2955 1.38629 1.38629 1.38629 1.38629
2956 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2957 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
2958 1.38629 1.38629 1.38629 1.38629
2959 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2960 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
2961 1.38629 1.38629 1.38629 1.38629
2962 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2963 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
2964 1.38629 1.38629 1.38629 1.38629
2965 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2966 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
2967 1.38629 1.38629 1.38629 1.38629
2968 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2969 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
2970 1.38629 1.38629 1.38629 1.38629
2971 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2972 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
2973 1.38629 1.38629 1.38629 1.38629
2974 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2975 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
2976 1.38629 1.38629 1.38629 1.38629
2977 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2978 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
2979 1.38629 1.38629 1.38629 1.38629
2980 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2981 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
2982 1.38629 1.38629 1.38629 1.38629
2983 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2984 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
2985 1.38629 1.38629 1.38629 1.38629
2986 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2987 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
2988 1.38629 1.38629 1.38629 1.38629
2989 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2990 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
2991 1.38629 1.38629 1.38629 1.38629
2992 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2993 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
2994 1.38629 1.38629 1.38629 1.38629
2995 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2996 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
2997 1.38629 1.38629 1.38629 1.38629
2998 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2999 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
3000 1.38629 1.38629 1.38629 1.38629
3001 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3002 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
3003 1.38629 1.38629 1.38629 1.38629
3004 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3005 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
3006 1.38629 1.38629 1.38629 1.38629
3007 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3008 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
3009 1.38629 1.38629 1.38629 1.38629
3010 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3011 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
3012 1.38629 1.38629 1.38629 1.38629
3013 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3014 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
3015 1.38629 1.38629 1.38629 1.38629
3016 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3017 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
3018 1.38629 1.38629 1.38629 1.38629
3019 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3020 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
3021 1.38629 1.38629 1.38629 1.38629
3022 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3023 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
3024 1.38629 1.38629 1.38629 1.38629
3025 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3026 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
3027 1.38629 1.38629 1.38629 1.38629
3028 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3029 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
3030 1.38629 1.38629 1.38629 1.38629
3031 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3032 32 2.38910 2.82844 0.25233 2.62837 32 g - - -
3033 1.38629 1.38629 1.38629 1.38629
3034 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3035 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
3036 1.38629 1.38629 1.38629 1.38629
3037 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3038 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
3039 1.38629 1.38629 1.38629 1.38629
3040 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3041 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
3042 1.38629 1.38629 1.38629 1.38629
3043 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3044 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
3045 1.38629 1.38629 1.38629 1.38629
3046 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3047 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
3048 1.38629 1.38629 1.38629 1.38629
3049 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3050 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
3051 1.38629 1.38629 1.38629 1.38629
3052 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3053 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
3054 1.38629 1.38629 1.38629 1.38629
3055 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3056 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
3057 1.38629 1.38629 1.38629 1.38629
3058 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3059 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
3060 1.38629 1.38629 1.38629 1.38629
3061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3062 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
3063 1.38629 1.38629 1.38629 1.38629
3064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3065 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
3066 1.38629 1.38629 1.38629 1.38629
3067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3068 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
3069 1.38629 1.38629 1.38629 1.38629
3070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3071 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
3072 1.38629 1.38629 1.38629 1.38629
3073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3074 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
3075 1.38629 1.38629 1.38629 1.38629
3076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3077 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
3078 1.38629 1.38629 1.38629 1.38629
3079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3080 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
3081 1.38629 1.38629 1.38629 1.38629
3082 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3083 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
3084 1.38629 1.38629 1.38629 1.38629
3085 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3086 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
3087 1.38629 1.38629 1.38629 1.38629
3088 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3089 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
3090 1.38629 1.38629 1.38629 1.38629
3091 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3092 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
3093 1.38629 1.38629 1.38629 1.38629
3094 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3095 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
3096 1.38629 1.38629 1.38629 1.38629
3097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3098 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
3099 1.38629 1.38629 1.38629 1.38629
3100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3101 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
3102 1.38629 1.38629 1.38629 1.38629
3103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3104 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
3105 1.38629 1.38629 1.38629 1.38629
3106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3107 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
3108 1.38629 1.38629 1.38629 1.38629
3109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3110 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
3111 1.38629 1.38629 1.38629 1.38629
3112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3113 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
3114 1.38629 1.38629 1.38629 1.38629
3115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3116 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
3117 1.38629 1.38629 1.38629 1.38629
3118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3119 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
3120 1.38629 1.38629 1.38629 1.38629
3121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3122 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
3123 1.38629 1.38629 1.38629 1.38629
3124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3125 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
3126 1.38629 1.38629 1.38629 1.38629
3127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3128 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
3129 1.38629 1.38629 1.38629 1.38629
3130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3131 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
3132 1.38629 1.38629 1.38629 1.38629
3133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3134 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
3135 1.38629 1.38629 1.38629 1.38629
3136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3137 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
3138 1.38629 1.38629 1.38629 1.38629
3139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3140 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
3141 1.38629 1.38629 1.38629 1.38629
3142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3143 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
3144 1.38629 1.38629 1.38629 1.38629
3145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3146 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
3147 1.38629 1.38629 1.38629 1.38629
3148 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
3149 //
3150 HMMER3/f [3.2.1 | June 2018]
3151 NAME long.13.aln
3152 LENG 70
3153 MAXL 160
3154 ALPH DNA
3155 RF no
3156 MM no
3157 CONS yes
3158 CS no
3159 MAP yes
3160 DATE Tue May 28 13:12:03 2019
3161 NSEQ 2
3162 EFFN 2.000000
3163 CKSUM 3041144465
3164 STATS LOCAL MSV -8.3628 0.72226
3165 STATS LOCAL VITERBI -9.5188 0.72226
3166 STATS LOCAL FORWARD -3.8436 0.72226
3167 HMM A C G T
3168 m->m m->i m->d i->m i->i d->m d->d
3169 COMPO 1.60546 1.22177 1.71091 1.12765
3170 1.38629 1.38629 1.38629 1.38629
3171 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
3172 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
3173 1.38629 1.38629 1.38629 1.38629
3174 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3175 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
3176 1.38629 1.38629 1.38629 1.38629
3177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3178 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
3179 1.38629 1.38629 1.38629 1.38629
3180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3181 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
3182 1.38629 1.38629 1.38629 1.38629
3183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3184 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
3185 1.38629 1.38629 1.38629 1.38629
3186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3187 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
3188 1.38629 1.38629 1.38629 1.38629
3189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3190 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
3191 1.38629 1.38629 1.38629 1.38629
3192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3193 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
3194 1.38629 1.38629 1.38629 1.38629
3195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3196 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
3197 1.38629 1.38629 1.38629 1.38629
3198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3199 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
3200 1.38629 1.38629 1.38629 1.38629
3201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3202 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
3203 1.38629 1.38629 1.38629 1.38629
3204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3205 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
3206 1.38629 1.38629 1.38629 1.38629
3207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3208 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
3209 1.38629 1.38629 1.38629 1.38629
3210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3211 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
3212 1.38629 1.38629 1.38629 1.38629
3213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3214 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
3215 1.38629 1.38629 1.38629 1.38629
3216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3217 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
3218 1.38629 1.38629 1.38629 1.38629
3219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3220 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
3221 1.38629 1.38629 1.38629 1.38629
3222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3223 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
3224 1.38629 1.38629 1.38629 1.38629
3225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3226 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
3227 1.38629 1.38629 1.38629 1.38629
3228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3229 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
3230 1.38629 1.38629 1.38629 1.38629
3231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3232 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
3233 1.38629 1.38629 1.38629 1.38629
3234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3235 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
3236 1.38629 1.38629 1.38629 1.38629
3237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3238 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
3239 1.38629 1.38629 1.38629 1.38629
3240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3241 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
3242 1.38629 1.38629 1.38629 1.38629
3243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3244 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
3245 1.38629 1.38629 1.38629 1.38629
3246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3247 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
3248 1.38629 1.38629 1.38629 1.38629
3249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3250 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
3251 1.38629 1.38629 1.38629 1.38629
3252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3253 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
3254 1.38629 1.38629 1.38629 1.38629
3255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3256 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
3257 1.38629 1.38629 1.38629 1.38629
3258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3259 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
3260 1.38629 1.38629 1.38629 1.38629
3261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3262 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
3263 1.38629 1.38629 1.38629 1.38629
3264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3265 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
3266 1.38629 1.38629 1.38629 1.38629
3267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3268 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
3269 1.38629 1.38629 1.38629 1.38629
3270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3271 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
3272 1.38629 1.38629 1.38629 1.38629
3273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3274 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
3275 1.38629 1.38629 1.38629 1.38629
3276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3277 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
3278 1.38629 1.38629 1.38629 1.38629
3279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3280 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
3281 1.38629 1.38629 1.38629 1.38629
3282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3283 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
3284 1.38629 1.38629 1.38629 1.38629
3285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3286 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
3287 1.38629 1.38629 1.38629 1.38629
3288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3289 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
3290 1.38629 1.38629 1.38629 1.38629
3291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3292 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
3293 1.38629 1.38629 1.38629 1.38629
3294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3295 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
3296 1.38629 1.38629 1.38629 1.38629
3297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3298 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
3299 1.38629 1.38629 1.38629 1.38629
3300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3301 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
3302 1.38629 1.38629 1.38629 1.38629
3303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3304 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
3305 1.38629 1.38629 1.38629 1.38629
3306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3307 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
3308 1.38629 1.38629 1.38629 1.38629
3309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3310 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
3311 1.38629 1.38629 1.38629 1.38629
3312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3313 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
3314 1.38629 1.38629 1.38629 1.38629
3315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3316 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
3317 1.38629 1.38629 1.38629 1.38629
3318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3319 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
3320 1.38629 1.38629 1.38629 1.38629
3321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3322 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
3323 1.38629 1.38629 1.38629 1.38629
3324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3325 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
3326 1.38629 1.38629 1.38629 1.38629
3327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3328 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
3329 1.38629 1.38629 1.38629 1.38629
3330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3331 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
3332 1.38629 1.38629 1.38629 1.38629
3333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3334 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
3335 1.38629 1.38629 1.38629 1.38629
3336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3337 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
3338 1.38629 1.38629 1.38629 1.38629
3339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3340 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
3341 1.38629 1.38629 1.38629 1.38629
3342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3343 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
3344 1.38629 1.38629 1.38629 1.38629
3345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3346 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
3347 1.38629 1.38629 1.38629 1.38629
3348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3349 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
3350 1.38629 1.38629 1.38629 1.38629
3351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3352 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
3353 1.38629 1.38629 1.38629 1.38629
3354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3355 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
3356 1.38629 1.38629 1.38629 1.38629
3357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3358 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
3359 1.38629 1.38629 1.38629 1.38629
3360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3361 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
3362 1.38629 1.38629 1.38629 1.38629
3363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3364 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
3365 1.38629 1.38629 1.38629 1.38629
3366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3367 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
3368 1.38629 1.38629 1.38629 1.38629
3369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3370 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
3371 1.38629 1.38629 1.38629 1.38629
3372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3373 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
3374 1.38629 1.38629 1.38629 1.38629
3375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3376 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
3377 1.38629 1.38629 1.38629 1.38629
3378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3379 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
3380 1.38629 1.38629 1.38629 1.38629
3381 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
3382 //
3383 HMMER3/f [3.2.1 | June 2018]
3384 NAME long.14.aln
3385 LENG 70
3386 MAXL 160
3387 ALPH DNA
3388 RF no
3389 MM no
3390 CONS yes
3391 CS no
3392 MAP yes
3393 DATE Tue May 28 13:12:02 2019
3394 NSEQ 2
3395 EFFN 2.000000
3396 CKSUM 1031720992
3397 STATS LOCAL MSV -8.3941 0.72237
3398 STATS LOCAL VITERBI -9.1821 0.72237
3399 STATS LOCAL FORWARD -3.5771 0.72237
3400 HMM A C G T
3401 m->m m->i m->d i->m i->i d->m d->d
3402 COMPO 1.44271 1.49503 1.75234 1.00484
3403 1.38629 1.38629 1.38629 1.38629
3404 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
3405 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
3406 1.38629 1.38629 1.38629 1.38629
3407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3408 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
3409 1.38629 1.38629 1.38629 1.38629
3410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3411 3 2.38910 2.82844 0.25233 2.62837 3 g - - -
3412 1.38629 1.38629 1.38629 1.38629
3413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3414 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
3415 1.38629 1.38629 1.38629 1.38629
3416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3417 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
3418 1.38629 1.38629 1.38629 1.38629
3419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3420 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
3421 1.38629 1.38629 1.38629 1.38629
3422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3423 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
3424 1.38629 1.38629 1.38629 1.38629
3425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3426 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
3427 1.38629 1.38629 1.38629 1.38629
3428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3429 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
3430 1.38629 1.38629 1.38629 1.38629
3431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3432 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
3433 1.38629 1.38629 1.38629 1.38629
3434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3435 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
3436 1.38629 1.38629 1.38629 1.38629
3437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3438 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
3439 1.38629 1.38629 1.38629 1.38629
3440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3441 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
3442 1.38629 1.38629 1.38629 1.38629
3443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3444 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
3445 1.38629 1.38629 1.38629 1.38629
3446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3447 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
3448 1.38629 1.38629 1.38629 1.38629
3449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3450 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
3451 1.38629 1.38629 1.38629 1.38629
3452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3453 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
3454 1.38629 1.38629 1.38629 1.38629
3455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3456 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
3457 1.38629 1.38629 1.38629 1.38629
3458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3459 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
3460 1.38629 1.38629 1.38629 1.38629
3461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3462 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
3463 1.38629 1.38629 1.38629 1.38629
3464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3465 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
3466 1.38629 1.38629 1.38629 1.38629
3467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3468 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
3469 1.38629 1.38629 1.38629 1.38629
3470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3471 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
3472 1.38629 1.38629 1.38629 1.38629
3473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3474 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
3475 1.38629 1.38629 1.38629 1.38629
3476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3477 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
3478 1.38629 1.38629 1.38629 1.38629
3479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3480 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
3481 1.38629 1.38629 1.38629 1.38629
3482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3483 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
3484 1.38629 1.38629 1.38629 1.38629
3485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3486 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
3487 1.38629 1.38629 1.38629 1.38629
3488 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3489 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
3490 1.38629 1.38629 1.38629 1.38629
3491 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3492 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
3493 1.38629 1.38629 1.38629 1.38629
3494 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3495 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
3496 1.38629 1.38629 1.38629 1.38629
3497 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3498 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
3499 1.38629 1.38629 1.38629 1.38629
3500 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3501 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
3502 1.38629 1.38629 1.38629 1.38629
3503 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3504 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
3505 1.38629 1.38629 1.38629 1.38629
3506 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3507 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
3508 1.38629 1.38629 1.38629 1.38629
3509 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3510 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
3511 1.38629 1.38629 1.38629 1.38629
3512 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3513 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
3514 1.38629 1.38629 1.38629 1.38629
3515 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3516 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
3517 1.38629 1.38629 1.38629 1.38629
3518 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3519 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
3520 1.38629 1.38629 1.38629 1.38629
3521 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3522 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
3523 1.38629 1.38629 1.38629 1.38629
3524 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3525 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
3526 1.38629 1.38629 1.38629 1.38629
3527 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3528 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
3529 1.38629 1.38629 1.38629 1.38629
3530 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3531 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
3532 1.38629 1.38629 1.38629 1.38629
3533 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3534 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
3535 1.38629 1.38629 1.38629 1.38629
3536 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3537 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
3538 1.38629 1.38629 1.38629 1.38629
3539 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3540 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
3541 1.38629 1.38629 1.38629 1.38629
3542 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3543 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
3544 1.38629 1.38629 1.38629 1.38629
3545 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3546 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
3547 1.38629 1.38629 1.38629 1.38629
3548 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3549 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
3550 1.38629 1.38629 1.38629 1.38629
3551 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3552 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
3553 1.38629 1.38629 1.38629 1.38629
3554 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3555 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
3556 1.38629 1.38629 1.38629 1.38629
3557 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3558 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
3559 1.38629 1.38629 1.38629 1.38629
3560 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3561 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
3562 1.38629 1.38629 1.38629 1.38629
3563 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3564 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
3565 1.38629 1.38629 1.38629 1.38629
3566 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3567 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
3568 1.38629 1.38629 1.38629 1.38629
3569 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3570 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
3571 1.38629 1.38629 1.38629 1.38629
3572 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3573 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
3574 1.38629 1.38629 1.38629 1.38629
3575 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3576 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
3577 1.38629 1.38629 1.38629 1.38629
3578 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3579 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
3580 1.38629 1.38629 1.38629 1.38629
3581 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3582 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
3583 1.38629 1.38629 1.38629 1.38629
3584 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3585 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
3586 1.38629 1.38629 1.38629 1.38629
3587 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3588 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
3589 1.38629 1.38629 1.38629 1.38629
3590 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3591 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
3592 1.38629 1.38629 1.38629 1.38629
3593 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3594 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
3595 1.38629 1.38629 1.38629 1.38629
3596 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3597 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
3598 1.38629 1.38629 1.38629 1.38629
3599 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3600 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
3601 1.38629 1.38629 1.38629 1.38629
3602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3603 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
3604 1.38629 1.38629 1.38629 1.38629
3605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3606 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
3607 1.38629 1.38629 1.38629 1.38629
3608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3609 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
3610 1.38629 1.38629 1.38629 1.38629
3611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3612 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
3613 1.38629 1.38629 1.38629 1.38629
3614 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
3615 //
3616 HMMER3/f [3.2.1 | June 2018]
3617 NAME long.15.aln
3618 LENG 70
3619 MAXL 160
3620 ALPH DNA
3621 RF no
3622 MM no
3623 CONS yes
3624 CS no
3625 MAP yes
3626 DATE Tue May 28 13:12:02 2019
3627 NSEQ 2
3628 EFFN 2.000000
3629 CKSUM 503286853
3630 STATS LOCAL MSV -8.0267 0.72173
3631 STATS LOCAL VITERBI -9.2116 0.72173
3632 STATS LOCAL FORWARD -3.7261 0.72173
3633 HMM A C G T
3634 m->m m->i m->d i->m i->i d->m d->d
3635 COMPO 1.60915 1.17831 1.57427 1.25532
3636 1.38629 1.38629 1.38629 1.38629
3637 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
3638 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
3639 1.38629 1.38629 1.38629 1.38629
3640 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3641 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
3642 1.38629 1.38629 1.38629 1.38629
3643 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3644 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
3645 1.38629 1.38629 1.38629 1.38629
3646 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3647 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
3648 1.38629 1.38629 1.38629 1.38629
3649 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3650 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
3651 1.38629 1.38629 1.38629 1.38629
3652 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3653 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
3654 1.38629 1.38629 1.38629 1.38629
3655 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3656 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
3657 1.38629 1.38629 1.38629 1.38629
3658 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3659 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
3660 1.38629 1.38629 1.38629 1.38629
3661 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3662 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
3663 1.38629 1.38629 1.38629 1.38629
3664 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3665 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
3666 1.38629 1.38629 1.38629 1.38629
3667 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3668 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
3669 1.38629 1.38629 1.38629 1.38629
3670 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3671 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
3672 1.38629 1.38629 1.38629 1.38629
3673 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3674 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
3675 1.38629 1.38629 1.38629 1.38629
3676 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3677 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
3678 1.38629 1.38629 1.38629 1.38629
3679 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3680 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
3681 1.38629 1.38629 1.38629 1.38629
3682 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3683 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
3684 1.38629 1.38629 1.38629 1.38629
3685 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3686 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
3687 1.38629 1.38629 1.38629 1.38629
3688 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3689 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
3690 1.38629 1.38629 1.38629 1.38629
3691 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3692 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
3693 1.38629 1.38629 1.38629 1.38629
3694 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3695 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
3696 1.38629 1.38629 1.38629 1.38629
3697 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3698 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
3699 1.38629 1.38629 1.38629 1.38629
3700 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3701 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
3702 1.38629 1.38629 1.38629 1.38629
3703 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3704 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
3705 1.38629 1.38629 1.38629 1.38629
3706 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3707 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
3708 1.38629 1.38629 1.38629 1.38629
3709 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3710 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
3711 1.38629 1.38629 1.38629 1.38629
3712 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3713 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
3714 1.38629 1.38629 1.38629 1.38629
3715 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3716 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
3717 1.38629 1.38629 1.38629 1.38629
3718 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3719 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
3720 1.38629 1.38629 1.38629 1.38629
3721 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3722 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
3723 1.38629 1.38629 1.38629 1.38629
3724 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3725 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
3726 1.38629 1.38629 1.38629 1.38629
3727 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3728 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
3729 1.38629 1.38629 1.38629 1.38629
3730 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3731 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
3732 1.38629 1.38629 1.38629 1.38629
3733 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3734 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
3735 1.38629 1.38629 1.38629 1.38629
3736 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3737 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
3738 1.38629 1.38629 1.38629 1.38629
3739 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3740 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
3741 1.38629 1.38629 1.38629 1.38629
3742 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3743 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
3744 1.38629 1.38629 1.38629 1.38629
3745 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3746 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
3747 1.38629 1.38629 1.38629 1.38629
3748 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3749 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
3750 1.38629 1.38629 1.38629 1.38629
3751 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3752 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
3753 1.38629 1.38629 1.38629 1.38629
3754 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3755 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
3756 1.38629 1.38629 1.38629 1.38629
3757 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3758 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
3759 1.38629 1.38629 1.38629 1.38629
3760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3761 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
3762 1.38629 1.38629 1.38629 1.38629
3763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3764 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
3765 1.38629 1.38629 1.38629 1.38629
3766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3767 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
3768 1.38629 1.38629 1.38629 1.38629
3769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3770 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
3771 1.38629 1.38629 1.38629 1.38629
3772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3773 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
3774 1.38629 1.38629 1.38629 1.38629
3775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3776 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
3777 1.38629 1.38629 1.38629 1.38629
3778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3779 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
3780 1.38629 1.38629 1.38629 1.38629
3781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3782 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
3783 1.38629 1.38629 1.38629 1.38629
3784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3785 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
3786 1.38629 1.38629 1.38629 1.38629
3787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3788 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
3789 1.38629 1.38629 1.38629 1.38629
3790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3791 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
3792 1.38629 1.38629 1.38629 1.38629
3793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3794 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
3795 1.38629 1.38629 1.38629 1.38629
3796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3797 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
3798 1.38629 1.38629 1.38629 1.38629
3799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3800 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
3801 1.38629 1.38629 1.38629 1.38629
3802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3803 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
3804 1.38629 1.38629 1.38629 1.38629
3805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3806 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
3807 1.38629 1.38629 1.38629 1.38629
3808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3809 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
3810 1.38629 1.38629 1.38629 1.38629
3811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3812 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
3813 1.38629 1.38629 1.38629 1.38629
3814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3815 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
3816 1.38629 1.38629 1.38629 1.38629
3817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3818 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
3819 1.38629 1.38629 1.38629 1.38629
3820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3821 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
3822 1.38629 1.38629 1.38629 1.38629
3823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3824 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
3825 1.38629 1.38629 1.38629 1.38629
3826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3827 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
3828 1.38629 1.38629 1.38629 1.38629
3829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3830 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
3831 1.38629 1.38629 1.38629 1.38629
3832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3833 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
3834 1.38629 1.38629 1.38629 1.38629
3835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3836 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
3837 1.38629 1.38629 1.38629 1.38629
3838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3839 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
3840 1.38629 1.38629 1.38629 1.38629
3841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3842 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
3843 1.38629 1.38629 1.38629 1.38629
3844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3845 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
3846 1.38629 1.38629 1.38629 1.38629
3847 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
3848 //
3849 HMMER3/f [3.2.1 | June 2018]
3850 NAME long.16.aln
3851 LENG 70
3852 MAXL 160
3853 ALPH DNA
3854 RF no
3855 MM no
3856 CONS yes
3857 CS no
3858 MAP yes
3859 DATE Tue May 28 13:12:02 2019
3860 NSEQ 2
3861 EFFN 2.000000
3862 CKSUM 3834571115
3863 STATS LOCAL MSV -8.2739 0.72217
3864 STATS LOCAL VITERBI -9.2034 0.72217
3865 STATS LOCAL FORWARD -3.3554 0.72217
3866 HMM A C G T
3867 m->m m->i m->d i->m i->i d->m d->d
3868 COMPO 1.28694 1.39659 1.54629 1.33404
3869 1.38629 1.38629 1.38629 1.38629
3870 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
3871 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
3872 1.38629 1.38629 1.38629 1.38629
3873 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3874 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
3875 1.38629 1.38629 1.38629 1.38629
3876 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3877 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
3878 1.38629 1.38629 1.38629 1.38629
3879 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3880 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
3881 1.38629 1.38629 1.38629 1.38629
3882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3883 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
3884 1.38629 1.38629 1.38629 1.38629
3885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3886 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
3887 1.38629 1.38629 1.38629 1.38629
3888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3889 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
3890 1.38629 1.38629 1.38629 1.38629
3891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3892 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
3893 1.38629 1.38629 1.38629 1.38629
3894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3895 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
3896 1.38629 1.38629 1.38629 1.38629
3897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3898 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
3899 1.38629 1.38629 1.38629 1.38629
3900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3901 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
3902 1.38629 1.38629 1.38629 1.38629
3903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3904 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
3905 1.38629 1.38629 1.38629 1.38629
3906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3907 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
3908 1.38629 1.38629 1.38629 1.38629
3909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3910 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
3911 1.38629 1.38629 1.38629 1.38629
3912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3913 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
3914 1.38629 1.38629 1.38629 1.38629
3915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3916 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
3917 1.38629 1.38629 1.38629 1.38629
3918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3919 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
3920 1.38629 1.38629 1.38629 1.38629
3921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3922 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
3923 1.38629 1.38629 1.38629 1.38629
3924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3925 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
3926 1.38629 1.38629 1.38629 1.38629
3927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3928 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
3929 1.38629 1.38629 1.38629 1.38629
3930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3931 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
3932 1.38629 1.38629 1.38629 1.38629
3933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3934 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
3935 1.38629 1.38629 1.38629 1.38629
3936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3937 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
3938 1.38629 1.38629 1.38629 1.38629
3939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3940 24 1.08498 1.08670 1.94700 1.70340 24 a - - -
3941 1.38629 1.38629 1.38629 1.38629
3942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3943 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
3944 1.38629 1.38629 1.38629 1.38629
3945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3946 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
3947 1.38629 1.38629 1.38629 1.38629
3948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3949 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
3950 1.38629 1.38629 1.38629 1.38629
3951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3952 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
3953 1.38629 1.38629 1.38629 1.38629
3954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3955 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
3956 1.38629 1.38629 1.38629 1.38629
3957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3958 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
3959 1.38629 1.38629 1.38629 1.38629
3960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3961 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
3962 1.38629 1.38629 1.38629 1.38629
3963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3964 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
3965 1.38629 1.38629 1.38629 1.38629
3966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3967 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
3968 1.38629 1.38629 1.38629 1.38629
3969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3970 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
3971 1.38629 1.38629 1.38629 1.38629
3972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3973 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
3974 1.38629 1.38629 1.38629 1.38629
3975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3976 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
3977 1.38629 1.38629 1.38629 1.38629
3978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3979 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
3980 1.38629 1.38629 1.38629 1.38629
3981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3982 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
3983 1.38629 1.38629 1.38629 1.38629
3984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3985 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
3986 1.38629 1.38629 1.38629 1.38629
3987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3988 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
3989 1.38629 1.38629 1.38629 1.38629
3990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3991 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
3992 1.38629 1.38629 1.38629 1.38629
3993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3994 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
3995 1.38629 1.38629 1.38629 1.38629
3996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3997 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
3998 1.38629 1.38629 1.38629 1.38629
3999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4000 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
4001 1.38629 1.38629 1.38629 1.38629
4002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4003 45 1.09289 1.89038 1.88803 1.01509 45 t - - -
4004 1.38629 1.38629 1.38629 1.38629
4005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4006 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
4007 1.38629 1.38629 1.38629 1.38629
4008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4009 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
4010 1.38629 1.38629 1.38629 1.38629
4011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4012 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
4013 1.38629 1.38629 1.38629 1.38629
4014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4015 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
4016 1.38629 1.38629 1.38629 1.38629
4017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4018 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
4019 1.38629 1.38629 1.38629 1.38629
4020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4021 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
4022 1.38629 1.38629 1.38629 1.38629
4023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4024 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
4025 1.38629 1.38629 1.38629 1.38629
4026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4027 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
4028 1.38629 1.38629 1.38629 1.38629
4029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4030 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
4031 1.38629 1.38629 1.38629 1.38629
4032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4033 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
4034 1.38629 1.38629 1.38629 1.38629
4035 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4036 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
4037 1.38629 1.38629 1.38629 1.38629
4038 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4039 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
4040 1.38629 1.38629 1.38629 1.38629
4041 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4042 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
4043 1.38629 1.38629 1.38629 1.38629
4044 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4045 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
4046 1.38629 1.38629 1.38629 1.38629
4047 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4048 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
4049 1.38629 1.38629 1.38629 1.38629
4050 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4051 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
4052 1.38629 1.38629 1.38629 1.38629
4053 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4054 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
4055 1.38629 1.38629 1.38629 1.38629
4056 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4057 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
4058 1.38629 1.38629 1.38629 1.38629
4059 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4060 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
4061 1.38629 1.38629 1.38629 1.38629
4062 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4063 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
4064 1.38629 1.38629 1.38629 1.38629
4065 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4066 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
4067 1.38629 1.38629 1.38629 1.38629
4068 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4069 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
4070 1.38629 1.38629 1.38629 1.38629
4071 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4072 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
4073 1.38629 1.38629 1.38629 1.38629
4074 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4075 69 1.88401 1.14290 1.03416 1.75097 69 g - - -
4076 1.38629 1.38629 1.38629 1.38629
4077 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4078 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
4079 1.38629 1.38629 1.38629 1.38629
4080 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
4081 //
4082 HMMER3/f [3.2.1 | June 2018]
4083 NAME long.17.aln
4084 LENG 70
4085 MAXL 160
4086 ALPH DNA
4087 RF no
4088 MM no
4089 CONS yes
4090 CS no
4091 MAP yes
4092 DATE Tue May 28 13:12:04 2019
4093 NSEQ 2
4094 EFFN 2.000000
4095 CKSUM 3997138551
4096 STATS LOCAL MSV -8.0960 0.71951
4097 STATS LOCAL VITERBI -9.1776 0.71951
4098 STATS LOCAL FORWARD -3.5659 0.71951
4099 HMM A C G T
4100 m->m m->i m->d i->m i->i d->m d->d
4101 COMPO 1.16459 1.99242 1.12093 1.48895
4102 1.38629 1.38629 1.38629 1.38629
4103 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
4104 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
4105 1.38629 1.38629 1.38629 1.38629
4106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4107 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
4108 1.38629 1.38629 1.38629 1.38629
4109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4110 3 2.38910 2.82844 0.25233 2.62837 3 g - - -
4111 1.38629 1.38629 1.38629 1.38629
4112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4113 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
4114 1.38629 1.38629 1.38629 1.38629
4115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4116 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
4117 1.38629 1.38629 1.38629 1.38629
4118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4119 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
4120 1.38629 1.38629 1.38629 1.38629
4121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4122 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
4123 1.38629 1.38629 1.38629 1.38629
4124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4125 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
4126 1.38629 1.38629 1.38629 1.38629
4127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4128 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
4129 1.38629 1.38629 1.38629 1.38629
4130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4131 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
4132 1.38629 1.38629 1.38629 1.38629
4133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4134 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
4135 1.38629 1.38629 1.38629 1.38629
4136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4137 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
4138 1.38629 1.38629 1.38629 1.38629
4139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4140 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
4141 1.38629 1.38629 1.38629 1.38629
4142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4143 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
4144 1.38629 1.38629 1.38629 1.38629
4145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4146 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
4147 1.38629 1.38629 1.38629 1.38629
4148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4149 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
4150 1.38629 1.38629 1.38629 1.38629
4151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4152 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
4153 1.38629 1.38629 1.38629 1.38629
4154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4155 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
4156 1.38629 1.38629 1.38629 1.38629
4157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4158 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
4159 1.38629 1.38629 1.38629 1.38629
4160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4161 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
4162 1.38629 1.38629 1.38629 1.38629
4163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4164 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
4165 1.38629 1.38629 1.38629 1.38629
4166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4167 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
4168 1.38629 1.38629 1.38629 1.38629
4169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4170 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
4171 1.38629 1.38629 1.38629 1.38629
4172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4173 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
4174 1.38629 1.38629 1.38629 1.38629
4175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4176 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
4177 1.38629 1.38629 1.38629 1.38629
4178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4179 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
4180 1.38629 1.38629 1.38629 1.38629
4181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4182 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
4183 1.38629 1.38629 1.38629 1.38629
4184 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4185 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
4186 1.38629 1.38629 1.38629 1.38629
4187 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4188 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
4189 1.38629 1.38629 1.38629 1.38629
4190 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4191 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
4192 1.38629 1.38629 1.38629 1.38629
4193 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4194 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
4195 1.38629 1.38629 1.38629 1.38629
4196 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4197 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
4198 1.38629 1.38629 1.38629 1.38629
4199 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4200 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
4201 1.38629 1.38629 1.38629 1.38629
4202 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4203 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
4204 1.38629 1.38629 1.38629 1.38629
4205 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4206 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
4207 1.38629 1.38629 1.38629 1.38629
4208 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4209 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
4210 1.38629 1.38629 1.38629 1.38629
4211 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4212 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
4213 1.38629 1.38629 1.38629 1.38629
4214 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4215 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
4216 1.38629 1.38629 1.38629 1.38629
4217 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4218 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
4219 1.38629 1.38629 1.38629 1.38629
4220 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4221 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
4222 1.38629 1.38629 1.38629 1.38629
4223 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4224 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
4225 1.38629 1.38629 1.38629 1.38629
4226 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4227 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
4228 1.38629 1.38629 1.38629 1.38629
4229 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4230 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
4231 1.38629 1.38629 1.38629 1.38629
4232 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4233 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
4234 1.38629 1.38629 1.38629 1.38629
4235 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4236 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
4237 1.38629 1.38629 1.38629 1.38629
4238 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4239 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
4240 1.38629 1.38629 1.38629 1.38629
4241 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4242 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
4243 1.38629 1.38629 1.38629 1.38629
4244 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4245 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
4246 1.38629 1.38629 1.38629 1.38629
4247 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4248 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
4249 1.38629 1.38629 1.38629 1.38629
4250 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4251 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
4252 1.38629 1.38629 1.38629 1.38629
4253 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4254 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
4255 1.38629 1.38629 1.38629 1.38629
4256 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4257 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
4258 1.38629 1.38629 1.38629 1.38629
4259 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4260 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
4261 1.38629 1.38629 1.38629 1.38629
4262 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4263 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
4264 1.38629 1.38629 1.38629 1.38629
4265 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4266 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
4267 1.38629 1.38629 1.38629 1.38629
4268 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4269 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
4270 1.38629 1.38629 1.38629 1.38629
4271 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4272 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
4273 1.38629 1.38629 1.38629 1.38629
4274 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4275 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
4276 1.38629 1.38629 1.38629 1.38629
4277 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4278 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
4279 1.38629 1.38629 1.38629 1.38629
4280 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4281 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
4282 1.38629 1.38629 1.38629 1.38629
4283 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4284 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
4285 1.38629 1.38629 1.38629 1.38629
4286 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4287 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
4288 1.38629 1.38629 1.38629 1.38629
4289 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4290 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
4291 1.38629 1.38629 1.38629 1.38629
4292 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4293 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
4294 1.38629 1.38629 1.38629 1.38629
4295 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4296 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
4297 1.38629 1.38629 1.38629 1.38629
4298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4299 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
4300 1.38629 1.38629 1.38629 1.38629
4301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4302 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
4303 1.38629 1.38629 1.38629 1.38629
4304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4305 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
4306 1.38629 1.38629 1.38629 1.38629
4307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4308 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
4309 1.38629 1.38629 1.38629 1.38629
4310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4311 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
4312 1.38629 1.38629 1.38629 1.38629
4313 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
4314 //
4315 HMMER3/f [3.2.1 | June 2018]
4316 NAME long.18.aln
4317 LENG 70
4318 MAXL 160
4319 ALPH DNA
4320 RF no
4321 MM no
4322 CONS yes
4323 CS no
4324 MAP yes
4325 DATE Tue May 28 13:12:04 2019
4326 NSEQ 2
4327 EFFN 2.000000
4328 CKSUM 3982440997
4329 STATS LOCAL MSV -8.2321 0.72111
4330 STATS LOCAL VITERBI -9.3642 0.72111
4331 STATS LOCAL FORWARD -3.8226 0.72111
4332 HMM A C G T
4333 m->m m->i m->d i->m i->i d->m d->d
4334 COMPO 1.52296 1.42201 1.37492 1.24533
4335 1.38629 1.38629 1.38629 1.38629
4336 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
4337 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
4338 1.38629 1.38629 1.38629 1.38629
4339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4340 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
4341 1.38629 1.38629 1.38629 1.38629
4342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4343 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
4344 1.38629 1.38629 1.38629 1.38629
4345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4346 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
4347 1.38629 1.38629 1.38629 1.38629
4348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4349 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
4350 1.38629 1.38629 1.38629 1.38629
4351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4352 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
4353 1.38629 1.38629 1.38629 1.38629
4354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4355 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
4356 1.38629 1.38629 1.38629 1.38629
4357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4358 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
4359 1.38629 1.38629 1.38629 1.38629
4360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4361 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
4362 1.38629 1.38629 1.38629 1.38629
4363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4364 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
4365 1.38629 1.38629 1.38629 1.38629
4366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4367 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
4368 1.38629 1.38629 1.38629 1.38629
4369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4370 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
4371 1.38629 1.38629 1.38629 1.38629
4372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4373 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
4374 1.38629 1.38629 1.38629 1.38629
4375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4376 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
4377 1.38629 1.38629 1.38629 1.38629
4378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4379 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
4380 1.38629 1.38629 1.38629 1.38629
4381 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4382 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
4383 1.38629 1.38629 1.38629 1.38629
4384 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4385 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
4386 1.38629 1.38629 1.38629 1.38629
4387 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4388 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
4389 1.38629 1.38629 1.38629 1.38629
4390 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4391 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
4392 1.38629 1.38629 1.38629 1.38629
4393 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4394 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
4395 1.38629 1.38629 1.38629 1.38629
4396 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4397 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
4398 1.38629 1.38629 1.38629 1.38629
4399 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4400 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
4401 1.38629 1.38629 1.38629 1.38629
4402 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4403 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
4404 1.38629 1.38629 1.38629 1.38629
4405 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4406 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
4407 1.38629 1.38629 1.38629 1.38629
4408 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4409 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
4410 1.38629 1.38629 1.38629 1.38629
4411 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4412 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
4413 1.38629 1.38629 1.38629 1.38629
4414 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4415 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
4416 1.38629 1.38629 1.38629 1.38629
4417 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4418 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
4419 1.38629 1.38629 1.38629 1.38629
4420 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4421 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
4422 1.38629 1.38629 1.38629 1.38629
4423 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4424 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
4425 1.38629 1.38629 1.38629 1.38629
4426 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4427 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
4428 1.38629 1.38629 1.38629 1.38629
4429 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4430 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
4431 1.38629 1.38629 1.38629 1.38629
4432 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4433 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
4434 1.38629 1.38629 1.38629 1.38629
4435 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4436 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
4437 1.38629 1.38629 1.38629 1.38629
4438 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4439 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
4440 1.38629 1.38629 1.38629 1.38629
4441 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4442 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
4443 1.38629 1.38629 1.38629 1.38629
4444 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4445 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
4446 1.38629 1.38629 1.38629 1.38629
4447 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4448 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
4449 1.38629 1.38629 1.38629 1.38629
4450 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4451 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
4452 1.38629 1.38629 1.38629 1.38629
4453 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4454 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
4455 1.38629 1.38629 1.38629 1.38629
4456 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4457 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
4458 1.38629 1.38629 1.38629 1.38629
4459 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4460 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
4461 1.38629 1.38629 1.38629 1.38629
4462 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4463 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
4464 1.38629 1.38629 1.38629 1.38629
4465 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4466 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
4467 1.38629 1.38629 1.38629 1.38629
4468 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4469 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
4470 1.38629 1.38629 1.38629 1.38629
4471 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4472 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
4473 1.38629 1.38629 1.38629 1.38629
4474 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4475 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
4476 1.38629 1.38629 1.38629 1.38629
4477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4478 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
4479 1.38629 1.38629 1.38629 1.38629
4480 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4481 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
4482 1.38629 1.38629 1.38629 1.38629
4483 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4484 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
4485 1.38629 1.38629 1.38629 1.38629
4486 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4487 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
4488 1.38629 1.38629 1.38629 1.38629
4489 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4490 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
4491 1.38629 1.38629 1.38629 1.38629
4492 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4493 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
4494 1.38629 1.38629 1.38629 1.38629
4495 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4496 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
4497 1.38629 1.38629 1.38629 1.38629
4498 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4499 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
4500 1.38629 1.38629 1.38629 1.38629
4501 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4502 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
4503 1.38629 1.38629 1.38629 1.38629
4504 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4505 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
4506 1.38629 1.38629 1.38629 1.38629
4507 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4508 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
4509 1.38629 1.38629 1.38629 1.38629
4510 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4511 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
4512 1.38629 1.38629 1.38629 1.38629
4513 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4514 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
4515 1.38629 1.38629 1.38629 1.38629
4516 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4517 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
4518 1.38629 1.38629 1.38629 1.38629
4519 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4520 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
4521 1.38629 1.38629 1.38629 1.38629
4522 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4523 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
4524 1.38629 1.38629 1.38629 1.38629
4525 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4526 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
4527 1.38629 1.38629 1.38629 1.38629
4528 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4529 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
4530 1.38629 1.38629 1.38629 1.38629
4531 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4532 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
4533 1.38629 1.38629 1.38629 1.38629
4534 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4535 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
4536 1.38629 1.38629 1.38629 1.38629
4537 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4538 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
4539 1.38629 1.38629 1.38629 1.38629
4540 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4541 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
4542 1.38629 1.38629 1.38629 1.38629
4543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4544 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
4545 1.38629 1.38629 1.38629 1.38629
4546 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
4547 //
4548 HMMER3/f [3.2.1 | June 2018]
4549 NAME long.19.aln
4550 LENG 70
4551 MAXL 160
4552 ALPH DNA
4553 RF no
4554 MM no
4555 CONS yes
4556 CS no
4557 MAP yes
4558 DATE Tue May 28 13:12:04 2019
4559 NSEQ 2
4560 EFFN 2.000000
4561 CKSUM 2532513137
4562 STATS LOCAL MSV -8.0066 0.72124
4563 STATS LOCAL VITERBI -9.2158 0.72124
4564 STATS LOCAL FORWARD -3.4919 0.72124
4565 HMM A C G T
4566 m->m m->i m->d i->m i->i d->m d->d
4567 COMPO 1.31433 1.38953 1.56917 1.29487
4568 1.38629 1.38629 1.38629 1.38629
4569 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
4570 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
4571 1.38629 1.38629 1.38629 1.38629
4572 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4573 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
4574 1.38629 1.38629 1.38629 1.38629
4575 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4576 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
4577 1.38629 1.38629 1.38629 1.38629
4578 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4579 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
4580 1.38629 1.38629 1.38629 1.38629
4581 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4582 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
4583 1.38629 1.38629 1.38629 1.38629
4584 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4585 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
4586 1.38629 1.38629 1.38629 1.38629
4587 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4588 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
4589 1.38629 1.38629 1.38629 1.38629
4590 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4591 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
4592 1.38629 1.38629 1.38629 1.38629
4593 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4594 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
4595 1.38629 1.38629 1.38629 1.38629
4596 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4597 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
4598 1.38629 1.38629 1.38629 1.38629
4599 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4600 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
4601 1.38629 1.38629 1.38629 1.38629
4602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4603 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
4604 1.38629 1.38629 1.38629 1.38629
4605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4606 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
4607 1.38629 1.38629 1.38629 1.38629
4608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4609 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
4610 1.38629 1.38629 1.38629 1.38629
4611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4612 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
4613 1.38629 1.38629 1.38629 1.38629
4614 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4615 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
4616 1.38629 1.38629 1.38629 1.38629
4617 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4618 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
4619 1.38629 1.38629 1.38629 1.38629
4620 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4621 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
4622 1.38629 1.38629 1.38629 1.38629
4623 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4624 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
4625 1.38629 1.38629 1.38629 1.38629
4626 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4627 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
4628 1.38629 1.38629 1.38629 1.38629
4629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4630 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
4631 1.38629 1.38629 1.38629 1.38629
4632 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4633 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
4634 1.38629 1.38629 1.38629 1.38629
4635 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4636 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
4637 1.38629 1.38629 1.38629 1.38629
4638 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4639 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
4640 1.38629 1.38629 1.38629 1.38629
4641 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4642 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
4643 1.38629 1.38629 1.38629 1.38629
4644 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4645 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
4646 1.38629 1.38629 1.38629 1.38629
4647 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4648 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
4649 1.38629 1.38629 1.38629 1.38629
4650 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4651 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
4652 1.38629 1.38629 1.38629 1.38629
4653 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4654 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
4655 1.38629 1.38629 1.38629 1.38629
4656 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4657 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
4658 1.38629 1.38629 1.38629 1.38629
4659 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4660 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
4661 1.38629 1.38629 1.38629 1.38629
4662 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4663 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
4664 1.38629 1.38629 1.38629 1.38629
4665 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4666 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
4667 1.38629 1.38629 1.38629 1.38629
4668 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4669 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
4670 1.38629 1.38629 1.38629 1.38629
4671 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4672 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
4673 1.38629 1.38629 1.38629 1.38629
4674 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4675 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
4676 1.38629 1.38629 1.38629 1.38629
4677 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4678 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
4679 1.38629 1.38629 1.38629 1.38629
4680 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4681 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
4682 1.38629 1.38629 1.38629 1.38629
4683 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4684 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
4685 1.38629 1.38629 1.38629 1.38629
4686 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4687 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
4688 1.38629 1.38629 1.38629 1.38629
4689 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4690 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
4691 1.38629 1.38629 1.38629 1.38629
4692 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4693 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
4694 1.38629 1.38629 1.38629 1.38629
4695 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4696 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
4697 1.38629 1.38629 1.38629 1.38629
4698 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4699 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
4700 1.38629 1.38629 1.38629 1.38629
4701 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4702 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
4703 1.38629 1.38629 1.38629 1.38629
4704 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4705 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
4706 1.38629 1.38629 1.38629 1.38629
4707 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4708 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
4709 1.38629 1.38629 1.38629 1.38629
4710 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4711 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
4712 1.38629 1.38629 1.38629 1.38629
4713 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4714 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
4715 1.38629 1.38629 1.38629 1.38629
4716 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4717 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
4718 1.38629 1.38629 1.38629 1.38629
4719 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4720 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
4721 1.38629 1.38629 1.38629 1.38629
4722 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4723 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
4724 1.38629 1.38629 1.38629 1.38629
4725 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4726 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
4727 1.38629 1.38629 1.38629 1.38629
4728 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4729 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
4730 1.38629 1.38629 1.38629 1.38629
4731 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4732 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
4733 1.38629 1.38629 1.38629 1.38629
4734 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4735 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
4736 1.38629 1.38629 1.38629 1.38629
4737 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4738 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
4739 1.38629 1.38629 1.38629 1.38629
4740 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4741 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
4742 1.38629 1.38629 1.38629 1.38629
4743 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4744 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
4745 1.38629 1.38629 1.38629 1.38629
4746 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4747 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
4748 1.38629 1.38629 1.38629 1.38629
4749 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4750 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
4751 1.38629 1.38629 1.38629 1.38629
4752 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4753 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
4754 1.38629 1.38629 1.38629 1.38629
4755 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4756 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
4757 1.38629 1.38629 1.38629 1.38629
4758 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4759 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
4760 1.38629 1.38629 1.38629 1.38629
4761 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4762 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
4763 1.38629 1.38629 1.38629 1.38629
4764 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4765 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
4766 1.38629 1.38629 1.38629 1.38629
4767 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4768 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
4769 1.38629 1.38629 1.38629 1.38629
4770 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4771 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
4772 1.38629 1.38629 1.38629 1.38629
4773 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4774 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
4775 1.38629 1.38629 1.38629 1.38629
4776 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4777 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
4778 1.38629 1.38629 1.38629 1.38629
4779 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
4780 //
4781 HMMER3/f [3.2.1 | June 2018]
4782 NAME long.20.aln
4783 LENG 76
4784 MAXL 168
4785 ALPH DNA
4786 RF no
4787 MM no
4788 CONS yes
4789 CS no
4790 MAP yes
4791 DATE Tue May 28 13:12:04 2019
4792 NSEQ 2
4793 EFFN 2.000000
4794 CKSUM 1469264720
4795 STATS LOCAL MSV -8.1344 0.72015
4796 STATS LOCAL VITERBI -9.5718 0.72015
4797 STATS LOCAL FORWARD -3.5802 0.72015
4798 HMM A C G T
4799 m->m m->i m->d i->m i->i d->m d->d
4800 COMPO 1.44381 1.42833 1.04375 1.75948
4801 1.38629 1.38629 1.38629 1.38629
4802 0.33647 3.73767 1.33977 1.46634 0.26236 0.00000 *
4803 1 1.97267 2.25870 0.46443 2.05625 1 g - - -
4804 1.38629 1.38629 1.38629 1.38629
4805 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
4806 2 1.97267 2.25870 0.46443 2.05625 2 g - - -
4807 1.38629 1.38629 1.38629 1.38629
4808 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
4809 3 0.56139 2.08489 1.86185 1.89791 3 a - - -
4810 1.38629 1.38629 1.38629 1.38629
4811 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
4812 4 0.56139 2.08489 1.86185 1.89791 4 a - - -
4813 1.38629 1.38629 1.38629 1.38629
4814 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
4815 5 0.56139 2.08489 1.86185 1.89791 5 a - - -
4816 1.38629 1.38629 1.38629 1.38629
4817 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
4818 6 1.98342 0.60779 2.04641 1.66785 6 c - - -
4819 1.38629 1.38629 1.38629 1.38629
4820 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
4821 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
4822 1.38629 1.38629 1.38629 1.38629
4823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4824 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
4825 1.38629 1.38629 1.38629 1.38629
4826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4827 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
4828 1.38629 1.38629 1.38629 1.38629
4829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4830 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
4831 1.38629 1.38629 1.38629 1.38629
4832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4833 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
4834 1.38629 1.38629 1.38629 1.38629
4835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4836 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
4837 1.38629 1.38629 1.38629 1.38629
4838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4839 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
4840 1.38629 1.38629 1.38629 1.38629
4841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4842 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
4843 1.38629 1.38629 1.38629 1.38629
4844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4845 15 1.88401 1.14290 1.03416 1.75097 15 g - - -
4846 1.38629 1.38629 1.38629 1.38629
4847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4848 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
4849 1.38629 1.38629 1.38629 1.38629
4850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4851 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
4852 1.38629 1.38629 1.38629 1.38629
4853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4854 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
4855 1.38629 1.38629 1.38629 1.38629
4856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4857 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
4858 1.38629 1.38629 1.38629 1.38629
4859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4860 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
4861 1.38629 1.38629 1.38629 1.38629
4862 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4863 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
4864 1.38629 1.38629 1.38629 1.38629
4865 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4866 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
4867 1.38629 1.38629 1.38629 1.38629
4868 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4869 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
4870 1.38629 1.38629 1.38629 1.38629
4871 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4872 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
4873 1.38629 1.38629 1.38629 1.38629
4874 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4875 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
4876 1.38629 1.38629 1.38629 1.38629
4877 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4878 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
4879 1.38629 1.38629 1.38629 1.38629
4880 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4881 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
4882 1.38629 1.38629 1.38629 1.38629
4883 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4884 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
4885 1.38629 1.38629 1.38629 1.38629
4886 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4887 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
4888 1.38629 1.38629 1.38629 1.38629
4889 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4890 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
4891 1.38629 1.38629 1.38629 1.38629
4892 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4893 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
4894 1.38629 1.38629 1.38629 1.38629
4895 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4896 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
4897 1.38629 1.38629 1.38629 1.38629
4898 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4899 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
4900 1.38629 1.38629 1.38629 1.38629
4901 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4902 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
4903 1.38629 1.38629 1.38629 1.38629
4904 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4905 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
4906 1.38629 1.38629 1.38629 1.38629
4907 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4908 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
4909 1.38629 1.38629 1.38629 1.38629
4910 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4911 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
4912 1.38629 1.38629 1.38629 1.38629
4913 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4914 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
4915 1.38629 1.38629 1.38629 1.38629
4916 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4917 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
4918 1.38629 1.38629 1.38629 1.38629
4919 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4920 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
4921 1.38629 1.38629 1.38629 1.38629
4922 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4923 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
4924 1.38629 1.38629 1.38629 1.38629
4925 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4926 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
4927 1.38629 1.38629 1.38629 1.38629
4928 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4929 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
4930 1.38629 1.38629 1.38629 1.38629
4931 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4932 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
4933 1.38629 1.38629 1.38629 1.38629
4934 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4935 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
4936 1.38629 1.38629 1.38629 1.38629
4937 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4938 46 1.88401 1.14290 1.03416 1.75097 46 g - - -
4939 1.38629 1.38629 1.38629 1.38629
4940 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4941 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
4942 1.38629 1.38629 1.38629 1.38629
4943 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4944 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
4945 1.38629 1.38629 1.38629 1.38629
4946 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4947 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
4948 1.38629 1.38629 1.38629 1.38629
4949 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4950 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
4951 1.38629 1.38629 1.38629 1.38629
4952 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4953 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
4954 1.38629 1.38629 1.38629 1.38629
4955 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4956 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
4957 1.38629 1.38629 1.38629 1.38629
4958 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4959 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
4960 1.38629 1.38629 1.38629 1.38629
4961 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4962 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
4963 1.38629 1.38629 1.38629 1.38629
4964 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4965 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
4966 1.38629 1.38629 1.38629 1.38629
4967 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4968 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
4969 1.38629 1.38629 1.38629 1.38629
4970 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4971 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
4972 1.38629 1.38629 1.38629 1.38629
4973 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4974 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
4975 1.38629 1.38629 1.38629 1.38629
4976 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4977 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
4978 1.38629 1.38629 1.38629 1.38629
4979 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4980 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
4981 1.38629 1.38629 1.38629 1.38629
4982 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4983 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
4984 1.38629 1.38629 1.38629 1.38629
4985 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4986 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
4987 1.38629 1.38629 1.38629 1.38629
4988 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4989 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
4990 1.38629 1.38629 1.38629 1.38629
4991 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4992 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
4993 1.38629 1.38629 1.38629 1.38629
4994 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4995 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
4996 1.38629 1.38629 1.38629 1.38629
4997 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4998 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
4999 1.38629 1.38629 1.38629 1.38629
5000 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5001 67 2.38910 2.82844 0.25233 2.62837 67 g - - -
5002 1.38629 1.38629 1.38629 1.38629
5003 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5004 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
5005 1.38629 1.38629 1.38629 1.38629
5006 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5007 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
5008 1.38629 1.38629 1.38629 1.38629
5009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5010 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
5011 1.38629 1.38629 1.38629 1.38629
5012 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
5013 71 1.97267 2.25870 0.46443 2.05625 71 g - - -
5014 1.38629 1.38629 1.38629 1.38629
5015 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
5016 72 1.98342 0.60779 2.04641 1.66785 72 c - - -
5017 1.38629 1.38629 1.38629 1.38629
5018 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
5019 73 1.97267 2.25870 0.46443 2.05625 73 g - - -
5020 1.38629 1.38629 1.38629 1.38629
5021 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
5022 74 0.56139 2.08489 1.86185 1.89791 74 a - - -
5023 1.38629 1.38629 1.38629 1.38629
5024 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
5025 75 1.98342 0.60779 2.04641 1.66785 75 c - - -
5026 1.38629 1.38629 1.38629 1.38629
5027 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
5028 76 1.91091 1.78233 1.95844 0.61114 76 t - - -
5029 1.38629 1.38629 1.38629 1.38629
5030 0.03279 3.43399 * 1.46634 0.26236 0.00000 *
5031 //
5032 HMMER3/f [3.2.1 | June 2018]
5033 NAME long.21.aln
5034 LENG 70
5035 MAXL 160
5036 ALPH DNA
5037 RF no
5038 MM no
5039 CONS yes
5040 CS no
5041 MAP yes
5042 DATE Tue May 28 13:12:04 2019
5043 NSEQ 2
5044 EFFN 2.000000
5045 CKSUM 3352386187
5046 STATS LOCAL MSV -7.8693 0.72000
5047 STATS LOCAL VITERBI -9.1844 0.72000
5048 STATS LOCAL FORWARD -3.3420 0.72000
5049 HMM A C G T
5050 m->m m->i m->d i->m i->i d->m d->d
5051 COMPO 1.25619 1.45164 1.27473 1.60162
5052 1.38629 1.38629 1.38629 1.38629
5053 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
5054 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
5055 1.38629 1.38629 1.38629 1.38629
5056 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5057 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
5058 1.38629 1.38629 1.38629 1.38629
5059 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5060 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
5061 1.38629 1.38629 1.38629 1.38629
5062 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5063 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
5064 1.38629 1.38629 1.38629 1.38629
5065 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5066 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
5067 1.38629 1.38629 1.38629 1.38629
5068 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5069 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
5070 1.38629 1.38629 1.38629 1.38629
5071 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5072 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
5073 1.38629 1.38629 1.38629 1.38629
5074 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5075 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
5076 1.38629 1.38629 1.38629 1.38629
5077 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5078 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
5079 1.38629 1.38629 1.38629 1.38629
5080 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5081 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
5082 1.38629 1.38629 1.38629 1.38629
5083 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5084 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
5085 1.38629 1.38629 1.38629 1.38629
5086 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5087 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
5088 1.38629 1.38629 1.38629 1.38629
5089 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5090 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
5091 1.38629 1.38629 1.38629 1.38629
5092 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5093 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
5094 1.38629 1.38629 1.38629 1.38629
5095 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5096 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
5097 1.38629 1.38629 1.38629 1.38629
5098 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5099 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
5100 1.38629 1.38629 1.38629 1.38629
5101 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5102 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
5103 1.38629 1.38629 1.38629 1.38629
5104 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5105 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
5106 1.38629 1.38629 1.38629 1.38629
5107 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5108 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
5109 1.38629 1.38629 1.38629 1.38629
5110 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5111 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
5112 1.38629 1.38629 1.38629 1.38629
5113 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5114 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
5115 1.38629 1.38629 1.38629 1.38629
5116 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5117 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
5118 1.38629 1.38629 1.38629 1.38629
5119 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5120 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
5121 1.38629 1.38629 1.38629 1.38629
5122 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5123 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
5124 1.38629 1.38629 1.38629 1.38629
5125 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5126 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
5127 1.38629 1.38629 1.38629 1.38629
5128 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5129 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
5130 1.38629 1.38629 1.38629 1.38629
5131 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5132 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
5133 1.38629 1.38629 1.38629 1.38629
5134 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5135 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
5136 1.38629 1.38629 1.38629 1.38629
5137 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5138 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
5139 1.38629 1.38629 1.38629 1.38629
5140 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5141 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
5142 1.38629 1.38629 1.38629 1.38629
5143 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5144 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
5145 1.38629 1.38629 1.38629 1.38629
5146 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5147 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
5148 1.38629 1.38629 1.38629 1.38629
5149 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5150 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
5151 1.38629 1.38629 1.38629 1.38629
5152 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5153 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
5154 1.38629 1.38629 1.38629 1.38629
5155 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5156 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
5157 1.38629 1.38629 1.38629 1.38629
5158 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5159 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
5160 1.38629 1.38629 1.38629 1.38629
5161 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5162 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
5163 1.38629 1.38629 1.38629 1.38629
5164 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5165 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
5166 1.38629 1.38629 1.38629 1.38629
5167 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5168 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
5169 1.38629 1.38629 1.38629 1.38629
5170 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5171 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
5172 1.38629 1.38629 1.38629 1.38629
5173 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5174 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
5175 1.38629 1.38629 1.38629 1.38629
5176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5177 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
5178 1.38629 1.38629 1.38629 1.38629
5179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5180 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
5181 1.38629 1.38629 1.38629 1.38629
5182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5183 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
5184 1.38629 1.38629 1.38629 1.38629
5185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5186 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
5187 1.38629 1.38629 1.38629 1.38629
5188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5189 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
5190 1.38629 1.38629 1.38629 1.38629
5191 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5192 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
5193 1.38629 1.38629 1.38629 1.38629
5194 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5195 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
5196 1.38629 1.38629 1.38629 1.38629
5197 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5198 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
5199 1.38629 1.38629 1.38629 1.38629
5200 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5201 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
5202 1.38629 1.38629 1.38629 1.38629
5203 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5204 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
5205 1.38629 1.38629 1.38629 1.38629
5206 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5207 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
5208 1.38629 1.38629 1.38629 1.38629
5209 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5210 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
5211 1.38629 1.38629 1.38629 1.38629
5212 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5213 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
5214 1.38629 1.38629 1.38629 1.38629
5215 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5216 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
5217 1.38629 1.38629 1.38629 1.38629
5218 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5219 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
5220 1.38629 1.38629 1.38629 1.38629
5221 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5222 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
5223 1.38629 1.38629 1.38629 1.38629
5224 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5225 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
5226 1.38629 1.38629 1.38629 1.38629
5227 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5228 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
5229 1.38629 1.38629 1.38629 1.38629
5230 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5231 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
5232 1.38629 1.38629 1.38629 1.38629
5233 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5234 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
5235 1.38629 1.38629 1.38629 1.38629
5236 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5237 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
5238 1.38629 1.38629 1.38629 1.38629
5239 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5240 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
5241 1.38629 1.38629 1.38629 1.38629
5242 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5243 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
5244 1.38629 1.38629 1.38629 1.38629
5245 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5246 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
5247 1.38629 1.38629 1.38629 1.38629
5248 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5249 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
5250 1.38629 1.38629 1.38629 1.38629
5251 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5252 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
5253 1.38629 1.38629 1.38629 1.38629
5254 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5255 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
5256 1.38629 1.38629 1.38629 1.38629
5257 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5258 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
5259 1.38629 1.38629 1.38629 1.38629
5260 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5261 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
5262 1.38629 1.38629 1.38629 1.38629
5263 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
5264 //
5265 HMMER3/f [3.2.1 | June 2018]
5266 NAME long.22.aln
5267 LENG 70
5268 MAXL 160
5269 ALPH DNA
5270 RF no
5271 MM no
5272 CONS yes
5273 CS no
5274 MAP yes
5275 DATE Tue May 28 13:12:03 2019
5276 NSEQ 2
5277 EFFN 2.000000
5278 CKSUM 3523423231
5279 STATS LOCAL MSV -7.9373 0.72115
5280 STATS LOCAL VITERBI -9.2441 0.72115
5281 STATS LOCAL FORWARD -3.3918 0.72115
5282 HMM A C G T
5283 m->m m->i m->d i->m i->i d->m d->d
5284 COMPO 1.22216 1.56504 1.56688 1.24607
5285 1.38629 1.38629 1.38629 1.38629
5286 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
5287 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
5288 1.38629 1.38629 1.38629 1.38629
5289 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5290 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
5291 1.38629 1.38629 1.38629 1.38629
5292 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5293 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
5294 1.38629 1.38629 1.38629 1.38629
5295 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5296 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
5297 1.38629 1.38629 1.38629 1.38629
5298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5299 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
5300 1.38629 1.38629 1.38629 1.38629
5301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5302 6 2.46232 0.33808 2.58153 2.07174 6 c - - -
5303 1.38629 1.38629 1.38629 1.38629
5304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5305 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
5306 1.38629 1.38629 1.38629 1.38629
5307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5308 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
5309 1.38629 1.38629 1.38629 1.38629
5310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5311 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
5312 1.38629 1.38629 1.38629 1.38629
5313 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5314 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
5315 1.38629 1.38629 1.38629 1.38629
5316 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5317 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
5318 1.38629 1.38629 1.38629 1.38629
5319 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5320 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
5321 1.38629 1.38629 1.38629 1.38629
5322 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5323 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
5324 1.38629 1.38629 1.38629 1.38629
5325 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5326 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
5327 1.38629 1.38629 1.38629 1.38629
5328 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5329 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
5330 1.38629 1.38629 1.38629 1.38629
5331 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5332 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
5333 1.38629 1.38629 1.38629 1.38629
5334 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5335 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
5336 1.38629 1.38629 1.38629 1.38629
5337 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5338 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
5339 1.38629 1.38629 1.38629 1.38629
5340 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5341 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
5342 1.38629 1.38629 1.38629 1.38629
5343 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5344 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
5345 1.38629 1.38629 1.38629 1.38629
5346 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5347 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
5348 1.38629 1.38629 1.38629 1.38629
5349 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5350 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
5351 1.38629 1.38629 1.38629 1.38629
5352 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5353 23 2.38910 2.82844 0.25233 2.62837 23 g - - -
5354 1.38629 1.38629 1.38629 1.38629
5355 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5356 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
5357 1.38629 1.38629 1.38629 1.38629
5358 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5359 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
5360 1.38629 1.38629 1.38629 1.38629
5361 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5362 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
5363 1.38629 1.38629 1.38629 1.38629
5364 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5365 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
5366 1.38629 1.38629 1.38629 1.38629
5367 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5368 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
5369 1.38629 1.38629 1.38629 1.38629
5370 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5371 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
5372 1.38629 1.38629 1.38629 1.38629
5373 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5374 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
5375 1.38629 1.38629 1.38629 1.38629
5376 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5377 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
5378 1.38629 1.38629 1.38629 1.38629
5379 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5380 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
5381 1.38629 1.38629 1.38629 1.38629
5382 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5383 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
5384 1.38629 1.38629 1.38629 1.38629
5385 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5386 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
5387 1.38629 1.38629 1.38629 1.38629
5388 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5389 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
5390 1.38629 1.38629 1.38629 1.38629
5391 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5392 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
5393 1.38629 1.38629 1.38629 1.38629
5394 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5395 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
5396 1.38629 1.38629 1.38629 1.38629
5397 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5398 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
5399 1.38629 1.38629 1.38629 1.38629
5400 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5401 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
5402 1.38629 1.38629 1.38629 1.38629
5403 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5404 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
5405 1.38629 1.38629 1.38629 1.38629
5406 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5407 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
5408 1.38629 1.38629 1.38629 1.38629
5409 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5410 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
5411 1.38629 1.38629 1.38629 1.38629
5412 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5413 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
5414 1.38629 1.38629 1.38629 1.38629
5415 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5416 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
5417 1.38629 1.38629 1.38629 1.38629
5418 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5419 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
5420 1.38629 1.38629 1.38629 1.38629
5421 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5422 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
5423 1.38629 1.38629 1.38629 1.38629
5424 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5425 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
5426 1.38629 1.38629 1.38629 1.38629
5427 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5428 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
5429 1.38629 1.38629 1.38629 1.38629
5430 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5431 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
5432 1.38629 1.38629 1.38629 1.38629
5433 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5434 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
5435 1.38629 1.38629 1.38629 1.38629
5436 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5437 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
5438 1.38629 1.38629 1.38629 1.38629
5439 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5440 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
5441 1.38629 1.38629 1.38629 1.38629
5442 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5443 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
5444 1.38629 1.38629 1.38629 1.38629
5445 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5446 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
5447 1.38629 1.38629 1.38629 1.38629
5448 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5449 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
5450 1.38629 1.38629 1.38629 1.38629
5451 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5452 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
5453 1.38629 1.38629 1.38629 1.38629
5454 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5455 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
5456 1.38629 1.38629 1.38629 1.38629
5457 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5458 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
5459 1.38629 1.38629 1.38629 1.38629
5460 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5461 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
5462 1.38629 1.38629 1.38629 1.38629
5463 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5464 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
5465 1.38629 1.38629 1.38629 1.38629
5466 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5467 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
5468 1.38629 1.38629 1.38629 1.38629
5469 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5470 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
5471 1.38629 1.38629 1.38629 1.38629
5472 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5473 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
5474 1.38629 1.38629 1.38629 1.38629
5475 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5476 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
5477 1.38629 1.38629 1.38629 1.38629
5478 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5479 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
5480 1.38629 1.38629 1.38629 1.38629
5481 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5482 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
5483 1.38629 1.38629 1.38629 1.38629
5484 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5485 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
5486 1.38629 1.38629 1.38629 1.38629
5487 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5488 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
5489 1.38629 1.38629 1.38629 1.38629
5490 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5491 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
5492 1.38629 1.38629 1.38629 1.38629
5493 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5494 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
5495 1.38629 1.38629 1.38629 1.38629
5496 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
5497 //
5498 HMMER3/f [3.2.1 | June 2018]
5499 NAME long.23.aln
5500 LENG 70
5501 MAXL 160
5502 ALPH DNA
5503 RF no
5504 MM no
5505 CONS yes
5506 CS no
5507 MAP yes
5508 DATE Tue May 28 13:12:04 2019
5509 NSEQ 2
5510 EFFN 2.000000
5511 CKSUM 3211019947
5512 STATS LOCAL MSV -7.9072 0.72056
5513 STATS LOCAL VITERBI -9.2220 0.72056
5514 STATS LOCAL FORWARD -3.4510 0.72056
5515 HMM A C G T
5516 m->m m->i m->d i->m i->i d->m d->d
5517 COMPO 1.08931 1.43968 1.56997 1.52098
5518 1.38629 1.38629 1.38629 1.38629
5519 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
5520 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
5521 1.38629 1.38629 1.38629 1.38629
5522 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5523 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
5524 1.38629 1.38629 1.38629 1.38629
5525 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5526 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
5527 1.38629 1.38629 1.38629 1.38629
5528 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5529 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
5530 1.38629 1.38629 1.38629 1.38629
5531 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5532 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
5533 1.38629 1.38629 1.38629 1.38629
5534 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5535 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
5536 1.38629 1.38629 1.38629 1.38629
5537 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5538 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
5539 1.38629 1.38629 1.38629 1.38629
5540 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5541 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
5542 1.38629 1.38629 1.38629 1.38629
5543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5544 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
5545 1.38629 1.38629 1.38629 1.38629
5546 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5547 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
5548 1.38629 1.38629 1.38629 1.38629
5549 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5550 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
5551 1.38629 1.38629 1.38629 1.38629
5552 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5553 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
5554 1.38629 1.38629 1.38629 1.38629
5555 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5556 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
5557 1.38629 1.38629 1.38629 1.38629
5558 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5559 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
5560 1.38629 1.38629 1.38629 1.38629
5561 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5562 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
5563 1.38629 1.38629 1.38629 1.38629
5564 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5565 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
5566 1.38629 1.38629 1.38629 1.38629
5567 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5568 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
5569 1.38629 1.38629 1.38629 1.38629
5570 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5571 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
5572 1.38629 1.38629 1.38629 1.38629
5573 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5574 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
5575 1.38629 1.38629 1.38629 1.38629
5576 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5577 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
5578 1.38629 1.38629 1.38629 1.38629
5579 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5580 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
5581 1.38629 1.38629 1.38629 1.38629
5582 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5583 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
5584 1.38629 1.38629 1.38629 1.38629
5585 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5586 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
5587 1.38629 1.38629 1.38629 1.38629
5588 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5589 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
5590 1.38629 1.38629 1.38629 1.38629
5591 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5592 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
5593 1.38629 1.38629 1.38629 1.38629
5594 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5595 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
5596 1.38629 1.38629 1.38629 1.38629
5597 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5598 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
5599 1.38629 1.38629 1.38629 1.38629
5600 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5601 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
5602 1.38629 1.38629 1.38629 1.38629
5603 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5604 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
5605 1.38629 1.38629 1.38629 1.38629
5606 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5607 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
5608 1.38629 1.38629 1.38629 1.38629
5609 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5610 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
5611 1.38629 1.38629 1.38629 1.38629
5612 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5613 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
5614 1.38629 1.38629 1.38629 1.38629
5615 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5616 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
5617 1.38629 1.38629 1.38629 1.38629
5618 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5619 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
5620 1.38629 1.38629 1.38629 1.38629
5621 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5622 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
5623 1.38629 1.38629 1.38629 1.38629
5624 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5625 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
5626 1.38629 1.38629 1.38629 1.38629
5627 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5628 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
5629 1.38629 1.38629 1.38629 1.38629
5630 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5631 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
5632 1.38629 1.38629 1.38629 1.38629
5633 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5634 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
5635 1.38629 1.38629 1.38629 1.38629
5636 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5637 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
5638 1.38629 1.38629 1.38629 1.38629
5639 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5640 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
5641 1.38629 1.38629 1.38629 1.38629
5642 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5643 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
5644 1.38629 1.38629 1.38629 1.38629
5645 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5646 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
5647 1.38629 1.38629 1.38629 1.38629
5648 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5649 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
5650 1.38629 1.38629 1.38629 1.38629
5651 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5652 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
5653 1.38629 1.38629 1.38629 1.38629
5654 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5655 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
5656 1.38629 1.38629 1.38629 1.38629
5657 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5658 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
5659 1.38629 1.38629 1.38629 1.38629
5660 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5661 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
5662 1.38629 1.38629 1.38629 1.38629
5663 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5664 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
5665 1.38629 1.38629 1.38629 1.38629
5666 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5667 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
5668 1.38629 1.38629 1.38629 1.38629
5669 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5670 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
5671 1.38629 1.38629 1.38629 1.38629
5672 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5673 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
5674 1.38629 1.38629 1.38629 1.38629
5675 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5676 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
5677 1.38629 1.38629 1.38629 1.38629
5678 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5679 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
5680 1.38629 1.38629 1.38629 1.38629
5681 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5682 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
5683 1.38629 1.38629 1.38629 1.38629
5684 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5685 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
5686 1.38629 1.38629 1.38629 1.38629
5687 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5688 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
5689 1.38629 1.38629 1.38629 1.38629
5690 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5691 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
5692 1.38629 1.38629 1.38629 1.38629
5693 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5694 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
5695 1.38629 1.38629 1.38629 1.38629
5696 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5697 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
5698 1.38629 1.38629 1.38629 1.38629
5699 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5700 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
5701 1.38629 1.38629 1.38629 1.38629
5702 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5703 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
5704 1.38629 1.38629 1.38629 1.38629
5705 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5706 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
5707 1.38629 1.38629 1.38629 1.38629
5708 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5709 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
5710 1.38629 1.38629 1.38629 1.38629
5711 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5712 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
5713 1.38629 1.38629 1.38629 1.38629
5714 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5715 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
5716 1.38629 1.38629 1.38629 1.38629
5717 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5718 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
5719 1.38629 1.38629 1.38629 1.38629
5720 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5721 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
5722 1.38629 1.38629 1.38629 1.38629
5723 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5724 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
5725 1.38629 1.38629 1.38629 1.38629
5726 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5727 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
5728 1.38629 1.38629 1.38629 1.38629
5729 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
5730 //
5731 HMMER3/f [3.2.1 | June 2018]
5732 NAME long.24.aln
5733 LENG 70
5734 MAXL 160
5735 ALPH DNA
5736 RF no
5737 MM no
5738 CONS yes
5739 CS no
5740 MAP yes
5741 DATE Tue May 28 13:12:04 2019
5742 NSEQ 2
5743 EFFN 2.000000
5744 CKSUM 4215457382
5745 STATS LOCAL MSV -7.8763 0.71945
5746 STATS LOCAL VITERBI -9.4044 0.71945
5747 STATS LOCAL FORWARD -3.0104 0.71945
5748 HMM A C G T
5749 m->m m->i m->d i->m i->i d->m d->d
5750 COMPO 0.92744 1.79235 1.33354 1.74684
5751 1.38629 1.38629 1.38629 1.38629
5752 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
5753 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
5754 1.38629 1.38629 1.38629 1.38629
5755 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5756 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
5757 1.38629 1.38629 1.38629 1.38629
5758 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5759 3 2.38910 2.82844 0.25233 2.62837 3 g - - -
5760 1.38629 1.38629 1.38629 1.38629
5761 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5762 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
5763 1.38629 1.38629 1.38629 1.38629
5764 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5765 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
5766 1.38629 1.38629 1.38629 1.38629
5767 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5768 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
5769 1.38629 1.38629 1.38629 1.38629
5770 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5771 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
5772 1.38629 1.38629 1.38629 1.38629
5773 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5774 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
5775 1.38629 1.38629 1.38629 1.38629
5776 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5777 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
5778 1.38629 1.38629 1.38629 1.38629
5779 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5780 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
5781 1.38629 1.38629 1.38629 1.38629
5782 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5783 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
5784 1.38629 1.38629 1.38629 1.38629
5785 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5786 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
5787 1.38629 1.38629 1.38629 1.38629
5788 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5789 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
5790 1.38629 1.38629 1.38629 1.38629
5791 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5792 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
5793 1.38629 1.38629 1.38629 1.38629
5794 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5795 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
5796 1.38629 1.38629 1.38629 1.38629
5797 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5798 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
5799 1.38629 1.38629 1.38629 1.38629
5800 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5801 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
5802 1.38629 1.38629 1.38629 1.38629
5803 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5804 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
5805 1.38629 1.38629 1.38629 1.38629
5806 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5807 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
5808 1.38629 1.38629 1.38629 1.38629
5809 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5810 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
5811 1.38629 1.38629 1.38629 1.38629
5812 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5813 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
5814 1.38629 1.38629 1.38629 1.38629
5815 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5816 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
5817 1.38629 1.38629 1.38629 1.38629
5818 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5819 23 2.38910 2.82844 0.25233 2.62837 23 g - - -
5820 1.38629 1.38629 1.38629 1.38629
5821 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5822 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
5823 1.38629 1.38629 1.38629 1.38629
5824 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5825 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
5826 1.38629 1.38629 1.38629 1.38629
5827 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5828 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
5829 1.38629 1.38629 1.38629 1.38629
5830 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5831 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
5832 1.38629 1.38629 1.38629 1.38629
5833 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5834 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
5835 1.38629 1.38629 1.38629 1.38629
5836 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5837 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
5838 1.38629 1.38629 1.38629 1.38629
5839 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5840 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
5841 1.38629 1.38629 1.38629 1.38629
5842 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5843 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
5844 1.38629 1.38629 1.38629 1.38629
5845 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5846 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
5847 1.38629 1.38629 1.38629 1.38629
5848 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5849 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
5850 1.38629 1.38629 1.38629 1.38629
5851 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5852 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
5853 1.38629 1.38629 1.38629 1.38629
5854 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5855 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
5856 1.38629 1.38629 1.38629 1.38629
5857 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5858 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
5859 1.38629 1.38629 1.38629 1.38629
5860 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5861 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
5862 1.38629 1.38629 1.38629 1.38629
5863 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5864 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
5865 1.38629 1.38629 1.38629 1.38629
5866 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5867 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
5868 1.38629 1.38629 1.38629 1.38629
5869 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5870 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
5871 1.38629 1.38629 1.38629 1.38629
5872 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5873 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
5874 1.38629 1.38629 1.38629 1.38629
5875 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5876 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
5877 1.38629 1.38629 1.38629 1.38629
5878 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5879 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
5880 1.38629 1.38629 1.38629 1.38629
5881 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5882 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
5883 1.38629 1.38629 1.38629 1.38629
5884 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5885 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
5886 1.38629 1.38629 1.38629 1.38629
5887 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5888 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
5889 1.38629 1.38629 1.38629 1.38629
5890 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5891 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
5892 1.38629 1.38629 1.38629 1.38629
5893 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5894 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
5895 1.38629 1.38629 1.38629 1.38629
5896 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5897 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
5898 1.38629 1.38629 1.38629 1.38629
5899 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5900 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
5901 1.38629 1.38629 1.38629 1.38629
5902 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5903 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
5904 1.38629 1.38629 1.38629 1.38629
5905 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5906 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
5907 1.38629 1.38629 1.38629 1.38629
5908 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5909 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
5910 1.38629 1.38629 1.38629 1.38629
5911 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5912 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
5913 1.38629 1.38629 1.38629 1.38629
5914 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5915 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
5916 1.38629 1.38629 1.38629 1.38629
5917 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5918 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
5919 1.38629 1.38629 1.38629 1.38629
5920 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5921 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
5922 1.38629 1.38629 1.38629 1.38629
5923 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5924 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
5925 1.38629 1.38629 1.38629 1.38629
5926 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5927 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
5928 1.38629 1.38629 1.38629 1.38629
5929 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5930 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
5931 1.38629 1.38629 1.38629 1.38629
5932 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5933 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
5934 1.38629 1.38629 1.38629 1.38629
5935 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5936 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
5937 1.38629 1.38629 1.38629 1.38629
5938 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5939 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
5940 1.38629 1.38629 1.38629 1.38629
5941 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5942 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
5943 1.38629 1.38629 1.38629 1.38629
5944 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5945 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
5946 1.38629 1.38629 1.38629 1.38629
5947 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5948 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
5949 1.38629 1.38629 1.38629 1.38629
5950 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5951 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
5952 1.38629 1.38629 1.38629 1.38629
5953 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5954 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
5955 1.38629 1.38629 1.38629 1.38629
5956 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5957 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
5958 1.38629 1.38629 1.38629 1.38629
5959 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5960 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
5961 1.38629 1.38629 1.38629 1.38629
5962 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
5963 //
5964 HMMER3/f [3.2.1 | June 2018]
5965 NAME long.25.aln
5966 LENG 70
5967 MAXL 160
5968 ALPH DNA
5969 RF no
5970 MM no
5971 CONS yes
5972 CS no
5973 MAP yes
5974 DATE Tue May 28 13:12:04 2019
5975 NSEQ 2
5976 EFFN 2.000000
5977 CKSUM 648747008
5978 STATS LOCAL MSV -8.0253 0.72144
5979 STATS LOCAL VITERBI -9.3054 0.72144
5980 STATS LOCAL FORWARD -3.5454 0.72144
5981 HMM A C G T
5982 m->m m->i m->d i->m i->i d->m d->d
5983 COMPO 1.34693 1.35348 1.61412 1.26387
5984 1.38629 1.38629 1.38629 1.38629
5985 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
5986 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
5987 1.38629 1.38629 1.38629 1.38629
5988 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5989 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
5990 1.38629 1.38629 1.38629 1.38629
5991 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5992 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
5993 1.38629 1.38629 1.38629 1.38629
5994 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5995 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
5996 1.38629 1.38629 1.38629 1.38629
5997 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5998 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
5999 1.38629 1.38629 1.38629 1.38629
6000 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6001 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
6002 1.38629 1.38629 1.38629 1.38629
6003 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6004 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
6005 1.38629 1.38629 1.38629 1.38629
6006 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6007 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
6008 1.38629 1.38629 1.38629 1.38629
6009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6010 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
6011 1.38629 1.38629 1.38629 1.38629
6012 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6013 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
6014 1.38629 1.38629 1.38629 1.38629
6015 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6016 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
6017 1.38629 1.38629 1.38629 1.38629
6018 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6019 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
6020 1.38629 1.38629 1.38629 1.38629
6021 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6022 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
6023 1.38629 1.38629 1.38629 1.38629
6024 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6025 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
6026 1.38629 1.38629 1.38629 1.38629
6027 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6028 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
6029 1.38629 1.38629 1.38629 1.38629
6030 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6031 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
6032 1.38629 1.38629 1.38629 1.38629
6033 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6034 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
6035 1.38629 1.38629 1.38629 1.38629
6036 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6037 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
6038 1.38629 1.38629 1.38629 1.38629
6039 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6040 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
6041 1.38629 1.38629 1.38629 1.38629
6042 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6043 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
6044 1.38629 1.38629 1.38629 1.38629
6045 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6046 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
6047 1.38629 1.38629 1.38629 1.38629
6048 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6049 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
6050 1.38629 1.38629 1.38629 1.38629
6051 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6052 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
6053 1.38629 1.38629 1.38629 1.38629
6054 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6055 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
6056 1.38629 1.38629 1.38629 1.38629
6057 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6058 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
6059 1.38629 1.38629 1.38629 1.38629
6060 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6061 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
6062 1.38629 1.38629 1.38629 1.38629
6063 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6064 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
6065 1.38629 1.38629 1.38629 1.38629
6066 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6067 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
6068 1.38629 1.38629 1.38629 1.38629
6069 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6070 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
6071 1.38629 1.38629 1.38629 1.38629
6072 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6073 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
6074 1.38629 1.38629 1.38629 1.38629
6075 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6076 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
6077 1.38629 1.38629 1.38629 1.38629
6078 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6079 32 2.38910 2.82844 0.25233 2.62837 32 g - - -
6080 1.38629 1.38629 1.38629 1.38629
6081 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6082 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
6083 1.38629 1.38629 1.38629 1.38629
6084 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6085 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
6086 1.38629 1.38629 1.38629 1.38629
6087 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6088 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
6089 1.38629 1.38629 1.38629 1.38629
6090 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6091 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
6092 1.38629 1.38629 1.38629 1.38629
6093 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6094 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
6095 1.38629 1.38629 1.38629 1.38629
6096 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6097 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
6098 1.38629 1.38629 1.38629 1.38629
6099 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6100 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
6101 1.38629 1.38629 1.38629 1.38629
6102 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6103 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
6104 1.38629 1.38629 1.38629 1.38629
6105 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6106 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
6107 1.38629 1.38629 1.38629 1.38629
6108 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6109 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
6110 1.38629 1.38629 1.38629 1.38629
6111 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6112 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
6113 1.38629 1.38629 1.38629 1.38629
6114 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6115 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
6116 1.38629 1.38629 1.38629 1.38629
6117 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6118 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
6119 1.38629 1.38629 1.38629 1.38629
6120 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6121 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
6122 1.38629 1.38629 1.38629 1.38629
6123 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6124 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
6125 1.38629 1.38629 1.38629 1.38629
6126 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6127 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
6128 1.38629 1.38629 1.38629 1.38629
6129 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6130 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
6131 1.38629 1.38629 1.38629 1.38629
6132 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6133 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
6134 1.38629 1.38629 1.38629 1.38629
6135 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6136 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
6137 1.38629 1.38629 1.38629 1.38629
6138 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6139 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
6140 1.38629 1.38629 1.38629 1.38629
6141 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6142 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
6143 1.38629 1.38629 1.38629 1.38629
6144 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6145 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
6146 1.38629 1.38629 1.38629 1.38629
6147 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6148 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
6149 1.38629 1.38629 1.38629 1.38629
6150 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6151 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
6152 1.38629 1.38629 1.38629 1.38629
6153 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6154 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
6155 1.38629 1.38629 1.38629 1.38629
6156 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6157 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
6158 1.38629 1.38629 1.38629 1.38629
6159 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6160 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
6161 1.38629 1.38629 1.38629 1.38629
6162 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6163 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
6164 1.38629 1.38629 1.38629 1.38629
6165 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6166 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
6167 1.38629 1.38629 1.38629 1.38629
6168 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6169 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
6170 1.38629 1.38629 1.38629 1.38629
6171 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6172 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
6173 1.38629 1.38629 1.38629 1.38629
6174 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6175 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
6176 1.38629 1.38629 1.38629 1.38629
6177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6178 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
6179 1.38629 1.38629 1.38629 1.38629
6180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6181 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
6182 1.38629 1.38629 1.38629 1.38629
6183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6184 67 2.38910 2.82844 0.25233 2.62837 67 g - - -
6185 1.38629 1.38629 1.38629 1.38629
6186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6187 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
6188 1.38629 1.38629 1.38629 1.38629
6189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6190 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
6191 1.38629 1.38629 1.38629 1.38629
6192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6193 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
6194 1.38629 1.38629 1.38629 1.38629
6195 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
6196 //
6197 HMMER3/f [3.2.1 | June 2018]
6198 NAME long.26.aln
6199 LENG 70
6200 MAXL 160
6201 ALPH DNA
6202 RF no
6203 MM no
6204 CONS yes
6205 CS no
6206 MAP yes
6207 DATE Tue May 28 13:12:03 2019
6208 NSEQ 2
6209 EFFN 2.000000
6210 CKSUM 497189614
6211 STATS LOCAL MSV -7.8241 0.72101
6212 STATS LOCAL VITERBI -9.1905 0.72101
6213 STATS LOCAL FORWARD -3.6608 0.72101
6214 HMM A C G T
6215 m->m m->i m->d i->m i->i d->m d->d
6216 COMPO 1.28628 1.27547 1.57145 1.44114
6217 1.38629 1.38629 1.38629 1.38629
6218 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
6219 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
6220 1.38629 1.38629 1.38629 1.38629
6221 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6222 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
6223 1.38629 1.38629 1.38629 1.38629
6224 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6225 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
6226 1.38629 1.38629 1.38629 1.38629
6227 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6228 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
6229 1.38629 1.38629 1.38629 1.38629
6230 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6231 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
6232 1.38629 1.38629 1.38629 1.38629
6233 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6234 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
6235 1.38629 1.38629 1.38629 1.38629
6236 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6237 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
6238 1.38629 1.38629 1.38629 1.38629
6239 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6240 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
6241 1.38629 1.38629 1.38629 1.38629
6242 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6243 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
6244 1.38629 1.38629 1.38629 1.38629
6245 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6246 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
6247 1.38629 1.38629 1.38629 1.38629
6248 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6249 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
6250 1.38629 1.38629 1.38629 1.38629
6251 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6252 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
6253 1.38629 1.38629 1.38629 1.38629
6254 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6255 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
6256 1.38629 1.38629 1.38629 1.38629
6257 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6258 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
6259 1.38629 1.38629 1.38629 1.38629
6260 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6261 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
6262 1.38629 1.38629 1.38629 1.38629
6263 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6264 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
6265 1.38629 1.38629 1.38629 1.38629
6266 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6267 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
6268 1.38629 1.38629 1.38629 1.38629
6269 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6270 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
6271 1.38629 1.38629 1.38629 1.38629
6272 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6273 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
6274 1.38629 1.38629 1.38629 1.38629
6275 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6276 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
6277 1.38629 1.38629 1.38629 1.38629
6278 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6279 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
6280 1.38629 1.38629 1.38629 1.38629
6281 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6282 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
6283 1.38629 1.38629 1.38629 1.38629
6284 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6285 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
6286 1.38629 1.38629 1.38629 1.38629
6287 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6288 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
6289 1.38629 1.38629 1.38629 1.38629
6290 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6291 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
6292 1.38629 1.38629 1.38629 1.38629
6293 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6294 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
6295 1.38629 1.38629 1.38629 1.38629
6296 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6297 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
6298 1.38629 1.38629 1.38629 1.38629
6299 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6300 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
6301 1.38629 1.38629 1.38629 1.38629
6302 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6303 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
6304 1.38629 1.38629 1.38629 1.38629
6305 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6306 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
6307 1.38629 1.38629 1.38629 1.38629
6308 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6309 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
6310 1.38629 1.38629 1.38629 1.38629
6311 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6312 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
6313 1.38629 1.38629 1.38629 1.38629
6314 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6315 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
6316 1.38629 1.38629 1.38629 1.38629
6317 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6318 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
6319 1.38629 1.38629 1.38629 1.38629
6320 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6321 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
6322 1.38629 1.38629 1.38629 1.38629
6323 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6324 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
6325 1.38629 1.38629 1.38629 1.38629
6326 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6327 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
6328 1.38629 1.38629 1.38629 1.38629
6329 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6330 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
6331 1.38629 1.38629 1.38629 1.38629
6332 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6333 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
6334 1.38629 1.38629 1.38629 1.38629
6335 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6336 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
6337 1.38629 1.38629 1.38629 1.38629
6338 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6339 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
6340 1.38629 1.38629 1.38629 1.38629
6341 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6342 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
6343 1.38629 1.38629 1.38629 1.38629
6344 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6345 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
6346 1.38629 1.38629 1.38629 1.38629
6347 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6348 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
6349 1.38629 1.38629 1.38629 1.38629
6350 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6351 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
6352 1.38629 1.38629 1.38629 1.38629
6353 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6354 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
6355 1.38629 1.38629 1.38629 1.38629
6356 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6357 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
6358 1.38629 1.38629 1.38629 1.38629
6359 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6360 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
6361 1.38629 1.38629 1.38629 1.38629
6362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6363 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
6364 1.38629 1.38629 1.38629 1.38629
6365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6366 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
6367 1.38629 1.38629 1.38629 1.38629
6368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6369 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
6370 1.38629 1.38629 1.38629 1.38629
6371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6372 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
6373 1.38629 1.38629 1.38629 1.38629
6374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6375 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
6376 1.38629 1.38629 1.38629 1.38629
6377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6378 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
6379 1.38629 1.38629 1.38629 1.38629
6380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6381 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
6382 1.38629 1.38629 1.38629 1.38629
6383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6384 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
6385 1.38629 1.38629 1.38629 1.38629
6386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6387 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
6388 1.38629 1.38629 1.38629 1.38629
6389 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6390 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
6391 1.38629 1.38629 1.38629 1.38629
6392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6393 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
6394 1.38629 1.38629 1.38629 1.38629
6395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6396 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
6397 1.38629 1.38629 1.38629 1.38629
6398 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6399 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
6400 1.38629 1.38629 1.38629 1.38629
6401 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6402 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
6403 1.38629 1.38629 1.38629 1.38629
6404 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6405 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
6406 1.38629 1.38629 1.38629 1.38629
6407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6408 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
6409 1.38629 1.38629 1.38629 1.38629
6410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6411 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
6412 1.38629 1.38629 1.38629 1.38629
6413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6414 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
6415 1.38629 1.38629 1.38629 1.38629
6416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6417 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
6418 1.38629 1.38629 1.38629 1.38629
6419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6420 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
6421 1.38629 1.38629 1.38629 1.38629
6422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6423 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
6424 1.38629 1.38629 1.38629 1.38629
6425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6426 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
6427 1.38629 1.38629 1.38629 1.38629
6428 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
6429 //
6430 HMMER3/f [3.2.1 | June 2018]
6431 NAME long.27.aln
6432 LENG 70
6433 MAXL 160
6434 ALPH DNA
6435 RF no
6436 MM no
6437 CONS yes
6438 CS no
6439 MAP yes
6440 DATE Tue May 28 13:12:03 2019
6441 NSEQ 2
6442 EFFN 2.000000
6443 CKSUM 3001191573
6444 STATS LOCAL MSV -8.4593 0.72188
6445 STATS LOCAL VITERBI -9.4223 0.72188
6446 STATS LOCAL FORWARD -3.4981 0.72188
6447 HMM A C G T
6448 m->m m->i m->d i->m i->i d->m d->d
6449 COMPO 1.51776 1.58057 1.52260 1.03059
6450 1.38629 1.38629 1.38629 1.38629
6451 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
6452 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
6453 1.38629 1.38629 1.38629 1.38629
6454 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6455 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
6456 1.38629 1.38629 1.38629 1.38629
6457 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6458 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
6459 1.38629 1.38629 1.38629 1.38629
6460 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6461 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
6462 1.38629 1.38629 1.38629 1.38629
6463 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6464 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
6465 1.38629 1.38629 1.38629 1.38629
6466 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6467 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
6468 1.38629 1.38629 1.38629 1.38629
6469 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6470 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
6471 1.38629 1.38629 1.38629 1.38629
6472 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6473 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
6474 1.38629 1.38629 1.38629 1.38629
6475 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6476 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
6477 1.38629 1.38629 1.38629 1.38629
6478 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6479 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
6480 1.38629 1.38629 1.38629 1.38629
6481 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6482 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
6483 1.38629 1.38629 1.38629 1.38629
6484 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6485 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
6486 1.38629 1.38629 1.38629 1.38629
6487 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6488 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
6489 1.38629 1.38629 1.38629 1.38629
6490 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6491 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
6492 1.38629 1.38629 1.38629 1.38629
6493 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6494 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
6495 1.38629 1.38629 1.38629 1.38629
6496 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6497 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
6498 1.38629 1.38629 1.38629 1.38629
6499 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6500 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
6501 1.38629 1.38629 1.38629 1.38629
6502 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6503 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
6504 1.38629 1.38629 1.38629 1.38629
6505 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6506 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
6507 1.38629 1.38629 1.38629 1.38629
6508 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6509 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
6510 1.38629 1.38629 1.38629 1.38629
6511 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6512 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
6513 1.38629 1.38629 1.38629 1.38629
6514 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6515 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
6516 1.38629 1.38629 1.38629 1.38629
6517 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6518 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
6519 1.38629 1.38629 1.38629 1.38629
6520 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6521 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
6522 1.38629 1.38629 1.38629 1.38629
6523 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6524 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
6525 1.38629 1.38629 1.38629 1.38629
6526 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6527 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
6528 1.38629 1.38629 1.38629 1.38629
6529 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6530 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
6531 1.38629 1.38629 1.38629 1.38629
6532 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6533 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
6534 1.38629 1.38629 1.38629 1.38629
6535 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6536 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
6537 1.38629 1.38629 1.38629 1.38629
6538 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6539 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
6540 1.38629 1.38629 1.38629 1.38629
6541 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6542 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
6543 1.38629 1.38629 1.38629 1.38629
6544 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6545 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
6546 1.38629 1.38629 1.38629 1.38629
6547 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6548 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
6549 1.38629 1.38629 1.38629 1.38629
6550 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6551 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
6552 1.38629 1.38629 1.38629 1.38629
6553 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6554 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
6555 1.38629 1.38629 1.38629 1.38629
6556 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6557 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
6558 1.38629 1.38629 1.38629 1.38629
6559 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6560 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
6561 1.38629 1.38629 1.38629 1.38629
6562 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6563 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
6564 1.38629 1.38629 1.38629 1.38629
6565 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6566 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
6567 1.38629 1.38629 1.38629 1.38629
6568 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6569 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
6570 1.38629 1.38629 1.38629 1.38629
6571 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6572 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
6573 1.38629 1.38629 1.38629 1.38629
6574 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6575 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
6576 1.38629 1.38629 1.38629 1.38629
6577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6578 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
6579 1.38629 1.38629 1.38629 1.38629
6580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6581 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
6582 1.38629 1.38629 1.38629 1.38629
6583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6584 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
6585 1.38629 1.38629 1.38629 1.38629
6586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6587 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
6588 1.38629 1.38629 1.38629 1.38629
6589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6590 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
6591 1.38629 1.38629 1.38629 1.38629
6592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6593 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
6594 1.38629 1.38629 1.38629 1.38629
6595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6596 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
6597 1.38629 1.38629 1.38629 1.38629
6598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6599 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
6600 1.38629 1.38629 1.38629 1.38629
6601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6602 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
6603 1.38629 1.38629 1.38629 1.38629
6604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6605 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
6606 1.38629 1.38629 1.38629 1.38629
6607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6608 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
6609 1.38629 1.38629 1.38629 1.38629
6610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6611 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
6612 1.38629 1.38629 1.38629 1.38629
6613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6614 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
6615 1.38629 1.38629 1.38629 1.38629
6616 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6617 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
6618 1.38629 1.38629 1.38629 1.38629
6619 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6620 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
6621 1.38629 1.38629 1.38629 1.38629
6622 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6623 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
6624 1.38629 1.38629 1.38629 1.38629
6625 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6626 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
6627 1.38629 1.38629 1.38629 1.38629
6628 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6629 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
6630 1.38629 1.38629 1.38629 1.38629
6631 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6632 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
6633 1.38629 1.38629 1.38629 1.38629
6634 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6635 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
6636 1.38629 1.38629 1.38629 1.38629
6637 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6638 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
6639 1.38629 1.38629 1.38629 1.38629
6640 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6641 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
6642 1.38629 1.38629 1.38629 1.38629
6643 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6644 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
6645 1.38629 1.38629 1.38629 1.38629
6646 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6647 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
6648 1.38629 1.38629 1.38629 1.38629
6649 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6650 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
6651 1.38629 1.38629 1.38629 1.38629
6652 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6653 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
6654 1.38629 1.38629 1.38629 1.38629
6655 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6656 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
6657 1.38629 1.38629 1.38629 1.38629
6658 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6659 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
6660 1.38629 1.38629 1.38629 1.38629
6661 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
6662 //
6663 HMMER3/f [3.2.1 | June 2018]
6664 NAME long.28.aln
6665 LENG 70
6666 MAXL 160
6667 ALPH DNA
6668 RF no
6669 MM no
6670 CONS yes
6671 CS no
6672 MAP yes
6673 DATE Tue May 28 13:12:03 2019
6674 NSEQ 2
6675 EFFN 2.000000
6676 CKSUM 1508026264
6677 STATS LOCAL MSV -7.6335 0.71997
6678 STATS LOCAL VITERBI -9.1422 0.71997
6679 STATS LOCAL FORWARD -3.5559 0.71997
6680 HMM A C G T
6681 m->m m->i m->d i->m i->i d->m d->d
6682 COMPO 1.19716 1.45323 1.30893 1.63976
6683 1.38629 1.38629 1.38629 1.38629
6684 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
6685 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
6686 1.38629 1.38629 1.38629 1.38629
6687 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6688 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
6689 1.38629 1.38629 1.38629 1.38629
6690 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6691 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
6692 1.38629 1.38629 1.38629 1.38629
6693 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6694 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
6695 1.38629 1.38629 1.38629 1.38629
6696 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6697 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
6698 1.38629 1.38629 1.38629 1.38629
6699 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6700 6 2.46232 0.33808 2.58153 2.07174 6 c - - -
6701 1.38629 1.38629 1.38629 1.38629
6702 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6703 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
6704 1.38629 1.38629 1.38629 1.38629
6705 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6706 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
6707 1.38629 1.38629 1.38629 1.38629
6708 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6709 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
6710 1.38629 1.38629 1.38629 1.38629
6711 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6712 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
6713 1.38629 1.38629 1.38629 1.38629
6714 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6715 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
6716 1.38629 1.38629 1.38629 1.38629
6717 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6718 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
6719 1.38629 1.38629 1.38629 1.38629
6720 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6721 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
6722 1.38629 1.38629 1.38629 1.38629
6723 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6724 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
6725 1.38629 1.38629 1.38629 1.38629
6726 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6727 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
6728 1.38629 1.38629 1.38629 1.38629
6729 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6730 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
6731 1.38629 1.38629 1.38629 1.38629
6732 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6733 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
6734 1.38629 1.38629 1.38629 1.38629
6735 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6736 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
6737 1.38629 1.38629 1.38629 1.38629
6738 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6739 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
6740 1.38629 1.38629 1.38629 1.38629
6741 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6742 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
6743 1.38629 1.38629 1.38629 1.38629
6744 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6745 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
6746 1.38629 1.38629 1.38629 1.38629
6747 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6748 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
6749 1.38629 1.38629 1.38629 1.38629
6750 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6751 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
6752 1.38629 1.38629 1.38629 1.38629
6753 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6754 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
6755 1.38629 1.38629 1.38629 1.38629
6756 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6757 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
6758 1.38629 1.38629 1.38629 1.38629
6759 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6760 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
6761 1.38629 1.38629 1.38629 1.38629
6762 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6763 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
6764 1.38629 1.38629 1.38629 1.38629
6765 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6766 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
6767 1.38629 1.38629 1.38629 1.38629
6768 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6769 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
6770 1.38629 1.38629 1.38629 1.38629
6771 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6772 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
6773 1.38629 1.38629 1.38629 1.38629
6774 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6775 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
6776 1.38629 1.38629 1.38629 1.38629
6777 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6778 32 2.38910 2.82844 0.25233 2.62837 32 g - - -
6779 1.38629 1.38629 1.38629 1.38629
6780 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6781 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
6782 1.38629 1.38629 1.38629 1.38629
6783 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6784 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
6785 1.38629 1.38629 1.38629 1.38629
6786 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6787 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
6788 1.38629 1.38629 1.38629 1.38629
6789 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6790 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
6791 1.38629 1.38629 1.38629 1.38629
6792 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6793 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
6794 1.38629 1.38629 1.38629 1.38629
6795 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6796 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
6797 1.38629 1.38629 1.38629 1.38629
6798 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6799 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
6800 1.38629 1.38629 1.38629 1.38629
6801 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6802 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
6803 1.38629 1.38629 1.38629 1.38629
6804 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6805 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
6806 1.38629 1.38629 1.38629 1.38629
6807 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6808 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
6809 1.38629 1.38629 1.38629 1.38629
6810 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6811 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
6812 1.38629 1.38629 1.38629 1.38629
6813 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6814 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
6815 1.38629 1.38629 1.38629 1.38629
6816 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6817 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
6818 1.38629 1.38629 1.38629 1.38629
6819 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6820 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
6821 1.38629 1.38629 1.38629 1.38629
6822 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6823 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
6824 1.38629 1.38629 1.38629 1.38629
6825 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6826 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
6827 1.38629 1.38629 1.38629 1.38629
6828 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6829 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
6830 1.38629 1.38629 1.38629 1.38629
6831 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6832 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
6833 1.38629 1.38629 1.38629 1.38629
6834 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6835 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
6836 1.38629 1.38629 1.38629 1.38629
6837 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6838 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
6839 1.38629 1.38629 1.38629 1.38629
6840 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6841 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
6842 1.38629 1.38629 1.38629 1.38629
6843 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6844 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
6845 1.38629 1.38629 1.38629 1.38629
6846 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6847 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
6848 1.38629 1.38629 1.38629 1.38629
6849 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6850 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
6851 1.38629 1.38629 1.38629 1.38629
6852 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6853 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
6854 1.38629 1.38629 1.38629 1.38629
6855 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6856 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
6857 1.38629 1.38629 1.38629 1.38629
6858 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6859 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
6860 1.38629 1.38629 1.38629 1.38629
6861 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6862 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
6863 1.38629 1.38629 1.38629 1.38629
6864 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6865 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
6866 1.38629 1.38629 1.38629 1.38629
6867 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6868 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
6869 1.38629 1.38629 1.38629 1.38629
6870 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6871 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
6872 1.38629 1.38629 1.38629 1.38629
6873 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6874 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
6875 1.38629 1.38629 1.38629 1.38629
6876 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6877 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
6878 1.38629 1.38629 1.38629 1.38629
6879 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6880 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
6881 1.38629 1.38629 1.38629 1.38629
6882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6883 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
6884 1.38629 1.38629 1.38629 1.38629
6885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6886 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
6887 1.38629 1.38629 1.38629 1.38629
6888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6889 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
6890 1.38629 1.38629 1.38629 1.38629
6891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6892 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
6893 1.38629 1.38629 1.38629 1.38629
6894 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
6895 //
6896 HMMER3/f [3.2.1 | June 2018]
6897 NAME long.29.aln
6898 LENG 82
6899 MAXL 176
6900 ALPH DNA
6901 RF no
6902 MM no
6903 CONS yes
6904 CS no
6905 MAP yes
6906 DATE Tue May 28 13:12:04 2019
6907 NSEQ 2
6908 EFFN 2.000000
6909 CKSUM 793374180
6910 STATS LOCAL MSV -8.9232 0.73665
6911 STATS LOCAL VITERBI -10.8392 0.73665
6912 STATS LOCAL FORWARD -3.0454 0.73665
6913 HMM A C G T
6914 m->m m->i m->d i->m i->i d->m d->d
6915 COMPO 1.39622 1.43714 1.34448 1.36967
6916 1.38629 1.38629 1.38629 1.38629
6917 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
6918 1 1.84050 1.95342 1.03654 1.06480 1 g - - -
6919 1.38629 1.38629 1.38629 1.38629
6920 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6921 2 2.01896 1.01168 2.12953 0.95527 2 t - - -
6922 1.38629 1.38629 1.38629 1.38629
6923 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6924 3 1.88401 1.14290 1.03416 1.75097 3 g - - -
6925 1.38629 1.38629 1.38629 1.38629
6926 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6927 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
6928 1.38629 1.38629 1.38629 1.38629
6929 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6930 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
6931 1.38629 1.38629 1.38629 1.38629
6932 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6933 6 1.12273 2.17004 0.88086 1.92408 6 g - - -
6934 1.38629 1.38629 1.38629 1.38629
6935 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6936 7 1.12273 2.17004 0.88086 1.92408 7 g - - -
6937 1.38629 1.38629 1.38629 1.38629
6938 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
6939 8 0.56139 2.08489 1.86185 1.89791 8 a - - -
6940 1.38629 1.38629 1.38629 1.38629
6941 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
6942 9 1.91091 1.78233 1.95844 0.61114 9 t - - -
6943 1.38629 1.38629 1.38629 1.38629
6944 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
6945 10 1.98342 0.60779 2.04641 1.66785 10 c - - -
6946 1.38629 1.38629 1.38629 1.38629
6947 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
6948 11 1.97267 2.25870 0.46443 2.05625 11 g - - -
6949 1.38629 1.38629 1.38629 1.38629
6950 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
6951 12 1.91091 1.78233 1.95844 0.61114 12 t - - -
6952 1.38629 1.38629 1.38629 1.38629
6953 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
6954 13 1.98342 0.60779 2.04641 1.66785 13 c - - -
6955 1.38629 1.38629 1.38629 1.38629
6956 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
6957 14 1.98342 0.60779 2.04641 1.66785 14 c - - -
6958 1.38629 1.38629 1.38629 1.38629
6959 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
6960 15 1.98342 0.60779 2.04641 1.66785 15 c - - -
6961 1.38629 1.38629 1.38629 1.38629
6962 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
6963 16 1.12273 2.17004 0.88086 1.92408 16 g - - -
6964 1.38629 1.38629 1.38629 1.38629
6965 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6966 17 1.12273 2.17004 0.88086 1.92408 17 g - - -
6967 1.38629 1.38629 1.38629 1.38629
6968 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6969 18 1.12273 2.17004 0.88086 1.92408 18 g - - -
6970 1.38629 1.38629 1.38629 1.38629
6971 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6972 19 1.09289 1.89038 1.88803 1.01509 19 t - - -
6973 1.38629 1.38629 1.38629 1.38629
6974 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6975 20 1.12273 2.17004 0.88086 1.92408 20 g - - -
6976 1.38629 1.38629 1.38629 1.38629
6977 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6978 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
6979 1.38629 1.38629 1.38629 1.38629
6980 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6981 22 1.88401 1.14290 1.03416 1.75097 22 g - - -
6982 1.38629 1.38629 1.38629 1.38629
6983 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6984 23 1.09289 1.89038 1.88803 1.01509 23 t - - -
6985 1.38629 1.38629 1.38629 1.38629
6986 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6987 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
6988 1.38629 1.38629 1.38629 1.38629
6989 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6990 25 1.08498 1.08670 1.94700 1.70340 25 a - - -
6991 1.38629 1.38629 1.38629 1.38629
6992 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6993 26 1.88401 1.14290 1.03416 1.75097 26 g - - -
6994 1.38629 1.38629 1.38629 1.38629
6995 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6996 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
6997 1.38629 1.38629 1.38629 1.38629
6998 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6999 28 1.08498 1.08670 1.94700 1.70340 28 a - - -
7000 1.38629 1.38629 1.38629 1.38629
7001 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7002 29 1.12273 2.17004 0.88086 1.92408 29 g - - -
7003 1.38629 1.38629 1.38629 1.38629
7004 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7005 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
7006 1.38629 1.38629 1.38629 1.38629
7007 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7008 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
7009 1.38629 1.38629 1.38629 1.38629
7010 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7011 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
7012 1.38629 1.38629 1.38629 1.38629
7013 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7014 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
7015 1.38629 1.38629 1.38629 1.38629
7016 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7017 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
7018 1.38629 1.38629 1.38629 1.38629
7019 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7020 35 1.12273 2.17004 0.88086 1.92408 35 g - - -
7021 1.38629 1.38629 1.38629 1.38629
7022 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7023 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
7024 1.38629 1.38629 1.38629 1.38629
7025 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7026 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
7027 1.38629 1.38629 1.38629 1.38629
7028 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7029 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
7030 1.38629 1.38629 1.38629 1.38629
7031 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7032 39 1.12273 2.17004 0.88086 1.92408 39 g - - -
7033 1.38629 1.38629 1.38629 1.38629
7034 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7035 40 1.08498 1.08670 1.94700 1.70340 40 a - - -
7036 1.38629 1.38629 1.38629 1.38629
7037 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7038 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
7039 1.38629 1.38629 1.38629 1.38629
7040 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7041 42 1.09289 1.89038 1.88803 1.01509 42 t - - -
7042 1.38629 1.38629 1.38629 1.38629
7043 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7044 43 1.08498 1.08670 1.94700 1.70340 43 a - - -
7045 1.38629 1.38629 1.38629 1.38629
7046 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7047 44 1.84050 1.95342 1.03654 1.06480 44 g - - -
7048 1.38629 1.38629 1.38629 1.38629
7049 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7050 45 2.01896 1.01168 2.12953 0.95527 45 t - - -
7051 1.38629 1.38629 1.38629 1.38629
7052 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7053 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
7054 1.38629 1.38629 1.38629 1.38629
7055 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7056 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
7057 1.38629 1.38629 1.38629 1.38629
7058 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7059 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
7060 1.38629 1.38629 1.38629 1.38629
7061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7062 49 2.01896 1.01168 2.12953 0.95527 49 t - - -
7063 1.38629 1.38629 1.38629 1.38629
7064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7065 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
7066 1.38629 1.38629 1.38629 1.38629
7067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7068 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
7069 1.38629 1.38629 1.38629 1.38629
7070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7071 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
7072 1.38629 1.38629 1.38629 1.38629
7073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7074 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
7075 1.38629 1.38629 1.38629 1.38629
7076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7077 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
7078 1.38629 1.38629 1.38629 1.38629
7079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7080 55 2.01896 1.01168 2.12953 0.95527 55 t - - -
7081 1.38629 1.38629 1.38629 1.38629
7082 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
7083 56 1.97267 2.25870 0.46443 2.05625 56 g - - -
7084 1.38629 1.38629 1.38629 1.38629
7085 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
7086 57 0.56139 2.08489 1.86185 1.89791 57 a - - -
7087 1.38629 1.38629 1.38629 1.38629
7088 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
7089 58 1.98342 0.60779 2.04641 1.66785 58 c - - -
7090 1.38629 1.38629 1.38629 1.38629
7091 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
7092 59 1.91091 1.78233 1.95844 0.61114 59 t - - -
7093 1.38629 1.38629 1.38629 1.38629
7094 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
7095 60 2.01896 1.01168 2.12953 0.95527 60 t - - -
7096 1.38629 1.38629 1.38629 1.38629
7097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7098 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
7099 1.38629 1.38629 1.38629 1.38629
7100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7101 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
7102 1.38629 1.38629 1.38629 1.38629
7103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7104 63 1.84050 1.95342 1.03654 1.06480 63 g - - -
7105 1.38629 1.38629 1.38629 1.38629
7106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7107 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
7108 1.38629 1.38629 1.38629 1.38629
7109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7110 65 1.09289 1.89038 1.88803 1.01509 65 t - - -
7111 1.38629 1.38629 1.38629 1.38629
7112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7113 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
7114 1.38629 1.38629 1.38629 1.38629
7115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7116 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
7117 1.38629 1.38629 1.38629 1.38629
7118 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
7119 68 1.91091 1.78233 1.95844 0.61114 68 t - - -
7120 1.38629 1.38629 1.38629 1.38629
7121 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
7122 69 0.56139 2.08489 1.86185 1.89791 69 a - - -
7123 1.38629 1.38629 1.38629 1.38629
7124 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
7125 70 1.91091 1.78233 1.95844 0.61114 70 t - - -
7126 1.38629 1.38629 1.38629 1.38629
7127 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
7128 71 1.98342 0.60779 2.04641 1.66785 71 c - - -
7129 1.38629 1.38629 1.38629 1.38629
7130 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
7131 72 1.91091 1.78233 1.95844 0.61114 72 t - - -
7132 1.38629 1.38629 1.38629 1.38629
7133 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
7134 73 1.97267 2.25870 0.46443 2.05625 73 g - - -
7135 1.38629 1.38629 1.38629 1.38629
7136 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
7137 74 1.97267 2.25870 0.46443 2.05625 74 g - - -
7138 1.38629 1.38629 1.38629 1.38629
7139 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
7140 75 1.97267 2.25870 0.46443 2.05625 75 g - - -
7141 1.38629 1.38629 1.38629 1.38629
7142 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
7143 76 0.56139 2.08489 1.86185 1.89791 76 a - - -
7144 1.38629 1.38629 1.38629 1.38629
7145 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
7146 77 1.98342 0.60779 2.04641 1.66785 77 c - - -
7147 1.38629 1.38629 1.38629 1.38629
7148 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
7149 78 1.97267 2.25870 0.46443 2.05625 78 g - - -
7150 1.38629 1.38629 1.38629 1.38629
7151 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
7152 79 0.56139 2.08489 1.86185 1.89791 79 a - - -
7153 1.38629 1.38629 1.38629 1.38629
7154 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
7155 80 2.01896 1.01168 2.12953 0.95527 80 t - - -
7156 1.38629 1.38629 1.38629 1.38629
7157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7158 81 2.01896 1.01168 2.12953 0.95527 81 t - - -
7159 1.38629 1.38629 1.38629 1.38629
7160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7161 82 2.01896 1.01168 2.12953 0.95527 82 t - - -
7162 1.38629 1.38629 1.38629 1.38629
7163 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
7164 //
7165 HMMER3/f [3.2.1 | June 2018]
7166 NAME long.30.aln
7167 LENG 70
7168 MAXL 160
7169 ALPH DNA
7170 RF no
7171 MM no
7172 CONS yes
7173 CS no
7174 MAP yes
7175 DATE Tue May 28 13:12:03 2019
7176 NSEQ 2
7177 EFFN 2.000000
7178 CKSUM 4093262019
7179 STATS LOCAL MSV -7.9445 0.72024
7180 STATS LOCAL VITERBI -9.3105 0.72024
7181 STATS LOCAL FORWARD -3.3976 0.72024
7182 HMM A C G T
7183 m->m m->i m->d i->m i->i d->m d->d
7184 COMPO 1.06451 1.63146 1.44587 1.49647
7185 1.38629 1.38629 1.38629 1.38629
7186 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
7187 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
7188 1.38629 1.38629 1.38629 1.38629
7189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7190 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
7191 1.38629 1.38629 1.38629 1.38629
7192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7193 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
7194 1.38629 1.38629 1.38629 1.38629
7195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7196 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
7197 1.38629 1.38629 1.38629 1.38629
7198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7199 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
7200 1.38629 1.38629 1.38629 1.38629
7201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7202 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
7203 1.38629 1.38629 1.38629 1.38629
7204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7205 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
7206 1.38629 1.38629 1.38629 1.38629
7207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7208 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
7209 1.38629 1.38629 1.38629 1.38629
7210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7211 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
7212 1.38629 1.38629 1.38629 1.38629
7213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7214 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
7215 1.38629 1.38629 1.38629 1.38629
7216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7217 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
7218 1.38629 1.38629 1.38629 1.38629
7219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7220 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
7221 1.38629 1.38629 1.38629 1.38629
7222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7223 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
7224 1.38629 1.38629 1.38629 1.38629
7225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7226 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
7227 1.38629 1.38629 1.38629 1.38629
7228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7229 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
7230 1.38629 1.38629 1.38629 1.38629
7231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7232 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
7233 1.38629 1.38629 1.38629 1.38629
7234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7235 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
7236 1.38629 1.38629 1.38629 1.38629
7237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7238 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
7239 1.38629 1.38629 1.38629 1.38629
7240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7241 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
7242 1.38629 1.38629 1.38629 1.38629
7243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7244 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
7245 1.38629 1.38629 1.38629 1.38629
7246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7247 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
7248 1.38629 1.38629 1.38629 1.38629
7249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7250 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
7251 1.38629 1.38629 1.38629 1.38629
7252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7253 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
7254 1.38629 1.38629 1.38629 1.38629
7255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7256 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
7257 1.38629 1.38629 1.38629 1.38629
7258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7259 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
7260 1.38629 1.38629 1.38629 1.38629
7261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7262 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
7263 1.38629 1.38629 1.38629 1.38629
7264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7265 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
7266 1.38629 1.38629 1.38629 1.38629
7267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7268 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
7269 1.38629 1.38629 1.38629 1.38629
7270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7271 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
7272 1.38629 1.38629 1.38629 1.38629
7273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7274 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
7275 1.38629 1.38629 1.38629 1.38629
7276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7277 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
7278 1.38629 1.38629 1.38629 1.38629
7279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7280 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
7281 1.38629 1.38629 1.38629 1.38629
7282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7283 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
7284 1.38629 1.38629 1.38629 1.38629
7285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7286 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
7287 1.38629 1.38629 1.38629 1.38629
7288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7289 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
7290 1.38629 1.38629 1.38629 1.38629
7291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7292 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
7293 1.38629 1.38629 1.38629 1.38629
7294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7295 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
7296 1.38629 1.38629 1.38629 1.38629
7297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7298 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
7299 1.38629 1.38629 1.38629 1.38629
7300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7301 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
7302 1.38629 1.38629 1.38629 1.38629
7303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7304 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
7305 1.38629 1.38629 1.38629 1.38629
7306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7307 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
7308 1.38629 1.38629 1.38629 1.38629
7309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7310 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
7311 1.38629 1.38629 1.38629 1.38629
7312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7313 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
7314 1.38629 1.38629 1.38629 1.38629
7315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7316 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
7317 1.38629 1.38629 1.38629 1.38629
7318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7319 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
7320 1.38629 1.38629 1.38629 1.38629
7321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7322 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
7323 1.38629 1.38629 1.38629 1.38629
7324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7325 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
7326 1.38629 1.38629 1.38629 1.38629
7327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7328 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
7329 1.38629 1.38629 1.38629 1.38629
7330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7331 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
7332 1.38629 1.38629 1.38629 1.38629
7333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7334 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
7335 1.38629 1.38629 1.38629 1.38629
7336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7337 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
7338 1.38629 1.38629 1.38629 1.38629
7339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7340 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
7341 1.38629 1.38629 1.38629 1.38629
7342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7343 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
7344 1.38629 1.38629 1.38629 1.38629
7345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7346 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
7347 1.38629 1.38629 1.38629 1.38629
7348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7349 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
7350 1.38629 1.38629 1.38629 1.38629
7351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7352 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
7353 1.38629 1.38629 1.38629 1.38629
7354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7355 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
7356 1.38629 1.38629 1.38629 1.38629
7357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7358 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
7359 1.38629 1.38629 1.38629 1.38629
7360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7361 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
7362 1.38629 1.38629 1.38629 1.38629
7363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7364 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
7365 1.38629 1.38629 1.38629 1.38629
7366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7367 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
7368 1.38629 1.38629 1.38629 1.38629
7369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7370 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
7371 1.38629 1.38629 1.38629 1.38629
7372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7373 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
7374 1.38629 1.38629 1.38629 1.38629
7375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7376 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
7377 1.38629 1.38629 1.38629 1.38629
7378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7379 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
7380 1.38629 1.38629 1.38629 1.38629
7381 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7382 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
7383 1.38629 1.38629 1.38629 1.38629
7384 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7385 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
7386 1.38629 1.38629 1.38629 1.38629
7387 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7388 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
7389 1.38629 1.38629 1.38629 1.38629
7390 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7391 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
7392 1.38629 1.38629 1.38629 1.38629
7393 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7394 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
7395 1.38629 1.38629 1.38629 1.38629
7396 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
7397 //
7398 HMMER3/f [3.2.1 | June 2018]
7399 NAME long.31.aln
7400 LENG 70
7401 MAXL 160
7402 ALPH DNA
7403 RF no
7404 MM no
7405 CONS yes
7406 CS no
7407 MAP yes
7408 DATE Tue May 28 13:12:04 2019
7409 NSEQ 2
7410 EFFN 2.000000
7411 CKSUM 994513381
7412 STATS LOCAL MSV -8.5121 0.72207
7413 STATS LOCAL VITERBI -9.3704 0.72207
7414 STATS LOCAL FORWARD -3.5012 0.72207
7415 HMM A C G T
7416 m->m m->i m->d i->m i->i d->m d->d
7417 COMPO 1.95498 1.24900 1.45266 1.08562
7418 1.38629 1.38629 1.38629 1.38629
7419 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
7420 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
7421 1.38629 1.38629 1.38629 1.38629
7422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7423 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
7424 1.38629 1.38629 1.38629 1.38629
7425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7426 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
7427 1.38629 1.38629 1.38629 1.38629
7428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7429 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
7430 1.38629 1.38629 1.38629 1.38629
7431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7432 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
7433 1.38629 1.38629 1.38629 1.38629
7434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7435 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
7436 1.38629 1.38629 1.38629 1.38629
7437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7438 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
7439 1.38629 1.38629 1.38629 1.38629
7440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7441 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
7442 1.38629 1.38629 1.38629 1.38629
7443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7444 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
7445 1.38629 1.38629 1.38629 1.38629
7446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7447 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
7448 1.38629 1.38629 1.38629 1.38629
7449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7450 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
7451 1.38629 1.38629 1.38629 1.38629
7452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7453 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
7454 1.38629 1.38629 1.38629 1.38629
7455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7456 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
7457 1.38629 1.38629 1.38629 1.38629
7458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7459 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
7460 1.38629 1.38629 1.38629 1.38629
7461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7462 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
7463 1.38629 1.38629 1.38629 1.38629
7464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7465 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
7466 1.38629 1.38629 1.38629 1.38629
7467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7468 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
7469 1.38629 1.38629 1.38629 1.38629
7470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7471 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
7472 1.38629 1.38629 1.38629 1.38629
7473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7474 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
7475 1.38629 1.38629 1.38629 1.38629
7476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7477 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
7478 1.38629 1.38629 1.38629 1.38629
7479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7480 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
7481 1.38629 1.38629 1.38629 1.38629
7482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7483 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
7484 1.38629 1.38629 1.38629 1.38629
7485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7486 23 2.38910 2.82844 0.25233 2.62837 23 g - - -
7487 1.38629 1.38629 1.38629 1.38629
7488 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7489 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
7490 1.38629 1.38629 1.38629 1.38629
7491 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7492 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
7493 1.38629 1.38629 1.38629 1.38629
7494 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7495 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
7496 1.38629 1.38629 1.38629 1.38629
7497 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7498 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
7499 1.38629 1.38629 1.38629 1.38629
7500 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7501 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
7502 1.38629 1.38629 1.38629 1.38629
7503 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7504 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
7505 1.38629 1.38629 1.38629 1.38629
7506 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7507 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
7508 1.38629 1.38629 1.38629 1.38629
7509 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7510 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
7511 1.38629 1.38629 1.38629 1.38629
7512 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7513 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
7514 1.38629 1.38629 1.38629 1.38629
7515 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7516 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
7517 1.38629 1.38629 1.38629 1.38629
7518 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7519 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
7520 1.38629 1.38629 1.38629 1.38629
7521 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7522 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
7523 1.38629 1.38629 1.38629 1.38629
7524 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7525 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
7526 1.38629 1.38629 1.38629 1.38629
7527 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7528 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
7529 1.38629 1.38629 1.38629 1.38629
7530 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7531 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
7532 1.38629 1.38629 1.38629 1.38629
7533 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7534 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
7535 1.38629 1.38629 1.38629 1.38629
7536 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7537 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
7538 1.38629 1.38629 1.38629 1.38629
7539 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7540 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
7541 1.38629 1.38629 1.38629 1.38629
7542 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7543 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
7544 1.38629 1.38629 1.38629 1.38629
7545 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7546 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
7547 1.38629 1.38629 1.38629 1.38629
7548 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7549 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
7550 1.38629 1.38629 1.38629 1.38629
7551 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7552 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
7553 1.38629 1.38629 1.38629 1.38629
7554 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7555 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
7556 1.38629 1.38629 1.38629 1.38629
7557 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7558 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
7559 1.38629 1.38629 1.38629 1.38629
7560 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7561 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
7562 1.38629 1.38629 1.38629 1.38629
7563 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7564 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
7565 1.38629 1.38629 1.38629 1.38629
7566 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7567 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
7568 1.38629 1.38629 1.38629 1.38629
7569 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7570 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
7571 1.38629 1.38629 1.38629 1.38629
7572 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7573 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
7574 1.38629 1.38629 1.38629 1.38629
7575 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7576 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
7577 1.38629 1.38629 1.38629 1.38629
7578 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7579 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
7580 1.38629 1.38629 1.38629 1.38629
7581 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7582 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
7583 1.38629 1.38629 1.38629 1.38629
7584 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7585 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
7586 1.38629 1.38629 1.38629 1.38629
7587 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7588 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
7589 1.38629 1.38629 1.38629 1.38629
7590 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7591 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
7592 1.38629 1.38629 1.38629 1.38629
7593 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7594 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
7595 1.38629 1.38629 1.38629 1.38629
7596 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7597 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
7598 1.38629 1.38629 1.38629 1.38629
7599 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7600 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
7601 1.38629 1.38629 1.38629 1.38629
7602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7603 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
7604 1.38629 1.38629 1.38629 1.38629
7605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7606 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
7607 1.38629 1.38629 1.38629 1.38629
7608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7609 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
7610 1.38629 1.38629 1.38629 1.38629
7611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7612 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
7613 1.38629 1.38629 1.38629 1.38629
7614 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7615 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
7616 1.38629 1.38629 1.38629 1.38629
7617 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7618 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
7619 1.38629 1.38629 1.38629 1.38629
7620 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7621 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
7622 1.38629 1.38629 1.38629 1.38629
7623 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7624 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
7625 1.38629 1.38629 1.38629 1.38629
7626 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7627 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
7628 1.38629 1.38629 1.38629 1.38629
7629 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
7630 //
7631 HMMER3/f [3.2.1 | June 2018]
7632 NAME long.32.aln
7633 LENG 70
7634 MAXL 160
7635 ALPH DNA
7636 RF no
7637 MM no
7638 CONS yes
7639 CS no
7640 MAP yes
7641 DATE Tue May 28 13:12:02 2019
7642 NSEQ 2
7643 EFFN 2.000000
7644 CKSUM 2595042177
7645 STATS LOCAL MSV -8.2623 0.72196
7646 STATS LOCAL VITERBI -9.2330 0.72196
7647 STATS LOCAL FORWARD -3.2805 0.72196
7648 HMM A C G T
7649 m->m m->i m->d i->m i->i d->m d->d
7650 COMPO 1.34295 1.40503 1.75567 1.13702
7651 1.38629 1.38629 1.38629 1.38629
7652 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
7653 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
7654 1.38629 1.38629 1.38629 1.38629
7655 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7656 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
7657 1.38629 1.38629 1.38629 1.38629
7658 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7659 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
7660 1.38629 1.38629 1.38629 1.38629
7661 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7662 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
7663 1.38629 1.38629 1.38629 1.38629
7664 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7665 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
7666 1.38629 1.38629 1.38629 1.38629
7667 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7668 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
7669 1.38629 1.38629 1.38629 1.38629
7670 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7671 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
7672 1.38629 1.38629 1.38629 1.38629
7673 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7674 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
7675 1.38629 1.38629 1.38629 1.38629
7676 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7677 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
7678 1.38629 1.38629 1.38629 1.38629
7679 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7680 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
7681 1.38629 1.38629 1.38629 1.38629
7682 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7683 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
7684 1.38629 1.38629 1.38629 1.38629
7685 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7686 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
7687 1.38629 1.38629 1.38629 1.38629
7688 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7689 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
7690 1.38629 1.38629 1.38629 1.38629
7691 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7692 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
7693 1.38629 1.38629 1.38629 1.38629
7694 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7695 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
7696 1.38629 1.38629 1.38629 1.38629
7697 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7698 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
7699 1.38629 1.38629 1.38629 1.38629
7700 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7701 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
7702 1.38629 1.38629 1.38629 1.38629
7703 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7704 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
7705 1.38629 1.38629 1.38629 1.38629
7706 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7707 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
7708 1.38629 1.38629 1.38629 1.38629
7709 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7710 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
7711 1.38629 1.38629 1.38629 1.38629
7712 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7713 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
7714 1.38629 1.38629 1.38629 1.38629
7715 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7716 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
7717 1.38629 1.38629 1.38629 1.38629
7718 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7719 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
7720 1.38629 1.38629 1.38629 1.38629
7721 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7722 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
7723 1.38629 1.38629 1.38629 1.38629
7724 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7725 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
7726 1.38629 1.38629 1.38629 1.38629
7727 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7728 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
7729 1.38629 1.38629 1.38629 1.38629
7730 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7731 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
7732 1.38629 1.38629 1.38629 1.38629
7733 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7734 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
7735 1.38629 1.38629 1.38629 1.38629
7736 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7737 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
7738 1.38629 1.38629 1.38629 1.38629
7739 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7740 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
7741 1.38629 1.38629 1.38629 1.38629
7742 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7743 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
7744 1.38629 1.38629 1.38629 1.38629
7745 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7746 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
7747 1.38629 1.38629 1.38629 1.38629
7748 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7749 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
7750 1.38629 1.38629 1.38629 1.38629
7751 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7752 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
7753 1.38629 1.38629 1.38629 1.38629
7754 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7755 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
7756 1.38629 1.38629 1.38629 1.38629
7757 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7758 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
7759 1.38629 1.38629 1.38629 1.38629
7760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7761 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
7762 1.38629 1.38629 1.38629 1.38629
7763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7764 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
7765 1.38629 1.38629 1.38629 1.38629
7766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7767 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
7768 1.38629 1.38629 1.38629 1.38629
7769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7770 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
7771 1.38629 1.38629 1.38629 1.38629
7772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7773 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
7774 1.38629 1.38629 1.38629 1.38629
7775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7776 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
7777 1.38629 1.38629 1.38629 1.38629
7778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7779 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
7780 1.38629 1.38629 1.38629 1.38629
7781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7782 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
7783 1.38629 1.38629 1.38629 1.38629
7784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7785 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
7786 1.38629 1.38629 1.38629 1.38629
7787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7788 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
7789 1.38629 1.38629 1.38629 1.38629
7790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7791 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
7792 1.38629 1.38629 1.38629 1.38629
7793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7794 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
7795 1.38629 1.38629 1.38629 1.38629
7796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7797 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
7798 1.38629 1.38629 1.38629 1.38629
7799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7800 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
7801 1.38629 1.38629 1.38629 1.38629
7802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7803 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
7804 1.38629 1.38629 1.38629 1.38629
7805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7806 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
7807 1.38629 1.38629 1.38629 1.38629
7808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7809 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
7810 1.38629 1.38629 1.38629 1.38629
7811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7812 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
7813 1.38629 1.38629 1.38629 1.38629
7814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7815 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
7816 1.38629 1.38629 1.38629 1.38629
7817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7818 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
7819 1.38629 1.38629 1.38629 1.38629
7820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7821 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
7822 1.38629 1.38629 1.38629 1.38629
7823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7824 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
7825 1.38629 1.38629 1.38629 1.38629
7826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7827 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
7828 1.38629 1.38629 1.38629 1.38629
7829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7830 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
7831 1.38629 1.38629 1.38629 1.38629
7832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7833 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
7834 1.38629 1.38629 1.38629 1.38629
7835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7836 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
7837 1.38629 1.38629 1.38629 1.38629
7838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7839 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
7840 1.38629 1.38629 1.38629 1.38629
7841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7842 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
7843 1.38629 1.38629 1.38629 1.38629
7844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7845 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
7846 1.38629 1.38629 1.38629 1.38629
7847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7848 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
7849 1.38629 1.38629 1.38629 1.38629
7850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7851 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
7852 1.38629 1.38629 1.38629 1.38629
7853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7854 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
7855 1.38629 1.38629 1.38629 1.38629
7856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7857 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
7858 1.38629 1.38629 1.38629 1.38629
7859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7860 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
7861 1.38629 1.38629 1.38629 1.38629
7862 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
7863 //
7864 HMMER3/f [3.2.1 | June 2018]
7865 NAME long.33.aln
7866 LENG 70
7867 MAXL 160
7868 ALPH DNA
7869 RF no
7870 MM no
7871 CONS yes
7872 CS no
7873 MAP yes
7874 DATE Tue May 28 13:12:03 2019
7875 NSEQ 2
7876 EFFN 2.000000
7877 CKSUM 2524839615
7878 STATS LOCAL MSV -8.0121 0.72159
7879 STATS LOCAL VITERBI -9.2643 0.72159
7880 STATS LOCAL FORWARD -3.5930 0.72159
7881 HMM A C G T
7882 m->m m->i m->d i->m i->i d->m d->d
7883 COMPO 1.41710 1.20864 1.66398 1.31083
7884 1.38629 1.38629 1.38629 1.38629
7885 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
7886 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
7887 1.38629 1.38629 1.38629 1.38629
7888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7889 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
7890 1.38629 1.38629 1.38629 1.38629
7891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7892 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
7893 1.38629 1.38629 1.38629 1.38629
7894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7895 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
7896 1.38629 1.38629 1.38629 1.38629
7897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7898 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
7899 1.38629 1.38629 1.38629 1.38629
7900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7901 6 2.46232 0.33808 2.58153 2.07174 6 c - - -
7902 1.38629 1.38629 1.38629 1.38629
7903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7904 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
7905 1.38629 1.38629 1.38629 1.38629
7906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7907 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
7908 1.38629 1.38629 1.38629 1.38629
7909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7910 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
7911 1.38629 1.38629 1.38629 1.38629
7912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7913 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
7914 1.38629 1.38629 1.38629 1.38629
7915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7916 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
7917 1.38629 1.38629 1.38629 1.38629
7918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7919 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
7920 1.38629 1.38629 1.38629 1.38629
7921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7922 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
7923 1.38629 1.38629 1.38629 1.38629
7924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7925 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
7926 1.38629 1.38629 1.38629 1.38629
7927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7928 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
7929 1.38629 1.38629 1.38629 1.38629
7930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7931 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
7932 1.38629 1.38629 1.38629 1.38629
7933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7934 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
7935 1.38629 1.38629 1.38629 1.38629
7936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7937 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
7938 1.38629 1.38629 1.38629 1.38629
7939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7940 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
7941 1.38629 1.38629 1.38629 1.38629
7942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7943 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
7944 1.38629 1.38629 1.38629 1.38629
7945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7946 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
7947 1.38629 1.38629 1.38629 1.38629
7948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7949 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
7950 1.38629 1.38629 1.38629 1.38629
7951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7952 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
7953 1.38629 1.38629 1.38629 1.38629
7954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7955 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
7956 1.38629 1.38629 1.38629 1.38629
7957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7958 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
7959 1.38629 1.38629 1.38629 1.38629
7960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7961 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
7962 1.38629 1.38629 1.38629 1.38629
7963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7964 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
7965 1.38629 1.38629 1.38629 1.38629
7966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7967 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
7968 1.38629 1.38629 1.38629 1.38629
7969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7970 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
7971 1.38629 1.38629 1.38629 1.38629
7972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7973 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
7974 1.38629 1.38629 1.38629 1.38629
7975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7976 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
7977 1.38629 1.38629 1.38629 1.38629
7978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7979 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
7980 1.38629 1.38629 1.38629 1.38629
7981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7982 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
7983 1.38629 1.38629 1.38629 1.38629
7984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7985 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
7986 1.38629 1.38629 1.38629 1.38629
7987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7988 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
7989 1.38629 1.38629 1.38629 1.38629
7990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7991 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
7992 1.38629 1.38629 1.38629 1.38629
7993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7994 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
7995 1.38629 1.38629 1.38629 1.38629
7996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7997 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
7998 1.38629 1.38629 1.38629 1.38629
7999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8000 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
8001 1.38629 1.38629 1.38629 1.38629
8002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8003 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
8004 1.38629 1.38629 1.38629 1.38629
8005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8006 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
8007 1.38629 1.38629 1.38629 1.38629
8008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8009 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
8010 1.38629 1.38629 1.38629 1.38629
8011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8012 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
8013 1.38629 1.38629 1.38629 1.38629
8014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8015 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
8016 1.38629 1.38629 1.38629 1.38629
8017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8018 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
8019 1.38629 1.38629 1.38629 1.38629
8020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8021 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
8022 1.38629 1.38629 1.38629 1.38629
8023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8024 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
8025 1.38629 1.38629 1.38629 1.38629
8026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8027 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
8028 1.38629 1.38629 1.38629 1.38629
8029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8030 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
8031 1.38629 1.38629 1.38629 1.38629
8032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8033 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
8034 1.38629 1.38629 1.38629 1.38629
8035 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8036 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
8037 1.38629 1.38629 1.38629 1.38629
8038 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8039 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
8040 1.38629 1.38629 1.38629 1.38629
8041 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8042 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
8043 1.38629 1.38629 1.38629 1.38629
8044 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8045 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
8046 1.38629 1.38629 1.38629 1.38629
8047 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8048 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
8049 1.38629 1.38629 1.38629 1.38629
8050 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8051 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
8052 1.38629 1.38629 1.38629 1.38629
8053 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8054 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
8055 1.38629 1.38629 1.38629 1.38629
8056 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8057 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
8058 1.38629 1.38629 1.38629 1.38629
8059 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8060 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
8061 1.38629 1.38629 1.38629 1.38629
8062 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8063 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
8064 1.38629 1.38629 1.38629 1.38629
8065 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8066 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
8067 1.38629 1.38629 1.38629 1.38629
8068 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8069 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
8070 1.38629 1.38629 1.38629 1.38629
8071 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8072 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
8073 1.38629 1.38629 1.38629 1.38629
8074 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8075 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
8076 1.38629 1.38629 1.38629 1.38629
8077 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8078 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
8079 1.38629 1.38629 1.38629 1.38629
8080 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8081 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
8082 1.38629 1.38629 1.38629 1.38629
8083 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8084 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
8085 1.38629 1.38629 1.38629 1.38629
8086 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8087 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
8088 1.38629 1.38629 1.38629 1.38629
8089 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8090 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
8091 1.38629 1.38629 1.38629 1.38629
8092 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8093 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
8094 1.38629 1.38629 1.38629 1.38629
8095 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
8096 //
8097 HMMER3/f [3.2.1 | June 2018]
8098 NAME long.34.aln
8099 LENG 70
8100 MAXL 160
8101 ALPH DNA
8102 RF no
8103 MM no
8104 CONS yes
8105 CS no
8106 MAP yes
8107 DATE Tue May 28 13:12:03 2019
8108 NSEQ 2
8109 EFFN 2.000000
8110 CKSUM 195830549
8111 STATS LOCAL MSV -8.1832 0.72173
8112 STATS LOCAL VITERBI -9.2304 0.72173
8113 STATS LOCAL FORWARD -3.8439 0.72173
8114 HMM A C G T
8115 m->m m->i m->d i->m i->i d->m d->d
8116 COMPO 1.34375 1.47628 1.65579 1.14035
8117 1.38629 1.38629 1.38629 1.38629
8118 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
8119 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
8120 1.38629 1.38629 1.38629 1.38629
8121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8122 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
8123 1.38629 1.38629 1.38629 1.38629
8124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8125 3 2.38910 2.82844 0.25233 2.62837 3 g - - -
8126 1.38629 1.38629 1.38629 1.38629
8127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8128 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
8129 1.38629 1.38629 1.38629 1.38629
8130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8131 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
8132 1.38629 1.38629 1.38629 1.38629
8133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8134 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
8135 1.38629 1.38629 1.38629 1.38629
8136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8137 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
8138 1.38629 1.38629 1.38629 1.38629
8139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8140 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
8141 1.38629 1.38629 1.38629 1.38629
8142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8143 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
8144 1.38629 1.38629 1.38629 1.38629
8145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8146 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
8147 1.38629 1.38629 1.38629 1.38629
8148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8149 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
8150 1.38629 1.38629 1.38629 1.38629
8151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8152 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
8153 1.38629 1.38629 1.38629 1.38629
8154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8155 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
8156 1.38629 1.38629 1.38629 1.38629
8157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8158 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
8159 1.38629 1.38629 1.38629 1.38629
8160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8161 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
8162 1.38629 1.38629 1.38629 1.38629
8163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8164 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
8165 1.38629 1.38629 1.38629 1.38629
8166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8167 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
8168 1.38629 1.38629 1.38629 1.38629
8169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8170 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
8171 1.38629 1.38629 1.38629 1.38629
8172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8173 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
8174 1.38629 1.38629 1.38629 1.38629
8175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8176 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
8177 1.38629 1.38629 1.38629 1.38629
8178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8179 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
8180 1.38629 1.38629 1.38629 1.38629
8181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8182 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
8183 1.38629 1.38629 1.38629 1.38629
8184 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8185 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
8186 1.38629 1.38629 1.38629 1.38629
8187 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8188 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
8189 1.38629 1.38629 1.38629 1.38629
8190 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8191 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
8192 1.38629 1.38629 1.38629 1.38629
8193 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8194 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
8195 1.38629 1.38629 1.38629 1.38629
8196 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8197 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
8198 1.38629 1.38629 1.38629 1.38629
8199 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8200 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
8201 1.38629 1.38629 1.38629 1.38629
8202 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8203 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
8204 1.38629 1.38629 1.38629 1.38629
8205 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8206 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
8207 1.38629 1.38629 1.38629 1.38629
8208 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8209 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
8210 1.38629 1.38629 1.38629 1.38629
8211 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8212 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
8213 1.38629 1.38629 1.38629 1.38629
8214 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8215 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
8216 1.38629 1.38629 1.38629 1.38629
8217 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8218 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
8219 1.38629 1.38629 1.38629 1.38629
8220 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8221 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
8222 1.38629 1.38629 1.38629 1.38629
8223 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8224 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
8225 1.38629 1.38629 1.38629 1.38629
8226 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8227 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
8228 1.38629 1.38629 1.38629 1.38629
8229 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8230 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
8231 1.38629 1.38629 1.38629 1.38629
8232 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8233 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
8234 1.38629 1.38629 1.38629 1.38629
8235 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8236 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
8237 1.38629 1.38629 1.38629 1.38629
8238 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8239 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
8240 1.38629 1.38629 1.38629 1.38629
8241 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8242 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
8243 1.38629 1.38629 1.38629 1.38629
8244 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8245 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
8246 1.38629 1.38629 1.38629 1.38629
8247 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8248 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
8249 1.38629 1.38629 1.38629 1.38629
8250 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8251 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
8252 1.38629 1.38629 1.38629 1.38629
8253 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8254 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
8255 1.38629 1.38629 1.38629 1.38629
8256 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8257 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
8258 1.38629 1.38629 1.38629 1.38629
8259 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8260 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
8261 1.38629 1.38629 1.38629 1.38629
8262 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8263 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
8264 1.38629 1.38629 1.38629 1.38629
8265 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8266 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
8267 1.38629 1.38629 1.38629 1.38629
8268 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8269 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
8270 1.38629 1.38629 1.38629 1.38629
8271 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8272 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
8273 1.38629 1.38629 1.38629 1.38629
8274 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8275 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
8276 1.38629 1.38629 1.38629 1.38629
8277 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8278 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
8279 1.38629 1.38629 1.38629 1.38629
8280 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8281 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
8282 1.38629 1.38629 1.38629 1.38629
8283 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8284 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
8285 1.38629 1.38629 1.38629 1.38629
8286 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8287 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
8288 1.38629 1.38629 1.38629 1.38629
8289 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8290 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
8291 1.38629 1.38629 1.38629 1.38629
8292 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8293 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
8294 1.38629 1.38629 1.38629 1.38629
8295 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8296 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
8297 1.38629 1.38629 1.38629 1.38629
8298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8299 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
8300 1.38629 1.38629 1.38629 1.38629
8301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8302 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
8303 1.38629 1.38629 1.38629 1.38629
8304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8305 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
8306 1.38629 1.38629 1.38629 1.38629
8307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8308 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
8309 1.38629 1.38629 1.38629 1.38629
8310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8311 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
8312 1.38629 1.38629 1.38629 1.38629
8313 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8314 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
8315 1.38629 1.38629 1.38629 1.38629
8316 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8317 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
8318 1.38629 1.38629 1.38629 1.38629
8319 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8320 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
8321 1.38629 1.38629 1.38629 1.38629
8322 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8323 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
8324 1.38629 1.38629 1.38629 1.38629
8325 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8326 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
8327 1.38629 1.38629 1.38629 1.38629
8328 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
8329 //
8330 HMMER3/f [3.2.1 | June 2018]
8331 NAME long.35.aln
8332 LENG 70
8333 MAXL 160
8334 ALPH DNA
8335 RF no
8336 MM no
8337 CONS yes
8338 CS no
8339 MAP yes
8340 DATE Tue May 28 13:12:04 2019
8341 NSEQ 2
8342 EFFN 2.000000
8343 CKSUM 1613446834
8344 STATS LOCAL MSV -7.8105 0.72031
8345 STATS LOCAL VITERBI -9.1594 0.72031
8346 STATS LOCAL FORWARD -3.0929 0.72031
8347 HMM A C G T
8348 m->m m->i m->d i->m i->i d->m d->d
8349 COMPO 0.94738 1.59256 1.61110 1.56461
8350 1.38629 1.38629 1.38629 1.38629
8351 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
8352 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
8353 1.38629 1.38629 1.38629 1.38629
8354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8355 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
8356 1.38629 1.38629 1.38629 1.38629
8357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8358 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
8359 1.38629 1.38629 1.38629 1.38629
8360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8361 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
8362 1.38629 1.38629 1.38629 1.38629
8363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8364 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
8365 1.38629 1.38629 1.38629 1.38629
8366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8367 6 2.46232 0.33808 2.58153 2.07174 6 c - - -
8368 1.38629 1.38629 1.38629 1.38629
8369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8370 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
8371 1.38629 1.38629 1.38629 1.38629
8372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8373 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
8374 1.38629 1.38629 1.38629 1.38629
8375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8376 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
8377 1.38629 1.38629 1.38629 1.38629
8378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8379 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
8380 1.38629 1.38629 1.38629 1.38629
8381 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8382 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
8383 1.38629 1.38629 1.38629 1.38629
8384 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8385 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
8386 1.38629 1.38629 1.38629 1.38629
8387 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8388 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
8389 1.38629 1.38629 1.38629 1.38629
8390 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8391 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
8392 1.38629 1.38629 1.38629 1.38629
8393 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8394 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
8395 1.38629 1.38629 1.38629 1.38629
8396 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8397 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
8398 1.38629 1.38629 1.38629 1.38629
8399 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8400 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
8401 1.38629 1.38629 1.38629 1.38629
8402 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8403 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
8404 1.38629 1.38629 1.38629 1.38629
8405 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8406 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
8407 1.38629 1.38629 1.38629 1.38629
8408 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8409 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
8410 1.38629 1.38629 1.38629 1.38629
8411 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8412 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
8413 1.38629 1.38629 1.38629 1.38629
8414 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8415 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
8416 1.38629 1.38629 1.38629 1.38629
8417 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8418 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
8419 1.38629 1.38629 1.38629 1.38629
8420 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8421 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
8422 1.38629 1.38629 1.38629 1.38629
8423 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8424 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
8425 1.38629 1.38629 1.38629 1.38629
8426 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8427 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
8428 1.38629 1.38629 1.38629 1.38629
8429 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8430 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
8431 1.38629 1.38629 1.38629 1.38629
8432 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8433 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
8434 1.38629 1.38629 1.38629 1.38629
8435 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8436 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
8437 1.38629 1.38629 1.38629 1.38629
8438 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8439 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
8440 1.38629 1.38629 1.38629 1.38629
8441 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8442 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
8443 1.38629 1.38629 1.38629 1.38629
8444 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8445 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
8446 1.38629 1.38629 1.38629 1.38629
8447 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8448 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
8449 1.38629 1.38629 1.38629 1.38629
8450 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8451 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
8452 1.38629 1.38629 1.38629 1.38629
8453 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8454 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
8455 1.38629 1.38629 1.38629 1.38629
8456 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8457 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
8458 1.38629 1.38629 1.38629 1.38629
8459 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8460 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
8461 1.38629 1.38629 1.38629 1.38629
8462 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8463 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
8464 1.38629 1.38629 1.38629 1.38629
8465 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8466 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
8467 1.38629 1.38629 1.38629 1.38629
8468 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8469 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
8470 1.38629 1.38629 1.38629 1.38629
8471 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8472 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
8473 1.38629 1.38629 1.38629 1.38629
8474 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8475 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
8476 1.38629 1.38629 1.38629 1.38629
8477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8478 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
8479 1.38629 1.38629 1.38629 1.38629
8480 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8481 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
8482 1.38629 1.38629 1.38629 1.38629
8483 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8484 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
8485 1.38629 1.38629 1.38629 1.38629
8486 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8487 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
8488 1.38629 1.38629 1.38629 1.38629
8489 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8490 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
8491 1.38629 1.38629 1.38629 1.38629
8492 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8493 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
8494 1.38629 1.38629 1.38629 1.38629
8495 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8496 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
8497 1.38629 1.38629 1.38629 1.38629
8498 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8499 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
8500 1.38629 1.38629 1.38629 1.38629
8501 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8502 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
8503 1.38629 1.38629 1.38629 1.38629
8504 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8505 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
8506 1.38629 1.38629 1.38629 1.38629
8507 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8508 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
8509 1.38629 1.38629 1.38629 1.38629
8510 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8511 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
8512 1.38629 1.38629 1.38629 1.38629
8513 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8514 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
8515 1.38629 1.38629 1.38629 1.38629
8516 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8517 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
8518 1.38629 1.38629 1.38629 1.38629
8519 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8520 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
8521 1.38629 1.38629 1.38629 1.38629
8522 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8523 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
8524 1.38629 1.38629 1.38629 1.38629
8525 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8526 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
8527 1.38629 1.38629 1.38629 1.38629
8528 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8529 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
8530 1.38629 1.38629 1.38629 1.38629
8531 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8532 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
8533 1.38629 1.38629 1.38629 1.38629
8534 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8535 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
8536 1.38629 1.38629 1.38629 1.38629
8537 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8538 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
8539 1.38629 1.38629 1.38629 1.38629
8540 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8541 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
8542 1.38629 1.38629 1.38629 1.38629
8543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8544 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
8545 1.38629 1.38629 1.38629 1.38629
8546 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8547 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
8548 1.38629 1.38629 1.38629 1.38629
8549 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8550 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
8551 1.38629 1.38629 1.38629 1.38629
8552 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8553 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
8554 1.38629 1.38629 1.38629 1.38629
8555 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8556 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
8557 1.38629 1.38629 1.38629 1.38629
8558 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8559 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
8560 1.38629 1.38629 1.38629 1.38629
8561 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
8562 //
8563 HMMER3/f [3.2.1 | June 2018]
8564 NAME long.36.aln
8565 LENG 70
8566 MAXL 160
8567 ALPH DNA
8568 RF no
8569 MM no
8570 CONS yes
8571 CS no
8572 MAP yes
8573 DATE Tue May 28 13:12:04 2019
8574 NSEQ 2
8575 EFFN 2.000000
8576 CKSUM 1016574008
8577 STATS LOCAL MSV -8.2092 0.72204
8578 STATS LOCAL VITERBI -9.4140 0.72204
8579 STATS LOCAL FORWARD -3.0300 0.72204
8580 HMM A C G T
8581 m->m m->i m->d i->m i->i d->m d->d
8582 COMPO 1.41176 1.31197 1.75905 1.15585
8583 1.38629 1.38629 1.38629 1.38629
8584 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
8585 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
8586 1.38629 1.38629 1.38629 1.38629
8587 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8588 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
8589 1.38629 1.38629 1.38629 1.38629
8590 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8591 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
8592 1.38629 1.38629 1.38629 1.38629
8593 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8594 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
8595 1.38629 1.38629 1.38629 1.38629
8596 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8597 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
8598 1.38629 1.38629 1.38629 1.38629
8599 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8600 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
8601 1.38629 1.38629 1.38629 1.38629
8602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8603 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
8604 1.38629 1.38629 1.38629 1.38629
8605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8606 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
8607 1.38629 1.38629 1.38629 1.38629
8608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8609 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
8610 1.38629 1.38629 1.38629 1.38629
8611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8612 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
8613 1.38629 1.38629 1.38629 1.38629
8614 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8615 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
8616 1.38629 1.38629 1.38629 1.38629
8617 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8618 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
8619 1.38629 1.38629 1.38629 1.38629
8620 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8621 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
8622 1.38629 1.38629 1.38629 1.38629
8623 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8624 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
8625 1.38629 1.38629 1.38629 1.38629
8626 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8627 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
8628 1.38629 1.38629 1.38629 1.38629
8629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8630 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
8631 1.38629 1.38629 1.38629 1.38629
8632 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8633 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
8634 1.38629 1.38629 1.38629 1.38629
8635 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8636 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
8637 1.38629 1.38629 1.38629 1.38629
8638 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8639 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
8640 1.38629 1.38629 1.38629 1.38629
8641 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8642 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
8643 1.38629 1.38629 1.38629 1.38629
8644 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8645 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
8646 1.38629 1.38629 1.38629 1.38629
8647 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8648 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
8649 1.38629 1.38629 1.38629 1.38629
8650 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8651 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
8652 1.38629 1.38629 1.38629 1.38629
8653 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8654 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
8655 1.38629 1.38629 1.38629 1.38629
8656 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8657 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
8658 1.38629 1.38629 1.38629 1.38629
8659 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8660 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
8661 1.38629 1.38629 1.38629 1.38629
8662 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8663 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
8664 1.38629 1.38629 1.38629 1.38629
8665 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8666 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
8667 1.38629 1.38629 1.38629 1.38629
8668 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8669 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
8670 1.38629 1.38629 1.38629 1.38629
8671 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8672 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
8673 1.38629 1.38629 1.38629 1.38629
8674 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8675 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
8676 1.38629 1.38629 1.38629 1.38629
8677 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8678 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
8679 1.38629 1.38629 1.38629 1.38629
8680 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8681 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
8682 1.38629 1.38629 1.38629 1.38629
8683 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8684 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
8685 1.38629 1.38629 1.38629 1.38629
8686 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8687 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
8688 1.38629 1.38629 1.38629 1.38629
8689 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8690 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
8691 1.38629 1.38629 1.38629 1.38629
8692 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8693 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
8694 1.38629 1.38629 1.38629 1.38629
8695 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8696 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
8697 1.38629 1.38629 1.38629 1.38629
8698 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8699 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
8700 1.38629 1.38629 1.38629 1.38629
8701 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8702 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
8703 1.38629 1.38629 1.38629 1.38629
8704 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8705 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
8706 1.38629 1.38629 1.38629 1.38629
8707 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8708 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
8709 1.38629 1.38629 1.38629 1.38629
8710 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8711 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
8712 1.38629 1.38629 1.38629 1.38629
8713 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8714 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
8715 1.38629 1.38629 1.38629 1.38629
8716 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8717 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
8718 1.38629 1.38629 1.38629 1.38629
8719 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8720 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
8721 1.38629 1.38629 1.38629 1.38629
8722 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8723 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
8724 1.38629 1.38629 1.38629 1.38629
8725 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8726 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
8727 1.38629 1.38629 1.38629 1.38629
8728 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8729 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
8730 1.38629 1.38629 1.38629 1.38629
8731 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8732 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
8733 1.38629 1.38629 1.38629 1.38629
8734 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8735 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
8736 1.38629 1.38629 1.38629 1.38629
8737 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8738 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
8739 1.38629 1.38629 1.38629 1.38629
8740 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8741 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
8742 1.38629 1.38629 1.38629 1.38629
8743 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8744 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
8745 1.38629 1.38629 1.38629 1.38629
8746 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8747 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
8748 1.38629 1.38629 1.38629 1.38629
8749 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8750 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
8751 1.38629 1.38629 1.38629 1.38629
8752 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8753 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
8754 1.38629 1.38629 1.38629 1.38629
8755 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8756 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
8757 1.38629 1.38629 1.38629 1.38629
8758 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8759 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
8760 1.38629 1.38629 1.38629 1.38629
8761 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8762 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
8763 1.38629 1.38629 1.38629 1.38629
8764 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8765 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
8766 1.38629 1.38629 1.38629 1.38629
8767 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8768 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
8769 1.38629 1.38629 1.38629 1.38629
8770 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8771 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
8772 1.38629 1.38629 1.38629 1.38629
8773 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8774 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
8775 1.38629 1.38629 1.38629 1.38629
8776 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8777 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
8778 1.38629 1.38629 1.38629 1.38629
8779 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8780 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
8781 1.38629 1.38629 1.38629 1.38629
8782 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8783 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
8784 1.38629 1.38629 1.38629 1.38629
8785 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8786 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
8787 1.38629 1.38629 1.38629 1.38629
8788 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8789 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
8790 1.38629 1.38629 1.38629 1.38629
8791 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8792 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
8793 1.38629 1.38629 1.38629 1.38629
8794 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
8795 //
8796 HMMER3/f [3.2.1 | June 2018]
8797 NAME long.37.aln
8798 LENG 70
8799 MAXL 160
8800 ALPH DNA
8801 RF no
8802 MM no
8803 CONS yes
8804 CS no
8805 MAP yes
8806 DATE Tue May 28 13:12:04 2019
8807 NSEQ 2
8808 EFFN 2.000000
8809 CKSUM 1060708763
8810 STATS LOCAL MSV -8.1362 0.72159
8811 STATS LOCAL VITERBI -9.1995 0.72159
8812 STATS LOCAL FORWARD -3.7336 0.72159
8813 HMM A C G T
8814 m->m m->i m->d i->m i->i d->m d->d
8815 COMPO 1.34496 1.34940 1.66131 1.23731
8816 1.38629 1.38629 1.38629 1.38629
8817 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
8818 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
8819 1.38629 1.38629 1.38629 1.38629
8820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8821 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
8822 1.38629 1.38629 1.38629 1.38629
8823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8824 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
8825 1.38629 1.38629 1.38629 1.38629
8826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8827 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
8828 1.38629 1.38629 1.38629 1.38629
8829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8830 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
8831 1.38629 1.38629 1.38629 1.38629
8832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8833 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
8834 1.38629 1.38629 1.38629 1.38629
8835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8836 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
8837 1.38629 1.38629 1.38629 1.38629
8838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8839 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
8840 1.38629 1.38629 1.38629 1.38629
8841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8842 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
8843 1.38629 1.38629 1.38629 1.38629
8844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8845 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
8846 1.38629 1.38629 1.38629 1.38629
8847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8848 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
8849 1.38629 1.38629 1.38629 1.38629
8850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8851 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
8852 1.38629 1.38629 1.38629 1.38629
8853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8854 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
8855 1.38629 1.38629 1.38629 1.38629
8856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8857 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
8858 1.38629 1.38629 1.38629 1.38629
8859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8860 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
8861 1.38629 1.38629 1.38629 1.38629
8862 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8863 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
8864 1.38629 1.38629 1.38629 1.38629
8865 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8866 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
8867 1.38629 1.38629 1.38629 1.38629
8868 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8869 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
8870 1.38629 1.38629 1.38629 1.38629
8871 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8872 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
8873 1.38629 1.38629 1.38629 1.38629
8874 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8875 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
8876 1.38629 1.38629 1.38629 1.38629
8877 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8878 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
8879 1.38629 1.38629 1.38629 1.38629
8880 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8881 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
8882 1.38629 1.38629 1.38629 1.38629
8883 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8884 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
8885 1.38629 1.38629 1.38629 1.38629
8886 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8887 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
8888 1.38629 1.38629 1.38629 1.38629
8889 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8890 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
8891 1.38629 1.38629 1.38629 1.38629
8892 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8893 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
8894 1.38629 1.38629 1.38629 1.38629
8895 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8896 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
8897 1.38629 1.38629 1.38629 1.38629
8898 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8899 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
8900 1.38629 1.38629 1.38629 1.38629
8901 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8902 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
8903 1.38629 1.38629 1.38629 1.38629
8904 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8905 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
8906 1.38629 1.38629 1.38629 1.38629
8907 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8908 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
8909 1.38629 1.38629 1.38629 1.38629
8910 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8911 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
8912 1.38629 1.38629 1.38629 1.38629
8913 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8914 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
8915 1.38629 1.38629 1.38629 1.38629
8916 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8917 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
8918 1.38629 1.38629 1.38629 1.38629
8919 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8920 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
8921 1.38629 1.38629 1.38629 1.38629
8922 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8923 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
8924 1.38629 1.38629 1.38629 1.38629
8925 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8926 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
8927 1.38629 1.38629 1.38629 1.38629
8928 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8929 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
8930 1.38629 1.38629 1.38629 1.38629
8931 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8932 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
8933 1.38629 1.38629 1.38629 1.38629
8934 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8935 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
8936 1.38629 1.38629 1.38629 1.38629
8937 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8938 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
8939 1.38629 1.38629 1.38629 1.38629
8940 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8941 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
8942 1.38629 1.38629 1.38629 1.38629
8943 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8944 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
8945 1.38629 1.38629 1.38629 1.38629
8946 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8947 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
8948 1.38629 1.38629 1.38629 1.38629
8949 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8950 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
8951 1.38629 1.38629 1.38629 1.38629
8952 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8953 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
8954 1.38629 1.38629 1.38629 1.38629
8955 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8956 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
8957 1.38629 1.38629 1.38629 1.38629
8958 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8959 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
8960 1.38629 1.38629 1.38629 1.38629
8961 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8962 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
8963 1.38629 1.38629 1.38629 1.38629
8964 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8965 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
8966 1.38629 1.38629 1.38629 1.38629
8967 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8968 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
8969 1.38629 1.38629 1.38629 1.38629
8970 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8971 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
8972 1.38629 1.38629 1.38629 1.38629
8973 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8974 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
8975 1.38629 1.38629 1.38629 1.38629
8976 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8977 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
8978 1.38629 1.38629 1.38629 1.38629
8979 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8980 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
8981 1.38629 1.38629 1.38629 1.38629
8982 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8983 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
8984 1.38629 1.38629 1.38629 1.38629
8985 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8986 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
8987 1.38629 1.38629 1.38629 1.38629
8988 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8989 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
8990 1.38629 1.38629 1.38629 1.38629
8991 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8992 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
8993 1.38629 1.38629 1.38629 1.38629
8994 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8995 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
8996 1.38629 1.38629 1.38629 1.38629
8997 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8998 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
8999 1.38629 1.38629 1.38629 1.38629
9000 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9001 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
9002 1.38629 1.38629 1.38629 1.38629
9003 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9004 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
9005 1.38629 1.38629 1.38629 1.38629
9006 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9007 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
9008 1.38629 1.38629 1.38629 1.38629
9009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9010 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
9011 1.38629 1.38629 1.38629 1.38629
9012 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9013 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
9014 1.38629 1.38629 1.38629 1.38629
9015 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9016 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
9017 1.38629 1.38629 1.38629 1.38629
9018 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9019 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
9020 1.38629 1.38629 1.38629 1.38629
9021 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9022 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
9023 1.38629 1.38629 1.38629 1.38629
9024 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9025 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
9026 1.38629 1.38629 1.38629 1.38629
9027 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
9028 //
9029 HMMER3/f [3.2.1 | June 2018]
9030 NAME long.38.aln
9031 LENG 74
9032 MAXL 165
9033 ALPH DNA
9034 RF no
9035 MM no
9036 CONS yes
9037 CS no
9038 MAP yes
9039 DATE Tue May 28 13:12:04 2019
9040 NSEQ 2
9041 EFFN 2.000000
9042 CKSUM 1827060747
9043 STATS LOCAL MSV -8.2083 0.72255
9044 STATS LOCAL VITERBI -9.4166 0.72255
9045 STATS LOCAL FORWARD -3.6220 0.72255
9046 HMM A C G T
9047 m->m m->i m->d i->m i->i d->m d->d
9048 COMPO 1.72925 1.45913 1.16890 1.27499
9049 1.38629 1.38629 1.38629 1.38629
9050 0.33647 3.73767 1.33977 1.46634 0.26236 0.00000 *
9051 1 1.91091 1.78233 1.95844 0.61114 1 t - - -
9052 1.38629 1.38629 1.38629 1.38629
9053 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9054 2 1.91091 1.78233 1.95844 0.61114 2 t - - -
9055 1.38629 1.38629 1.38629 1.38629
9056 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9057 3 1.98342 0.60779 2.04641 1.66785 3 c - - -
9058 1.38629 1.38629 1.38629 1.38629
9059 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9060 4 1.91091 1.78233 1.95844 0.61114 4 t - - -
9061 1.38629 1.38629 1.38629 1.38629
9062 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
9063 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
9064 1.38629 1.38629 1.38629 1.38629
9065 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9066 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
9067 1.38629 1.38629 1.38629 1.38629
9068 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9069 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
9070 1.38629 1.38629 1.38629 1.38629
9071 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9072 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
9073 1.38629 1.38629 1.38629 1.38629
9074 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9075 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
9076 1.38629 1.38629 1.38629 1.38629
9077 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9078 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
9079 1.38629 1.38629 1.38629 1.38629
9080 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9081 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
9082 1.38629 1.38629 1.38629 1.38629
9083 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9084 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
9085 1.38629 1.38629 1.38629 1.38629
9086 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9087 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
9088 1.38629 1.38629 1.38629 1.38629
9089 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9090 14 1.09289 1.89038 1.88803 1.01509 14 t - - -
9091 1.38629 1.38629 1.38629 1.38629
9092 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9093 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
9094 1.38629 1.38629 1.38629 1.38629
9095 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9096 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
9097 1.38629 1.38629 1.38629 1.38629
9098 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9099 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
9100 1.38629 1.38629 1.38629 1.38629
9101 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9102 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
9103 1.38629 1.38629 1.38629 1.38629
9104 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9105 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
9106 1.38629 1.38629 1.38629 1.38629
9107 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9108 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
9109 1.38629 1.38629 1.38629 1.38629
9110 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9111 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
9112 1.38629 1.38629 1.38629 1.38629
9113 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9114 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
9115 1.38629 1.38629 1.38629 1.38629
9116 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9117 23 1.88401 1.14290 1.03416 1.75097 23 g - - -
9118 1.38629 1.38629 1.38629 1.38629
9119 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9120 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
9121 1.38629 1.38629 1.38629 1.38629
9122 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9123 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
9124 1.38629 1.38629 1.38629 1.38629
9125 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9126 26 1.88401 1.14290 1.03416 1.75097 26 g - - -
9127 1.38629 1.38629 1.38629 1.38629
9128 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9129 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
9130 1.38629 1.38629 1.38629 1.38629
9131 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9132 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
9133 1.38629 1.38629 1.38629 1.38629
9134 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9135 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
9136 1.38629 1.38629 1.38629 1.38629
9137 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9138 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
9139 1.38629 1.38629 1.38629 1.38629
9140 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9141 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
9142 1.38629 1.38629 1.38629 1.38629
9143 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9144 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
9145 1.38629 1.38629 1.38629 1.38629
9146 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9147 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
9148 1.38629 1.38629 1.38629 1.38629
9149 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9150 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
9151 1.38629 1.38629 1.38629 1.38629
9152 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9153 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
9154 1.38629 1.38629 1.38629 1.38629
9155 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9156 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
9157 1.38629 1.38629 1.38629 1.38629
9158 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9159 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
9160 1.38629 1.38629 1.38629 1.38629
9161 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9162 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
9163 1.38629 1.38629 1.38629 1.38629
9164 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9165 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
9166 1.38629 1.38629 1.38629 1.38629
9167 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9168 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
9169 1.38629 1.38629 1.38629 1.38629
9170 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9171 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
9172 1.38629 1.38629 1.38629 1.38629
9173 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9174 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
9175 1.38629 1.38629 1.38629 1.38629
9176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9177 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
9178 1.38629 1.38629 1.38629 1.38629
9179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9180 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
9181 1.38629 1.38629 1.38629 1.38629
9182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9183 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
9184 1.38629 1.38629 1.38629 1.38629
9185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9186 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
9187 1.38629 1.38629 1.38629 1.38629
9188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9189 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
9190 1.38629 1.38629 1.38629 1.38629
9191 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9192 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
9193 1.38629 1.38629 1.38629 1.38629
9194 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9195 49 1.84050 1.95342 1.03654 1.06480 49 g - - -
9196 1.38629 1.38629 1.38629 1.38629
9197 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9198 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
9199 1.38629 1.38629 1.38629 1.38629
9200 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9201 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
9202 1.38629 1.38629 1.38629 1.38629
9203 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9204 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
9205 1.38629 1.38629 1.38629 1.38629
9206 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9207 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
9208 1.38629 1.38629 1.38629 1.38629
9209 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9210 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
9211 1.38629 1.38629 1.38629 1.38629
9212 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9213 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
9214 1.38629 1.38629 1.38629 1.38629
9215 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9216 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
9217 1.38629 1.38629 1.38629 1.38629
9218 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9219 57 1.09289 1.89038 1.88803 1.01509 57 t - - -
9220 1.38629 1.38629 1.38629 1.38629
9221 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9222 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
9223 1.38629 1.38629 1.38629 1.38629
9224 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9225 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
9226 1.38629 1.38629 1.38629 1.38629
9227 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9228 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
9229 1.38629 1.38629 1.38629 1.38629
9230 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9231 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
9232 1.38629 1.38629 1.38629 1.38629
9233 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9234 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
9235 1.38629 1.38629 1.38629 1.38629
9236 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9237 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
9238 1.38629 1.38629 1.38629 1.38629
9239 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9240 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
9241 1.38629 1.38629 1.38629 1.38629
9242 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9243 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
9244 1.38629 1.38629 1.38629 1.38629
9245 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9246 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
9247 1.38629 1.38629 1.38629 1.38629
9248 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9249 67 2.38910 2.82844 0.25233 2.62837 67 g - - -
9250 1.38629 1.38629 1.38629 1.38629
9251 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9252 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
9253 1.38629 1.38629 1.38629 1.38629
9254 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9255 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
9256 1.38629 1.38629 1.38629 1.38629
9257 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9258 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
9259 1.38629 1.38629 1.38629 1.38629
9260 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
9261 71 1.91091 1.78233 1.95844 0.61114 71 t - - -
9262 1.38629 1.38629 1.38629 1.38629
9263 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9264 72 1.97267 2.25870 0.46443 2.05625 72 g - - -
9265 1.38629 1.38629 1.38629 1.38629
9266 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9267 73 1.98342 0.60779 2.04641 1.66785 73 c - - -
9268 1.38629 1.38629 1.38629 1.38629
9269 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9270 74 1.91091 1.78233 1.95844 0.61114 74 t - - -
9271 1.38629 1.38629 1.38629 1.38629
9272 0.03279 3.43399 * 1.46634 0.26236 0.00000 *
9273 //
9274 HMMER3/f [3.2.1 | June 2018]
9275 NAME long.39.aln
9276 LENG 99
9277 MAXL 200
9278 ALPH DNA
9279 RF no
9280 MM no
9281 CONS yes
9282 CS no
9283 MAP yes
9284 DATE Tue May 28 13:12:03 2019
9285 NSEQ 2
9286 EFFN 2.000000
9287 CKSUM 3832268543
9288 STATS LOCAL MSV -9.7613 0.73289
9289 STATS LOCAL VITERBI -11.5188 0.73289
9290 STATS LOCAL FORWARD -2.6614 0.73289
9291 HMM A C G T
9292 m->m m->i m->d i->m i->i d->m d->d
9293 COMPO 1.28054 1.52683 1.53556 1.23942
9294 1.38629 1.38629 1.38629 1.38629
9295 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
9296 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
9297 1.38629 1.38629 1.38629 1.38629
9298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9299 2 1.12273 2.17004 0.88086 1.92408 2 g - - -
9300 1.38629 1.38629 1.38629 1.38629
9301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9302 3 2.01896 1.01168 2.12953 0.95527 3 t - - -
9303 1.38629 1.38629 1.38629 1.38629
9304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9305 4 1.09289 1.89038 1.88803 1.01509 4 t - - -
9306 1.38629 1.38629 1.38629 1.38629
9307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9308 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
9309 1.38629 1.38629 1.38629 1.38629
9310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9311 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
9312 1.38629 1.38629 1.38629 1.38629
9313 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
9314 7 1.97267 2.25870 0.46443 2.05625 7 g - - -
9315 1.38629 1.38629 1.38629 1.38629
9316 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9317 8 0.56139 2.08489 1.86185 1.89791 8 a - - -
9318 1.38629 1.38629 1.38629 1.38629
9319 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9320 9 1.98342 0.60779 2.04641 1.66785 9 c - - -
9321 1.38629 1.38629 1.38629 1.38629
9322 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9323 10 1.97267 2.25870 0.46443 2.05625 10 g - - -
9324 1.38629 1.38629 1.38629 1.38629
9325 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9326 11 1.98342 0.60779 2.04641 1.66785 11 c - - -
9327 1.38629 1.38629 1.38629 1.38629
9328 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9329 12 0.56139 2.08489 1.86185 1.89791 12 a - - -
9330 1.38629 1.38629 1.38629 1.38629
9331 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9332 13 1.97267 2.25870 0.46443 2.05625 13 g - - -
9333 1.38629 1.38629 1.38629 1.38629
9334 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9335 14 0.56139 2.08489 1.86185 1.89791 14 a - - -
9336 1.38629 1.38629 1.38629 1.38629
9337 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9338 15 0.56139 2.08489 1.86185 1.89791 15 a - - -
9339 1.38629 1.38629 1.38629 1.38629
9340 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9341 16 1.97267 2.25870 0.46443 2.05625 16 g - - -
9342 1.38629 1.38629 1.38629 1.38629
9343 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9344 17 1.91091 1.78233 1.95844 0.61114 17 t - - -
9345 1.38629 1.38629 1.38629 1.38629
9346 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9347 18 1.91091 1.78233 1.95844 0.61114 18 t - - -
9348 1.38629 1.38629 1.38629 1.38629
9349 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9350 19 0.56139 2.08489 1.86185 1.89791 19 a - - -
9351 1.38629 1.38629 1.38629 1.38629
9352 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9353 20 1.91091 1.78233 1.95844 0.61114 20 t - - -
9354 1.38629 1.38629 1.38629 1.38629
9355 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9356 21 1.91091 1.78233 1.95844 0.61114 21 t - - -
9357 1.38629 1.38629 1.38629 1.38629
9358 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9359 22 1.98342 0.60779 2.04641 1.66785 22 c - - -
9360 1.38629 1.38629 1.38629 1.38629
9361 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9362 23 1.98342 0.60779 2.04641 1.66785 23 c - - -
9363 1.38629 1.38629 1.38629 1.38629
9364 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9365 24 0.56139 2.08489 1.86185 1.89791 24 a - - -
9366 1.38629 1.38629 1.38629 1.38629
9367 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9368 25 1.97267 2.25870 0.46443 2.05625 25 g - - -
9369 1.38629 1.38629 1.38629 1.38629
9370 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9371 26 1.98342 0.60779 2.04641 1.66785 26 c - - -
9372 1.38629 1.38629 1.38629 1.38629
9373 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9374 27 0.56139 2.08489 1.86185 1.89791 27 a - - -
9375 1.38629 1.38629 1.38629 1.38629
9376 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9377 28 1.91091 1.78233 1.95844 0.61114 28 t - - -
9378 1.38629 1.38629 1.38629 1.38629
9379 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9380 29 0.56139 2.08489 1.86185 1.89791 29 a - - -
9381 1.38629 1.38629 1.38629 1.38629
9382 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9383 30 1.98342 0.60779 2.04641 1.66785 30 c - - -
9384 1.38629 1.38629 1.38629 1.38629
9385 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9386 31 0.56139 2.08489 1.86185 1.89791 31 a - - -
9387 1.38629 1.38629 1.38629 1.38629
9388 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9389 32 1.98342 0.60779 2.04641 1.66785 32 c - - -
9390 1.38629 1.38629 1.38629 1.38629
9391 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9392 33 0.56139 2.08489 1.86185 1.89791 33 a - - -
9393 1.38629 1.38629 1.38629 1.38629
9394 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9395 34 1.97267 2.25870 0.46443 2.05625 34 g - - -
9396 1.38629 1.38629 1.38629 1.38629
9397 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9398 35 1.97267 2.25870 0.46443 2.05625 35 g - - -
9399 1.38629 1.38629 1.38629 1.38629
9400 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
9401 36 1.84050 1.95342 1.03654 1.06480 36 g - - -
9402 1.38629 1.38629 1.38629 1.38629
9403 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9404 37 2.01896 1.01168 2.12953 0.95527 37 t - - -
9405 1.38629 1.38629 1.38629 1.38629
9406 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9407 38 1.09289 1.89038 1.88803 1.01509 38 t - - -
9408 1.38629 1.38629 1.38629 1.38629
9409 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9410 39 1.84050 1.95342 1.03654 1.06480 39 g - - -
9411 1.38629 1.38629 1.38629 1.38629
9412 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9413 40 1.12273 2.17004 0.88086 1.92408 40 g - - -
9414 1.38629 1.38629 1.38629 1.38629
9415 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9416 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
9417 1.38629 1.38629 1.38629 1.38629
9418 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9419 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
9420 1.38629 1.38629 1.38629 1.38629
9421 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9422 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
9423 1.38629 1.38629 1.38629 1.38629
9424 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9425 44 1.88401 1.14290 1.03416 1.75097 44 g - - -
9426 1.38629 1.38629 1.38629 1.38629
9427 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9428 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
9429 1.38629 1.38629 1.38629 1.38629
9430 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9431 46 1.88401 1.14290 1.03416 1.75097 46 g - - -
9432 1.38629 1.38629 1.38629 1.38629
9433 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9434 47 1.08498 1.08670 1.94700 1.70340 47 a - - -
9435 1.38629 1.38629 1.38629 1.38629
9436 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9437 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
9438 1.38629 1.38629 1.38629 1.38629
9439 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9440 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
9441 1.38629 1.38629 1.38629 1.38629
9442 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9443 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
9444 1.38629 1.38629 1.38629 1.38629
9445 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9446 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
9447 1.38629 1.38629 1.38629 1.38629
9448 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9449 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
9450 1.38629 1.38629 1.38629 1.38629
9451 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9452 53 2.01896 1.01168 2.12953 0.95527 53 t - - -
9453 1.38629 1.38629 1.38629 1.38629
9454 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9455 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
9456 1.38629 1.38629 1.38629 1.38629
9457 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9458 55 1.88401 1.14290 1.03416 1.75097 55 g - - -
9459 1.38629 1.38629 1.38629 1.38629
9460 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9461 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
9462 1.38629 1.38629 1.38629 1.38629
9463 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9464 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
9465 1.38629 1.38629 1.38629 1.38629
9466 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9467 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
9468 1.38629 1.38629 1.38629 1.38629
9469 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9470 59 2.01896 1.01168 2.12953 0.95527 59 t - - -
9471 1.38629 1.38629 1.38629 1.38629
9472 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9473 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
9474 1.38629 1.38629 1.38629 1.38629
9475 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9476 61 1.09289 1.89038 1.88803 1.01509 61 t - - -
9477 1.38629 1.38629 1.38629 1.38629
9478 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9479 62 1.12273 2.17004 0.88086 1.92408 62 g - - -
9480 1.38629 1.38629 1.38629 1.38629
9481 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9482 63 1.08498 1.08670 1.94700 1.70340 63 a - - -
9483 1.38629 1.38629 1.38629 1.38629
9484 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9485 64 2.01896 1.01168 2.12953 0.95527 64 t - - -
9486 1.38629 1.38629 1.38629 1.38629
9487 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9488 65 2.01896 1.01168 2.12953 0.95527 65 t - - -
9489 1.38629 1.38629 1.38629 1.38629
9490 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9491 66 1.09289 1.89038 1.88803 1.01509 66 t - - -
9492 1.38629 1.38629 1.38629 1.38629
9493 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9494 67 2.38910 2.82844 0.25233 2.62837 67 g - - -
9495 1.38629 1.38629 1.38629 1.38629
9496 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
9497 68 1.91091 1.78233 1.95844 0.61114 68 t - - -
9498 1.38629 1.38629 1.38629 1.38629
9499 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9500 69 1.91091 1.78233 1.95844 0.61114 69 t - - -
9501 1.38629 1.38629 1.38629 1.38629
9502 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9503 70 1.91091 1.78233 1.95844 0.61114 70 t - - -
9504 1.38629 1.38629 1.38629 1.38629
9505 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9506 71 1.98342 0.60779 2.04641 1.66785 71 c - - -
9507 1.38629 1.38629 1.38629 1.38629
9508 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9509 72 1.91091 1.78233 1.95844 0.61114 72 t - - -
9510 1.38629 1.38629 1.38629 1.38629
9511 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9512 73 1.97267 2.25870 0.46443 2.05625 73 g - - -
9513 1.38629 1.38629 1.38629 1.38629
9514 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9515 74 1.98342 0.60779 2.04641 1.66785 74 c - - -
9516 1.38629 1.38629 1.38629 1.38629
9517 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9518 75 1.91091 1.78233 1.95844 0.61114 75 t - - -
9519 1.38629 1.38629 1.38629 1.38629
9520 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9521 76 1.97267 2.25870 0.46443 2.05625 76 g - - -
9522 1.38629 1.38629 1.38629 1.38629
9523 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9524 77 1.97267 2.25870 0.46443 2.05625 77 g - - -
9525 1.38629 1.38629 1.38629 1.38629
9526 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9527 78 0.56139 2.08489 1.86185 1.89791 78 a - - -
9528 1.38629 1.38629 1.38629 1.38629
9529 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9530 79 0.56139 2.08489 1.86185 1.89791 79 a - - -
9531 1.38629 1.38629 1.38629 1.38629
9532 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9533 80 1.91091 1.78233 1.95844 0.61114 80 t - - -
9534 1.38629 1.38629 1.38629 1.38629
9535 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9536 81 0.56139 2.08489 1.86185 1.89791 81 a - - -
9537 1.38629 1.38629 1.38629 1.38629
9538 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9539 82 0.56139 2.08489 1.86185 1.89791 82 a - - -
9540 1.38629 1.38629 1.38629 1.38629
9541 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9542 83 1.98342 0.60779 2.04641 1.66785 83 c - - -
9543 1.38629 1.38629 1.38629 1.38629
9544 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9545 84 1.91091 1.78233 1.95844 0.61114 84 t - - -
9546 1.38629 1.38629 1.38629 1.38629
9547 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9548 85 1.91091 1.78233 1.95844 0.61114 85 t - - -
9549 1.38629 1.38629 1.38629 1.38629
9550 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9551 86 1.98342 0.60779 2.04641 1.66785 86 c - - -
9552 1.38629 1.38629 1.38629 1.38629
9553 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9554 87 1.91091 1.78233 1.95844 0.61114 87 t - - -
9555 1.38629 1.38629 1.38629 1.38629
9556 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9557 88 1.97267 2.25870 0.46443 2.05625 88 g - - -
9558 1.38629 1.38629 1.38629 1.38629
9559 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9560 89 1.98342 0.60779 2.04641 1.66785 89 c - - -
9561 1.38629 1.38629 1.38629 1.38629
9562 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9563 90 1.91091 1.78233 1.95844 0.61114 90 t - - -
9564 1.38629 1.38629 1.38629 1.38629
9565 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9566 91 1.91091 1.78233 1.95844 0.61114 91 t - - -
9567 1.38629 1.38629 1.38629 1.38629
9568 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9569 92 1.98342 0.60779 2.04641 1.66785 92 c - - -
9570 1.38629 1.38629 1.38629 1.38629
9571 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9572 93 1.91091 1.78233 1.95844 0.61114 93 t - - -
9573 1.38629 1.38629 1.38629 1.38629
9574 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9575 94 0.56139 2.08489 1.86185 1.89791 94 a - - -
9576 1.38629 1.38629 1.38629 1.38629
9577 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9578 95 1.91091 1.78233 1.95844 0.61114 95 t - - -
9579 1.38629 1.38629 1.38629 1.38629
9580 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9581 96 0.56139 2.08489 1.86185 1.89791 96 a - - -
9582 1.38629 1.38629 1.38629 1.38629
9583 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
9584 97 2.01896 1.01168 2.12953 0.95527 97 t - - -
9585 1.38629 1.38629 1.38629 1.38629
9586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9587 98 0.28818 2.60848 2.42319 2.42940 98 a - - -
9588 1.38629 1.38629 1.38629 1.38629
9589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9590 99 1.84050 1.95342 1.03654 1.06480 99 g - - -
9591 1.38629 1.38629 1.38629 1.38629
9592 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
9593 //
9594 HMMER3/f [3.2.1 | June 2018]
9595 NAME long.40.aln
9596 LENG 85
9597 MAXL 180
9598 ALPH DNA
9599 RF no
9600 MM no
9601 CONS yes
9602 CS no
9603 MAP yes
9604 DATE Tue May 28 13:12:03 2019
9605 NSEQ 2
9606 EFFN 2.000000
9607 CKSUM 850921081
9608 STATS LOCAL MSV -9.2442 0.73770
9609 STATS LOCAL VITERBI -10.9061 0.73770
9610 STATS LOCAL FORWARD -3.0276 0.73770
9611 HMM A C G T
9612 m->m m->i m->d i->m i->i d->m d->d
9613 COMPO 1.34684 1.48715 1.41637 1.30441
9614 1.38629 1.38629 1.38629 1.38629
9615 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
9616 1 1.09289 1.89038 1.88803 1.01509 1 t - - -
9617 1.38629 1.38629 1.38629 1.38629
9618 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9619 2 1.84050 1.95342 1.03654 1.06480 2 g - - -
9620 1.38629 1.38629 1.38629 1.38629
9621 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9622 3 1.84050 1.95342 1.03654 1.06480 3 g - - -
9623 1.38629 1.38629 1.38629 1.38629
9624 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9625 4 1.09289 1.89038 1.88803 1.01509 4 t - - -
9626 1.38629 1.38629 1.38629 1.38629
9627 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9628 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
9629 1.38629 1.38629 1.38629 1.38629
9630 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9631 6 2.01896 1.01168 2.12953 0.95527 6 t - - -
9632 1.38629 1.38629 1.38629 1.38629
9633 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9634 7 1.12273 2.17004 0.88086 1.92408 7 g - - -
9635 1.38629 1.38629 1.38629 1.38629
9636 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
9637 8 1.98342 0.60779 2.04641 1.66785 8 c - - -
9638 1.38629 1.38629 1.38629 1.38629
9639 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9640 9 1.98342 0.60779 2.04641 1.66785 9 c - - -
9641 1.38629 1.38629 1.38629 1.38629
9642 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9643 10 1.91091 1.78233 1.95844 0.61114 10 t - - -
9644 1.38629 1.38629 1.38629 1.38629
9645 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9646 11 1.98342 0.60779 2.04641 1.66785 11 c - - -
9647 1.38629 1.38629 1.38629 1.38629
9648 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9649 12 0.56139 2.08489 1.86185 1.89791 12 a - - -
9650 1.38629 1.38629 1.38629 1.38629
9651 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9652 13 1.97267 2.25870 0.46443 2.05625 13 g - - -
9653 1.38629 1.38629 1.38629 1.38629
9654 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9655 14 1.91091 1.78233 1.95844 0.61114 14 t - - -
9656 1.38629 1.38629 1.38629 1.38629
9657 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9658 15 1.98342 0.60779 2.04641 1.66785 15 c - - -
9659 1.38629 1.38629 1.38629 1.38629
9660 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9661 16 0.56139 2.08489 1.86185 1.89791 16 a - - -
9662 1.38629 1.38629 1.38629 1.38629
9663 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9664 17 1.91091 1.78233 1.95844 0.61114 17 t - - -
9665 1.38629 1.38629 1.38629 1.38629
9666 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9667 18 1.91091 1.78233 1.95844 0.61114 18 t - - -
9668 1.38629 1.38629 1.38629 1.38629
9669 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9670 19 0.56139 2.08489 1.86185 1.89791 19 a - - -
9671 1.38629 1.38629 1.38629 1.38629
9672 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9673 20 1.98342 0.60779 2.04641 1.66785 20 c - - -
9674 1.38629 1.38629 1.38629 1.38629
9675 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9676 21 0.56139 2.08489 1.86185 1.89791 21 a - - -
9677 1.38629 1.38629 1.38629 1.38629
9678 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9679 22 1.98342 0.60779 2.04641 1.66785 22 c - - -
9680 1.38629 1.38629 1.38629 1.38629
9681 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
9682 23 1.12273 2.17004 0.88086 1.92408 23 g - - -
9683 1.38629 1.38629 1.38629 1.38629
9684 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9685 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
9686 1.38629 1.38629 1.38629 1.38629
9687 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9688 25 1.12273 2.17004 0.88086 1.92408 25 g - - -
9689 1.38629 1.38629 1.38629 1.38629
9690 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9691 26 1.08498 1.08670 1.94700 1.70340 26 a - - -
9692 1.38629 1.38629 1.38629 1.38629
9693 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9694 27 2.01896 1.01168 2.12953 0.95527 27 t - - -
9695 1.38629 1.38629 1.38629 1.38629
9696 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9697 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
9698 1.38629 1.38629 1.38629 1.38629
9699 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9700 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
9701 1.38629 1.38629 1.38629 1.38629
9702 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9703 30 1.84050 1.95342 1.03654 1.06480 30 g - - -
9704 1.38629 1.38629 1.38629 1.38629
9705 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9706 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
9707 1.38629 1.38629 1.38629 1.38629
9708 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9709 32 2.01896 1.01168 2.12953 0.95527 32 t - - -
9710 1.38629 1.38629 1.38629 1.38629
9711 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9712 33 1.12273 2.17004 0.88086 1.92408 33 g - - -
9713 1.38629 1.38629 1.38629 1.38629
9714 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9715 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
9716 1.38629 1.38629 1.38629 1.38629
9717 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9718 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
9719 1.38629 1.38629 1.38629 1.38629
9720 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9721 36 1.12273 2.17004 0.88086 1.92408 36 g - - -
9722 1.38629 1.38629 1.38629 1.38629
9723 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9724 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
9725 1.38629 1.38629 1.38629 1.38629
9726 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9727 38 1.84050 1.95342 1.03654 1.06480 38 g - - -
9728 1.38629 1.38629 1.38629 1.38629
9729 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9730 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
9731 1.38629 1.38629 1.38629 1.38629
9732 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9733 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
9734 1.38629 1.38629 1.38629 1.38629
9735 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9736 41 1.08498 1.08670 1.94700 1.70340 41 a - - -
9737 1.38629 1.38629 1.38629 1.38629
9738 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9739 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
9740 1.38629 1.38629 1.38629 1.38629
9741 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9742 43 2.01896 1.01168 2.12953 0.95527 43 t - - -
9743 1.38629 1.38629 1.38629 1.38629
9744 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9745 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
9746 1.38629 1.38629 1.38629 1.38629
9747 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9748 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
9749 1.38629 1.38629 1.38629 1.38629
9750 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9751 46 1.84050 1.95342 1.03654 1.06480 46 g - - -
9752 1.38629 1.38629 1.38629 1.38629
9753 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9754 47 1.12273 2.17004 0.88086 1.92408 47 g - - -
9755 1.38629 1.38629 1.38629 1.38629
9756 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9757 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
9758 1.38629 1.38629 1.38629 1.38629
9759 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9760 49 1.08498 1.08670 1.94700 1.70340 49 a - - -
9761 1.38629 1.38629 1.38629 1.38629
9762 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9763 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
9764 1.38629 1.38629 1.38629 1.38629
9765 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9766 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
9767 1.38629 1.38629 1.38629 1.38629
9768 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9769 52 1.12273 2.17004 0.88086 1.92408 52 g - - -
9770 1.38629 1.38629 1.38629 1.38629
9771 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9772 53 1.84050 1.95342 1.03654 1.06480 53 g - - -
9773 1.38629 1.38629 1.38629 1.38629
9774 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9775 54 2.01896 1.01168 2.12953 0.95527 54 t - - -
9776 1.38629 1.38629 1.38629 1.38629
9777 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9778 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
9779 1.38629 1.38629 1.38629 1.38629
9780 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9781 56 2.01896 1.01168 2.12953 0.95527 56 t - - -
9782 1.38629 1.38629 1.38629 1.38629
9783 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9784 57 1.88401 1.14290 1.03416 1.75097 57 g - - -
9785 1.38629 1.38629 1.38629 1.38629
9786 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9787 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
9788 1.38629 1.38629 1.38629 1.38629
9789 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9790 59 1.84050 1.95342 1.03654 1.06480 59 g - - -
9791 1.38629 1.38629 1.38629 1.38629
9792 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9793 60 1.09289 1.89038 1.88803 1.01509 60 t - - -
9794 1.38629 1.38629 1.38629 1.38629
9795 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9796 61 1.08498 1.08670 1.94700 1.70340 61 a - - -
9797 1.38629 1.38629 1.38629 1.38629
9798 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9799 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
9800 1.38629 1.38629 1.38629 1.38629
9801 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9802 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
9803 1.38629 1.38629 1.38629 1.38629
9804 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9805 64 1.84050 1.95342 1.03654 1.06480 64 g - - -
9806 1.38629 1.38629 1.38629 1.38629
9807 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9808 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
9809 1.38629 1.38629 1.38629 1.38629
9810 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9811 66 2.01896 1.01168 2.12953 0.95527 66 t - - -
9812 1.38629 1.38629 1.38629 1.38629
9813 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9814 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
9815 1.38629 1.38629 1.38629 1.38629
9816 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9817 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
9818 1.38629 1.38629 1.38629 1.38629
9819 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9820 69 1.09289 1.89038 1.88803 1.01509 69 t - - -
9821 1.38629 1.38629 1.38629 1.38629
9822 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9823 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
9824 1.38629 1.38629 1.38629 1.38629
9825 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
9826 71 1.97267 2.25870 0.46443 2.05625 71 g - - -
9827 1.38629 1.38629 1.38629 1.38629
9828 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9829 72 1.91091 1.78233 1.95844 0.61114 72 t - - -
9830 1.38629 1.38629 1.38629 1.38629
9831 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9832 73 1.97267 2.25870 0.46443 2.05625 73 g - - -
9833 1.38629 1.38629 1.38629 1.38629
9834 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9835 74 1.91091 1.78233 1.95844 0.61114 74 t - - -
9836 1.38629 1.38629 1.38629 1.38629
9837 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9838 75 1.91091 1.78233 1.95844 0.61114 75 t - - -
9839 1.38629 1.38629 1.38629 1.38629
9840 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9841 76 0.56139 2.08489 1.86185 1.89791 76 a - - -
9842 1.38629 1.38629 1.38629 1.38629
9843 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9844 77 1.98342 0.60779 2.04641 1.66785 77 c - - -
9845 1.38629 1.38629 1.38629 1.38629
9846 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9847 78 0.56139 2.08489 1.86185 1.89791 78 a - - -
9848 1.38629 1.38629 1.38629 1.38629
9849 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9850 79 0.56139 2.08489 1.86185 1.89791 79 a - - -
9851 1.38629 1.38629 1.38629 1.38629
9852 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9853 80 1.98342 0.60779 2.04641 1.66785 80 c - - -
9854 1.38629 1.38629 1.38629 1.38629
9855 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9856 81 1.91091 1.78233 1.95844 0.61114 81 t - - -
9857 1.38629 1.38629 1.38629 1.38629
9858 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9859 82 1.91091 1.78233 1.95844 0.61114 82 t - - -
9860 1.38629 1.38629 1.38629 1.38629
9861 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9862 83 1.97267 2.25870 0.46443 2.05625 83 g - - -
9863 1.38629 1.38629 1.38629 1.38629
9864 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9865 84 1.91091 1.78233 1.95844 0.61114 84 t - - -
9866 1.38629 1.38629 1.38629 1.38629
9867 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
9868 85 1.98342 0.60779 2.04641 1.66785 85 c - - -
9869 1.38629 1.38629 1.38629 1.38629
9870 0.03279 3.43399 * 1.46634 0.26236 0.00000 *
9871 //
9872 HMMER3/f [3.2.1 | June 2018]
9873 NAME long.41.aln
9874 LENG 70
9875 MAXL 160
9876 ALPH DNA
9877 RF no
9878 MM no
9879 CONS yes
9880 CS no
9881 MAP yes
9882 DATE Tue May 28 13:12:04 2019
9883 NSEQ 2
9884 EFFN 2.000000
9885 CKSUM 3655489519
9886 STATS LOCAL MSV -8.2137 0.71925
9887 STATS LOCAL VITERBI -9.4456 0.71925
9888 STATS LOCAL FORWARD -3.2467 0.71925
9889 HMM A C G T
9890 m->m m->i m->d i->m i->i d->m d->d
9891 COMPO 0.94751 1.95314 1.23648 1.71446
9892 1.38629 1.38629 1.38629 1.38629
9893 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
9894 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
9895 1.38629 1.38629 1.38629 1.38629
9896 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9897 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
9898 1.38629 1.38629 1.38629 1.38629
9899 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9900 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
9901 1.38629 1.38629 1.38629 1.38629
9902 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9903 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
9904 1.38629 1.38629 1.38629 1.38629
9905 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9906 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
9907 1.38629 1.38629 1.38629 1.38629
9908 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9909 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
9910 1.38629 1.38629 1.38629 1.38629
9911 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9912 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
9913 1.38629 1.38629 1.38629 1.38629
9914 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9915 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
9916 1.38629 1.38629 1.38629 1.38629
9917 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9918 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
9919 1.38629 1.38629 1.38629 1.38629
9920 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9921 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
9922 1.38629 1.38629 1.38629 1.38629
9923 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9924 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
9925 1.38629 1.38629 1.38629 1.38629
9926 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9927 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
9928 1.38629 1.38629 1.38629 1.38629
9929 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9930 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
9931 1.38629 1.38629 1.38629 1.38629
9932 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9933 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
9934 1.38629 1.38629 1.38629 1.38629
9935 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9936 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
9937 1.38629 1.38629 1.38629 1.38629
9938 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9939 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
9940 1.38629 1.38629 1.38629 1.38629
9941 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9942 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
9943 1.38629 1.38629 1.38629 1.38629
9944 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9945 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
9946 1.38629 1.38629 1.38629 1.38629
9947 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9948 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
9949 1.38629 1.38629 1.38629 1.38629
9950 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9951 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
9952 1.38629 1.38629 1.38629 1.38629
9953 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9954 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
9955 1.38629 1.38629 1.38629 1.38629
9956 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9957 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
9958 1.38629 1.38629 1.38629 1.38629
9959 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9960 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
9961 1.38629 1.38629 1.38629 1.38629
9962 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9963 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
9964 1.38629 1.38629 1.38629 1.38629
9965 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9966 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
9967 1.38629 1.38629 1.38629 1.38629
9968 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9969 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
9970 1.38629 1.38629 1.38629 1.38629
9971 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9972 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
9973 1.38629 1.38629 1.38629 1.38629
9974 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9975 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
9976 1.38629 1.38629 1.38629 1.38629
9977 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9978 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
9979 1.38629 1.38629 1.38629 1.38629
9980 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9981 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
9982 1.38629 1.38629 1.38629 1.38629
9983 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9984 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
9985 1.38629 1.38629 1.38629 1.38629
9986 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9987 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
9988 1.38629 1.38629 1.38629 1.38629
9989 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9990 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
9991 1.38629 1.38629 1.38629 1.38629
9992 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9993 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
9994 1.38629 1.38629 1.38629 1.38629
9995 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9996 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
9997 1.38629 1.38629 1.38629 1.38629
9998 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9999 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
10000 1.38629 1.38629 1.38629 1.38629
10001 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10002 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
10003 1.38629 1.38629 1.38629 1.38629
10004 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10005 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
10006 1.38629 1.38629 1.38629 1.38629
10007 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10008 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
10009 1.38629 1.38629 1.38629 1.38629
10010 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10011 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
10012 1.38629 1.38629 1.38629 1.38629
10013 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10014 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
10015 1.38629 1.38629 1.38629 1.38629
10016 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10017 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
10018 1.38629 1.38629 1.38629 1.38629
10019 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10020 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
10021 1.38629 1.38629 1.38629 1.38629
10022 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10023 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
10024 1.38629 1.38629 1.38629 1.38629
10025 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10026 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
10027 1.38629 1.38629 1.38629 1.38629
10028 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10029 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
10030 1.38629 1.38629 1.38629 1.38629
10031 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10032 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
10033 1.38629 1.38629 1.38629 1.38629
10034 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10035 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
10036 1.38629 1.38629 1.38629 1.38629
10037 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10038 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
10039 1.38629 1.38629 1.38629 1.38629
10040 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10041 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
10042 1.38629 1.38629 1.38629 1.38629
10043 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10044 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
10045 1.38629 1.38629 1.38629 1.38629
10046 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10047 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
10048 1.38629 1.38629 1.38629 1.38629
10049 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10050 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
10051 1.38629 1.38629 1.38629 1.38629
10052 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10053 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
10054 1.38629 1.38629 1.38629 1.38629
10055 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10056 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
10057 1.38629 1.38629 1.38629 1.38629
10058 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10059 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
10060 1.38629 1.38629 1.38629 1.38629
10061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10062 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
10063 1.38629 1.38629 1.38629 1.38629
10064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10065 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
10066 1.38629 1.38629 1.38629 1.38629
10067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10068 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
10069 1.38629 1.38629 1.38629 1.38629
10070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10071 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
10072 1.38629 1.38629 1.38629 1.38629
10073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10074 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
10075 1.38629 1.38629 1.38629 1.38629
10076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10077 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
10078 1.38629 1.38629 1.38629 1.38629
10079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10080 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
10081 1.38629 1.38629 1.38629 1.38629
10082 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10083 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
10084 1.38629 1.38629 1.38629 1.38629
10085 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10086 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
10087 1.38629 1.38629 1.38629 1.38629
10088 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10089 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
10090 1.38629 1.38629 1.38629 1.38629
10091 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10092 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
10093 1.38629 1.38629 1.38629 1.38629
10094 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10095 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
10096 1.38629 1.38629 1.38629 1.38629
10097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10098 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
10099 1.38629 1.38629 1.38629 1.38629
10100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10101 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
10102 1.38629 1.38629 1.38629 1.38629
10103 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
10104 //
10105 HMMER3/f [3.2.1 | June 2018]
10106 NAME long.42.aln
10107 LENG 70
10108 MAXL 160
10109 ALPH DNA
10110 RF no
10111 MM no
10112 CONS yes
10113 CS no
10114 MAP yes
10115 DATE Tue May 28 13:12:03 2019
10116 NSEQ 2
10117 EFFN 2.000000
10118 CKSUM 1523439480
10119 STATS LOCAL MSV -7.9792 0.72102
10120 STATS LOCAL VITERBI -9.3053 0.72102
10121 STATS LOCAL FORWARD -3.4853 0.72102
10122 HMM A C G T
10123 m->m m->i m->d i->m i->i d->m d->d
10124 COMPO 1.25034 1.49541 1.52580 1.30200
10125 1.38629 1.38629 1.38629 1.38629
10126 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
10127 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
10128 1.38629 1.38629 1.38629 1.38629
10129 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10130 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
10131 1.38629 1.38629 1.38629 1.38629
10132 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10133 3 2.38910 2.82844 0.25233 2.62837 3 g - - -
10134 1.38629 1.38629 1.38629 1.38629
10135 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10136 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
10137 1.38629 1.38629 1.38629 1.38629
10138 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10139 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
10140 1.38629 1.38629 1.38629 1.38629
10141 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10142 6 2.46232 0.33808 2.58153 2.07174 6 c - - -
10143 1.38629 1.38629 1.38629 1.38629
10144 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10145 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
10146 1.38629 1.38629 1.38629 1.38629
10147 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10148 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
10149 1.38629 1.38629 1.38629 1.38629
10150 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10151 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
10152 1.38629 1.38629 1.38629 1.38629
10153 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10154 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
10155 1.38629 1.38629 1.38629 1.38629
10156 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10157 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
10158 1.38629 1.38629 1.38629 1.38629
10159 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10160 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
10161 1.38629 1.38629 1.38629 1.38629
10162 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10163 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
10164 1.38629 1.38629 1.38629 1.38629
10165 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10166 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
10167 1.38629 1.38629 1.38629 1.38629
10168 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10169 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
10170 1.38629 1.38629 1.38629 1.38629
10171 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10172 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
10173 1.38629 1.38629 1.38629 1.38629
10174 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10175 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
10176 1.38629 1.38629 1.38629 1.38629
10177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10178 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
10179 1.38629 1.38629 1.38629 1.38629
10180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10181 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
10182 1.38629 1.38629 1.38629 1.38629
10183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10184 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
10185 1.38629 1.38629 1.38629 1.38629
10186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10187 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
10188 1.38629 1.38629 1.38629 1.38629
10189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10190 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
10191 1.38629 1.38629 1.38629 1.38629
10192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10193 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
10194 1.38629 1.38629 1.38629 1.38629
10195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10196 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
10197 1.38629 1.38629 1.38629 1.38629
10198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10199 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
10200 1.38629 1.38629 1.38629 1.38629
10201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10202 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
10203 1.38629 1.38629 1.38629 1.38629
10204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10205 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
10206 1.38629 1.38629 1.38629 1.38629
10207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10208 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
10209 1.38629 1.38629 1.38629 1.38629
10210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10211 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
10212 1.38629 1.38629 1.38629 1.38629
10213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10214 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
10215 1.38629 1.38629 1.38629 1.38629
10216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10217 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
10218 1.38629 1.38629 1.38629 1.38629
10219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10220 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
10221 1.38629 1.38629 1.38629 1.38629
10222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10223 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
10224 1.38629 1.38629 1.38629 1.38629
10225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10226 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
10227 1.38629 1.38629 1.38629 1.38629
10228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10229 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
10230 1.38629 1.38629 1.38629 1.38629
10231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10232 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
10233 1.38629 1.38629 1.38629 1.38629
10234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10235 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
10236 1.38629 1.38629 1.38629 1.38629
10237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10238 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
10239 1.38629 1.38629 1.38629 1.38629
10240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10241 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
10242 1.38629 1.38629 1.38629 1.38629
10243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10244 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
10245 1.38629 1.38629 1.38629 1.38629
10246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10247 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
10248 1.38629 1.38629 1.38629 1.38629
10249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10250 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
10251 1.38629 1.38629 1.38629 1.38629
10252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10253 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
10254 1.38629 1.38629 1.38629 1.38629
10255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10256 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
10257 1.38629 1.38629 1.38629 1.38629
10258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10259 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
10260 1.38629 1.38629 1.38629 1.38629
10261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10262 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
10263 1.38629 1.38629 1.38629 1.38629
10264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10265 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
10266 1.38629 1.38629 1.38629 1.38629
10267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10268 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
10269 1.38629 1.38629 1.38629 1.38629
10270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10271 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
10272 1.38629 1.38629 1.38629 1.38629
10273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10274 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
10275 1.38629 1.38629 1.38629 1.38629
10276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10277 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
10278 1.38629 1.38629 1.38629 1.38629
10279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10280 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
10281 1.38629 1.38629 1.38629 1.38629
10282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10283 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
10284 1.38629 1.38629 1.38629 1.38629
10285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10286 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
10287 1.38629 1.38629 1.38629 1.38629
10288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10289 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
10290 1.38629 1.38629 1.38629 1.38629
10291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10292 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
10293 1.38629 1.38629 1.38629 1.38629
10294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10295 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
10296 1.38629 1.38629 1.38629 1.38629
10297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10298 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
10299 1.38629 1.38629 1.38629 1.38629
10300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10301 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
10302 1.38629 1.38629 1.38629 1.38629
10303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10304 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
10305 1.38629 1.38629 1.38629 1.38629
10306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10307 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
10308 1.38629 1.38629 1.38629 1.38629
10309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10310 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
10311 1.38629 1.38629 1.38629 1.38629
10312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10313 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
10314 1.38629 1.38629 1.38629 1.38629
10315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10316 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
10317 1.38629 1.38629 1.38629 1.38629
10318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10319 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
10320 1.38629 1.38629 1.38629 1.38629
10321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10322 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
10323 1.38629 1.38629 1.38629 1.38629
10324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10325 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
10326 1.38629 1.38629 1.38629 1.38629
10327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10328 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
10329 1.38629 1.38629 1.38629 1.38629
10330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10331 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
10332 1.38629 1.38629 1.38629 1.38629
10333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10334 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
10335 1.38629 1.38629 1.38629 1.38629
10336 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
10337 //
10338 HMMER3/f [3.2.1 | June 2018]
10339 NAME long.43.aln
10340 LENG 70
10341 MAXL 160
10342 ALPH DNA
10343 RF no
10344 MM no
10345 CONS yes
10346 CS no
10347 MAP yes
10348 DATE Tue May 28 13:12:02 2019
10349 NSEQ 2
10350 EFFN 2.000000
10351 CKSUM 3312512886
10352 STATS LOCAL MSV -7.8819 0.72002
10353 STATS LOCAL VITERBI -9.2757 0.72002
10354 STATS LOCAL FORWARD -3.4162 0.72002
10355 HMM A C G T
10356 m->m m->i m->d i->m i->i d->m d->d
10357 COMPO 1.16793 1.59743 1.30588 1.53415
10358 1.38629 1.38629 1.38629 1.38629
10359 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
10360 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
10361 1.38629 1.38629 1.38629 1.38629
10362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10363 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
10364 1.38629 1.38629 1.38629 1.38629
10365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10366 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
10367 1.38629 1.38629 1.38629 1.38629
10368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10369 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
10370 1.38629 1.38629 1.38629 1.38629
10371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10372 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
10373 1.38629 1.38629 1.38629 1.38629
10374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10375 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
10376 1.38629 1.38629 1.38629 1.38629
10377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10378 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
10379 1.38629 1.38629 1.38629 1.38629
10380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10381 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
10382 1.38629 1.38629 1.38629 1.38629
10383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10384 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
10385 1.38629 1.38629 1.38629 1.38629
10386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10387 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
10388 1.38629 1.38629 1.38629 1.38629
10389 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10390 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
10391 1.38629 1.38629 1.38629 1.38629
10392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10393 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
10394 1.38629 1.38629 1.38629 1.38629
10395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10396 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
10397 1.38629 1.38629 1.38629 1.38629
10398 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10399 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
10400 1.38629 1.38629 1.38629 1.38629
10401 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10402 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
10403 1.38629 1.38629 1.38629 1.38629
10404 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10405 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
10406 1.38629 1.38629 1.38629 1.38629
10407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10408 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
10409 1.38629 1.38629 1.38629 1.38629
10410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10411 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
10412 1.38629 1.38629 1.38629 1.38629
10413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10414 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
10415 1.38629 1.38629 1.38629 1.38629
10416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10417 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
10418 1.38629 1.38629 1.38629 1.38629
10419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10420 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
10421 1.38629 1.38629 1.38629 1.38629
10422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10423 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
10424 1.38629 1.38629 1.38629 1.38629
10425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10426 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
10427 1.38629 1.38629 1.38629 1.38629
10428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10429 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
10430 1.38629 1.38629 1.38629 1.38629
10431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10432 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
10433 1.38629 1.38629 1.38629 1.38629
10434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10435 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
10436 1.38629 1.38629 1.38629 1.38629
10437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10438 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
10439 1.38629 1.38629 1.38629 1.38629
10440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10441 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
10442 1.38629 1.38629 1.38629 1.38629
10443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10444 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
10445 1.38629 1.38629 1.38629 1.38629
10446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10447 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
10448 1.38629 1.38629 1.38629 1.38629
10449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10450 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
10451 1.38629 1.38629 1.38629 1.38629
10452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10453 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
10454 1.38629 1.38629 1.38629 1.38629
10455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10456 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
10457 1.38629 1.38629 1.38629 1.38629
10458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10459 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
10460 1.38629 1.38629 1.38629 1.38629
10461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10462 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
10463 1.38629 1.38629 1.38629 1.38629
10464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10465 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
10466 1.38629 1.38629 1.38629 1.38629
10467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10468 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
10469 1.38629 1.38629 1.38629 1.38629
10470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10471 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
10472 1.38629 1.38629 1.38629 1.38629
10473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10474 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
10475 1.38629 1.38629 1.38629 1.38629
10476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10477 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
10478 1.38629 1.38629 1.38629 1.38629
10479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10480 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
10481 1.38629 1.38629 1.38629 1.38629
10482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10483 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
10484 1.38629 1.38629 1.38629 1.38629
10485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10486 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
10487 1.38629 1.38629 1.38629 1.38629
10488 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10489 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
10490 1.38629 1.38629 1.38629 1.38629
10491 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10492 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
10493 1.38629 1.38629 1.38629 1.38629
10494 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10495 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
10496 1.38629 1.38629 1.38629 1.38629
10497 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10498 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
10499 1.38629 1.38629 1.38629 1.38629
10500 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10501 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
10502 1.38629 1.38629 1.38629 1.38629
10503 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10504 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
10505 1.38629 1.38629 1.38629 1.38629
10506 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10507 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
10508 1.38629 1.38629 1.38629 1.38629
10509 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10510 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
10511 1.38629 1.38629 1.38629 1.38629
10512 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10513 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
10514 1.38629 1.38629 1.38629 1.38629
10515 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10516 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
10517 1.38629 1.38629 1.38629 1.38629
10518 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10519 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
10520 1.38629 1.38629 1.38629 1.38629
10521 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10522 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
10523 1.38629 1.38629 1.38629 1.38629
10524 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10525 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
10526 1.38629 1.38629 1.38629 1.38629
10527 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10528 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
10529 1.38629 1.38629 1.38629 1.38629
10530 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10531 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
10532 1.38629 1.38629 1.38629 1.38629
10533 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10534 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
10535 1.38629 1.38629 1.38629 1.38629
10536 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10537 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
10538 1.38629 1.38629 1.38629 1.38629
10539 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10540 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
10541 1.38629 1.38629 1.38629 1.38629
10542 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10543 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
10544 1.38629 1.38629 1.38629 1.38629
10545 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10546 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
10547 1.38629 1.38629 1.38629 1.38629
10548 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10549 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
10550 1.38629 1.38629 1.38629 1.38629
10551 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10552 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
10553 1.38629 1.38629 1.38629 1.38629
10554 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10555 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
10556 1.38629 1.38629 1.38629 1.38629
10557 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10558 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
10559 1.38629 1.38629 1.38629 1.38629
10560 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10561 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
10562 1.38629 1.38629 1.38629 1.38629
10563 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10564 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
10565 1.38629 1.38629 1.38629 1.38629
10566 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10567 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
10568 1.38629 1.38629 1.38629 1.38629
10569 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
10570 //
10571 HMMER3/f [3.2.1 | June 2018]
10572 NAME long.44.aln
10573 LENG 70
10574 MAXL 160
10575 ALPH DNA
10576 RF no
10577 MM no
10578 CONS yes
10579 CS no
10580 MAP yes
10581 DATE Tue May 28 13:12:02 2019
10582 NSEQ 2
10583 EFFN 2.000000
10584 CKSUM 2374664696
10585 STATS LOCAL MSV -8.0688 0.72046
10586 STATS LOCAL VITERBI -9.1038 0.72046
10587 STATS LOCAL FORWARD -3.5428 0.72046
10588 HMM A C G T
10589 m->m m->i m->d i->m i->i d->m d->d
10590 COMPO 1.13770 1.75158 1.40669 1.34326
10591 1.38629 1.38629 1.38629 1.38629
10592 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
10593 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
10594 1.38629 1.38629 1.38629 1.38629
10595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10596 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
10597 1.38629 1.38629 1.38629 1.38629
10598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10599 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
10600 1.38629 1.38629 1.38629 1.38629
10601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10602 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
10603 1.38629 1.38629 1.38629 1.38629
10604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10605 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
10606 1.38629 1.38629 1.38629 1.38629
10607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10608 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
10609 1.38629 1.38629 1.38629 1.38629
10610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10611 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
10612 1.38629 1.38629 1.38629 1.38629
10613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10614 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
10615 1.38629 1.38629 1.38629 1.38629
10616 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10617 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
10618 1.38629 1.38629 1.38629 1.38629
10619 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10620 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
10621 1.38629 1.38629 1.38629 1.38629
10622 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10623 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
10624 1.38629 1.38629 1.38629 1.38629
10625 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10626 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
10627 1.38629 1.38629 1.38629 1.38629
10628 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10629 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
10630 1.38629 1.38629 1.38629 1.38629
10631 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10632 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
10633 1.38629 1.38629 1.38629 1.38629
10634 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10635 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
10636 1.38629 1.38629 1.38629 1.38629
10637 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10638 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
10639 1.38629 1.38629 1.38629 1.38629
10640 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10641 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
10642 1.38629 1.38629 1.38629 1.38629
10643 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10644 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
10645 1.38629 1.38629 1.38629 1.38629
10646 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10647 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
10648 1.38629 1.38629 1.38629 1.38629
10649 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10650 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
10651 1.38629 1.38629 1.38629 1.38629
10652 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10653 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
10654 1.38629 1.38629 1.38629 1.38629
10655 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10656 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
10657 1.38629 1.38629 1.38629 1.38629
10658 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10659 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
10660 1.38629 1.38629 1.38629 1.38629
10661 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10662 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
10663 1.38629 1.38629 1.38629 1.38629
10664 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10665 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
10666 1.38629 1.38629 1.38629 1.38629
10667 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10668 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
10669 1.38629 1.38629 1.38629 1.38629
10670 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10671 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
10672 1.38629 1.38629 1.38629 1.38629
10673 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10674 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
10675 1.38629 1.38629 1.38629 1.38629
10676 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10677 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
10678 1.38629 1.38629 1.38629 1.38629
10679 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10680 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
10681 1.38629 1.38629 1.38629 1.38629
10682 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10683 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
10684 1.38629 1.38629 1.38629 1.38629
10685 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10686 32 2.38910 2.82844 0.25233 2.62837 32 g - - -
10687 1.38629 1.38629 1.38629 1.38629
10688 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10689 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
10690 1.38629 1.38629 1.38629 1.38629
10691 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10692 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
10693 1.38629 1.38629 1.38629 1.38629
10694 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10695 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
10696 1.38629 1.38629 1.38629 1.38629
10697 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10698 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
10699 1.38629 1.38629 1.38629 1.38629
10700 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10701 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
10702 1.38629 1.38629 1.38629 1.38629
10703 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10704 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
10705 1.38629 1.38629 1.38629 1.38629
10706 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10707 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
10708 1.38629 1.38629 1.38629 1.38629
10709 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10710 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
10711 1.38629 1.38629 1.38629 1.38629
10712 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10713 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
10714 1.38629 1.38629 1.38629 1.38629
10715 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10716 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
10717 1.38629 1.38629 1.38629 1.38629
10718 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10719 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
10720 1.38629 1.38629 1.38629 1.38629
10721 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10722 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
10723 1.38629 1.38629 1.38629 1.38629
10724 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10725 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
10726 1.38629 1.38629 1.38629 1.38629
10727 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10728 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
10729 1.38629 1.38629 1.38629 1.38629
10730 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10731 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
10732 1.38629 1.38629 1.38629 1.38629
10733 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10734 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
10735 1.38629 1.38629 1.38629 1.38629
10736 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10737 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
10738 1.38629 1.38629 1.38629 1.38629
10739 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10740 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
10741 1.38629 1.38629 1.38629 1.38629
10742 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10743 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
10744 1.38629 1.38629 1.38629 1.38629
10745 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10746 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
10747 1.38629 1.38629 1.38629 1.38629
10748 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10749 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
10750 1.38629 1.38629 1.38629 1.38629
10751 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10752 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
10753 1.38629 1.38629 1.38629 1.38629
10754 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10755 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
10756 1.38629 1.38629 1.38629 1.38629
10757 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10758 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
10759 1.38629 1.38629 1.38629 1.38629
10760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10761 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
10762 1.38629 1.38629 1.38629 1.38629
10763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10764 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
10765 1.38629 1.38629 1.38629 1.38629
10766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10767 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
10768 1.38629 1.38629 1.38629 1.38629
10769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10770 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
10771 1.38629 1.38629 1.38629 1.38629
10772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10773 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
10774 1.38629 1.38629 1.38629 1.38629
10775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10776 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
10777 1.38629 1.38629 1.38629 1.38629
10778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10779 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
10780 1.38629 1.38629 1.38629 1.38629
10781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10782 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
10783 1.38629 1.38629 1.38629 1.38629
10784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10785 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
10786 1.38629 1.38629 1.38629 1.38629
10787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10788 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
10789 1.38629 1.38629 1.38629 1.38629
10790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10791 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
10792 1.38629 1.38629 1.38629 1.38629
10793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10794 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
10795 1.38629 1.38629 1.38629 1.38629
10796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10797 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
10798 1.38629 1.38629 1.38629 1.38629
10799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10800 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
10801 1.38629 1.38629 1.38629 1.38629
10802 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
10803 //
10804 HMMER3/f [3.2.1 | June 2018]
10805 NAME long.45.aln
10806 LENG 70
10807 MAXL 160
10808 ALPH DNA
10809 RF no
10810 MM no
10811 CONS yes
10812 CS no
10813 MAP yes
10814 DATE Tue May 28 13:12:03 2019
10815 NSEQ 2
10816 EFFN 2.000000
10817 CKSUM 4135045782
10818 STATS LOCAL MSV -8.0188 0.72034
10819 STATS LOCAL VITERBI -9.0748 0.72034
10820 STATS LOCAL FORWARD -3.4332 0.72034
10821 HMM A C G T
10822 m->m m->i m->d i->m i->i d->m d->d
10823 COMPO 1.11475 1.55081 1.44662 1.49361
10824 1.38629 1.38629 1.38629 1.38629
10825 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
10826 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
10827 1.38629 1.38629 1.38629 1.38629
10828 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10829 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
10830 1.38629 1.38629 1.38629 1.38629
10831 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10832 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
10833 1.38629 1.38629 1.38629 1.38629
10834 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10835 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
10836 1.38629 1.38629 1.38629 1.38629
10837 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10838 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
10839 1.38629 1.38629 1.38629 1.38629
10840 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10841 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
10842 1.38629 1.38629 1.38629 1.38629
10843 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10844 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
10845 1.38629 1.38629 1.38629 1.38629
10846 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10847 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
10848 1.38629 1.38629 1.38629 1.38629
10849 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10850 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
10851 1.38629 1.38629 1.38629 1.38629
10852 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10853 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
10854 1.38629 1.38629 1.38629 1.38629
10855 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10856 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
10857 1.38629 1.38629 1.38629 1.38629
10858 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10859 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
10860 1.38629 1.38629 1.38629 1.38629
10861 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10862 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
10863 1.38629 1.38629 1.38629 1.38629
10864 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10865 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
10866 1.38629 1.38629 1.38629 1.38629
10867 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10868 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
10869 1.38629 1.38629 1.38629 1.38629
10870 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10871 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
10872 1.38629 1.38629 1.38629 1.38629
10873 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10874 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
10875 1.38629 1.38629 1.38629 1.38629
10876 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10877 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
10878 1.38629 1.38629 1.38629 1.38629
10879 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10880 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
10881 1.38629 1.38629 1.38629 1.38629
10882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10883 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
10884 1.38629 1.38629 1.38629 1.38629
10885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10886 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
10887 1.38629 1.38629 1.38629 1.38629
10888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10889 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
10890 1.38629 1.38629 1.38629 1.38629
10891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10892 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
10893 1.38629 1.38629 1.38629 1.38629
10894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10895 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
10896 1.38629 1.38629 1.38629 1.38629
10897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10898 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
10899 1.38629 1.38629 1.38629 1.38629
10900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10901 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
10902 1.38629 1.38629 1.38629 1.38629
10903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10904 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
10905 1.38629 1.38629 1.38629 1.38629
10906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10907 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
10908 1.38629 1.38629 1.38629 1.38629
10909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10910 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
10911 1.38629 1.38629 1.38629 1.38629
10912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10913 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
10914 1.38629 1.38629 1.38629 1.38629
10915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10916 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
10917 1.38629 1.38629 1.38629 1.38629
10918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10919 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
10920 1.38629 1.38629 1.38629 1.38629
10921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10922 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
10923 1.38629 1.38629 1.38629 1.38629
10924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10925 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
10926 1.38629 1.38629 1.38629 1.38629
10927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10928 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
10929 1.38629 1.38629 1.38629 1.38629
10930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10931 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
10932 1.38629 1.38629 1.38629 1.38629
10933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10934 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
10935 1.38629 1.38629 1.38629 1.38629
10936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10937 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
10938 1.38629 1.38629 1.38629 1.38629
10939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10940 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
10941 1.38629 1.38629 1.38629 1.38629
10942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10943 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
10944 1.38629 1.38629 1.38629 1.38629
10945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10946 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
10947 1.38629 1.38629 1.38629 1.38629
10948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10949 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
10950 1.38629 1.38629 1.38629 1.38629
10951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10952 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
10953 1.38629 1.38629 1.38629 1.38629
10954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10955 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
10956 1.38629 1.38629 1.38629 1.38629
10957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10958 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
10959 1.38629 1.38629 1.38629 1.38629
10960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10961 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
10962 1.38629 1.38629 1.38629 1.38629
10963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10964 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
10965 1.38629 1.38629 1.38629 1.38629
10966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10967 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
10968 1.38629 1.38629 1.38629 1.38629
10969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10970 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
10971 1.38629 1.38629 1.38629 1.38629
10972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10973 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
10974 1.38629 1.38629 1.38629 1.38629
10975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10976 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
10977 1.38629 1.38629 1.38629 1.38629
10978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10979 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
10980 1.38629 1.38629 1.38629 1.38629
10981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10982 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
10983 1.38629 1.38629 1.38629 1.38629
10984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10985 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
10986 1.38629 1.38629 1.38629 1.38629
10987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10988 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
10989 1.38629 1.38629 1.38629 1.38629
10990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10991 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
10992 1.38629 1.38629 1.38629 1.38629
10993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10994 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
10995 1.38629 1.38629 1.38629 1.38629
10996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10997 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
10998 1.38629 1.38629 1.38629 1.38629
10999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11000 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
11001 1.38629 1.38629 1.38629 1.38629
11002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11003 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
11004 1.38629 1.38629 1.38629 1.38629
11005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11006 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
11007 1.38629 1.38629 1.38629 1.38629
11008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11009 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
11010 1.38629 1.38629 1.38629 1.38629
11011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11012 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
11013 1.38629 1.38629 1.38629 1.38629
11014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11015 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
11016 1.38629 1.38629 1.38629 1.38629
11017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11018 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
11019 1.38629 1.38629 1.38629 1.38629
11020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11021 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
11022 1.38629 1.38629 1.38629 1.38629
11023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11024 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
11025 1.38629 1.38629 1.38629 1.38629
11026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11027 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
11028 1.38629 1.38629 1.38629 1.38629
11029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11030 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
11031 1.38629 1.38629 1.38629 1.38629
11032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11033 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
11034 1.38629 1.38629 1.38629 1.38629
11035 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
11036 //
11037 HMMER3/f [3.2.1 | June 2018]
11038 NAME long.46.aln
11039 LENG 70
11040 MAXL 160
11041 ALPH DNA
11042 RF no
11043 MM no
11044 CONS yes
11045 CS no
11046 MAP yes
11047 DATE Tue May 28 13:12:04 2019
11048 NSEQ 2
11049 EFFN 2.000000
11050 CKSUM 4194640144
11051 STATS LOCAL MSV -8.2586 0.72083
11052 STATS LOCAL VITERBI -9.2349 0.72083
11053 STATS LOCAL FORWARD -3.5611 0.72083
11054 HMM A C G T
11055 m->m m->i m->d i->m i->i d->m d->d
11056 COMPO 1.52180 1.56997 1.27094 1.22737
11057 1.38629 1.38629 1.38629 1.38629
11058 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
11059 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
11060 1.38629 1.38629 1.38629 1.38629
11061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11062 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
11063 1.38629 1.38629 1.38629 1.38629
11064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11065 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
11066 1.38629 1.38629 1.38629 1.38629
11067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11068 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
11069 1.38629 1.38629 1.38629 1.38629
11070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11071 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
11072 1.38629 1.38629 1.38629 1.38629
11073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11074 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
11075 1.38629 1.38629 1.38629 1.38629
11076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11077 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
11078 1.38629 1.38629 1.38629 1.38629
11079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11080 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
11081 1.38629 1.38629 1.38629 1.38629
11082 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11083 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
11084 1.38629 1.38629 1.38629 1.38629
11085 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11086 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
11087 1.38629 1.38629 1.38629 1.38629
11088 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11089 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
11090 1.38629 1.38629 1.38629 1.38629
11091 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11092 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
11093 1.38629 1.38629 1.38629 1.38629
11094 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11095 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
11096 1.38629 1.38629 1.38629 1.38629
11097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11098 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
11099 1.38629 1.38629 1.38629 1.38629
11100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11101 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
11102 1.38629 1.38629 1.38629 1.38629
11103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11104 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
11105 1.38629 1.38629 1.38629 1.38629
11106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11107 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
11108 1.38629 1.38629 1.38629 1.38629
11109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11110 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
11111 1.38629 1.38629 1.38629 1.38629
11112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11113 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
11114 1.38629 1.38629 1.38629 1.38629
11115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11116 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
11117 1.38629 1.38629 1.38629 1.38629
11118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11119 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
11120 1.38629 1.38629 1.38629 1.38629
11121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11122 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
11123 1.38629 1.38629 1.38629 1.38629
11124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11125 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
11126 1.38629 1.38629 1.38629 1.38629
11127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11128 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
11129 1.38629 1.38629 1.38629 1.38629
11130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11131 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
11132 1.38629 1.38629 1.38629 1.38629
11133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11134 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
11135 1.38629 1.38629 1.38629 1.38629
11136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11137 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
11138 1.38629 1.38629 1.38629 1.38629
11139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11140 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
11141 1.38629 1.38629 1.38629 1.38629
11142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11143 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
11144 1.38629 1.38629 1.38629 1.38629
11145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11146 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
11147 1.38629 1.38629 1.38629 1.38629
11148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11149 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
11150 1.38629 1.38629 1.38629 1.38629
11151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11152 32 2.38910 2.82844 0.25233 2.62837 32 g - - -
11153 1.38629 1.38629 1.38629 1.38629
11154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11155 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
11156 1.38629 1.38629 1.38629 1.38629
11157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11158 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
11159 1.38629 1.38629 1.38629 1.38629
11160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11161 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
11162 1.38629 1.38629 1.38629 1.38629
11163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11164 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
11165 1.38629 1.38629 1.38629 1.38629
11166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11167 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
11168 1.38629 1.38629 1.38629 1.38629
11169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11170 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
11171 1.38629 1.38629 1.38629 1.38629
11172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11173 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
11174 1.38629 1.38629 1.38629 1.38629
11175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11176 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
11177 1.38629 1.38629 1.38629 1.38629
11178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11179 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
11180 1.38629 1.38629 1.38629 1.38629
11181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11182 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
11183 1.38629 1.38629 1.38629 1.38629
11184 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11185 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
11186 1.38629 1.38629 1.38629 1.38629
11187 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11188 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
11189 1.38629 1.38629 1.38629 1.38629
11190 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11191 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
11192 1.38629 1.38629 1.38629 1.38629
11193 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11194 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
11195 1.38629 1.38629 1.38629 1.38629
11196 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11197 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
11198 1.38629 1.38629 1.38629 1.38629
11199 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11200 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
11201 1.38629 1.38629 1.38629 1.38629
11202 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11203 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
11204 1.38629 1.38629 1.38629 1.38629
11205 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11206 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
11207 1.38629 1.38629 1.38629 1.38629
11208 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11209 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
11210 1.38629 1.38629 1.38629 1.38629
11211 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11212 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
11213 1.38629 1.38629 1.38629 1.38629
11214 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11215 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
11216 1.38629 1.38629 1.38629 1.38629
11217 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11218 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
11219 1.38629 1.38629 1.38629 1.38629
11220 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11221 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
11222 1.38629 1.38629 1.38629 1.38629
11223 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11224 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
11225 1.38629 1.38629 1.38629 1.38629
11226 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11227 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
11228 1.38629 1.38629 1.38629 1.38629
11229 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11230 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
11231 1.38629 1.38629 1.38629 1.38629
11232 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11233 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
11234 1.38629 1.38629 1.38629 1.38629
11235 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11236 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
11237 1.38629 1.38629 1.38629 1.38629
11238 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11239 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
11240 1.38629 1.38629 1.38629 1.38629
11241 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11242 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
11243 1.38629 1.38629 1.38629 1.38629
11244 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11245 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
11246 1.38629 1.38629 1.38629 1.38629
11247 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11248 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
11249 1.38629 1.38629 1.38629 1.38629
11250 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11251 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
11252 1.38629 1.38629 1.38629 1.38629
11253 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11254 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
11255 1.38629 1.38629 1.38629 1.38629
11256 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11257 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
11258 1.38629 1.38629 1.38629 1.38629
11259 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11260 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
11261 1.38629 1.38629 1.38629 1.38629
11262 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11263 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
11264 1.38629 1.38629 1.38629 1.38629
11265 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11266 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
11267 1.38629 1.38629 1.38629 1.38629
11268 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
11269 //
11270 HMMER3/f [3.2.1 | June 2018]
11271 NAME long.47.aln
11272 LENG 70
11273 MAXL 160
11274 ALPH DNA
11275 RF no
11276 MM no
11277 CONS yes
11278 CS no
11279 MAP yes
11280 DATE Tue May 28 13:12:04 2019
11281 NSEQ 2
11282 EFFN 2.000000
11283 CKSUM 2191598282
11284 STATS LOCAL MSV -7.8363 0.71973
11285 STATS LOCAL VITERBI -9.1518 0.71973
11286 STATS LOCAL FORWARD -3.7787 0.71973
11287 HMM A C G T
11288 m->m m->i m->d i->m i->i d->m d->d
11289 COMPO 1.28422 1.64197 1.15255 1.54316
11290 1.38629 1.38629 1.38629 1.38629
11291 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
11292 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
11293 1.38629 1.38629 1.38629 1.38629
11294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11295 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
11296 1.38629 1.38629 1.38629 1.38629
11297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11298 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
11299 1.38629 1.38629 1.38629 1.38629
11300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11301 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
11302 1.38629 1.38629 1.38629 1.38629
11303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11304 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
11305 1.38629 1.38629 1.38629 1.38629
11306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11307 6 2.46232 0.33808 2.58153 2.07174 6 c - - -
11308 1.38629 1.38629 1.38629 1.38629
11309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11310 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
11311 1.38629 1.38629 1.38629 1.38629
11312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11313 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
11314 1.38629 1.38629 1.38629 1.38629
11315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11316 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
11317 1.38629 1.38629 1.38629 1.38629
11318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11319 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
11320 1.38629 1.38629 1.38629 1.38629
11321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11322 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
11323 1.38629 1.38629 1.38629 1.38629
11324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11325 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
11326 1.38629 1.38629 1.38629 1.38629
11327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11328 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
11329 1.38629 1.38629 1.38629 1.38629
11330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11331 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
11332 1.38629 1.38629 1.38629 1.38629
11333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11334 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
11335 1.38629 1.38629 1.38629 1.38629
11336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11337 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
11338 1.38629 1.38629 1.38629 1.38629
11339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11340 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
11341 1.38629 1.38629 1.38629 1.38629
11342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11343 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
11344 1.38629 1.38629 1.38629 1.38629
11345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11346 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
11347 1.38629 1.38629 1.38629 1.38629
11348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11349 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
11350 1.38629 1.38629 1.38629 1.38629
11351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11352 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
11353 1.38629 1.38629 1.38629 1.38629
11354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11355 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
11356 1.38629 1.38629 1.38629 1.38629
11357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11358 23 2.38910 2.82844 0.25233 2.62837 23 g - - -
11359 1.38629 1.38629 1.38629 1.38629
11360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11361 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
11362 1.38629 1.38629 1.38629 1.38629
11363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11364 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
11365 1.38629 1.38629 1.38629 1.38629
11366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11367 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
11368 1.38629 1.38629 1.38629 1.38629
11369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11370 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
11371 1.38629 1.38629 1.38629 1.38629
11372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11373 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
11374 1.38629 1.38629 1.38629 1.38629
11375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11376 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
11377 1.38629 1.38629 1.38629 1.38629
11378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11379 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
11380 1.38629 1.38629 1.38629 1.38629
11381 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11382 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
11383 1.38629 1.38629 1.38629 1.38629
11384 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11385 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
11386 1.38629 1.38629 1.38629 1.38629
11387 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11388 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
11389 1.38629 1.38629 1.38629 1.38629
11390 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11391 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
11392 1.38629 1.38629 1.38629 1.38629
11393 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11394 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
11395 1.38629 1.38629 1.38629 1.38629
11396 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11397 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
11398 1.38629 1.38629 1.38629 1.38629
11399 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11400 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
11401 1.38629 1.38629 1.38629 1.38629
11402 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11403 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
11404 1.38629 1.38629 1.38629 1.38629
11405 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11406 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
11407 1.38629 1.38629 1.38629 1.38629
11408 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11409 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
11410 1.38629 1.38629 1.38629 1.38629
11411 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11412 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
11413 1.38629 1.38629 1.38629 1.38629
11414 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11415 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
11416 1.38629 1.38629 1.38629 1.38629
11417 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11418 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
11419 1.38629 1.38629 1.38629 1.38629
11420 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11421 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
11422 1.38629 1.38629 1.38629 1.38629
11423 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11424 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
11425 1.38629 1.38629 1.38629 1.38629
11426 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11427 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
11428 1.38629 1.38629 1.38629 1.38629
11429 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11430 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
11431 1.38629 1.38629 1.38629 1.38629
11432 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11433 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
11434 1.38629 1.38629 1.38629 1.38629
11435 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11436 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
11437 1.38629 1.38629 1.38629 1.38629
11438 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11439 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
11440 1.38629 1.38629 1.38629 1.38629
11441 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11442 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
11443 1.38629 1.38629 1.38629 1.38629
11444 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11445 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
11446 1.38629 1.38629 1.38629 1.38629
11447 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11448 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
11449 1.38629 1.38629 1.38629 1.38629
11450 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11451 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
11452 1.38629 1.38629 1.38629 1.38629
11453 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11454 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
11455 1.38629 1.38629 1.38629 1.38629
11456 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11457 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
11458 1.38629 1.38629 1.38629 1.38629
11459 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11460 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
11461 1.38629 1.38629 1.38629 1.38629
11462 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11463 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
11464 1.38629 1.38629 1.38629 1.38629
11465 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11466 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
11467 1.38629 1.38629 1.38629 1.38629
11468 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11469 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
11470 1.38629 1.38629 1.38629 1.38629
11471 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11472 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
11473 1.38629 1.38629 1.38629 1.38629
11474 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11475 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
11476 1.38629 1.38629 1.38629 1.38629
11477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11478 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
11479 1.38629 1.38629 1.38629 1.38629
11480 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11481 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
11482 1.38629 1.38629 1.38629 1.38629
11483 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11484 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
11485 1.38629 1.38629 1.38629 1.38629
11486 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11487 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
11488 1.38629 1.38629 1.38629 1.38629
11489 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11490 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
11491 1.38629 1.38629 1.38629 1.38629
11492 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11493 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
11494 1.38629 1.38629 1.38629 1.38629
11495 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11496 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
11497 1.38629 1.38629 1.38629 1.38629
11498 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11499 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
11500 1.38629 1.38629 1.38629 1.38629
11501 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
11502 //
11503 HMMER3/f [3.2.1 | June 2018]
11504 NAME long.48.aln
11505 LENG 70
11506 MAXL 160
11507 ALPH DNA
11508 RF no
11509 MM no
11510 CONS yes
11511 CS no
11512 MAP yes
11513 DATE Tue May 28 13:12:04 2019
11514 NSEQ 2
11515 EFFN 2.000000
11516 CKSUM 664434907
11517 STATS LOCAL MSV -7.9930 0.72119
11518 STATS LOCAL VITERBI -9.2272 0.72119
11519 STATS LOCAL FORWARD -3.6562 0.72119
11520 HMM A C G T
11521 m->m m->i m->d i->m i->i d->m d->d
11522 COMPO 1.41731 1.24184 1.53303 1.37475
11523 1.38629 1.38629 1.38629 1.38629
11524 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
11525 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
11526 1.38629 1.38629 1.38629 1.38629
11527 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11528 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
11529 1.38629 1.38629 1.38629 1.38629
11530 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11531 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
11532 1.38629 1.38629 1.38629 1.38629
11533 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11534 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
11535 1.38629 1.38629 1.38629 1.38629
11536 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11537 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
11538 1.38629 1.38629 1.38629 1.38629
11539 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11540 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
11541 1.38629 1.38629 1.38629 1.38629
11542 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11543 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
11544 1.38629 1.38629 1.38629 1.38629
11545 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11546 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
11547 1.38629 1.38629 1.38629 1.38629
11548 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11549 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
11550 1.38629 1.38629 1.38629 1.38629
11551 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11552 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
11553 1.38629 1.38629 1.38629 1.38629
11554 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11555 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
11556 1.38629 1.38629 1.38629 1.38629
11557 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11558 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
11559 1.38629 1.38629 1.38629 1.38629
11560 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11561 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
11562 1.38629 1.38629 1.38629 1.38629
11563 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11564 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
11565 1.38629 1.38629 1.38629 1.38629
11566 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11567 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
11568 1.38629 1.38629 1.38629 1.38629
11569 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11570 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
11571 1.38629 1.38629 1.38629 1.38629
11572 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11573 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
11574 1.38629 1.38629 1.38629 1.38629
11575 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11576 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
11577 1.38629 1.38629 1.38629 1.38629
11578 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11579 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
11580 1.38629 1.38629 1.38629 1.38629
11581 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11582 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
11583 1.38629 1.38629 1.38629 1.38629
11584 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11585 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
11586 1.38629 1.38629 1.38629 1.38629
11587 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11588 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
11589 1.38629 1.38629 1.38629 1.38629
11590 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11591 23 2.38910 2.82844 0.25233 2.62837 23 g - - -
11592 1.38629 1.38629 1.38629 1.38629
11593 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11594 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
11595 1.38629 1.38629 1.38629 1.38629
11596 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11597 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
11598 1.38629 1.38629 1.38629 1.38629
11599 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11600 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
11601 1.38629 1.38629 1.38629 1.38629
11602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11603 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
11604 1.38629 1.38629 1.38629 1.38629
11605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11606 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
11607 1.38629 1.38629 1.38629 1.38629
11608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11609 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
11610 1.38629 1.38629 1.38629 1.38629
11611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11612 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
11613 1.38629 1.38629 1.38629 1.38629
11614 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11615 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
11616 1.38629 1.38629 1.38629 1.38629
11617 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11618 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
11619 1.38629 1.38629 1.38629 1.38629
11620 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11621 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
11622 1.38629 1.38629 1.38629 1.38629
11623 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11624 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
11625 1.38629 1.38629 1.38629 1.38629
11626 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11627 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
11628 1.38629 1.38629 1.38629 1.38629
11629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11630 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
11631 1.38629 1.38629 1.38629 1.38629
11632 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11633 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
11634 1.38629 1.38629 1.38629 1.38629
11635 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11636 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
11637 1.38629 1.38629 1.38629 1.38629
11638 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11639 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
11640 1.38629 1.38629 1.38629 1.38629
11641 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11642 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
11643 1.38629 1.38629 1.38629 1.38629
11644 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11645 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
11646 1.38629 1.38629 1.38629 1.38629
11647 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11648 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
11649 1.38629 1.38629 1.38629 1.38629
11650 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11651 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
11652 1.38629 1.38629 1.38629 1.38629
11653 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11654 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
11655 1.38629 1.38629 1.38629 1.38629
11656 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11657 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
11658 1.38629 1.38629 1.38629 1.38629
11659 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11660 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
11661 1.38629 1.38629 1.38629 1.38629
11662 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11663 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
11664 1.38629 1.38629 1.38629 1.38629
11665 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11666 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
11667 1.38629 1.38629 1.38629 1.38629
11668 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11669 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
11670 1.38629 1.38629 1.38629 1.38629
11671 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11672 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
11673 1.38629 1.38629 1.38629 1.38629
11674 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11675 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
11676 1.38629 1.38629 1.38629 1.38629
11677 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11678 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
11679 1.38629 1.38629 1.38629 1.38629
11680 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11681 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
11682 1.38629 1.38629 1.38629 1.38629
11683 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11684 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
11685 1.38629 1.38629 1.38629 1.38629
11686 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11687 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
11688 1.38629 1.38629 1.38629 1.38629
11689 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11690 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
11691 1.38629 1.38629 1.38629 1.38629
11692 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11693 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
11694 1.38629 1.38629 1.38629 1.38629
11695 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11696 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
11697 1.38629 1.38629 1.38629 1.38629
11698 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11699 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
11700 1.38629 1.38629 1.38629 1.38629
11701 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11702 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
11703 1.38629 1.38629 1.38629 1.38629
11704 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11705 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
11706 1.38629 1.38629 1.38629 1.38629
11707 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11708 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
11709 1.38629 1.38629 1.38629 1.38629
11710 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11711 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
11712 1.38629 1.38629 1.38629 1.38629
11713 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11714 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
11715 1.38629 1.38629 1.38629 1.38629
11716 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11717 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
11718 1.38629 1.38629 1.38629 1.38629
11719 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11720 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
11721 1.38629 1.38629 1.38629 1.38629
11722 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11723 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
11724 1.38629 1.38629 1.38629 1.38629
11725 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11726 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
11727 1.38629 1.38629 1.38629 1.38629
11728 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11729 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
11730 1.38629 1.38629 1.38629 1.38629
11731 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11732 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
11733 1.38629 1.38629 1.38629 1.38629
11734 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
11735 //
11736 HMMER3/f [3.2.1 | June 2018]
11737 NAME long.49.aln
11738 LENG 70
11739 MAXL 160
11740 ALPH DNA
11741 RF no
11742 MM no
11743 CONS yes
11744 CS no
11745 MAP yes
11746 DATE Tue May 28 13:12:04 2019
11747 NSEQ 2
11748 EFFN 2.000000
11749 CKSUM 2518237207
11750 STATS LOCAL MSV -7.6534 0.71987
11751 STATS LOCAL VITERBI -9.2822 0.71987
11752 STATS LOCAL FORWARD -3.5503 0.71987
11753 HMM A C G T
11754 m->m m->i m->d i->m i->i d->m d->d
11755 COMPO 1.13983 1.68362 1.27304 1.53970
11756 1.38629 1.38629 1.38629 1.38629
11757 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
11758 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
11759 1.38629 1.38629 1.38629 1.38629
11760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11761 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
11762 1.38629 1.38629 1.38629 1.38629
11763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11764 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
11765 1.38629 1.38629 1.38629 1.38629
11766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11767 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
11768 1.38629 1.38629 1.38629 1.38629
11769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11770 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
11771 1.38629 1.38629 1.38629 1.38629
11772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11773 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
11774 1.38629 1.38629 1.38629 1.38629
11775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11776 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
11777 1.38629 1.38629 1.38629 1.38629
11778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11779 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
11780 1.38629 1.38629 1.38629 1.38629
11781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11782 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
11783 1.38629 1.38629 1.38629 1.38629
11784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11785 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
11786 1.38629 1.38629 1.38629 1.38629
11787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11788 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
11789 1.38629 1.38629 1.38629 1.38629
11790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11791 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
11792 1.38629 1.38629 1.38629 1.38629
11793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11794 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
11795 1.38629 1.38629 1.38629 1.38629
11796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11797 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
11798 1.38629 1.38629 1.38629 1.38629
11799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11800 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
11801 1.38629 1.38629 1.38629 1.38629
11802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11803 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
11804 1.38629 1.38629 1.38629 1.38629
11805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11806 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
11807 1.38629 1.38629 1.38629 1.38629
11808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11809 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
11810 1.38629 1.38629 1.38629 1.38629
11811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11812 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
11813 1.38629 1.38629 1.38629 1.38629
11814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11815 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
11816 1.38629 1.38629 1.38629 1.38629
11817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11818 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
11819 1.38629 1.38629 1.38629 1.38629
11820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11821 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
11822 1.38629 1.38629 1.38629 1.38629
11823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11824 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
11825 1.38629 1.38629 1.38629 1.38629
11826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11827 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
11828 1.38629 1.38629 1.38629 1.38629
11829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11830 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
11831 1.38629 1.38629 1.38629 1.38629
11832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11833 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
11834 1.38629 1.38629 1.38629 1.38629
11835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11836 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
11837 1.38629 1.38629 1.38629 1.38629
11838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11839 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
11840 1.38629 1.38629 1.38629 1.38629
11841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11842 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
11843 1.38629 1.38629 1.38629 1.38629
11844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11845 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
11846 1.38629 1.38629 1.38629 1.38629
11847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11848 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
11849 1.38629 1.38629 1.38629 1.38629
11850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11851 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
11852 1.38629 1.38629 1.38629 1.38629
11853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11854 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
11855 1.38629 1.38629 1.38629 1.38629
11856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11857 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
11858 1.38629 1.38629 1.38629 1.38629
11859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11860 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
11861 1.38629 1.38629 1.38629 1.38629
11862 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11863 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
11864 1.38629 1.38629 1.38629 1.38629
11865 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11866 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
11867 1.38629 1.38629 1.38629 1.38629
11868 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11869 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
11870 1.38629 1.38629 1.38629 1.38629
11871 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11872 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
11873 1.38629 1.38629 1.38629 1.38629
11874 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11875 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
11876 1.38629 1.38629 1.38629 1.38629
11877 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11878 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
11879 1.38629 1.38629 1.38629 1.38629
11880 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11881 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
11882 1.38629 1.38629 1.38629 1.38629
11883 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11884 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
11885 1.38629 1.38629 1.38629 1.38629
11886 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11887 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
11888 1.38629 1.38629 1.38629 1.38629
11889 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11890 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
11891 1.38629 1.38629 1.38629 1.38629
11892 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11893 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
11894 1.38629 1.38629 1.38629 1.38629
11895 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11896 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
11897 1.38629 1.38629 1.38629 1.38629
11898 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11899 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
11900 1.38629 1.38629 1.38629 1.38629
11901 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11902 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
11903 1.38629 1.38629 1.38629 1.38629
11904 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11905 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
11906 1.38629 1.38629 1.38629 1.38629
11907 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11908 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
11909 1.38629 1.38629 1.38629 1.38629
11910 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11911 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
11912 1.38629 1.38629 1.38629 1.38629
11913 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11914 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
11915 1.38629 1.38629 1.38629 1.38629
11916 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11917 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
11918 1.38629 1.38629 1.38629 1.38629
11919 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11920 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
11921 1.38629 1.38629 1.38629 1.38629
11922 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11923 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
11924 1.38629 1.38629 1.38629 1.38629
11925 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11926 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
11927 1.38629 1.38629 1.38629 1.38629
11928 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11929 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
11930 1.38629 1.38629 1.38629 1.38629
11931 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11932 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
11933 1.38629 1.38629 1.38629 1.38629
11934 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11935 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
11936 1.38629 1.38629 1.38629 1.38629
11937 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11938 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
11939 1.38629 1.38629 1.38629 1.38629
11940 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11941 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
11942 1.38629 1.38629 1.38629 1.38629
11943 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11944 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
11945 1.38629 1.38629 1.38629 1.38629
11946 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11947 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
11948 1.38629 1.38629 1.38629 1.38629
11949 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11950 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
11951 1.38629 1.38629 1.38629 1.38629
11952 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11953 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
11954 1.38629 1.38629 1.38629 1.38629
11955 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11956 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
11957 1.38629 1.38629 1.38629 1.38629
11958 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11959 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
11960 1.38629 1.38629 1.38629 1.38629
11961 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11962 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
11963 1.38629 1.38629 1.38629 1.38629
11964 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11965 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
11966 1.38629 1.38629 1.38629 1.38629
11967 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
11968 //
11969 HMMER3/f [3.2.1 | June 2018]
11970 NAME long.50.aln
11971 LENG 70
11972 MAXL 160
11973 ALPH DNA
11974 RF no
11975 MM no
11976 CONS yes
11977 CS no
11978 MAP yes
11979 DATE Tue May 28 13:12:04 2019
11980 NSEQ 2
11981 EFFN 2.000000
11982 CKSUM 3932738091
11983 STATS LOCAL MSV -8.6318 0.72054
11984 STATS LOCAL VITERBI -9.7767 0.72054
11985 STATS LOCAL FORWARD -3.3478 0.72054
11986 HMM A C G T
11987 m->m m->i m->d i->m i->i d->m d->d
11988 COMPO 1.06228 1.66134 1.52409 1.39987
11989 1.38629 1.38629 1.38629 1.38629
11990 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
11991 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
11992 1.38629 1.38629 1.38629 1.38629
11993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11994 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
11995 1.38629 1.38629 1.38629 1.38629
11996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11997 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
11998 1.38629 1.38629 1.38629 1.38629
11999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12000 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
12001 1.38629 1.38629 1.38629 1.38629
12002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12003 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
12004 1.38629 1.38629 1.38629 1.38629
12005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12006 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
12007 1.38629 1.38629 1.38629 1.38629
12008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12009 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
12010 1.38629 1.38629 1.38629 1.38629
12011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12012 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
12013 1.38629 1.38629 1.38629 1.38629
12014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12015 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
12016 1.38629 1.38629 1.38629 1.38629
12017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12018 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
12019 1.38629 1.38629 1.38629 1.38629
12020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12021 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
12022 1.38629 1.38629 1.38629 1.38629
12023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12024 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
12025 1.38629 1.38629 1.38629 1.38629
12026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12027 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
12028 1.38629 1.38629 1.38629 1.38629
12029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12030 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
12031 1.38629 1.38629 1.38629 1.38629
12032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12033 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
12034 1.38629 1.38629 1.38629 1.38629
12035 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12036 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
12037 1.38629 1.38629 1.38629 1.38629
12038 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12039 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
12040 1.38629 1.38629 1.38629 1.38629
12041 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12042 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
12043 1.38629 1.38629 1.38629 1.38629
12044 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12045 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
12046 1.38629 1.38629 1.38629 1.38629
12047 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12048 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
12049 1.38629 1.38629 1.38629 1.38629
12050 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12051 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
12052 1.38629 1.38629 1.38629 1.38629
12053 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12054 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
12055 1.38629 1.38629 1.38629 1.38629
12056 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12057 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
12058 1.38629 1.38629 1.38629 1.38629
12059 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12060 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
12061 1.38629 1.38629 1.38629 1.38629
12062 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12063 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
12064 1.38629 1.38629 1.38629 1.38629
12065 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12066 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
12067 1.38629 1.38629 1.38629 1.38629
12068 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12069 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
12070 1.38629 1.38629 1.38629 1.38629
12071 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12072 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
12073 1.38629 1.38629 1.38629 1.38629
12074 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12075 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
12076 1.38629 1.38629 1.38629 1.38629
12077 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12078 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
12079 1.38629 1.38629 1.38629 1.38629
12080 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12081 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
12082 1.38629 1.38629 1.38629 1.38629
12083 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12084 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
12085 1.38629 1.38629 1.38629 1.38629
12086 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12087 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
12088 1.38629 1.38629 1.38629 1.38629
12089 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12090 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
12091 1.38629 1.38629 1.38629 1.38629
12092 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12093 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
12094 1.38629 1.38629 1.38629 1.38629
12095 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12096 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
12097 1.38629 1.38629 1.38629 1.38629
12098 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12099 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
12100 1.38629 1.38629 1.38629 1.38629
12101 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12102 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
12103 1.38629 1.38629 1.38629 1.38629
12104 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12105 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
12106 1.38629 1.38629 1.38629 1.38629
12107 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12108 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
12109 1.38629 1.38629 1.38629 1.38629
12110 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12111 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
12112 1.38629 1.38629 1.38629 1.38629
12113 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12114 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
12115 1.38629 1.38629 1.38629 1.38629
12116 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12117 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
12118 1.38629 1.38629 1.38629 1.38629
12119 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12120 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
12121 1.38629 1.38629 1.38629 1.38629
12122 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12123 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
12124 1.38629 1.38629 1.38629 1.38629
12125 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12126 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
12127 1.38629 1.38629 1.38629 1.38629
12128 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12129 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
12130 1.38629 1.38629 1.38629 1.38629
12131 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12132 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
12133 1.38629 1.38629 1.38629 1.38629
12134 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12135 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
12136 1.38629 1.38629 1.38629 1.38629
12137 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12138 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
12139 1.38629 1.38629 1.38629 1.38629
12140 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12141 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
12142 1.38629 1.38629 1.38629 1.38629
12143 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12144 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
12145 1.38629 1.38629 1.38629 1.38629
12146 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12147 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
12148 1.38629 1.38629 1.38629 1.38629
12149 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12150 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
12151 1.38629 1.38629 1.38629 1.38629
12152 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12153 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
12154 1.38629 1.38629 1.38629 1.38629
12155 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12156 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
12157 1.38629 1.38629 1.38629 1.38629
12158 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12159 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
12160 1.38629 1.38629 1.38629 1.38629
12161 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12162 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
12163 1.38629 1.38629 1.38629 1.38629
12164 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12165 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
12166 1.38629 1.38629 1.38629 1.38629
12167 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12168 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
12169 1.38629 1.38629 1.38629 1.38629
12170 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12171 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
12172 1.38629 1.38629 1.38629 1.38629
12173 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12174 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
12175 1.38629 1.38629 1.38629 1.38629
12176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12177 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
12178 1.38629 1.38629 1.38629 1.38629
12179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12180 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
12181 1.38629 1.38629 1.38629 1.38629
12182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12183 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
12184 1.38629 1.38629 1.38629 1.38629
12185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12186 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
12187 1.38629 1.38629 1.38629 1.38629
12188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12189 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
12190 1.38629 1.38629 1.38629 1.38629
12191 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12192 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
12193 1.38629 1.38629 1.38629 1.38629
12194 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12195 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
12196 1.38629 1.38629 1.38629 1.38629
12197 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12198 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
12199 1.38629 1.38629 1.38629 1.38629
12200 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
12201 //
12202 HMMER3/f [3.2.1 | June 2018]
12203 NAME long.51.aln
12204 LENG 76
12205 MAXL 168
12206 ALPH DNA
12207 RF no
12208 MM no
12209 CONS yes
12210 CS no
12211 MAP yes
12212 DATE Tue May 28 13:12:04 2019
12213 NSEQ 2
12214 EFFN 2.000000
12215 CKSUM 3988988039
12216 STATS LOCAL MSV -8.1442 0.72049
12217 STATS LOCAL VITERBI -9.4670 0.72049
12218 STATS LOCAL FORWARD -3.5137 0.72049
12219 HMM A C G T
12220 m->m m->i m->d i->m i->i d->m d->d
12221 COMPO 1.10127 1.65526 1.33843 1.54060
12222 1.38629 1.38629 1.38629 1.38629
12223 0.33647 3.73767 1.33977 1.46634 0.26236 0.00000 *
12224 1 1.98342 0.60779 2.04641 1.66785 1 c - - -
12225 1.38629 1.38629 1.38629 1.38629
12226 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
12227 2 0.56139 2.08489 1.86185 1.89791 2 a - - -
12228 1.38629 1.38629 1.38629 1.38629
12229 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
12230 3 1.98342 0.60779 2.04641 1.66785 3 c - - -
12231 1.38629 1.38629 1.38629 1.38629
12232 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
12233 4 1.91091 1.78233 1.95844 0.61114 4 t - - -
12234 1.38629 1.38629 1.38629 1.38629
12235 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
12236 5 1.91091 1.78233 1.95844 0.61114 5 t - - -
12237 1.38629 1.38629 1.38629 1.38629
12238 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
12239 6 0.56139 2.08489 1.86185 1.89791 6 a - - -
12240 1.38629 1.38629 1.38629 1.38629
12241 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
12242 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
12243 1.38629 1.38629 1.38629 1.38629
12244 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12245 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
12246 1.38629 1.38629 1.38629 1.38629
12247 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12248 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
12249 1.38629 1.38629 1.38629 1.38629
12250 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12251 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
12252 1.38629 1.38629 1.38629 1.38629
12253 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12254 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
12255 1.38629 1.38629 1.38629 1.38629
12256 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12257 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
12258 1.38629 1.38629 1.38629 1.38629
12259 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12260 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
12261 1.38629 1.38629 1.38629 1.38629
12262 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12263 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
12264 1.38629 1.38629 1.38629 1.38629
12265 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12266 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
12267 1.38629 1.38629 1.38629 1.38629
12268 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12269 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
12270 1.38629 1.38629 1.38629 1.38629
12271 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12272 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
12273 1.38629 1.38629 1.38629 1.38629
12274 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12275 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
12276 1.38629 1.38629 1.38629 1.38629
12277 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12278 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
12279 1.38629 1.38629 1.38629 1.38629
12280 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12281 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
12282 1.38629 1.38629 1.38629 1.38629
12283 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12284 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
12285 1.38629 1.38629 1.38629 1.38629
12286 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12287 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
12288 1.38629 1.38629 1.38629 1.38629
12289 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12290 23 2.38910 2.82844 0.25233 2.62837 23 g - - -
12291 1.38629 1.38629 1.38629 1.38629
12292 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12293 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
12294 1.38629 1.38629 1.38629 1.38629
12295 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12296 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
12297 1.38629 1.38629 1.38629 1.38629
12298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12299 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
12300 1.38629 1.38629 1.38629 1.38629
12301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12302 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
12303 1.38629 1.38629 1.38629 1.38629
12304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12305 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
12306 1.38629 1.38629 1.38629 1.38629
12307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12308 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
12309 1.38629 1.38629 1.38629 1.38629
12310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12311 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
12312 1.38629 1.38629 1.38629 1.38629
12313 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12314 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
12315 1.38629 1.38629 1.38629 1.38629
12316 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12317 32 2.38910 2.82844 0.25233 2.62837 32 g - - -
12318 1.38629 1.38629 1.38629 1.38629
12319 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12320 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
12321 1.38629 1.38629 1.38629 1.38629
12322 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12323 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
12324 1.38629 1.38629 1.38629 1.38629
12325 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12326 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
12327 1.38629 1.38629 1.38629 1.38629
12328 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12329 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
12330 1.38629 1.38629 1.38629 1.38629
12331 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12332 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
12333 1.38629 1.38629 1.38629 1.38629
12334 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12335 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
12336 1.38629 1.38629 1.38629 1.38629
12337 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12338 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
12339 1.38629 1.38629 1.38629 1.38629
12340 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12341 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
12342 1.38629 1.38629 1.38629 1.38629
12343 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12344 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
12345 1.38629 1.38629 1.38629 1.38629
12346 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12347 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
12348 1.38629 1.38629 1.38629 1.38629
12349 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12350 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
12351 1.38629 1.38629 1.38629 1.38629
12352 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12353 44 1.88401 1.14290 1.03416 1.75097 44 g - - -
12354 1.38629 1.38629 1.38629 1.38629
12355 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12356 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
12357 1.38629 1.38629 1.38629 1.38629
12358 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12359 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
12360 1.38629 1.38629 1.38629 1.38629
12361 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12362 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
12363 1.38629 1.38629 1.38629 1.38629
12364 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12365 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
12366 1.38629 1.38629 1.38629 1.38629
12367 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12368 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
12369 1.38629 1.38629 1.38629 1.38629
12370 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12371 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
12372 1.38629 1.38629 1.38629 1.38629
12373 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12374 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
12375 1.38629 1.38629 1.38629 1.38629
12376 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12377 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
12378 1.38629 1.38629 1.38629 1.38629
12379 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12380 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
12381 1.38629 1.38629 1.38629 1.38629
12382 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12383 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
12384 1.38629 1.38629 1.38629 1.38629
12385 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12386 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
12387 1.38629 1.38629 1.38629 1.38629
12388 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12389 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
12390 1.38629 1.38629 1.38629 1.38629
12391 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12392 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
12393 1.38629 1.38629 1.38629 1.38629
12394 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12395 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
12396 1.38629 1.38629 1.38629 1.38629
12397 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12398 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
12399 1.38629 1.38629 1.38629 1.38629
12400 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12401 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
12402 1.38629 1.38629 1.38629 1.38629
12403 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12404 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
12405 1.38629 1.38629 1.38629 1.38629
12406 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12407 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
12408 1.38629 1.38629 1.38629 1.38629
12409 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12410 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
12411 1.38629 1.38629 1.38629 1.38629
12412 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12413 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
12414 1.38629 1.38629 1.38629 1.38629
12415 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12416 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
12417 1.38629 1.38629 1.38629 1.38629
12418 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12419 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
12420 1.38629 1.38629 1.38629 1.38629
12421 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12422 67 2.38910 2.82844 0.25233 2.62837 67 g - - -
12423 1.38629 1.38629 1.38629 1.38629
12424 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12425 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
12426 1.38629 1.38629 1.38629 1.38629
12427 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12428 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
12429 1.38629 1.38629 1.38629 1.38629
12430 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12431 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
12432 1.38629 1.38629 1.38629 1.38629
12433 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
12434 71 1.91091 1.78233 1.95844 0.61114 71 t - - -
12435 1.38629 1.38629 1.38629 1.38629
12436 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
12437 72 1.97267 2.25870 0.46443 2.05625 72 g - - -
12438 1.38629 1.38629 1.38629 1.38629
12439 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
12440 73 0.56139 2.08489 1.86185 1.89791 73 a - - -
12441 1.38629 1.38629 1.38629 1.38629
12442 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
12443 74 1.97267 2.25870 0.46443 2.05625 74 g - - -
12444 1.38629 1.38629 1.38629 1.38629
12445 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
12446 75 1.97267 2.25870 0.46443 2.05625 75 g - - -
12447 1.38629 1.38629 1.38629 1.38629
12448 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
12449 76 0.56139 2.08489 1.86185 1.89791 76 a - - -
12450 1.38629 1.38629 1.38629 1.38629
12451 0.03279 3.43399 * 1.46634 0.26236 0.00000 *
12452 //
12453 HMMER3/f [3.2.1 | June 2018]
12454 NAME long.52.aln
12455 LENG 70
12456 MAXL 160
12457 ALPH DNA
12458 RF no
12459 MM no
12460 CONS yes
12461 CS no
12462 MAP yes
12463 DATE Tue May 28 13:12:03 2019
12464 NSEQ 2
12465 EFFN 2.000000
12466 CKSUM 62394181
12467 STATS LOCAL MSV -8.0100 0.72072
12468 STATS LOCAL VITERBI -9.3118 0.72072
12469 STATS LOCAL FORWARD -3.5566 0.72072
12470 HMM A C G T
12471 m->m m->i m->d i->m i->i d->m d->d
12472 COMPO 1.38092 1.39925 1.37704 1.38812
12473 1.38629 1.38629 1.38629 1.38629
12474 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
12475 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
12476 1.38629 1.38629 1.38629 1.38629
12477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12478 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
12479 1.38629 1.38629 1.38629 1.38629
12480 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12481 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
12482 1.38629 1.38629 1.38629 1.38629
12483 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12484 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
12485 1.38629 1.38629 1.38629 1.38629
12486 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12487 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
12488 1.38629 1.38629 1.38629 1.38629
12489 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12490 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
12491 1.38629 1.38629 1.38629 1.38629
12492 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12493 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
12494 1.38629 1.38629 1.38629 1.38629
12495 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12496 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
12497 1.38629 1.38629 1.38629 1.38629
12498 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12499 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
12500 1.38629 1.38629 1.38629 1.38629
12501 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12502 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
12503 1.38629 1.38629 1.38629 1.38629
12504 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12505 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
12506 1.38629 1.38629 1.38629 1.38629
12507 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12508 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
12509 1.38629 1.38629 1.38629 1.38629
12510 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12511 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
12512 1.38629 1.38629 1.38629 1.38629
12513 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12514 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
12515 1.38629 1.38629 1.38629 1.38629
12516 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12517 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
12518 1.38629 1.38629 1.38629 1.38629
12519 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12520 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
12521 1.38629 1.38629 1.38629 1.38629
12522 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12523 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
12524 1.38629 1.38629 1.38629 1.38629
12525 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12526 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
12527 1.38629 1.38629 1.38629 1.38629
12528 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12529 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
12530 1.38629 1.38629 1.38629 1.38629
12531 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12532 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
12533 1.38629 1.38629 1.38629 1.38629
12534 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12535 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
12536 1.38629 1.38629 1.38629 1.38629
12537 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12538 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
12539 1.38629 1.38629 1.38629 1.38629
12540 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12541 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
12542 1.38629 1.38629 1.38629 1.38629
12543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12544 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
12545 1.38629 1.38629 1.38629 1.38629
12546 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12547 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
12548 1.38629 1.38629 1.38629 1.38629
12549 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12550 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
12551 1.38629 1.38629 1.38629 1.38629
12552 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12553 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
12554 1.38629 1.38629 1.38629 1.38629
12555 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12556 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
12557 1.38629 1.38629 1.38629 1.38629
12558 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12559 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
12560 1.38629 1.38629 1.38629 1.38629
12561 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12562 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
12563 1.38629 1.38629 1.38629 1.38629
12564 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12565 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
12566 1.38629 1.38629 1.38629 1.38629
12567 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12568 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
12569 1.38629 1.38629 1.38629 1.38629
12570 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12571 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
12572 1.38629 1.38629 1.38629 1.38629
12573 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12574 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
12575 1.38629 1.38629 1.38629 1.38629
12576 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12577 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
12578 1.38629 1.38629 1.38629 1.38629
12579 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12580 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
12581 1.38629 1.38629 1.38629 1.38629
12582 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12583 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
12584 1.38629 1.38629 1.38629 1.38629
12585 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12586 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
12587 1.38629 1.38629 1.38629 1.38629
12588 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12589 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
12590 1.38629 1.38629 1.38629 1.38629
12591 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12592 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
12593 1.38629 1.38629 1.38629 1.38629
12594 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12595 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
12596 1.38629 1.38629 1.38629 1.38629
12597 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12598 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
12599 1.38629 1.38629 1.38629 1.38629
12600 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12601 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
12602 1.38629 1.38629 1.38629 1.38629
12603 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12604 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
12605 1.38629 1.38629 1.38629 1.38629
12606 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12607 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
12608 1.38629 1.38629 1.38629 1.38629
12609 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12610 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
12611 1.38629 1.38629 1.38629 1.38629
12612 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12613 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
12614 1.38629 1.38629 1.38629 1.38629
12615 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12616 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
12617 1.38629 1.38629 1.38629 1.38629
12618 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12619 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
12620 1.38629 1.38629 1.38629 1.38629
12621 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12622 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
12623 1.38629 1.38629 1.38629 1.38629
12624 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12625 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
12626 1.38629 1.38629 1.38629 1.38629
12627 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12628 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
12629 1.38629 1.38629 1.38629 1.38629
12630 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12631 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
12632 1.38629 1.38629 1.38629 1.38629
12633 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12634 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
12635 1.38629 1.38629 1.38629 1.38629
12636 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12637 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
12638 1.38629 1.38629 1.38629 1.38629
12639 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12640 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
12641 1.38629 1.38629 1.38629 1.38629
12642 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12643 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
12644 1.38629 1.38629 1.38629 1.38629
12645 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12646 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
12647 1.38629 1.38629 1.38629 1.38629
12648 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12649 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
12650 1.38629 1.38629 1.38629 1.38629
12651 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12652 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
12653 1.38629 1.38629 1.38629 1.38629
12654 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12655 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
12656 1.38629 1.38629 1.38629 1.38629
12657 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12658 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
12659 1.38629 1.38629 1.38629 1.38629
12660 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12661 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
12662 1.38629 1.38629 1.38629 1.38629
12663 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12664 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
12665 1.38629 1.38629 1.38629 1.38629
12666 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12667 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
12668 1.38629 1.38629 1.38629 1.38629
12669 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12670 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
12671 1.38629 1.38629 1.38629 1.38629
12672 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12673 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
12674 1.38629 1.38629 1.38629 1.38629
12675 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12676 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
12677 1.38629 1.38629 1.38629 1.38629
12678 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12679 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
12680 1.38629 1.38629 1.38629 1.38629
12681 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12682 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
12683 1.38629 1.38629 1.38629 1.38629
12684 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
12685 //
12686 HMMER3/f [3.2.1 | June 2018]
12687 NAME long.53.aln
12688 LENG 70
12689 MAXL 160
12690 ALPH DNA
12691 RF no
12692 MM no
12693 CONS yes
12694 CS no
12695 MAP yes
12696 DATE Tue May 28 13:12:04 2019
12697 NSEQ 2
12698 EFFN 2.000000
12699 CKSUM 4138962244
12700 STATS LOCAL MSV -7.9188 0.72028
12701 STATS LOCAL VITERBI -9.2113 0.72028
12702 STATS LOCAL FORWARD -3.4388 0.72028
12703 HMM A C G T
12704 m->m m->i m->d i->m i->i d->m d->d
12705 COMPO 1.16628 1.58889 1.37387 1.46448
12706 1.38629 1.38629 1.38629 1.38629
12707 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
12708 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
12709 1.38629 1.38629 1.38629 1.38629
12710 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12711 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
12712 1.38629 1.38629 1.38629 1.38629
12713 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12714 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
12715 1.38629 1.38629 1.38629 1.38629
12716 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12717 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
12718 1.38629 1.38629 1.38629 1.38629
12719 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12720 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
12721 1.38629 1.38629 1.38629 1.38629
12722 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12723 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
12724 1.38629 1.38629 1.38629 1.38629
12725 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12726 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
12727 1.38629 1.38629 1.38629 1.38629
12728 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12729 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
12730 1.38629 1.38629 1.38629 1.38629
12731 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12732 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
12733 1.38629 1.38629 1.38629 1.38629
12734 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12735 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
12736 1.38629 1.38629 1.38629 1.38629
12737 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12738 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
12739 1.38629 1.38629 1.38629 1.38629
12740 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12741 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
12742 1.38629 1.38629 1.38629 1.38629
12743 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12744 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
12745 1.38629 1.38629 1.38629 1.38629
12746 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12747 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
12748 1.38629 1.38629 1.38629 1.38629
12749 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12750 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
12751 1.38629 1.38629 1.38629 1.38629
12752 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12753 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
12754 1.38629 1.38629 1.38629 1.38629
12755 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12756 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
12757 1.38629 1.38629 1.38629 1.38629
12758 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12759 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
12760 1.38629 1.38629 1.38629 1.38629
12761 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12762 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
12763 1.38629 1.38629 1.38629 1.38629
12764 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12765 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
12766 1.38629 1.38629 1.38629 1.38629
12767 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12768 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
12769 1.38629 1.38629 1.38629 1.38629
12770 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12771 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
12772 1.38629 1.38629 1.38629 1.38629
12773 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12774 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
12775 1.38629 1.38629 1.38629 1.38629
12776 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12777 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
12778 1.38629 1.38629 1.38629 1.38629
12779 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12780 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
12781 1.38629 1.38629 1.38629 1.38629
12782 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12783 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
12784 1.38629 1.38629 1.38629 1.38629
12785 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12786 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
12787 1.38629 1.38629 1.38629 1.38629
12788 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12789 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
12790 1.38629 1.38629 1.38629 1.38629
12791 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12792 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
12793 1.38629 1.38629 1.38629 1.38629
12794 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12795 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
12796 1.38629 1.38629 1.38629 1.38629
12797 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12798 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
12799 1.38629 1.38629 1.38629 1.38629
12800 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12801 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
12802 1.38629 1.38629 1.38629 1.38629
12803 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12804 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
12805 1.38629 1.38629 1.38629 1.38629
12806 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12807 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
12808 1.38629 1.38629 1.38629 1.38629
12809 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12810 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
12811 1.38629 1.38629 1.38629 1.38629
12812 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12813 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
12814 1.38629 1.38629 1.38629 1.38629
12815 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12816 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
12817 1.38629 1.38629 1.38629 1.38629
12818 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12819 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
12820 1.38629 1.38629 1.38629 1.38629
12821 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12822 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
12823 1.38629 1.38629 1.38629 1.38629
12824 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12825 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
12826 1.38629 1.38629 1.38629 1.38629
12827 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12828 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
12829 1.38629 1.38629 1.38629 1.38629
12830 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12831 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
12832 1.38629 1.38629 1.38629 1.38629
12833 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12834 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
12835 1.38629 1.38629 1.38629 1.38629
12836 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12837 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
12838 1.38629 1.38629 1.38629 1.38629
12839 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12840 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
12841 1.38629 1.38629 1.38629 1.38629
12842 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12843 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
12844 1.38629 1.38629 1.38629 1.38629
12845 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12846 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
12847 1.38629 1.38629 1.38629 1.38629
12848 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12849 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
12850 1.38629 1.38629 1.38629 1.38629
12851 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12852 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
12853 1.38629 1.38629 1.38629 1.38629
12854 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12855 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
12856 1.38629 1.38629 1.38629 1.38629
12857 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12858 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
12859 1.38629 1.38629 1.38629 1.38629
12860 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12861 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
12862 1.38629 1.38629 1.38629 1.38629
12863 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12864 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
12865 1.38629 1.38629 1.38629 1.38629
12866 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12867 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
12868 1.38629 1.38629 1.38629 1.38629
12869 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12870 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
12871 1.38629 1.38629 1.38629 1.38629
12872 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12873 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
12874 1.38629 1.38629 1.38629 1.38629
12875 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12876 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
12877 1.38629 1.38629 1.38629 1.38629
12878 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12879 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
12880 1.38629 1.38629 1.38629 1.38629
12881 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12882 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
12883 1.38629 1.38629 1.38629 1.38629
12884 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12885 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
12886 1.38629 1.38629 1.38629 1.38629
12887 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12888 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
12889 1.38629 1.38629 1.38629 1.38629
12890 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12891 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
12892 1.38629 1.38629 1.38629 1.38629
12893 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12894 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
12895 1.38629 1.38629 1.38629 1.38629
12896 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12897 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
12898 1.38629 1.38629 1.38629 1.38629
12899 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12900 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
12901 1.38629 1.38629 1.38629 1.38629
12902 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12903 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
12904 1.38629 1.38629 1.38629 1.38629
12905 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12906 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
12907 1.38629 1.38629 1.38629 1.38629
12908 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12909 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
12910 1.38629 1.38629 1.38629 1.38629
12911 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12912 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
12913 1.38629 1.38629 1.38629 1.38629
12914 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12915 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
12916 1.38629 1.38629 1.38629 1.38629
12917 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
12918 //
12919 HMMER3/f [3.2.1 | June 2018]
12920 NAME long.54.aln
12921 LENG 70
12922 MAXL 160
12923 ALPH DNA
12924 RF no
12925 MM no
12926 CONS yes
12927 CS no
12928 MAP yes
12929 DATE Tue May 28 13:12:04 2019
12930 NSEQ 2
12931 EFFN 2.000000
12932 CKSUM 677277550
12933 STATS LOCAL MSV -7.8511 0.72028
12934 STATS LOCAL VITERBI -9.3045 0.72028
12935 STATS LOCAL FORWARD -3.4387 0.72028
12936 HMM A C G T
12937 m->m m->i m->d i->m i->i d->m d->d
12938 COMPO 0.99121 1.67344 1.52419 1.49846
12939 1.38629 1.38629 1.38629 1.38629
12940 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
12941 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
12942 1.38629 1.38629 1.38629 1.38629
12943 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12944 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
12945 1.38629 1.38629 1.38629 1.38629
12946 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12947 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
12948 1.38629 1.38629 1.38629 1.38629
12949 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12950 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
12951 1.38629 1.38629 1.38629 1.38629
12952 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12953 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
12954 1.38629 1.38629 1.38629 1.38629
12955 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12956 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
12957 1.38629 1.38629 1.38629 1.38629
12958 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12959 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
12960 1.38629 1.38629 1.38629 1.38629
12961 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12962 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
12963 1.38629 1.38629 1.38629 1.38629
12964 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12965 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
12966 1.38629 1.38629 1.38629 1.38629
12967 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12968 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
12969 1.38629 1.38629 1.38629 1.38629
12970 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12971 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
12972 1.38629 1.38629 1.38629 1.38629
12973 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12974 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
12975 1.38629 1.38629 1.38629 1.38629
12976 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12977 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
12978 1.38629 1.38629 1.38629 1.38629
12979 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12980 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
12981 1.38629 1.38629 1.38629 1.38629
12982 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12983 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
12984 1.38629 1.38629 1.38629 1.38629
12985 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12986 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
12987 1.38629 1.38629 1.38629 1.38629
12988 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12989 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
12990 1.38629 1.38629 1.38629 1.38629
12991 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12992 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
12993 1.38629 1.38629 1.38629 1.38629
12994 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12995 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
12996 1.38629 1.38629 1.38629 1.38629
12997 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12998 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
12999 1.38629 1.38629 1.38629 1.38629
13000 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13001 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
13002 1.38629 1.38629 1.38629 1.38629
13003 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13004 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
13005 1.38629 1.38629 1.38629 1.38629
13006 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13007 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
13008 1.38629 1.38629 1.38629 1.38629
13009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13010 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
13011 1.38629 1.38629 1.38629 1.38629
13012 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13013 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
13014 1.38629 1.38629 1.38629 1.38629
13015 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13016 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
13017 1.38629 1.38629 1.38629 1.38629
13018 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13019 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
13020 1.38629 1.38629 1.38629 1.38629
13021 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13022 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
13023 1.38629 1.38629 1.38629 1.38629
13024 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13025 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
13026 1.38629 1.38629 1.38629 1.38629
13027 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13028 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
13029 1.38629 1.38629 1.38629 1.38629
13030 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13031 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
13032 1.38629 1.38629 1.38629 1.38629
13033 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13034 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
13035 1.38629 1.38629 1.38629 1.38629
13036 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13037 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
13038 1.38629 1.38629 1.38629 1.38629
13039 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13040 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
13041 1.38629 1.38629 1.38629 1.38629
13042 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13043 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
13044 1.38629 1.38629 1.38629 1.38629
13045 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13046 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
13047 1.38629 1.38629 1.38629 1.38629
13048 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13049 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
13050 1.38629 1.38629 1.38629 1.38629
13051 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13052 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
13053 1.38629 1.38629 1.38629 1.38629
13054 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13055 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
13056 1.38629 1.38629 1.38629 1.38629
13057 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13058 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
13059 1.38629 1.38629 1.38629 1.38629
13060 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13061 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
13062 1.38629 1.38629 1.38629 1.38629
13063 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13064 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
13065 1.38629 1.38629 1.38629 1.38629
13066 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13067 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
13068 1.38629 1.38629 1.38629 1.38629
13069 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13070 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
13071 1.38629 1.38629 1.38629 1.38629
13072 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13073 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
13074 1.38629 1.38629 1.38629 1.38629
13075 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13076 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
13077 1.38629 1.38629 1.38629 1.38629
13078 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13079 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
13080 1.38629 1.38629 1.38629 1.38629
13081 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13082 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
13083 1.38629 1.38629 1.38629 1.38629
13084 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13085 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
13086 1.38629 1.38629 1.38629 1.38629
13087 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13088 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
13089 1.38629 1.38629 1.38629 1.38629
13090 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13091 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
13092 1.38629 1.38629 1.38629 1.38629
13093 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13094 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
13095 1.38629 1.38629 1.38629 1.38629
13096 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13097 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
13098 1.38629 1.38629 1.38629 1.38629
13099 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13100 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
13101 1.38629 1.38629 1.38629 1.38629
13102 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13103 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
13104 1.38629 1.38629 1.38629 1.38629
13105 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13106 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
13107 1.38629 1.38629 1.38629 1.38629
13108 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13109 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
13110 1.38629 1.38629 1.38629 1.38629
13111 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13112 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
13113 1.38629 1.38629 1.38629 1.38629
13114 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13115 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
13116 1.38629 1.38629 1.38629 1.38629
13117 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13118 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
13119 1.38629 1.38629 1.38629 1.38629
13120 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13121 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
13122 1.38629 1.38629 1.38629 1.38629
13123 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13124 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
13125 1.38629 1.38629 1.38629 1.38629
13126 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13127 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
13128 1.38629 1.38629 1.38629 1.38629
13129 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13130 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
13131 1.38629 1.38629 1.38629 1.38629
13132 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13133 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
13134 1.38629 1.38629 1.38629 1.38629
13135 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13136 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
13137 1.38629 1.38629 1.38629 1.38629
13138 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13139 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
13140 1.38629 1.38629 1.38629 1.38629
13141 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13142 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
13143 1.38629 1.38629 1.38629 1.38629
13144 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13145 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
13146 1.38629 1.38629 1.38629 1.38629
13147 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13148 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
13149 1.38629 1.38629 1.38629 1.38629
13150 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
13151 //
13152 HMMER3/f [3.2.1 | June 2018]
13153 NAME long.55.aln
13154 LENG 70
13155 MAXL 160
13156 ALPH DNA
13157 RF no
13158 MM no
13159 CONS yes
13160 CS no
13161 MAP yes
13162 DATE Tue May 28 13:12:04 2019
13163 NSEQ 2
13164 EFFN 2.000000
13165 CKSUM 270279876
13166 STATS LOCAL MSV -8.2600 0.72111
13167 STATS LOCAL VITERBI -9.2516 0.72111
13168 STATS LOCAL FORWARD -3.7652 0.72111
13169 HMM A C G T
13170 m->m m->i m->d i->m i->i d->m d->d
13171 COMPO 1.44455 1.60151 1.37316 1.17360
13172 1.38629 1.38629 1.38629 1.38629
13173 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
13174 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
13175 1.38629 1.38629 1.38629 1.38629
13176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13177 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
13178 1.38629 1.38629 1.38629 1.38629
13179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13180 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
13181 1.38629 1.38629 1.38629 1.38629
13182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13183 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
13184 1.38629 1.38629 1.38629 1.38629
13185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13186 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
13187 1.38629 1.38629 1.38629 1.38629
13188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13189 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
13190 1.38629 1.38629 1.38629 1.38629
13191 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13192 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
13193 1.38629 1.38629 1.38629 1.38629
13194 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13195 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
13196 1.38629 1.38629 1.38629 1.38629
13197 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13198 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
13199 1.38629 1.38629 1.38629 1.38629
13200 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13201 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
13202 1.38629 1.38629 1.38629 1.38629
13203 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13204 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
13205 1.38629 1.38629 1.38629 1.38629
13206 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13207 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
13208 1.38629 1.38629 1.38629 1.38629
13209 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13210 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
13211 1.38629 1.38629 1.38629 1.38629
13212 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13213 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
13214 1.38629 1.38629 1.38629 1.38629
13215 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13216 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
13217 1.38629 1.38629 1.38629 1.38629
13218 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13219 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
13220 1.38629 1.38629 1.38629 1.38629
13221 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13222 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
13223 1.38629 1.38629 1.38629 1.38629
13224 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13225 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
13226 1.38629 1.38629 1.38629 1.38629
13227 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13228 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
13229 1.38629 1.38629 1.38629 1.38629
13230 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13231 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
13232 1.38629 1.38629 1.38629 1.38629
13233 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13234 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
13235 1.38629 1.38629 1.38629 1.38629
13236 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13237 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
13238 1.38629 1.38629 1.38629 1.38629
13239 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13240 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
13241 1.38629 1.38629 1.38629 1.38629
13242 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13243 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
13244 1.38629 1.38629 1.38629 1.38629
13245 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13246 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
13247 1.38629 1.38629 1.38629 1.38629
13248 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13249 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
13250 1.38629 1.38629 1.38629 1.38629
13251 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13252 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
13253 1.38629 1.38629 1.38629 1.38629
13254 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13255 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
13256 1.38629 1.38629 1.38629 1.38629
13257 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13258 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
13259 1.38629 1.38629 1.38629 1.38629
13260 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13261 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
13262 1.38629 1.38629 1.38629 1.38629
13263 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13264 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
13265 1.38629 1.38629 1.38629 1.38629
13266 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13267 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
13268 1.38629 1.38629 1.38629 1.38629
13269 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13270 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
13271 1.38629 1.38629 1.38629 1.38629
13272 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13273 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
13274 1.38629 1.38629 1.38629 1.38629
13275 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13276 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
13277 1.38629 1.38629 1.38629 1.38629
13278 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13279 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
13280 1.38629 1.38629 1.38629 1.38629
13281 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13282 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
13283 1.38629 1.38629 1.38629 1.38629
13284 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13285 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
13286 1.38629 1.38629 1.38629 1.38629
13287 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13288 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
13289 1.38629 1.38629 1.38629 1.38629
13290 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13291 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
13292 1.38629 1.38629 1.38629 1.38629
13293 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13294 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
13295 1.38629 1.38629 1.38629 1.38629
13296 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13297 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
13298 1.38629 1.38629 1.38629 1.38629
13299 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13300 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
13301 1.38629 1.38629 1.38629 1.38629
13302 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13303 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
13304 1.38629 1.38629 1.38629 1.38629
13305 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13306 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
13307 1.38629 1.38629 1.38629 1.38629
13308 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13309 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
13310 1.38629 1.38629 1.38629 1.38629
13311 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13312 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
13313 1.38629 1.38629 1.38629 1.38629
13314 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13315 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
13316 1.38629 1.38629 1.38629 1.38629
13317 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13318 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
13319 1.38629 1.38629 1.38629 1.38629
13320 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13321 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
13322 1.38629 1.38629 1.38629 1.38629
13323 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13324 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
13325 1.38629 1.38629 1.38629 1.38629
13326 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13327 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
13328 1.38629 1.38629 1.38629 1.38629
13329 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13330 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
13331 1.38629 1.38629 1.38629 1.38629
13332 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13333 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
13334 1.38629 1.38629 1.38629 1.38629
13335 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13336 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
13337 1.38629 1.38629 1.38629 1.38629
13338 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13339 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
13340 1.38629 1.38629 1.38629 1.38629
13341 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13342 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
13343 1.38629 1.38629 1.38629 1.38629
13344 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13345 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
13346 1.38629 1.38629 1.38629 1.38629
13347 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13348 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
13349 1.38629 1.38629 1.38629 1.38629
13350 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13351 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
13352 1.38629 1.38629 1.38629 1.38629
13353 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13354 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
13355 1.38629 1.38629 1.38629 1.38629
13356 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13357 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
13358 1.38629 1.38629 1.38629 1.38629
13359 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13360 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
13361 1.38629 1.38629 1.38629 1.38629
13362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13363 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
13364 1.38629 1.38629 1.38629 1.38629
13365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13366 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
13367 1.38629 1.38629 1.38629 1.38629
13368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13369 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
13370 1.38629 1.38629 1.38629 1.38629
13371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13372 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
13373 1.38629 1.38629 1.38629 1.38629
13374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13375 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
13376 1.38629 1.38629 1.38629 1.38629
13377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13378 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
13379 1.38629 1.38629 1.38629 1.38629
13380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13381 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
13382 1.38629 1.38629 1.38629 1.38629
13383 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
13384 //
13385 HMMER3/f [3.2.1 | June 2018]
13386 NAME long.56.aln
13387 LENG 70
13388 MAXL 160
13389 ALPH DNA
13390 RF no
13391 MM no
13392 CONS yes
13393 CS no
13394 MAP yes
13395 DATE Tue May 28 13:12:03 2019
13396 NSEQ 2
13397 EFFN 2.000000
13398 CKSUM 3045280856
13399 STATS LOCAL MSV -8.0658 0.72163
13400 STATS LOCAL VITERBI -9.3021 0.72163
13401 STATS LOCAL FORWARD -3.6953 0.72163
13402 HMM A C G T
13403 m->m m->i m->d i->m i->i d->m d->d
13404 COMPO 1.41320 1.34805 1.61527 1.21049
13405 1.38629 1.38629 1.38629 1.38629
13406 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
13407 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
13408 1.38629 1.38629 1.38629 1.38629
13409 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13410 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
13411 1.38629 1.38629 1.38629 1.38629
13412 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13413 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
13414 1.38629 1.38629 1.38629 1.38629
13415 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13416 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
13417 1.38629 1.38629 1.38629 1.38629
13418 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13419 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
13420 1.38629 1.38629 1.38629 1.38629
13421 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13422 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
13423 1.38629 1.38629 1.38629 1.38629
13424 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13425 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
13426 1.38629 1.38629 1.38629 1.38629
13427 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13428 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
13429 1.38629 1.38629 1.38629 1.38629
13430 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13431 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
13432 1.38629 1.38629 1.38629 1.38629
13433 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13434 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
13435 1.38629 1.38629 1.38629 1.38629
13436 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13437 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
13438 1.38629 1.38629 1.38629 1.38629
13439 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13440 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
13441 1.38629 1.38629 1.38629 1.38629
13442 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13443 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
13444 1.38629 1.38629 1.38629 1.38629
13445 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13446 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
13447 1.38629 1.38629 1.38629 1.38629
13448 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13449 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
13450 1.38629 1.38629 1.38629 1.38629
13451 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13452 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
13453 1.38629 1.38629 1.38629 1.38629
13454 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13455 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
13456 1.38629 1.38629 1.38629 1.38629
13457 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13458 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
13459 1.38629 1.38629 1.38629 1.38629
13460 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13461 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
13462 1.38629 1.38629 1.38629 1.38629
13463 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13464 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
13465 1.38629 1.38629 1.38629 1.38629
13466 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13467 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
13468 1.38629 1.38629 1.38629 1.38629
13469 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13470 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
13471 1.38629 1.38629 1.38629 1.38629
13472 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13473 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
13474 1.38629 1.38629 1.38629 1.38629
13475 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13476 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
13477 1.38629 1.38629 1.38629 1.38629
13478 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13479 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
13480 1.38629 1.38629 1.38629 1.38629
13481 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13482 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
13483 1.38629 1.38629 1.38629 1.38629
13484 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13485 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
13486 1.38629 1.38629 1.38629 1.38629
13487 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13488 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
13489 1.38629 1.38629 1.38629 1.38629
13490 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13491 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
13492 1.38629 1.38629 1.38629 1.38629
13493 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13494 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
13495 1.38629 1.38629 1.38629 1.38629
13496 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13497 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
13498 1.38629 1.38629 1.38629 1.38629
13499 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13500 32 2.38910 2.82844 0.25233 2.62837 32 g - - -
13501 1.38629 1.38629 1.38629 1.38629
13502 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13503 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
13504 1.38629 1.38629 1.38629 1.38629
13505 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13506 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
13507 1.38629 1.38629 1.38629 1.38629
13508 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13509 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
13510 1.38629 1.38629 1.38629 1.38629
13511 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13512 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
13513 1.38629 1.38629 1.38629 1.38629
13514 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13515 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
13516 1.38629 1.38629 1.38629 1.38629
13517 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13518 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
13519 1.38629 1.38629 1.38629 1.38629
13520 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13521 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
13522 1.38629 1.38629 1.38629 1.38629
13523 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13524 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
13525 1.38629 1.38629 1.38629 1.38629
13526 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13527 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
13528 1.38629 1.38629 1.38629 1.38629
13529 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13530 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
13531 1.38629 1.38629 1.38629 1.38629
13532 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13533 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
13534 1.38629 1.38629 1.38629 1.38629
13535 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13536 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
13537 1.38629 1.38629 1.38629 1.38629
13538 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13539 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
13540 1.38629 1.38629 1.38629 1.38629
13541 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13542 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
13543 1.38629 1.38629 1.38629 1.38629
13544 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13545 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
13546 1.38629 1.38629 1.38629 1.38629
13547 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13548 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
13549 1.38629 1.38629 1.38629 1.38629
13550 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13551 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
13552 1.38629 1.38629 1.38629 1.38629
13553 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13554 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
13555 1.38629 1.38629 1.38629 1.38629
13556 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13557 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
13558 1.38629 1.38629 1.38629 1.38629
13559 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13560 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
13561 1.38629 1.38629 1.38629 1.38629
13562 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13563 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
13564 1.38629 1.38629 1.38629 1.38629
13565 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13566 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
13567 1.38629 1.38629 1.38629 1.38629
13568 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13569 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
13570 1.38629 1.38629 1.38629 1.38629
13571 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13572 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
13573 1.38629 1.38629 1.38629 1.38629
13574 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13575 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
13576 1.38629 1.38629 1.38629 1.38629
13577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13578 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
13579 1.38629 1.38629 1.38629 1.38629
13580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13581 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
13582 1.38629 1.38629 1.38629 1.38629
13583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13584 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
13585 1.38629 1.38629 1.38629 1.38629
13586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13587 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
13588 1.38629 1.38629 1.38629 1.38629
13589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13590 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
13591 1.38629 1.38629 1.38629 1.38629
13592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13593 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
13594 1.38629 1.38629 1.38629 1.38629
13595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13596 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
13597 1.38629 1.38629 1.38629 1.38629
13598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13599 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
13600 1.38629 1.38629 1.38629 1.38629
13601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13602 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
13603 1.38629 1.38629 1.38629 1.38629
13604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13605 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
13606 1.38629 1.38629 1.38629 1.38629
13607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13608 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
13609 1.38629 1.38629 1.38629 1.38629
13610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13611 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
13612 1.38629 1.38629 1.38629 1.38629
13613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13614 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
13615 1.38629 1.38629 1.38629 1.38629
13616 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
13617 //
13618 HMMER3/f [3.2.1 | June 2018]
13619 NAME long.57.aln
13620 LENG 70
13621 MAXL 160
13622 ALPH DNA
13623 RF no
13624 MM no
13625 CONS yes
13626 CS no
13627 MAP yes
13628 DATE Tue May 28 13:12:04 2019
13629 NSEQ 2
13630 EFFN 2.000000
13631 CKSUM 2156877472
13632 STATS LOCAL MSV -8.0137 0.72176
13633 STATS LOCAL VITERBI -9.3146 0.72176
13634 STATS LOCAL FORWARD -3.2022 0.72176
13635 HMM A C G T
13636 m->m m->i m->d i->m i->i d->m d->d
13637 COMPO 1.37567 1.54761 1.60818 1.09564
13638 1.38629 1.38629 1.38629 1.38629
13639 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
13640 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
13641 1.38629 1.38629 1.38629 1.38629
13642 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13643 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
13644 1.38629 1.38629 1.38629 1.38629
13645 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13646 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
13647 1.38629 1.38629 1.38629 1.38629
13648 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13649 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
13650 1.38629 1.38629 1.38629 1.38629
13651 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13652 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
13653 1.38629 1.38629 1.38629 1.38629
13654 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13655 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
13656 1.38629 1.38629 1.38629 1.38629
13657 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13658 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
13659 1.38629 1.38629 1.38629 1.38629
13660 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13661 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
13662 1.38629 1.38629 1.38629 1.38629
13663 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13664 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
13665 1.38629 1.38629 1.38629 1.38629
13666 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13667 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
13668 1.38629 1.38629 1.38629 1.38629
13669 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13670 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
13671 1.38629 1.38629 1.38629 1.38629
13672 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13673 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
13674 1.38629 1.38629 1.38629 1.38629
13675 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13676 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
13677 1.38629 1.38629 1.38629 1.38629
13678 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13679 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
13680 1.38629 1.38629 1.38629 1.38629
13681 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13682 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
13683 1.38629 1.38629 1.38629 1.38629
13684 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13685 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
13686 1.38629 1.38629 1.38629 1.38629
13687 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13688 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
13689 1.38629 1.38629 1.38629 1.38629
13690 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13691 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
13692 1.38629 1.38629 1.38629 1.38629
13693 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13694 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
13695 1.38629 1.38629 1.38629 1.38629
13696 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13697 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
13698 1.38629 1.38629 1.38629 1.38629
13699 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13700 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
13701 1.38629 1.38629 1.38629 1.38629
13702 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13703 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
13704 1.38629 1.38629 1.38629 1.38629
13705 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13706 23 2.38910 2.82844 0.25233 2.62837 23 g - - -
13707 1.38629 1.38629 1.38629 1.38629
13708 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13709 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
13710 1.38629 1.38629 1.38629 1.38629
13711 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13712 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
13713 1.38629 1.38629 1.38629 1.38629
13714 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13715 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
13716 1.38629 1.38629 1.38629 1.38629
13717 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13718 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
13719 1.38629 1.38629 1.38629 1.38629
13720 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13721 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
13722 1.38629 1.38629 1.38629 1.38629
13723 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13724 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
13725 1.38629 1.38629 1.38629 1.38629
13726 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13727 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
13728 1.38629 1.38629 1.38629 1.38629
13729 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13730 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
13731 1.38629 1.38629 1.38629 1.38629
13732 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13733 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
13734 1.38629 1.38629 1.38629 1.38629
13735 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13736 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
13737 1.38629 1.38629 1.38629 1.38629
13738 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13739 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
13740 1.38629 1.38629 1.38629 1.38629
13741 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13742 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
13743 1.38629 1.38629 1.38629 1.38629
13744 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13745 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
13746 1.38629 1.38629 1.38629 1.38629
13747 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13748 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
13749 1.38629 1.38629 1.38629 1.38629
13750 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13751 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
13752 1.38629 1.38629 1.38629 1.38629
13753 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13754 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
13755 1.38629 1.38629 1.38629 1.38629
13756 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13757 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
13758 1.38629 1.38629 1.38629 1.38629
13759 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13760 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
13761 1.38629 1.38629 1.38629 1.38629
13762 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13763 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
13764 1.38629 1.38629 1.38629 1.38629
13765 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13766 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
13767 1.38629 1.38629 1.38629 1.38629
13768 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13769 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
13770 1.38629 1.38629 1.38629 1.38629
13771 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13772 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
13773 1.38629 1.38629 1.38629 1.38629
13774 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13775 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
13776 1.38629 1.38629 1.38629 1.38629
13777 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13778 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
13779 1.38629 1.38629 1.38629 1.38629
13780 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13781 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
13782 1.38629 1.38629 1.38629 1.38629
13783 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13784 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
13785 1.38629 1.38629 1.38629 1.38629
13786 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13787 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
13788 1.38629 1.38629 1.38629 1.38629
13789 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13790 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
13791 1.38629 1.38629 1.38629 1.38629
13792 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13793 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
13794 1.38629 1.38629 1.38629 1.38629
13795 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13796 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
13797 1.38629 1.38629 1.38629 1.38629
13798 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13799 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
13800 1.38629 1.38629 1.38629 1.38629
13801 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13802 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
13803 1.38629 1.38629 1.38629 1.38629
13804 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13805 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
13806 1.38629 1.38629 1.38629 1.38629
13807 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13808 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
13809 1.38629 1.38629 1.38629 1.38629
13810 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13811 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
13812 1.38629 1.38629 1.38629 1.38629
13813 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13814 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
13815 1.38629 1.38629 1.38629 1.38629
13816 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13817 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
13818 1.38629 1.38629 1.38629 1.38629
13819 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13820 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
13821 1.38629 1.38629 1.38629 1.38629
13822 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13823 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
13824 1.38629 1.38629 1.38629 1.38629
13825 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13826 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
13827 1.38629 1.38629 1.38629 1.38629
13828 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13829 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
13830 1.38629 1.38629 1.38629 1.38629
13831 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13832 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
13833 1.38629 1.38629 1.38629 1.38629
13834 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13835 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
13836 1.38629 1.38629 1.38629 1.38629
13837 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13838 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
13839 1.38629 1.38629 1.38629 1.38629
13840 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13841 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
13842 1.38629 1.38629 1.38629 1.38629
13843 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13844 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
13845 1.38629 1.38629 1.38629 1.38629
13846 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13847 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
13848 1.38629 1.38629 1.38629 1.38629
13849 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
13850 //
13851 HMMER3/f [3.2.1 | June 2018]
13852 NAME long.58.aln
13853 LENG 70
13854 MAXL 160
13855 ALPH DNA
13856 RF no
13857 MM no
13858 CONS yes
13859 CS no
13860 MAP yes
13861 DATE Tue May 28 13:12:03 2019
13862 NSEQ 2
13863 EFFN 2.000000
13864 CKSUM 988802922
13865 STATS LOCAL MSV -7.9559 0.72068
13866 STATS LOCAL VITERBI -9.2724 0.72068
13867 STATS LOCAL FORWARD -3.4915 0.72068
13868 HMM A C G T
13869 m->m m->i m->d i->m i->i d->m d->d
13870 COMPO 1.11505 1.47137 1.56700 1.45320
13871 1.38629 1.38629 1.38629 1.38629
13872 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
13873 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
13874 1.38629 1.38629 1.38629 1.38629
13875 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13876 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
13877 1.38629 1.38629 1.38629 1.38629
13878 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13879 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
13880 1.38629 1.38629 1.38629 1.38629
13881 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13882 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
13883 1.38629 1.38629 1.38629 1.38629
13884 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13885 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
13886 1.38629 1.38629 1.38629 1.38629
13887 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13888 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
13889 1.38629 1.38629 1.38629 1.38629
13890 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13891 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
13892 1.38629 1.38629 1.38629 1.38629
13893 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13894 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
13895 1.38629 1.38629 1.38629 1.38629
13896 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13897 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
13898 1.38629 1.38629 1.38629 1.38629
13899 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13900 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
13901 1.38629 1.38629 1.38629 1.38629
13902 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13903 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
13904 1.38629 1.38629 1.38629 1.38629
13905 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13906 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
13907 1.38629 1.38629 1.38629 1.38629
13908 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13909 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
13910 1.38629 1.38629 1.38629 1.38629
13911 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13912 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
13913 1.38629 1.38629 1.38629 1.38629
13914 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13915 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
13916 1.38629 1.38629 1.38629 1.38629
13917 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13918 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
13919 1.38629 1.38629 1.38629 1.38629
13920 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13921 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
13922 1.38629 1.38629 1.38629 1.38629
13923 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13924 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
13925 1.38629 1.38629 1.38629 1.38629
13926 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13927 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
13928 1.38629 1.38629 1.38629 1.38629
13929 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13930 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
13931 1.38629 1.38629 1.38629 1.38629
13932 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13933 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
13934 1.38629 1.38629 1.38629 1.38629
13935 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13936 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
13937 1.38629 1.38629 1.38629 1.38629
13938 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13939 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
13940 1.38629 1.38629 1.38629 1.38629
13941 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13942 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
13943 1.38629 1.38629 1.38629 1.38629
13944 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13945 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
13946 1.38629 1.38629 1.38629 1.38629
13947 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13948 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
13949 1.38629 1.38629 1.38629 1.38629
13950 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13951 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
13952 1.38629 1.38629 1.38629 1.38629
13953 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13954 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
13955 1.38629 1.38629 1.38629 1.38629
13956 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13957 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
13958 1.38629 1.38629 1.38629 1.38629
13959 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13960 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
13961 1.38629 1.38629 1.38629 1.38629
13962 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13963 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
13964 1.38629 1.38629 1.38629 1.38629
13965 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13966 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
13967 1.38629 1.38629 1.38629 1.38629
13968 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13969 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
13970 1.38629 1.38629 1.38629 1.38629
13971 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13972 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
13973 1.38629 1.38629 1.38629 1.38629
13974 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13975 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
13976 1.38629 1.38629 1.38629 1.38629
13977 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13978 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
13979 1.38629 1.38629 1.38629 1.38629
13980 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13981 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
13982 1.38629 1.38629 1.38629 1.38629
13983 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13984 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
13985 1.38629 1.38629 1.38629 1.38629
13986 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13987 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
13988 1.38629 1.38629 1.38629 1.38629
13989 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13990 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
13991 1.38629 1.38629 1.38629 1.38629
13992 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13993 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
13994 1.38629 1.38629 1.38629 1.38629
13995 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13996 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
13997 1.38629 1.38629 1.38629 1.38629
13998 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13999 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
14000 1.38629 1.38629 1.38629 1.38629
14001 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14002 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
14003 1.38629 1.38629 1.38629 1.38629
14004 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14005 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
14006 1.38629 1.38629 1.38629 1.38629
14007 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14008 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
14009 1.38629 1.38629 1.38629 1.38629
14010 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14011 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
14012 1.38629 1.38629 1.38629 1.38629
14013 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14014 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
14015 1.38629 1.38629 1.38629 1.38629
14016 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14017 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
14018 1.38629 1.38629 1.38629 1.38629
14019 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14020 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
14021 1.38629 1.38629 1.38629 1.38629
14022 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14023 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
14024 1.38629 1.38629 1.38629 1.38629
14025 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14026 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
14027 1.38629 1.38629 1.38629 1.38629
14028 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14029 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
14030 1.38629 1.38629 1.38629 1.38629
14031 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14032 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
14033 1.38629 1.38629 1.38629 1.38629
14034 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14035 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
14036 1.38629 1.38629 1.38629 1.38629
14037 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14038 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
14039 1.38629 1.38629 1.38629 1.38629
14040 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14041 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
14042 1.38629 1.38629 1.38629 1.38629
14043 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14044 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
14045 1.38629 1.38629 1.38629 1.38629
14046 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14047 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
14048 1.38629 1.38629 1.38629 1.38629
14049 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14050 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
14051 1.38629 1.38629 1.38629 1.38629
14052 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14053 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
14054 1.38629 1.38629 1.38629 1.38629
14055 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14056 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
14057 1.38629 1.38629 1.38629 1.38629
14058 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14059 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
14060 1.38629 1.38629 1.38629 1.38629
14061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14062 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
14063 1.38629 1.38629 1.38629 1.38629
14064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14065 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
14066 1.38629 1.38629 1.38629 1.38629
14067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14068 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
14069 1.38629 1.38629 1.38629 1.38629
14070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14071 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
14072 1.38629 1.38629 1.38629 1.38629
14073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14074 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
14075 1.38629 1.38629 1.38629 1.38629
14076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14077 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
14078 1.38629 1.38629 1.38629 1.38629
14079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14080 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
14081 1.38629 1.38629 1.38629 1.38629
14082 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
14083 //
14084 HMMER3/f [3.2.1 | June 2018]
14085 NAME long.59.aln
14086 LENG 70
14087 MAXL 160
14088 ALPH DNA
14089 RF no
14090 MM no
14091 CONS yes
14092 CS no
14093 MAP yes
14094 DATE Tue May 28 13:12:04 2019
14095 NSEQ 2
14096 EFFN 2.000000
14097 CKSUM 3210243743
14098 STATS LOCAL MSV -7.8918 0.72110
14099 STATS LOCAL VITERBI -9.2572 0.72110
14100 STATS LOCAL FORWARD -3.8308 0.72110
14101 HMM A C G T
14102 m->m m->i m->d i->m i->i d->m d->d
14103 COMPO 1.31529 1.39113 1.52918 1.32389
14104 1.38629 1.38629 1.38629 1.38629
14105 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
14106 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
14107 1.38629 1.38629 1.38629 1.38629
14108 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14109 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
14110 1.38629 1.38629 1.38629 1.38629
14111 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14112 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
14113 1.38629 1.38629 1.38629 1.38629
14114 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14115 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
14116 1.38629 1.38629 1.38629 1.38629
14117 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14118 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
14119 1.38629 1.38629 1.38629 1.38629
14120 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14121 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
14122 1.38629 1.38629 1.38629 1.38629
14123 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14124 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
14125 1.38629 1.38629 1.38629 1.38629
14126 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14127 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
14128 1.38629 1.38629 1.38629 1.38629
14129 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14130 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
14131 1.38629 1.38629 1.38629 1.38629
14132 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14133 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
14134 1.38629 1.38629 1.38629 1.38629
14135 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14136 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
14137 1.38629 1.38629 1.38629 1.38629
14138 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14139 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
14140 1.38629 1.38629 1.38629 1.38629
14141 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14142 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
14143 1.38629 1.38629 1.38629 1.38629
14144 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14145 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
14146 1.38629 1.38629 1.38629 1.38629
14147 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14148 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
14149 1.38629 1.38629 1.38629 1.38629
14150 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14151 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
14152 1.38629 1.38629 1.38629 1.38629
14153 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14154 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
14155 1.38629 1.38629 1.38629 1.38629
14156 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14157 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
14158 1.38629 1.38629 1.38629 1.38629
14159 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14160 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
14161 1.38629 1.38629 1.38629 1.38629
14162 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14163 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
14164 1.38629 1.38629 1.38629 1.38629
14165 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14166 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
14167 1.38629 1.38629 1.38629 1.38629
14168 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14169 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
14170 1.38629 1.38629 1.38629 1.38629
14171 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14172 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
14173 1.38629 1.38629 1.38629 1.38629
14174 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14175 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
14176 1.38629 1.38629 1.38629 1.38629
14177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14178 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
14179 1.38629 1.38629 1.38629 1.38629
14180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14181 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
14182 1.38629 1.38629 1.38629 1.38629
14183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14184 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
14185 1.38629 1.38629 1.38629 1.38629
14186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14187 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
14188 1.38629 1.38629 1.38629 1.38629
14189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14190 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
14191 1.38629 1.38629 1.38629 1.38629
14192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14193 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
14194 1.38629 1.38629 1.38629 1.38629
14195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14196 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
14197 1.38629 1.38629 1.38629 1.38629
14198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14199 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
14200 1.38629 1.38629 1.38629 1.38629
14201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14202 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
14203 1.38629 1.38629 1.38629 1.38629
14204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14205 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
14206 1.38629 1.38629 1.38629 1.38629
14207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14208 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
14209 1.38629 1.38629 1.38629 1.38629
14210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14211 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
14212 1.38629 1.38629 1.38629 1.38629
14213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14214 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
14215 1.38629 1.38629 1.38629 1.38629
14216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14217 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
14218 1.38629 1.38629 1.38629 1.38629
14219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14220 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
14221 1.38629 1.38629 1.38629 1.38629
14222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14223 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
14224 1.38629 1.38629 1.38629 1.38629
14225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14226 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
14227 1.38629 1.38629 1.38629 1.38629
14228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14229 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
14230 1.38629 1.38629 1.38629 1.38629
14231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14232 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
14233 1.38629 1.38629 1.38629 1.38629
14234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14235 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
14236 1.38629 1.38629 1.38629 1.38629
14237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14238 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
14239 1.38629 1.38629 1.38629 1.38629
14240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14241 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
14242 1.38629 1.38629 1.38629 1.38629
14243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14244 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
14245 1.38629 1.38629 1.38629 1.38629
14246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14247 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
14248 1.38629 1.38629 1.38629 1.38629
14249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14250 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
14251 1.38629 1.38629 1.38629 1.38629
14252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14253 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
14254 1.38629 1.38629 1.38629 1.38629
14255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14256 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
14257 1.38629 1.38629 1.38629 1.38629
14258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14259 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
14260 1.38629 1.38629 1.38629 1.38629
14261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14262 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
14263 1.38629 1.38629 1.38629 1.38629
14264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14265 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
14266 1.38629 1.38629 1.38629 1.38629
14267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14268 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
14269 1.38629 1.38629 1.38629 1.38629
14270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14271 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
14272 1.38629 1.38629 1.38629 1.38629
14273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14274 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
14275 1.38629 1.38629 1.38629 1.38629
14276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14277 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
14278 1.38629 1.38629 1.38629 1.38629
14279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14280 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
14281 1.38629 1.38629 1.38629 1.38629
14282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14283 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
14284 1.38629 1.38629 1.38629 1.38629
14285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14286 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
14287 1.38629 1.38629 1.38629 1.38629
14288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14289 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
14290 1.38629 1.38629 1.38629 1.38629
14291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14292 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
14293 1.38629 1.38629 1.38629 1.38629
14294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14295 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
14296 1.38629 1.38629 1.38629 1.38629
14297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14298 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
14299 1.38629 1.38629 1.38629 1.38629
14300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14301 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
14302 1.38629 1.38629 1.38629 1.38629
14303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14304 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
14305 1.38629 1.38629 1.38629 1.38629
14306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14307 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
14308 1.38629 1.38629 1.38629 1.38629
14309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14310 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
14311 1.38629 1.38629 1.38629 1.38629
14312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14313 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
14314 1.38629 1.38629 1.38629 1.38629
14315 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
14316 //
14317 HMMER3/f [3.2.1 | June 2018]
14318 NAME long.60.aln
14319 LENG 70
14320 MAXL 160
14321 ALPH DNA
14322 RF no
14323 MM no
14324 CONS yes
14325 CS no
14326 MAP yes
14327 DATE Tue May 28 13:12:04 2019
14328 NSEQ 2
14329 EFFN 2.000000
14330 CKSUM 1614228065
14331 STATS LOCAL MSV -8.0118 0.72018
14332 STATS LOCAL VITERBI -9.2620 0.72018
14333 STATS LOCAL FORWARD -3.4720 0.72018
14334 HMM A C G T
14335 m->m m->i m->d i->m i->i d->m d->d
14336 COMPO 1.11324 1.67408 1.37191 1.46793
14337 1.38629 1.38629 1.38629 1.38629
14338 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
14339 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
14340 1.38629 1.38629 1.38629 1.38629
14341 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14342 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
14343 1.38629 1.38629 1.38629 1.38629
14344 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14345 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
14346 1.38629 1.38629 1.38629 1.38629
14347 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14348 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
14349 1.38629 1.38629 1.38629 1.38629
14350 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14351 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
14352 1.38629 1.38629 1.38629 1.38629
14353 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14354 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
14355 1.38629 1.38629 1.38629 1.38629
14356 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14357 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
14358 1.38629 1.38629 1.38629 1.38629
14359 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14360 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
14361 1.38629 1.38629 1.38629 1.38629
14362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14363 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
14364 1.38629 1.38629 1.38629 1.38629
14365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14366 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
14367 1.38629 1.38629 1.38629 1.38629
14368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14369 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
14370 1.38629 1.38629 1.38629 1.38629
14371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14372 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
14373 1.38629 1.38629 1.38629 1.38629
14374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14375 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
14376 1.38629 1.38629 1.38629 1.38629
14377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14378 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
14379 1.38629 1.38629 1.38629 1.38629
14380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14381 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
14382 1.38629 1.38629 1.38629 1.38629
14383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14384 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
14385 1.38629 1.38629 1.38629 1.38629
14386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14387 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
14388 1.38629 1.38629 1.38629 1.38629
14389 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14390 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
14391 1.38629 1.38629 1.38629 1.38629
14392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14393 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
14394 1.38629 1.38629 1.38629 1.38629
14395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14396 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
14397 1.38629 1.38629 1.38629 1.38629
14398 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14399 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
14400 1.38629 1.38629 1.38629 1.38629
14401 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14402 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
14403 1.38629 1.38629 1.38629 1.38629
14404 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14405 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
14406 1.38629 1.38629 1.38629 1.38629
14407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14408 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
14409 1.38629 1.38629 1.38629 1.38629
14410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14411 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
14412 1.38629 1.38629 1.38629 1.38629
14413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14414 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
14415 1.38629 1.38629 1.38629 1.38629
14416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14417 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
14418 1.38629 1.38629 1.38629 1.38629
14419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14420 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
14421 1.38629 1.38629 1.38629 1.38629
14422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14423 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
14424 1.38629 1.38629 1.38629 1.38629
14425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14426 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
14427 1.38629 1.38629 1.38629 1.38629
14428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14429 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
14430 1.38629 1.38629 1.38629 1.38629
14431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14432 32 2.38910 2.82844 0.25233 2.62837 32 g - - -
14433 1.38629 1.38629 1.38629 1.38629
14434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14435 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
14436 1.38629 1.38629 1.38629 1.38629
14437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14438 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
14439 1.38629 1.38629 1.38629 1.38629
14440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14441 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
14442 1.38629 1.38629 1.38629 1.38629
14443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14444 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
14445 1.38629 1.38629 1.38629 1.38629
14446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14447 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
14448 1.38629 1.38629 1.38629 1.38629
14449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14450 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
14451 1.38629 1.38629 1.38629 1.38629
14452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14453 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
14454 1.38629 1.38629 1.38629 1.38629
14455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14456 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
14457 1.38629 1.38629 1.38629 1.38629
14458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14459 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
14460 1.38629 1.38629 1.38629 1.38629
14461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14462 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
14463 1.38629 1.38629 1.38629 1.38629
14464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14465 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
14466 1.38629 1.38629 1.38629 1.38629
14467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14468 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
14469 1.38629 1.38629 1.38629 1.38629
14470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14471 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
14472 1.38629 1.38629 1.38629 1.38629
14473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14474 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
14475 1.38629 1.38629 1.38629 1.38629
14476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14477 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
14478 1.38629 1.38629 1.38629 1.38629
14479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14480 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
14481 1.38629 1.38629 1.38629 1.38629
14482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14483 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
14484 1.38629 1.38629 1.38629 1.38629
14485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14486 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
14487 1.38629 1.38629 1.38629 1.38629
14488 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14489 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
14490 1.38629 1.38629 1.38629 1.38629
14491 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14492 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
14493 1.38629 1.38629 1.38629 1.38629
14494 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14495 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
14496 1.38629 1.38629 1.38629 1.38629
14497 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14498 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
14499 1.38629 1.38629 1.38629 1.38629
14500 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14501 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
14502 1.38629 1.38629 1.38629 1.38629
14503 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14504 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
14505 1.38629 1.38629 1.38629 1.38629
14506 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14507 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
14508 1.38629 1.38629 1.38629 1.38629
14509 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14510 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
14511 1.38629 1.38629 1.38629 1.38629
14512 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14513 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
14514 1.38629 1.38629 1.38629 1.38629
14515 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14516 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
14517 1.38629 1.38629 1.38629 1.38629
14518 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14519 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
14520 1.38629 1.38629 1.38629 1.38629
14521 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14522 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
14523 1.38629 1.38629 1.38629 1.38629
14524 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14525 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
14526 1.38629 1.38629 1.38629 1.38629
14527 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14528 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
14529 1.38629 1.38629 1.38629 1.38629
14530 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14531 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
14532 1.38629 1.38629 1.38629 1.38629
14533 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14534 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
14535 1.38629 1.38629 1.38629 1.38629
14536 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14537 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
14538 1.38629 1.38629 1.38629 1.38629
14539 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14540 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
14541 1.38629 1.38629 1.38629 1.38629
14542 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14543 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
14544 1.38629 1.38629 1.38629 1.38629
14545 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14546 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
14547 1.38629 1.38629 1.38629 1.38629
14548 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
14549 //
14550 HMMER3/f [3.2.1 | June 2018]
14551 NAME long.61.aln
14552 LENG 70
14553 MAXL 160
14554 ALPH DNA
14555 RF no
14556 MM no
14557 CONS yes
14558 CS no
14559 MAP yes
14560 DATE Tue May 28 13:12:04 2019
14561 NSEQ 2
14562 EFFN 2.000000
14563 CKSUM 2408145248
14564 STATS LOCAL MSV -7.8359 0.72000
14565 STATS LOCAL VITERBI -9.0846 0.72000
14566 STATS LOCAL FORWARD -3.5699 0.72000
14567 HMM A C G T
14568 m->m m->i m->d i->m i->i d->m d->d
14569 COMPO 1.19531 1.63705 1.27077 1.50408
14570 1.38629 1.38629 1.38629 1.38629
14571 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
14572 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
14573 1.38629 1.38629 1.38629 1.38629
14574 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14575 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
14576 1.38629 1.38629 1.38629 1.38629
14577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14578 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
14579 1.38629 1.38629 1.38629 1.38629
14580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14581 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
14582 1.38629 1.38629 1.38629 1.38629
14583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14584 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
14585 1.38629 1.38629 1.38629 1.38629
14586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14587 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
14588 1.38629 1.38629 1.38629 1.38629
14589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14590 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
14591 1.38629 1.38629 1.38629 1.38629
14592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14593 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
14594 1.38629 1.38629 1.38629 1.38629
14595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14596 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
14597 1.38629 1.38629 1.38629 1.38629
14598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14599 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
14600 1.38629 1.38629 1.38629 1.38629
14601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14602 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
14603 1.38629 1.38629 1.38629 1.38629
14604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14605 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
14606 1.38629 1.38629 1.38629 1.38629
14607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14608 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
14609 1.38629 1.38629 1.38629 1.38629
14610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14611 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
14612 1.38629 1.38629 1.38629 1.38629
14613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14614 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
14615 1.38629 1.38629 1.38629 1.38629
14616 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14617 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
14618 1.38629 1.38629 1.38629 1.38629
14619 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14620 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
14621 1.38629 1.38629 1.38629 1.38629
14622 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14623 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
14624 1.38629 1.38629 1.38629 1.38629
14625 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14626 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
14627 1.38629 1.38629 1.38629 1.38629
14628 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14629 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
14630 1.38629 1.38629 1.38629 1.38629
14631 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14632 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
14633 1.38629 1.38629 1.38629 1.38629
14634 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14635 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
14636 1.38629 1.38629 1.38629 1.38629
14637 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14638 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
14639 1.38629 1.38629 1.38629 1.38629
14640 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14641 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
14642 1.38629 1.38629 1.38629 1.38629
14643 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14644 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
14645 1.38629 1.38629 1.38629 1.38629
14646 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14647 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
14648 1.38629 1.38629 1.38629 1.38629
14649 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14650 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
14651 1.38629 1.38629 1.38629 1.38629
14652 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14653 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
14654 1.38629 1.38629 1.38629 1.38629
14655 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14656 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
14657 1.38629 1.38629 1.38629 1.38629
14658 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14659 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
14660 1.38629 1.38629 1.38629 1.38629
14661 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14662 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
14663 1.38629 1.38629 1.38629 1.38629
14664 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14665 32 2.38910 2.82844 0.25233 2.62837 32 g - - -
14666 1.38629 1.38629 1.38629 1.38629
14667 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14668 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
14669 1.38629 1.38629 1.38629 1.38629
14670 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14671 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
14672 1.38629 1.38629 1.38629 1.38629
14673 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14674 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
14675 1.38629 1.38629 1.38629 1.38629
14676 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14677 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
14678 1.38629 1.38629 1.38629 1.38629
14679 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14680 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
14681 1.38629 1.38629 1.38629 1.38629
14682 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14683 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
14684 1.38629 1.38629 1.38629 1.38629
14685 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14686 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
14687 1.38629 1.38629 1.38629 1.38629
14688 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14689 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
14690 1.38629 1.38629 1.38629 1.38629
14691 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14692 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
14693 1.38629 1.38629 1.38629 1.38629
14694 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14695 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
14696 1.38629 1.38629 1.38629 1.38629
14697 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14698 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
14699 1.38629 1.38629 1.38629 1.38629
14700 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14701 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
14702 1.38629 1.38629 1.38629 1.38629
14703 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14704 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
14705 1.38629 1.38629 1.38629 1.38629
14706 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14707 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
14708 1.38629 1.38629 1.38629 1.38629
14709 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14710 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
14711 1.38629 1.38629 1.38629 1.38629
14712 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14713 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
14714 1.38629 1.38629 1.38629 1.38629
14715 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14716 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
14717 1.38629 1.38629 1.38629 1.38629
14718 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14719 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
14720 1.38629 1.38629 1.38629 1.38629
14721 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14722 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
14723 1.38629 1.38629 1.38629 1.38629
14724 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14725 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
14726 1.38629 1.38629 1.38629 1.38629
14727 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14728 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
14729 1.38629 1.38629 1.38629 1.38629
14730 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14731 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
14732 1.38629 1.38629 1.38629 1.38629
14733 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14734 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
14735 1.38629 1.38629 1.38629 1.38629
14736 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14737 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
14738 1.38629 1.38629 1.38629 1.38629
14739 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14740 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
14741 1.38629 1.38629 1.38629 1.38629
14742 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14743 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
14744 1.38629 1.38629 1.38629 1.38629
14745 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14746 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
14747 1.38629 1.38629 1.38629 1.38629
14748 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14749 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
14750 1.38629 1.38629 1.38629 1.38629
14751 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14752 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
14753 1.38629 1.38629 1.38629 1.38629
14754 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14755 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
14756 1.38629 1.38629 1.38629 1.38629
14757 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14758 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
14759 1.38629 1.38629 1.38629 1.38629
14760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14761 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
14762 1.38629 1.38629 1.38629 1.38629
14763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14764 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
14765 1.38629 1.38629 1.38629 1.38629
14766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14767 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
14768 1.38629 1.38629 1.38629 1.38629
14769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14770 67 2.38910 2.82844 0.25233 2.62837 67 g - - -
14771 1.38629 1.38629 1.38629 1.38629
14772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14773 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
14774 1.38629 1.38629 1.38629 1.38629
14775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14776 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
14777 1.38629 1.38629 1.38629 1.38629
14778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14779 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
14780 1.38629 1.38629 1.38629 1.38629
14781 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
14782 //
14783 HMMER3/f [3.2.1 | June 2018]
14784 NAME long.62.aln
14785 LENG 70
14786 MAXL 160
14787 ALPH DNA
14788 RF no
14789 MM no
14790 CONS yes
14791 CS no
14792 MAP yes
14793 DATE Tue May 28 13:12:03 2019
14794 NSEQ 2
14795 EFFN 2.000000
14796 CKSUM 1574236373
14797 STATS LOCAL MSV -7.9394 0.72062
14798 STATS LOCAL VITERBI -9.3943 0.72062
14799 STATS LOCAL FORWARD -3.3008 0.72062
14800 HMM A C G T
14801 m->m m->i m->d i->m i->i d->m d->d
14802 COMPO 0.94586 1.62365 1.70321 1.45938
14803 1.38629 1.38629 1.38629 1.38629
14804 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
14805 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
14806 1.38629 1.38629 1.38629 1.38629
14807 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14808 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
14809 1.38629 1.38629 1.38629 1.38629
14810 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14811 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
14812 1.38629 1.38629 1.38629 1.38629
14813 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14814 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
14815 1.38629 1.38629 1.38629 1.38629
14816 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14817 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
14818 1.38629 1.38629 1.38629 1.38629
14819 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14820 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
14821 1.38629 1.38629 1.38629 1.38629
14822 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14823 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
14824 1.38629 1.38629 1.38629 1.38629
14825 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14826 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
14827 1.38629 1.38629 1.38629 1.38629
14828 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14829 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
14830 1.38629 1.38629 1.38629 1.38629
14831 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14832 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
14833 1.38629 1.38629 1.38629 1.38629
14834 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14835 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
14836 1.38629 1.38629 1.38629 1.38629
14837 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14838 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
14839 1.38629 1.38629 1.38629 1.38629
14840 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14841 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
14842 1.38629 1.38629 1.38629 1.38629
14843 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14844 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
14845 1.38629 1.38629 1.38629 1.38629
14846 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14847 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
14848 1.38629 1.38629 1.38629 1.38629
14849 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14850 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
14851 1.38629 1.38629 1.38629 1.38629
14852 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14853 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
14854 1.38629 1.38629 1.38629 1.38629
14855 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14856 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
14857 1.38629 1.38629 1.38629 1.38629
14858 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14859 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
14860 1.38629 1.38629 1.38629 1.38629
14861 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14862 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
14863 1.38629 1.38629 1.38629 1.38629
14864 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14865 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
14866 1.38629 1.38629 1.38629 1.38629
14867 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14868 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
14869 1.38629 1.38629 1.38629 1.38629
14870 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14871 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
14872 1.38629 1.38629 1.38629 1.38629
14873 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14874 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
14875 1.38629 1.38629 1.38629 1.38629
14876 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14877 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
14878 1.38629 1.38629 1.38629 1.38629
14879 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14880 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
14881 1.38629 1.38629 1.38629 1.38629
14882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14883 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
14884 1.38629 1.38629 1.38629 1.38629
14885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14886 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
14887 1.38629 1.38629 1.38629 1.38629
14888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14889 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
14890 1.38629 1.38629 1.38629 1.38629
14891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14892 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
14893 1.38629 1.38629 1.38629 1.38629
14894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14895 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
14896 1.38629 1.38629 1.38629 1.38629
14897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14898 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
14899 1.38629 1.38629 1.38629 1.38629
14900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14901 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
14902 1.38629 1.38629 1.38629 1.38629
14903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14904 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
14905 1.38629 1.38629 1.38629 1.38629
14906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14907 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
14908 1.38629 1.38629 1.38629 1.38629
14909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14910 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
14911 1.38629 1.38629 1.38629 1.38629
14912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14913 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
14914 1.38629 1.38629 1.38629 1.38629
14915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14916 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
14917 1.38629 1.38629 1.38629 1.38629
14918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14919 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
14920 1.38629 1.38629 1.38629 1.38629
14921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14922 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
14923 1.38629 1.38629 1.38629 1.38629
14924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14925 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
14926 1.38629 1.38629 1.38629 1.38629
14927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14928 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
14929 1.38629 1.38629 1.38629 1.38629
14930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14931 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
14932 1.38629 1.38629 1.38629 1.38629
14933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14934 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
14935 1.38629 1.38629 1.38629 1.38629
14936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14937 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
14938 1.38629 1.38629 1.38629 1.38629
14939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14940 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
14941 1.38629 1.38629 1.38629 1.38629
14942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14943 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
14944 1.38629 1.38629 1.38629 1.38629
14945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14946 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
14947 1.38629 1.38629 1.38629 1.38629
14948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14949 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
14950 1.38629 1.38629 1.38629 1.38629
14951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14952 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
14953 1.38629 1.38629 1.38629 1.38629
14954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14955 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
14956 1.38629 1.38629 1.38629 1.38629
14957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14958 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
14959 1.38629 1.38629 1.38629 1.38629
14960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14961 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
14962 1.38629 1.38629 1.38629 1.38629
14963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14964 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
14965 1.38629 1.38629 1.38629 1.38629
14966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14967 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
14968 1.38629 1.38629 1.38629 1.38629
14969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14970 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
14971 1.38629 1.38629 1.38629 1.38629
14972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14973 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
14974 1.38629 1.38629 1.38629 1.38629
14975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14976 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
14977 1.38629 1.38629 1.38629 1.38629
14978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14979 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
14980 1.38629 1.38629 1.38629 1.38629
14981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14982 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
14983 1.38629 1.38629 1.38629 1.38629
14984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14985 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
14986 1.38629 1.38629 1.38629 1.38629
14987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14988 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
14989 1.38629 1.38629 1.38629 1.38629
14990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14991 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
14992 1.38629 1.38629 1.38629 1.38629
14993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14994 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
14995 1.38629 1.38629 1.38629 1.38629
14996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14997 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
14998 1.38629 1.38629 1.38629 1.38629
14999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15000 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
15001 1.38629 1.38629 1.38629 1.38629
15002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15003 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
15004 1.38629 1.38629 1.38629 1.38629
15005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15006 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
15007 1.38629 1.38629 1.38629 1.38629
15008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15009 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
15010 1.38629 1.38629 1.38629 1.38629
15011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15012 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
15013 1.38629 1.38629 1.38629 1.38629
15014 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
15015 //
15016 HMMER3/f [3.2.1 | June 2018]
15017 NAME long.63.aln
15018 LENG 70
15019 MAXL 160
15020 ALPH DNA
15021 RF no
15022 MM no
15023 CONS yes
15024 CS no
15025 MAP yes
15026 DATE Tue May 28 13:12:04 2019
15027 NSEQ 2
15028 EFFN 2.000000
15029 CKSUM 1581685751
15030 STATS LOCAL MSV -8.3992 0.72064
15031 STATS LOCAL VITERBI -9.5309 0.72064
15032 STATS LOCAL FORWARD -3.5039 0.72064
15033 HMM A C G T
15034 m->m m->i m->d i->m i->i d->m d->d
15035 COMPO 1.06213 1.62061 1.56496 1.39671
15036 1.38629 1.38629 1.38629 1.38629
15037 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
15038 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
15039 1.38629 1.38629 1.38629 1.38629
15040 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15041 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
15042 1.38629 1.38629 1.38629 1.38629
15043 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15044 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
15045 1.38629 1.38629 1.38629 1.38629
15046 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15047 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
15048 1.38629 1.38629 1.38629 1.38629
15049 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15050 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
15051 1.38629 1.38629 1.38629 1.38629
15052 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15053 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
15054 1.38629 1.38629 1.38629 1.38629
15055 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15056 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
15057 1.38629 1.38629 1.38629 1.38629
15058 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15059 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
15060 1.38629 1.38629 1.38629 1.38629
15061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15062 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
15063 1.38629 1.38629 1.38629 1.38629
15064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15065 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
15066 1.38629 1.38629 1.38629 1.38629
15067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15068 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
15069 1.38629 1.38629 1.38629 1.38629
15070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15071 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
15072 1.38629 1.38629 1.38629 1.38629
15073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15074 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
15075 1.38629 1.38629 1.38629 1.38629
15076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15077 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
15078 1.38629 1.38629 1.38629 1.38629
15079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15080 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
15081 1.38629 1.38629 1.38629 1.38629
15082 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15083 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
15084 1.38629 1.38629 1.38629 1.38629
15085 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15086 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
15087 1.38629 1.38629 1.38629 1.38629
15088 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15089 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
15090 1.38629 1.38629 1.38629 1.38629
15091 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15092 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
15093 1.38629 1.38629 1.38629 1.38629
15094 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15095 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
15096 1.38629 1.38629 1.38629 1.38629
15097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15098 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
15099 1.38629 1.38629 1.38629 1.38629
15100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15101 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
15102 1.38629 1.38629 1.38629 1.38629
15103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15104 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
15105 1.38629 1.38629 1.38629 1.38629
15106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15107 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
15108 1.38629 1.38629 1.38629 1.38629
15109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15110 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
15111 1.38629 1.38629 1.38629 1.38629
15112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15113 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
15114 1.38629 1.38629 1.38629 1.38629
15115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15116 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
15117 1.38629 1.38629 1.38629 1.38629
15118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15119 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
15120 1.38629 1.38629 1.38629 1.38629
15121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15122 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
15123 1.38629 1.38629 1.38629 1.38629
15124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15125 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
15126 1.38629 1.38629 1.38629 1.38629
15127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15128 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
15129 1.38629 1.38629 1.38629 1.38629
15130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15131 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
15132 1.38629 1.38629 1.38629 1.38629
15133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15134 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
15135 1.38629 1.38629 1.38629 1.38629
15136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15137 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
15138 1.38629 1.38629 1.38629 1.38629
15139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15140 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
15141 1.38629 1.38629 1.38629 1.38629
15142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15143 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
15144 1.38629 1.38629 1.38629 1.38629
15145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15146 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
15147 1.38629 1.38629 1.38629 1.38629
15148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15149 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
15150 1.38629 1.38629 1.38629 1.38629
15151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15152 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
15153 1.38629 1.38629 1.38629 1.38629
15154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15155 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
15156 1.38629 1.38629 1.38629 1.38629
15157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15158 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
15159 1.38629 1.38629 1.38629 1.38629
15160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15161 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
15162 1.38629 1.38629 1.38629 1.38629
15163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15164 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
15165 1.38629 1.38629 1.38629 1.38629
15166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15167 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
15168 1.38629 1.38629 1.38629 1.38629
15169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15170 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
15171 1.38629 1.38629 1.38629 1.38629
15172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15173 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
15174 1.38629 1.38629 1.38629 1.38629
15175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15176 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
15177 1.38629 1.38629 1.38629 1.38629
15178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15179 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
15180 1.38629 1.38629 1.38629 1.38629
15181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15182 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
15183 1.38629 1.38629 1.38629 1.38629
15184 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15185 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
15186 1.38629 1.38629 1.38629 1.38629
15187 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15188 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
15189 1.38629 1.38629 1.38629 1.38629
15190 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15191 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
15192 1.38629 1.38629 1.38629 1.38629
15193 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15194 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
15195 1.38629 1.38629 1.38629 1.38629
15196 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15197 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
15198 1.38629 1.38629 1.38629 1.38629
15199 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15200 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
15201 1.38629 1.38629 1.38629 1.38629
15202 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15203 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
15204 1.38629 1.38629 1.38629 1.38629
15205 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15206 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
15207 1.38629 1.38629 1.38629 1.38629
15208 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15209 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
15210 1.38629 1.38629 1.38629 1.38629
15211 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15212 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
15213 1.38629 1.38629 1.38629 1.38629
15214 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15215 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
15216 1.38629 1.38629 1.38629 1.38629
15217 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15218 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
15219 1.38629 1.38629 1.38629 1.38629
15220 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15221 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
15222 1.38629 1.38629 1.38629 1.38629
15223 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15224 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
15225 1.38629 1.38629 1.38629 1.38629
15226 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15227 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
15228 1.38629 1.38629 1.38629 1.38629
15229 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15230 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
15231 1.38629 1.38629 1.38629 1.38629
15232 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15233 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
15234 1.38629 1.38629 1.38629 1.38629
15235 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15236 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
15237 1.38629 1.38629 1.38629 1.38629
15238 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15239 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
15240 1.38629 1.38629 1.38629 1.38629
15241 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15242 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
15243 1.38629 1.38629 1.38629 1.38629
15244 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15245 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
15246 1.38629 1.38629 1.38629 1.38629
15247 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
15248 //
15249 HMMER3/f [3.2.1 | June 2018]
15250 NAME long.64.aln
15251 LENG 80
15252 MAXL 174
15253 ALPH DNA
15254 RF no
15255 MM no
15256 CONS yes
15257 CS no
15258 MAP yes
15259 DATE Tue May 28 13:12:04 2019
15260 NSEQ 2
15261 EFFN 2.000000
15262 CKSUM 1595177567
15263 STATS LOCAL MSV -8.1741 0.72087
15264 STATS LOCAL VITERBI -9.7059 0.72087
15265 STATS LOCAL FORWARD -3.6637 0.72087
15266 HMM A C G T
15267 m->m m->i m->d i->m i->i d->m d->d
15268 COMPO 1.12278 1.57946 1.40266 1.50238
15269 1.38629 1.38629 1.38629 1.38629
15270 0.33647 3.73767 1.33977 1.46634 0.26236 0.00000 *
15271 1 1.98342 0.60779 2.04641 1.66785 1 c - - -
15272 1.38629 1.38629 1.38629 1.38629
15273 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
15274 2 1.97267 2.25870 0.46443 2.05625 2 g - - -
15275 1.38629 1.38629 1.38629 1.38629
15276 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
15277 3 0.56139 2.08489 1.86185 1.89791 3 a - - -
15278 1.38629 1.38629 1.38629 1.38629
15279 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
15280 4 1.97267 2.25870 0.46443 2.05625 4 g - - -
15281 1.38629 1.38629 1.38629 1.38629
15282 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
15283 5 1.98342 0.60779 2.04641 1.66785 5 c - - -
15284 1.38629 1.38629 1.38629 1.38629
15285 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
15286 6 0.56139 2.08489 1.86185 1.89791 6 a - - -
15287 1.38629 1.38629 1.38629 1.38629
15288 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
15289 7 0.56139 2.08489 1.86185 1.89791 7 a - - -
15290 1.38629 1.38629 1.38629 1.38629
15291 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
15292 8 1.97267 2.25870 0.46443 2.05625 8 g - - -
15293 1.38629 1.38629 1.38629 1.38629
15294 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
15295 9 1.98342 0.60779 2.04641 1.66785 9 c - - -
15296 1.38629 1.38629 1.38629 1.38629
15297 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
15298 10 1.91091 1.78233 1.95844 0.61114 10 t - - -
15299 1.38629 1.38629 1.38629 1.38629
15300 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
15301 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
15302 1.38629 1.38629 1.38629 1.38629
15303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15304 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
15305 1.38629 1.38629 1.38629 1.38629
15306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15307 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
15308 1.38629 1.38629 1.38629 1.38629
15309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15310 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
15311 1.38629 1.38629 1.38629 1.38629
15312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15313 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
15314 1.38629 1.38629 1.38629 1.38629
15315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15316 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
15317 1.38629 1.38629 1.38629 1.38629
15318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15319 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
15320 1.38629 1.38629 1.38629 1.38629
15321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15322 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
15323 1.38629 1.38629 1.38629 1.38629
15324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15325 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
15326 1.38629 1.38629 1.38629 1.38629
15327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15328 20 1.84050 1.95342 1.03654 1.06480 20 g - - -
15329 1.38629 1.38629 1.38629 1.38629
15330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15331 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
15332 1.38629 1.38629 1.38629 1.38629
15333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15334 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
15335 1.38629 1.38629 1.38629 1.38629
15336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15337 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
15338 1.38629 1.38629 1.38629 1.38629
15339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15340 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
15341 1.38629 1.38629 1.38629 1.38629
15342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15343 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
15344 1.38629 1.38629 1.38629 1.38629
15345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15346 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
15347 1.38629 1.38629 1.38629 1.38629
15348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15349 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
15350 1.38629 1.38629 1.38629 1.38629
15351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15352 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
15353 1.38629 1.38629 1.38629 1.38629
15354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15355 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
15356 1.38629 1.38629 1.38629 1.38629
15357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15358 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
15359 1.38629 1.38629 1.38629 1.38629
15360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15361 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
15362 1.38629 1.38629 1.38629 1.38629
15363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15364 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
15365 1.38629 1.38629 1.38629 1.38629
15366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15367 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
15368 1.38629 1.38629 1.38629 1.38629
15369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15370 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
15371 1.38629 1.38629 1.38629 1.38629
15372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15373 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
15374 1.38629 1.38629 1.38629 1.38629
15375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15376 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
15377 1.38629 1.38629 1.38629 1.38629
15378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15379 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
15380 1.38629 1.38629 1.38629 1.38629
15381 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15382 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
15383 1.38629 1.38629 1.38629 1.38629
15384 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15385 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
15386 1.38629 1.38629 1.38629 1.38629
15387 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15388 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
15389 1.38629 1.38629 1.38629 1.38629
15390 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15391 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
15392 1.38629 1.38629 1.38629 1.38629
15393 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15394 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
15395 1.38629 1.38629 1.38629 1.38629
15396 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15397 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
15398 1.38629 1.38629 1.38629 1.38629
15399 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15400 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
15401 1.38629 1.38629 1.38629 1.38629
15402 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15403 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
15404 1.38629 1.38629 1.38629 1.38629
15405 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15406 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
15407 1.38629 1.38629 1.38629 1.38629
15408 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15409 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
15410 1.38629 1.38629 1.38629 1.38629
15411 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15412 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
15413 1.38629 1.38629 1.38629 1.38629
15414 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15415 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
15416 1.38629 1.38629 1.38629 1.38629
15417 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15418 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
15419 1.38629 1.38629 1.38629 1.38629
15420 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15421 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
15422 1.38629 1.38629 1.38629 1.38629
15423 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15424 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
15425 1.38629 1.38629 1.38629 1.38629
15426 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15427 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
15428 1.38629 1.38629 1.38629 1.38629
15429 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15430 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
15431 1.38629 1.38629 1.38629 1.38629
15432 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15433 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
15434 1.38629 1.38629 1.38629 1.38629
15435 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15436 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
15437 1.38629 1.38629 1.38629 1.38629
15438 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15439 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
15440 1.38629 1.38629 1.38629 1.38629
15441 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15442 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
15443 1.38629 1.38629 1.38629 1.38629
15444 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15445 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
15446 1.38629 1.38629 1.38629 1.38629
15447 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15448 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
15449 1.38629 1.38629 1.38629 1.38629
15450 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15451 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
15452 1.38629 1.38629 1.38629 1.38629
15453 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15454 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
15455 1.38629 1.38629 1.38629 1.38629
15456 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15457 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
15458 1.38629 1.38629 1.38629 1.38629
15459 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15460 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
15461 1.38629 1.38629 1.38629 1.38629
15462 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15463 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
15464 1.38629 1.38629 1.38629 1.38629
15465 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15466 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
15467 1.38629 1.38629 1.38629 1.38629
15468 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15469 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
15470 1.38629 1.38629 1.38629 1.38629
15471 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15472 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
15473 1.38629 1.38629 1.38629 1.38629
15474 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15475 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
15476 1.38629 1.38629 1.38629 1.38629
15477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15478 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
15479 1.38629 1.38629 1.38629 1.38629
15480 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
15481 71 1.91091 1.78233 1.95844 0.61114 71 t - - -
15482 1.38629 1.38629 1.38629 1.38629
15483 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
15484 72 1.97267 2.25870 0.46443 2.05625 72 g - - -
15485 1.38629 1.38629 1.38629 1.38629
15486 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
15487 73 1.91091 1.78233 1.95844 0.61114 73 t - - -
15488 1.38629 1.38629 1.38629 1.38629
15489 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
15490 74 0.56139 2.08489 1.86185 1.89791 74 a - - -
15491 1.38629 1.38629 1.38629 1.38629
15492 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
15493 75 0.56139 2.08489 1.86185 1.89791 75 a - - -
15494 1.38629 1.38629 1.38629 1.38629
15495 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
15496 76 1.97267 2.25870 0.46443 2.05625 76 g - - -
15497 1.38629 1.38629 1.38629 1.38629
15498 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
15499 77 0.56139 2.08489 1.86185 1.89791 77 a - - -
15500 1.38629 1.38629 1.38629 1.38629
15501 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
15502 78 1.98342 0.60779 2.04641 1.66785 78 c - - -
15503 1.38629 1.38629 1.38629 1.38629
15504 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
15505 79 1.91091 1.78233 1.95844 0.61114 79 t - - -
15506 1.38629 1.38629 1.38629 1.38629
15507 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
15508 80 0.56139 2.08489 1.86185 1.89791 80 a - - -
15509 1.38629 1.38629 1.38629 1.38629
15510 0.03279 3.43399 * 1.46634 0.26236 0.00000 *
15511 //
15512 HMMER3/f [3.2.1 | June 2018]
15513 NAME long.65.aln
15514 LENG 70
15515 MAXL 160
15516 ALPH DNA
15517 RF no
15518 MM no
15519 CONS yes
15520 CS no
15521 MAP yes
15522 DATE Tue May 28 13:12:04 2019
15523 NSEQ 2
15524 EFFN 2.000000
15525 CKSUM 4203419393
15526 STATS LOCAL MSV -7.9742 0.71970
15527 STATS LOCAL VITERBI -9.3402 0.71970
15528 STATS LOCAL FORWARD -3.2406 0.71970
15529 HMM A C G T
15530 m->m m->i m->d i->m i->i d->m d->d
15531 COMPO 1.03960 1.73335 1.30313 1.61932
15532 1.38629 1.38629 1.38629 1.38629
15533 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
15534 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
15535 1.38629 1.38629 1.38629 1.38629
15536 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15537 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
15538 1.38629 1.38629 1.38629 1.38629
15539 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15540 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
15541 1.38629 1.38629 1.38629 1.38629
15542 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15543 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
15544 1.38629 1.38629 1.38629 1.38629
15545 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15546 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
15547 1.38629 1.38629 1.38629 1.38629
15548 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15549 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
15550 1.38629 1.38629 1.38629 1.38629
15551 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15552 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
15553 1.38629 1.38629 1.38629 1.38629
15554 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15555 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
15556 1.38629 1.38629 1.38629 1.38629
15557 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15558 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
15559 1.38629 1.38629 1.38629 1.38629
15560 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15561 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
15562 1.38629 1.38629 1.38629 1.38629
15563 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15564 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
15565 1.38629 1.38629 1.38629 1.38629
15566 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15567 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
15568 1.38629 1.38629 1.38629 1.38629
15569 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15570 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
15571 1.38629 1.38629 1.38629 1.38629
15572 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15573 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
15574 1.38629 1.38629 1.38629 1.38629
15575 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15576 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
15577 1.38629 1.38629 1.38629 1.38629
15578 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15579 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
15580 1.38629 1.38629 1.38629 1.38629
15581 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15582 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
15583 1.38629 1.38629 1.38629 1.38629
15584 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15585 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
15586 1.38629 1.38629 1.38629 1.38629
15587 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15588 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
15589 1.38629 1.38629 1.38629 1.38629
15590 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15591 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
15592 1.38629 1.38629 1.38629 1.38629
15593 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15594 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
15595 1.38629 1.38629 1.38629 1.38629
15596 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15597 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
15598 1.38629 1.38629 1.38629 1.38629
15599 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15600 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
15601 1.38629 1.38629 1.38629 1.38629
15602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15603 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
15604 1.38629 1.38629 1.38629 1.38629
15605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15606 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
15607 1.38629 1.38629 1.38629 1.38629
15608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15609 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
15610 1.38629 1.38629 1.38629 1.38629
15611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15612 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
15613 1.38629 1.38629 1.38629 1.38629
15614 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15615 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
15616 1.38629 1.38629 1.38629 1.38629
15617 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15618 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
15619 1.38629 1.38629 1.38629 1.38629
15620 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15621 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
15622 1.38629 1.38629 1.38629 1.38629
15623 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15624 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
15625 1.38629 1.38629 1.38629 1.38629
15626 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15627 32 2.38910 2.82844 0.25233 2.62837 32 g - - -
15628 1.38629 1.38629 1.38629 1.38629
15629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15630 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
15631 1.38629 1.38629 1.38629 1.38629
15632 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15633 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
15634 1.38629 1.38629 1.38629 1.38629
15635 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15636 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
15637 1.38629 1.38629 1.38629 1.38629
15638 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15639 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
15640 1.38629 1.38629 1.38629 1.38629
15641 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15642 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
15643 1.38629 1.38629 1.38629 1.38629
15644 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15645 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
15646 1.38629 1.38629 1.38629 1.38629
15647 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15648 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
15649 1.38629 1.38629 1.38629 1.38629
15650 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15651 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
15652 1.38629 1.38629 1.38629 1.38629
15653 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15654 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
15655 1.38629 1.38629 1.38629 1.38629
15656 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15657 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
15658 1.38629 1.38629 1.38629 1.38629
15659 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15660 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
15661 1.38629 1.38629 1.38629 1.38629
15662 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15663 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
15664 1.38629 1.38629 1.38629 1.38629
15665 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15666 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
15667 1.38629 1.38629 1.38629 1.38629
15668 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15669 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
15670 1.38629 1.38629 1.38629 1.38629
15671 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15672 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
15673 1.38629 1.38629 1.38629 1.38629
15674 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15675 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
15676 1.38629 1.38629 1.38629 1.38629
15677 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15678 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
15679 1.38629 1.38629 1.38629 1.38629
15680 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15681 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
15682 1.38629 1.38629 1.38629 1.38629
15683 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15684 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
15685 1.38629 1.38629 1.38629 1.38629
15686 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15687 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
15688 1.38629 1.38629 1.38629 1.38629
15689 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15690 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
15691 1.38629 1.38629 1.38629 1.38629
15692 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15693 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
15694 1.38629 1.38629 1.38629 1.38629
15695 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15696 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
15697 1.38629 1.38629 1.38629 1.38629
15698 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15699 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
15700 1.38629 1.38629 1.38629 1.38629
15701 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15702 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
15703 1.38629 1.38629 1.38629 1.38629
15704 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15705 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
15706 1.38629 1.38629 1.38629 1.38629
15707 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15708 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
15709 1.38629 1.38629 1.38629 1.38629
15710 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15711 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
15712 1.38629 1.38629 1.38629 1.38629
15713 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15714 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
15715 1.38629 1.38629 1.38629 1.38629
15716 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15717 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
15718 1.38629 1.38629 1.38629 1.38629
15719 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15720 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
15721 1.38629 1.38629 1.38629 1.38629
15722 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15723 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
15724 1.38629 1.38629 1.38629 1.38629
15725 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15726 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
15727 1.38629 1.38629 1.38629 1.38629
15728 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15729 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
15730 1.38629 1.38629 1.38629 1.38629
15731 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15732 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
15733 1.38629 1.38629 1.38629 1.38629
15734 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15735 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
15736 1.38629 1.38629 1.38629 1.38629
15737 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15738 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
15739 1.38629 1.38629 1.38629 1.38629
15740 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15741 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
15742 1.38629 1.38629 1.38629 1.38629
15743 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
15744 //
15745 HMMER3/f [3.2.1 | June 2018]
15746 NAME long.66.aln
15747 LENG 70
15748 MAXL 160
15749 ALPH DNA
15750 RF no
15751 MM no
15752 CONS yes
15753 CS no
15754 MAP yes
15755 DATE Tue May 28 13:12:04 2019
15756 NSEQ 2
15757 EFFN 2.000000
15758 CKSUM 212902700
15759 STATS LOCAL MSV -8.4235 0.72226
15760 STATS LOCAL VITERBI -9.3579 0.72226
15761 STATS LOCAL FORWARD -3.4937 0.72226
15762 HMM A C G T
15763 m->m m->i m->d i->m i->i d->m d->d
15764 COMPO 1.51844 1.49446 1.65628 1.00586
15765 1.38629 1.38629 1.38629 1.38629
15766 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
15767 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
15768 1.38629 1.38629 1.38629 1.38629
15769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15770 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
15771 1.38629 1.38629 1.38629 1.38629
15772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15773 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
15774 1.38629 1.38629 1.38629 1.38629
15775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15776 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
15777 1.38629 1.38629 1.38629 1.38629
15778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15779 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
15780 1.38629 1.38629 1.38629 1.38629
15781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15782 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
15783 1.38629 1.38629 1.38629 1.38629
15784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15785 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
15786 1.38629 1.38629 1.38629 1.38629
15787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15788 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
15789 1.38629 1.38629 1.38629 1.38629
15790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15791 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
15792 1.38629 1.38629 1.38629 1.38629
15793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15794 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
15795 1.38629 1.38629 1.38629 1.38629
15796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15797 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
15798 1.38629 1.38629 1.38629 1.38629
15799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15800 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
15801 1.38629 1.38629 1.38629 1.38629
15802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15803 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
15804 1.38629 1.38629 1.38629 1.38629
15805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15806 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
15807 1.38629 1.38629 1.38629 1.38629
15808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15809 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
15810 1.38629 1.38629 1.38629 1.38629
15811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15812 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
15813 1.38629 1.38629 1.38629 1.38629
15814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15815 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
15816 1.38629 1.38629 1.38629 1.38629
15817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15818 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
15819 1.38629 1.38629 1.38629 1.38629
15820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15821 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
15822 1.38629 1.38629 1.38629 1.38629
15823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15824 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
15825 1.38629 1.38629 1.38629 1.38629
15826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15827 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
15828 1.38629 1.38629 1.38629 1.38629
15829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15830 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
15831 1.38629 1.38629 1.38629 1.38629
15832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15833 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
15834 1.38629 1.38629 1.38629 1.38629
15835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15836 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
15837 1.38629 1.38629 1.38629 1.38629
15838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15839 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
15840 1.38629 1.38629 1.38629 1.38629
15841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15842 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
15843 1.38629 1.38629 1.38629 1.38629
15844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15845 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
15846 1.38629 1.38629 1.38629 1.38629
15847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15848 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
15849 1.38629 1.38629 1.38629 1.38629
15850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15851 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
15852 1.38629 1.38629 1.38629 1.38629
15853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15854 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
15855 1.38629 1.38629 1.38629 1.38629
15856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15857 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
15858 1.38629 1.38629 1.38629 1.38629
15859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15860 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
15861 1.38629 1.38629 1.38629 1.38629
15862 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15863 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
15864 1.38629 1.38629 1.38629 1.38629
15865 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15866 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
15867 1.38629 1.38629 1.38629 1.38629
15868 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15869 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
15870 1.38629 1.38629 1.38629 1.38629
15871 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15872 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
15873 1.38629 1.38629 1.38629 1.38629
15874 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15875 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
15876 1.38629 1.38629 1.38629 1.38629
15877 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15878 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
15879 1.38629 1.38629 1.38629 1.38629
15880 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15881 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
15882 1.38629 1.38629 1.38629 1.38629
15883 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15884 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
15885 1.38629 1.38629 1.38629 1.38629
15886 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15887 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
15888 1.38629 1.38629 1.38629 1.38629
15889 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15890 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
15891 1.38629 1.38629 1.38629 1.38629
15892 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15893 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
15894 1.38629 1.38629 1.38629 1.38629
15895 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15896 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
15897 1.38629 1.38629 1.38629 1.38629
15898 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15899 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
15900 1.38629 1.38629 1.38629 1.38629
15901 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15902 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
15903 1.38629 1.38629 1.38629 1.38629
15904 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15905 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
15906 1.38629 1.38629 1.38629 1.38629
15907 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15908 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
15909 1.38629 1.38629 1.38629 1.38629
15910 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15911 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
15912 1.38629 1.38629 1.38629 1.38629
15913 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15914 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
15915 1.38629 1.38629 1.38629 1.38629
15916 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15917 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
15918 1.38629 1.38629 1.38629 1.38629
15919 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15920 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
15921 1.38629 1.38629 1.38629 1.38629
15922 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15923 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
15924 1.38629 1.38629 1.38629 1.38629
15925 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15926 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
15927 1.38629 1.38629 1.38629 1.38629
15928 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15929 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
15930 1.38629 1.38629 1.38629 1.38629
15931 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15932 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
15933 1.38629 1.38629 1.38629 1.38629
15934 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15935 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
15936 1.38629 1.38629 1.38629 1.38629
15937 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15938 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
15939 1.38629 1.38629 1.38629 1.38629
15940 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15941 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
15942 1.38629 1.38629 1.38629 1.38629
15943 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15944 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
15945 1.38629 1.38629 1.38629 1.38629
15946 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15947 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
15948 1.38629 1.38629 1.38629 1.38629
15949 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15950 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
15951 1.38629 1.38629 1.38629 1.38629
15952 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15953 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
15954 1.38629 1.38629 1.38629 1.38629
15955 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15956 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
15957 1.38629 1.38629 1.38629 1.38629
15958 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15959 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
15960 1.38629 1.38629 1.38629 1.38629
15961 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15962 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
15963 1.38629 1.38629 1.38629 1.38629
15964 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15965 67 2.38910 2.82844 0.25233 2.62837 67 g - - -
15966 1.38629 1.38629 1.38629 1.38629
15967 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15968 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
15969 1.38629 1.38629 1.38629 1.38629
15970 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15971 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
15972 1.38629 1.38629 1.38629 1.38629
15973 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15974 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
15975 1.38629 1.38629 1.38629 1.38629
15976 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
15977 //
15978 HMMER3/f [3.2.1 | June 2018]
15979 NAME long.67.aln
15980 LENG 70
15981 MAXL 160
15982 ALPH DNA
15983 RF no
15984 MM no
15985 CONS yes
15986 CS no
15987 MAP yes
15988 DATE Tue May 28 13:12:04 2019
15989 NSEQ 2
15990 EFFN 2.000000
15991 CKSUM 1592920432
15992 STATS LOCAL MSV -8.0355 0.72053
15993 STATS LOCAL VITERBI -9.2753 0.72053
15994 STATS LOCAL FORWARD -3.5978 0.72053
15995 HMM A C G T
15996 m->m m->i m->d i->m i->i d->m d->d
15997 COMPO 1.34795 1.43634 1.34031 1.42433
15998 1.38629 1.38629 1.38629 1.38629
15999 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
16000 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
16001 1.38629 1.38629 1.38629 1.38629
16002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16003 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
16004 1.38629 1.38629 1.38629 1.38629
16005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16006 3 2.38910 2.82844 0.25233 2.62837 3 g - - -
16007 1.38629 1.38629 1.38629 1.38629
16008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16009 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
16010 1.38629 1.38629 1.38629 1.38629
16011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16012 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
16013 1.38629 1.38629 1.38629 1.38629
16014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16015 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
16016 1.38629 1.38629 1.38629 1.38629
16017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16018 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
16019 1.38629 1.38629 1.38629 1.38629
16020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16021 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
16022 1.38629 1.38629 1.38629 1.38629
16023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16024 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
16025 1.38629 1.38629 1.38629 1.38629
16026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16027 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
16028 1.38629 1.38629 1.38629 1.38629
16029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16030 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
16031 1.38629 1.38629 1.38629 1.38629
16032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16033 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
16034 1.38629 1.38629 1.38629 1.38629
16035 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16036 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
16037 1.38629 1.38629 1.38629 1.38629
16038 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16039 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
16040 1.38629 1.38629 1.38629 1.38629
16041 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16042 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
16043 1.38629 1.38629 1.38629 1.38629
16044 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16045 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
16046 1.38629 1.38629 1.38629 1.38629
16047 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16048 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
16049 1.38629 1.38629 1.38629 1.38629
16050 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16051 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
16052 1.38629 1.38629 1.38629 1.38629
16053 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16054 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
16055 1.38629 1.38629 1.38629 1.38629
16056 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16057 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
16058 1.38629 1.38629 1.38629 1.38629
16059 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16060 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
16061 1.38629 1.38629 1.38629 1.38629
16062 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16063 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
16064 1.38629 1.38629 1.38629 1.38629
16065 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16066 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
16067 1.38629 1.38629 1.38629 1.38629
16068 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16069 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
16070 1.38629 1.38629 1.38629 1.38629
16071 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16072 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
16073 1.38629 1.38629 1.38629 1.38629
16074 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16075 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
16076 1.38629 1.38629 1.38629 1.38629
16077 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16078 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
16079 1.38629 1.38629 1.38629 1.38629
16080 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16081 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
16082 1.38629 1.38629 1.38629 1.38629
16083 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16084 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
16085 1.38629 1.38629 1.38629 1.38629
16086 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16087 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
16088 1.38629 1.38629 1.38629 1.38629
16089 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16090 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
16091 1.38629 1.38629 1.38629 1.38629
16092 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16093 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
16094 1.38629 1.38629 1.38629 1.38629
16095 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16096 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
16097 1.38629 1.38629 1.38629 1.38629
16098 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16099 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
16100 1.38629 1.38629 1.38629 1.38629
16101 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16102 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
16103 1.38629 1.38629 1.38629 1.38629
16104 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16105 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
16106 1.38629 1.38629 1.38629 1.38629
16107 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16108 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
16109 1.38629 1.38629 1.38629 1.38629
16110 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16111 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
16112 1.38629 1.38629 1.38629 1.38629
16113 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16114 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
16115 1.38629 1.38629 1.38629 1.38629
16116 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16117 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
16118 1.38629 1.38629 1.38629 1.38629
16119 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16120 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
16121 1.38629 1.38629 1.38629 1.38629
16122 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16123 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
16124 1.38629 1.38629 1.38629 1.38629
16125 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16126 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
16127 1.38629 1.38629 1.38629 1.38629
16128 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16129 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
16130 1.38629 1.38629 1.38629 1.38629
16131 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16132 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
16133 1.38629 1.38629 1.38629 1.38629
16134 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16135 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
16136 1.38629 1.38629 1.38629 1.38629
16137 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16138 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
16139 1.38629 1.38629 1.38629 1.38629
16140 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16141 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
16142 1.38629 1.38629 1.38629 1.38629
16143 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16144 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
16145 1.38629 1.38629 1.38629 1.38629
16146 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16147 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
16148 1.38629 1.38629 1.38629 1.38629
16149 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16150 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
16151 1.38629 1.38629 1.38629 1.38629
16152 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16153 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
16154 1.38629 1.38629 1.38629 1.38629
16155 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16156 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
16157 1.38629 1.38629 1.38629 1.38629
16158 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16159 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
16160 1.38629 1.38629 1.38629 1.38629
16161 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16162 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
16163 1.38629 1.38629 1.38629 1.38629
16164 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16165 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
16166 1.38629 1.38629 1.38629 1.38629
16167 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16168 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
16169 1.38629 1.38629 1.38629 1.38629
16170 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16171 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
16172 1.38629 1.38629 1.38629 1.38629
16173 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16174 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
16175 1.38629 1.38629 1.38629 1.38629
16176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16177 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
16178 1.38629 1.38629 1.38629 1.38629
16179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16180 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
16181 1.38629 1.38629 1.38629 1.38629
16182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16183 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
16184 1.38629 1.38629 1.38629 1.38629
16185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16186 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
16187 1.38629 1.38629 1.38629 1.38629
16188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16189 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
16190 1.38629 1.38629 1.38629 1.38629
16191 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16192 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
16193 1.38629 1.38629 1.38629 1.38629
16194 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16195 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
16196 1.38629 1.38629 1.38629 1.38629
16197 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16198 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
16199 1.38629 1.38629 1.38629 1.38629
16200 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16201 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
16202 1.38629 1.38629 1.38629 1.38629
16203 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16204 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
16205 1.38629 1.38629 1.38629 1.38629
16206 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16207 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
16208 1.38629 1.38629 1.38629 1.38629
16209 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
16210 //
16211 HMMER3/f [3.2.1 | June 2018]
16212 NAME long.68.aln
16213 LENG 70
16214 MAXL 160
16215 ALPH DNA
16216 RF no
16217 MM no
16218 CONS yes
16219 CS no
16220 MAP yes
16221 DATE Tue May 28 13:12:04 2019
16222 NSEQ 2
16223 EFFN 2.000000
16224 CKSUM 197613389
16225 STATS LOCAL MSV -8.1343 0.72116
16226 STATS LOCAL VITERBI -9.1178 0.72116
16227 STATS LOCAL FORWARD -3.4711 0.72116
16228 HMM A C G T
16229 m->m m->i m->d i->m i->i d->m d->d
16230 COMPO 1.48462 1.41899 1.41252 1.24507
16231 1.38629 1.38629 1.38629 1.38629
16232 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
16233 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
16234 1.38629 1.38629 1.38629 1.38629
16235 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16236 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
16237 1.38629 1.38629 1.38629 1.38629
16238 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16239 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
16240 1.38629 1.38629 1.38629 1.38629
16241 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16242 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
16243 1.38629 1.38629 1.38629 1.38629
16244 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16245 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
16246 1.38629 1.38629 1.38629 1.38629
16247 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16248 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
16249 1.38629 1.38629 1.38629 1.38629
16250 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16251 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
16252 1.38629 1.38629 1.38629 1.38629
16253 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16254 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
16255 1.38629 1.38629 1.38629 1.38629
16256 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16257 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
16258 1.38629 1.38629 1.38629 1.38629
16259 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16260 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
16261 1.38629 1.38629 1.38629 1.38629
16262 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16263 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
16264 1.38629 1.38629 1.38629 1.38629
16265 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16266 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
16267 1.38629 1.38629 1.38629 1.38629
16268 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16269 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
16270 1.38629 1.38629 1.38629 1.38629
16271 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16272 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
16273 1.38629 1.38629 1.38629 1.38629
16274 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16275 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
16276 1.38629 1.38629 1.38629 1.38629
16277 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16278 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
16279 1.38629 1.38629 1.38629 1.38629
16280 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16281 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
16282 1.38629 1.38629 1.38629 1.38629
16283 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16284 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
16285 1.38629 1.38629 1.38629 1.38629
16286 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16287 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
16288 1.38629 1.38629 1.38629 1.38629
16289 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16290 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
16291 1.38629 1.38629 1.38629 1.38629
16292 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16293 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
16294 1.38629 1.38629 1.38629 1.38629
16295 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16296 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
16297 1.38629 1.38629 1.38629 1.38629
16298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16299 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
16300 1.38629 1.38629 1.38629 1.38629
16301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16302 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
16303 1.38629 1.38629 1.38629 1.38629
16304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16305 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
16306 1.38629 1.38629 1.38629 1.38629
16307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16308 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
16309 1.38629 1.38629 1.38629 1.38629
16310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16311 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
16312 1.38629 1.38629 1.38629 1.38629
16313 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16314 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
16315 1.38629 1.38629 1.38629 1.38629
16316 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16317 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
16318 1.38629 1.38629 1.38629 1.38629
16319 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16320 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
16321 1.38629 1.38629 1.38629 1.38629
16322 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16323 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
16324 1.38629 1.38629 1.38629 1.38629
16325 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16326 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
16327 1.38629 1.38629 1.38629 1.38629
16328 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16329 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
16330 1.38629 1.38629 1.38629 1.38629
16331 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16332 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
16333 1.38629 1.38629 1.38629 1.38629
16334 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16335 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
16336 1.38629 1.38629 1.38629 1.38629
16337 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16338 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
16339 1.38629 1.38629 1.38629 1.38629
16340 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16341 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
16342 1.38629 1.38629 1.38629 1.38629
16343 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16344 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
16345 1.38629 1.38629 1.38629 1.38629
16346 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16347 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
16348 1.38629 1.38629 1.38629 1.38629
16349 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16350 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
16351 1.38629 1.38629 1.38629 1.38629
16352 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16353 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
16354 1.38629 1.38629 1.38629 1.38629
16355 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16356 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
16357 1.38629 1.38629 1.38629 1.38629
16358 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16359 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
16360 1.38629 1.38629 1.38629 1.38629
16361 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16362 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
16363 1.38629 1.38629 1.38629 1.38629
16364 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16365 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
16366 1.38629 1.38629 1.38629 1.38629
16367 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16368 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
16369 1.38629 1.38629 1.38629 1.38629
16370 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16371 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
16372 1.38629 1.38629 1.38629 1.38629
16373 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16374 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
16375 1.38629 1.38629 1.38629 1.38629
16376 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16377 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
16378 1.38629 1.38629 1.38629 1.38629
16379 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16380 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
16381 1.38629 1.38629 1.38629 1.38629
16382 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16383 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
16384 1.38629 1.38629 1.38629 1.38629
16385 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16386 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
16387 1.38629 1.38629 1.38629 1.38629
16388 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16389 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
16390 1.38629 1.38629 1.38629 1.38629
16391 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16392 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
16393 1.38629 1.38629 1.38629 1.38629
16394 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16395 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
16396 1.38629 1.38629 1.38629 1.38629
16397 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16398 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
16399 1.38629 1.38629 1.38629 1.38629
16400 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16401 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
16402 1.38629 1.38629 1.38629 1.38629
16403 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16404 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
16405 1.38629 1.38629 1.38629 1.38629
16406 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16407 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
16408 1.38629 1.38629 1.38629 1.38629
16409 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16410 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
16411 1.38629 1.38629 1.38629 1.38629
16412 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16413 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
16414 1.38629 1.38629 1.38629 1.38629
16415 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16416 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
16417 1.38629 1.38629 1.38629 1.38629
16418 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16419 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
16420 1.38629 1.38629 1.38629 1.38629
16421 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16422 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
16423 1.38629 1.38629 1.38629 1.38629
16424 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16425 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
16426 1.38629 1.38629 1.38629 1.38629
16427 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16428 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
16429 1.38629 1.38629 1.38629 1.38629
16430 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16431 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
16432 1.38629 1.38629 1.38629 1.38629
16433 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16434 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
16435 1.38629 1.38629 1.38629 1.38629
16436 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16437 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
16438 1.38629 1.38629 1.38629 1.38629
16439 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16440 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
16441 1.38629 1.38629 1.38629 1.38629
16442 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
16443 //
16444 HMMER3/f [3.2.1 | June 2018]
16445 NAME long.69.aln
16446 LENG 95
16447 MAXL 195
16448 ALPH DNA
16449 RF no
16450 MM no
16451 CONS yes
16452 CS no
16453 MAP yes
16454 DATE Tue May 28 13:12:02 2019
16455 NSEQ 2
16456 EFFN 2.000000
16457 CKSUM 3693886677
16458 STATS LOCAL MSV -9.3349 0.73564
16459 STATS LOCAL VITERBI -11.4690 0.73564
16460 STATS LOCAL FORWARD -2.9050 0.73564
16461 HMM A C G T
16462 m->m m->i m->d i->m i->i d->m d->d
16463 COMPO 1.31992 1.50669 1.46715 1.27076
16464 1.38629 1.38629 1.38629 1.38629
16465 0.33647 3.73767 1.33977 1.46634 0.26236 0.00000 *
16466 1 1.97267 2.25870 0.46443 2.05625 1 g - - -
16467 1.38629 1.38629 1.38629 1.38629
16468 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16469 2 0.56139 2.08489 1.86185 1.89791 2 a - - -
16470 1.38629 1.38629 1.38629 1.38629
16471 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16472 3 0.56139 2.08489 1.86185 1.89791 3 a - - -
16473 1.38629 1.38629 1.38629 1.38629
16474 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16475 4 1.97267 2.25870 0.46443 2.05625 4 g - - -
16476 1.38629 1.38629 1.38629 1.38629
16477 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16478 5 1.98342 0.60779 2.04641 1.66785 5 c - - -
16479 1.38629 1.38629 1.38629 1.38629
16480 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16481 6 0.56139 2.08489 1.86185 1.89791 6 a - - -
16482 1.38629 1.38629 1.38629 1.38629
16483 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16484 7 1.97267 2.25870 0.46443 2.05625 7 g - - -
16485 1.38629 1.38629 1.38629 1.38629
16486 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16487 8 0.56139 2.08489 1.86185 1.89791 8 a - - -
16488 1.38629 1.38629 1.38629 1.38629
16489 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16490 9 1.97267 2.25870 0.46443 2.05625 9 g - - -
16491 1.38629 1.38629 1.38629 1.38629
16492 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16493 10 1.98342 0.60779 2.04641 1.66785 10 c - - -
16494 1.38629 1.38629 1.38629 1.38629
16495 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16496 11 1.91091 1.78233 1.95844 0.61114 11 t - - -
16497 1.38629 1.38629 1.38629 1.38629
16498 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16499 12 0.56139 2.08489 1.86185 1.89791 12 a - - -
16500 1.38629 1.38629 1.38629 1.38629
16501 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16502 13 1.97267 2.25870 0.46443 2.05625 13 g - - -
16503 1.38629 1.38629 1.38629 1.38629
16504 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16505 14 0.56139 2.08489 1.86185 1.89791 14 a - - -
16506 1.38629 1.38629 1.38629 1.38629
16507 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16508 15 0.56139 2.08489 1.86185 1.89791 15 a - - -
16509 1.38629 1.38629 1.38629 1.38629
16510 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16511 16 1.98342 0.60779 2.04641 1.66785 16 c - - -
16512 1.38629 1.38629 1.38629 1.38629
16513 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16514 17 1.91091 1.78233 1.95844 0.61114 17 t - - -
16515 1.38629 1.38629 1.38629 1.38629
16516 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16517 18 1.97267 2.25870 0.46443 2.05625 18 g - - -
16518 1.38629 1.38629 1.38629 1.38629
16519 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16520 19 1.97267 2.25870 0.46443 2.05625 19 g - - -
16521 1.38629 1.38629 1.38629 1.38629
16522 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16523 20 1.98342 0.60779 2.04641 1.66785 20 c - - -
16524 1.38629 1.38629 1.38629 1.38629
16525 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16526 21 0.56139 2.08489 1.86185 1.89791 21 a - - -
16527 1.38629 1.38629 1.38629 1.38629
16528 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16529 22 1.97267 2.25870 0.46443 2.05625 22 g - - -
16530 1.38629 1.38629 1.38629 1.38629
16531 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16532 23 0.56139 2.08489 1.86185 1.89791 23 a - - -
16533 1.38629 1.38629 1.38629 1.38629
16534 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16535 24 0.56139 2.08489 1.86185 1.89791 24 a - - -
16536 1.38629 1.38629 1.38629 1.38629
16537 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16538 25 0.56139 2.08489 1.86185 1.89791 25 a - - -
16539 1.38629 1.38629 1.38629 1.38629
16540 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
16541 26 1.09289 1.89038 1.88803 1.01509 26 t - - -
16542 1.38629 1.38629 1.38629 1.38629
16543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16544 27 2.01896 1.01168 2.12953 0.95527 27 t - - -
16545 1.38629 1.38629 1.38629 1.38629
16546 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16547 28 1.09289 1.89038 1.88803 1.01509 28 t - - -
16548 1.38629 1.38629 1.38629 1.38629
16549 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16550 29 1.84050 1.95342 1.03654 1.06480 29 g - - -
16551 1.38629 1.38629 1.38629 1.38629
16552 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16553 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
16554 1.38629 1.38629 1.38629 1.38629
16555 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16556 31 1.84050 1.95342 1.03654 1.06480 31 g - - -
16557 1.38629 1.38629 1.38629 1.38629
16558 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16559 32 1.12273 2.17004 0.88086 1.92408 32 g - - -
16560 1.38629 1.38629 1.38629 1.38629
16561 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16562 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
16563 1.38629 1.38629 1.38629 1.38629
16564 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16565 34 1.09289 1.89038 1.88803 1.01509 34 t - - -
16566 1.38629 1.38629 1.38629 1.38629
16567 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16568 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
16569 1.38629 1.38629 1.38629 1.38629
16570 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16571 36 2.01896 1.01168 2.12953 0.95527 36 t - - -
16572 1.38629 1.38629 1.38629 1.38629
16573 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16574 37 1.08498 1.08670 1.94700 1.70340 37 a - - -
16575 1.38629 1.38629 1.38629 1.38629
16576 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16577 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
16578 1.38629 1.38629 1.38629 1.38629
16579 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16580 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
16581 1.38629 1.38629 1.38629 1.38629
16582 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16583 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
16584 1.38629 1.38629 1.38629 1.38629
16585 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16586 41 1.09289 1.89038 1.88803 1.01509 41 t - - -
16587 1.38629 1.38629 1.38629 1.38629
16588 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16589 42 1.08498 1.08670 1.94700 1.70340 42 a - - -
16590 1.38629 1.38629 1.38629 1.38629
16591 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16592 43 2.01896 1.01168 2.12953 0.95527 43 t - - -
16593 1.38629 1.38629 1.38629 1.38629
16594 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16595 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
16596 1.38629 1.38629 1.38629 1.38629
16597 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16598 45 1.08498 1.08670 1.94700 1.70340 45 a - - -
16599 1.38629 1.38629 1.38629 1.38629
16600 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16601 46 2.01896 1.01168 2.12953 0.95527 46 t - - -
16602 1.38629 1.38629 1.38629 1.38629
16603 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16604 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
16605 1.38629 1.38629 1.38629 1.38629
16606 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16607 48 1.08498 1.08670 1.94700 1.70340 48 a - - -
16608 1.38629 1.38629 1.38629 1.38629
16609 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16610 49 1.12273 2.17004 0.88086 1.92408 49 g - - -
16611 1.38629 1.38629 1.38629 1.38629
16612 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16613 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
16614 1.38629 1.38629 1.38629 1.38629
16615 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16616 51 1.12273 2.17004 0.88086 1.92408 51 g - - -
16617 1.38629 1.38629 1.38629 1.38629
16618 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16619 52 2.01896 1.01168 2.12953 0.95527 52 t - - -
16620 1.38629 1.38629 1.38629 1.38629
16621 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16622 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
16623 1.38629 1.38629 1.38629 1.38629
16624 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16625 54 2.01896 1.01168 2.12953 0.95527 54 t - - -
16626 1.38629 1.38629 1.38629 1.38629
16627 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16628 55 1.84050 1.95342 1.03654 1.06480 55 g - - -
16629 1.38629 1.38629 1.38629 1.38629
16630 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16631 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
16632 1.38629 1.38629 1.38629 1.38629
16633 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16634 57 1.12273 2.17004 0.88086 1.92408 57 g - - -
16635 1.38629 1.38629 1.38629 1.38629
16636 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16637 58 1.84050 1.95342 1.03654 1.06480 58 g - - -
16638 1.38629 1.38629 1.38629 1.38629
16639 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16640 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
16641 1.38629 1.38629 1.38629 1.38629
16642 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16643 60 1.88401 1.14290 1.03416 1.75097 60 g - - -
16644 1.38629 1.38629 1.38629 1.38629
16645 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16646 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
16647 1.38629 1.38629 1.38629 1.38629
16648 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16649 62 1.09289 1.89038 1.88803 1.01509 62 t - - -
16650 1.38629 1.38629 1.38629 1.38629
16651 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16652 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
16653 1.38629 1.38629 1.38629 1.38629
16654 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16655 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
16656 1.38629 1.38629 1.38629 1.38629
16657 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16658 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
16659 1.38629 1.38629 1.38629 1.38629
16660 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16661 66 1.84050 1.95342 1.03654 1.06480 66 g - - -
16662 1.38629 1.38629 1.38629 1.38629
16663 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16664 67 1.12273 2.17004 0.88086 1.92408 67 g - - -
16665 1.38629 1.38629 1.38629 1.38629
16666 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16667 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
16668 1.38629 1.38629 1.38629 1.38629
16669 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16670 69 2.01896 1.01168 2.12953 0.95527 69 t - - -
16671 1.38629 1.38629 1.38629 1.38629
16672 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16673 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
16674 1.38629 1.38629 1.38629 1.38629
16675 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
16676 71 1.91091 1.78233 1.95844 0.61114 71 t - - -
16677 1.38629 1.38629 1.38629 1.38629
16678 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16679 72 1.98342 0.60779 2.04641 1.66785 72 c - - -
16680 1.38629 1.38629 1.38629 1.38629
16681 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16682 73 1.91091 1.78233 1.95844 0.61114 73 t - - -
16683 1.38629 1.38629 1.38629 1.38629
16684 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16685 74 1.98342 0.60779 2.04641 1.66785 74 c - - -
16686 1.38629 1.38629 1.38629 1.38629
16687 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16688 75 0.56139 2.08489 1.86185 1.89791 75 a - - -
16689 1.38629 1.38629 1.38629 1.38629
16690 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16691 76 1.91091 1.78233 1.95844 0.61114 76 t - - -
16692 1.38629 1.38629 1.38629 1.38629
16693 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16694 77 1.91091 1.78233 1.95844 0.61114 77 t - - -
16695 1.38629 1.38629 1.38629 1.38629
16696 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16697 78 1.91091 1.78233 1.95844 0.61114 78 t - - -
16698 1.38629 1.38629 1.38629 1.38629
16699 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16700 79 1.91091 1.78233 1.95844 0.61114 79 t - - -
16701 1.38629 1.38629 1.38629 1.38629
16702 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16703 80 1.91091 1.78233 1.95844 0.61114 80 t - - -
16704 1.38629 1.38629 1.38629 1.38629
16705 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16706 81 1.98342 0.60779 2.04641 1.66785 81 c - - -
16707 1.38629 1.38629 1.38629 1.38629
16708 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16709 82 1.91091 1.78233 1.95844 0.61114 82 t - - -
16710 1.38629 1.38629 1.38629 1.38629
16711 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16712 83 1.97267 2.25870 0.46443 2.05625 83 g - - -
16713 1.38629 1.38629 1.38629 1.38629
16714 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16715 84 1.98342 0.60779 2.04641 1.66785 84 c - - -
16716 1.38629 1.38629 1.38629 1.38629
16717 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16718 85 1.98342 0.60779 2.04641 1.66785 85 c - - -
16719 1.38629 1.38629 1.38629 1.38629
16720 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16721 86 1.98342 0.60779 2.04641 1.66785 86 c - - -
16722 1.38629 1.38629 1.38629 1.38629
16723 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16724 87 1.97267 2.25870 0.46443 2.05625 87 g - - -
16725 1.38629 1.38629 1.38629 1.38629
16726 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16727 88 1.91091 1.78233 1.95844 0.61114 88 t - - -
16728 1.38629 1.38629 1.38629 1.38629
16729 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16730 89 1.91091 1.78233 1.95844 0.61114 89 t - - -
16731 1.38629 1.38629 1.38629 1.38629
16732 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16733 90 1.98342 0.60779 2.04641 1.66785 90 c - - -
16734 1.38629 1.38629 1.38629 1.38629
16735 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16736 91 1.91091 1.78233 1.95844 0.61114 91 t - - -
16737 1.38629 1.38629 1.38629 1.38629
16738 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16739 92 0.56139 2.08489 1.86185 1.89791 92 a - - -
16740 1.38629 1.38629 1.38629 1.38629
16741 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16742 93 1.97267 2.25870 0.46443 2.05625 93 g - - -
16743 1.38629 1.38629 1.38629 1.38629
16744 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16745 94 1.98342 0.60779 2.04641 1.66785 94 c - - -
16746 1.38629 1.38629 1.38629 1.38629
16747 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
16748 95 1.91091 1.78233 1.95844 0.61114 95 t - - -
16749 1.38629 1.38629 1.38629 1.38629
16750 0.03279 3.43399 * 1.46634 0.26236 0.00000 *
16751 //
16752 HMMER3/f [3.2.1 | June 2018]
16753 NAME long.70.aln
16754 LENG 70
16755 MAXL 160
16756 ALPH DNA
16757 RF no
16758 MM no
16759 CONS yes
16760 CS no
16761 MAP yes
16762 DATE Tue May 28 13:12:02 2019
16763 NSEQ 2
16764 EFFN 2.000000
16765 CKSUM 2654244890
16766 STATS LOCAL MSV -8.3785 0.72268
16767 STATS LOCAL VITERBI -9.4571 0.72268
16768 STATS LOCAL FORWARD -3.4371 0.72268
16769 HMM A C G T
16770 m->m m->i m->d i->m i->i d->m d->d
16771 COMPO 1.52355 1.21479 1.93188 1.07759
16772 1.38629 1.38629 1.38629 1.38629
16773 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
16774 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
16775 1.38629 1.38629 1.38629 1.38629
16776 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16777 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
16778 1.38629 1.38629 1.38629 1.38629
16779 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16780 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
16781 1.38629 1.38629 1.38629 1.38629
16782 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16783 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
16784 1.38629 1.38629 1.38629 1.38629
16785 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16786 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
16787 1.38629 1.38629 1.38629 1.38629
16788 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16789 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
16790 1.38629 1.38629 1.38629 1.38629
16791 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16792 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
16793 1.38629 1.38629 1.38629 1.38629
16794 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16795 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
16796 1.38629 1.38629 1.38629 1.38629
16797 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16798 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
16799 1.38629 1.38629 1.38629 1.38629
16800 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16801 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
16802 1.38629 1.38629 1.38629 1.38629
16803 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16804 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
16805 1.38629 1.38629 1.38629 1.38629
16806 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16807 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
16808 1.38629 1.38629 1.38629 1.38629
16809 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16810 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
16811 1.38629 1.38629 1.38629 1.38629
16812 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16813 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
16814 1.38629 1.38629 1.38629 1.38629
16815 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16816 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
16817 1.38629 1.38629 1.38629 1.38629
16818 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16819 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
16820 1.38629 1.38629 1.38629 1.38629
16821 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16822 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
16823 1.38629 1.38629 1.38629 1.38629
16824 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16825 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
16826 1.38629 1.38629 1.38629 1.38629
16827 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16828 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
16829 1.38629 1.38629 1.38629 1.38629
16830 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16831 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
16832 1.38629 1.38629 1.38629 1.38629
16833 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16834 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
16835 1.38629 1.38629 1.38629 1.38629
16836 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16837 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
16838 1.38629 1.38629 1.38629 1.38629
16839 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16840 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
16841 1.38629 1.38629 1.38629 1.38629
16842 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16843 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
16844 1.38629 1.38629 1.38629 1.38629
16845 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16846 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
16847 1.38629 1.38629 1.38629 1.38629
16848 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16849 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
16850 1.38629 1.38629 1.38629 1.38629
16851 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16852 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
16853 1.38629 1.38629 1.38629 1.38629
16854 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16855 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
16856 1.38629 1.38629 1.38629 1.38629
16857 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16858 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
16859 1.38629 1.38629 1.38629 1.38629
16860 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16861 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
16862 1.38629 1.38629 1.38629 1.38629
16863 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16864 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
16865 1.38629 1.38629 1.38629 1.38629
16866 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16867 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
16868 1.38629 1.38629 1.38629 1.38629
16869 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16870 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
16871 1.38629 1.38629 1.38629 1.38629
16872 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16873 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
16874 1.38629 1.38629 1.38629 1.38629
16875 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16876 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
16877 1.38629 1.38629 1.38629 1.38629
16878 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16879 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
16880 1.38629 1.38629 1.38629 1.38629
16881 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16882 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
16883 1.38629 1.38629 1.38629 1.38629
16884 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16885 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
16886 1.38629 1.38629 1.38629 1.38629
16887 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16888 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
16889 1.38629 1.38629 1.38629 1.38629
16890 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16891 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
16892 1.38629 1.38629 1.38629 1.38629
16893 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16894 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
16895 1.38629 1.38629 1.38629 1.38629
16896 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16897 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
16898 1.38629 1.38629 1.38629 1.38629
16899 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16900 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
16901 1.38629 1.38629 1.38629 1.38629
16902 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16903 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
16904 1.38629 1.38629 1.38629 1.38629
16905 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16906 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
16907 1.38629 1.38629 1.38629 1.38629
16908 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16909 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
16910 1.38629 1.38629 1.38629 1.38629
16911 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16912 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
16913 1.38629 1.38629 1.38629 1.38629
16914 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16915 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
16916 1.38629 1.38629 1.38629 1.38629
16917 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16918 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
16919 1.38629 1.38629 1.38629 1.38629
16920 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16921 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
16922 1.38629 1.38629 1.38629 1.38629
16923 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16924 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
16925 1.38629 1.38629 1.38629 1.38629
16926 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16927 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
16928 1.38629 1.38629 1.38629 1.38629
16929 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16930 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
16931 1.38629 1.38629 1.38629 1.38629
16932 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16933 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
16934 1.38629 1.38629 1.38629 1.38629
16935 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16936 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
16937 1.38629 1.38629 1.38629 1.38629
16938 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16939 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
16940 1.38629 1.38629 1.38629 1.38629
16941 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16942 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
16943 1.38629 1.38629 1.38629 1.38629
16944 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16945 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
16946 1.38629 1.38629 1.38629 1.38629
16947 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16948 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
16949 1.38629 1.38629 1.38629 1.38629
16950 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16951 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
16952 1.38629 1.38629 1.38629 1.38629
16953 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16954 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
16955 1.38629 1.38629 1.38629 1.38629
16956 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16957 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
16958 1.38629 1.38629 1.38629 1.38629
16959 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16960 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
16961 1.38629 1.38629 1.38629 1.38629
16962 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16963 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
16964 1.38629 1.38629 1.38629 1.38629
16965 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16966 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
16967 1.38629 1.38629 1.38629 1.38629
16968 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16969 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
16970 1.38629 1.38629 1.38629 1.38629
16971 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16972 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
16973 1.38629 1.38629 1.38629 1.38629
16974 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16975 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
16976 1.38629 1.38629 1.38629 1.38629
16977 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16978 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
16979 1.38629 1.38629 1.38629 1.38629
16980 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16981 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
16982 1.38629 1.38629 1.38629 1.38629
16983 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
16984 //
16985 HMMER3/f [3.2.1 | June 2018]
16986 NAME long.71.aln
16987 LENG 70
16988 MAXL 160
16989 ALPH DNA
16990 RF no
16991 MM no
16992 CONS yes
16993 CS no
16994 MAP yes
16995 DATE Tue May 28 13:12:02 2019
16996 NSEQ 2
16997 EFFN 2.000000
16998 CKSUM 1009151711
16999 STATS LOCAL MSV -7.9784 0.71983
17000 STATS LOCAL VITERBI -9.2979 0.71983
17001 STATS LOCAL FORWARD -3.3519 0.71983
17002 HMM A C G T
17003 m->m m->i m->d i->m i->i d->m d->d
17004 COMPO 1.08868 1.68568 1.30434 1.57664
17005 1.38629 1.38629 1.38629 1.38629
17006 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
17007 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
17008 1.38629 1.38629 1.38629 1.38629
17009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17010 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
17011 1.38629 1.38629 1.38629 1.38629
17012 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17013 3 2.38910 2.82844 0.25233 2.62837 3 g - - -
17014 1.38629 1.38629 1.38629 1.38629
17015 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17016 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
17017 1.38629 1.38629 1.38629 1.38629
17018 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17019 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
17020 1.38629 1.38629 1.38629 1.38629
17021 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17022 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
17023 1.38629 1.38629 1.38629 1.38629
17024 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17025 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
17026 1.38629 1.38629 1.38629 1.38629
17027 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17028 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
17029 1.38629 1.38629 1.38629 1.38629
17030 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17031 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
17032 1.38629 1.38629 1.38629 1.38629
17033 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17034 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
17035 1.38629 1.38629 1.38629 1.38629
17036 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17037 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
17038 1.38629 1.38629 1.38629 1.38629
17039 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17040 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
17041 1.38629 1.38629 1.38629 1.38629
17042 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17043 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
17044 1.38629 1.38629 1.38629 1.38629
17045 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17046 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
17047 1.38629 1.38629 1.38629 1.38629
17048 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17049 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
17050 1.38629 1.38629 1.38629 1.38629
17051 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17052 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
17053 1.38629 1.38629 1.38629 1.38629
17054 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17055 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
17056 1.38629 1.38629 1.38629 1.38629
17057 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17058 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
17059 1.38629 1.38629 1.38629 1.38629
17060 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17061 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
17062 1.38629 1.38629 1.38629 1.38629
17063 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17064 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
17065 1.38629 1.38629 1.38629 1.38629
17066 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17067 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
17068 1.38629 1.38629 1.38629 1.38629
17069 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17070 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
17071 1.38629 1.38629 1.38629 1.38629
17072 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17073 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
17074 1.38629 1.38629 1.38629 1.38629
17075 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17076 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
17077 1.38629 1.38629 1.38629 1.38629
17078 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17079 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
17080 1.38629 1.38629 1.38629 1.38629
17081 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17082 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
17083 1.38629 1.38629 1.38629 1.38629
17084 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17085 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
17086 1.38629 1.38629 1.38629 1.38629
17087 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17088 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
17089 1.38629 1.38629 1.38629 1.38629
17090 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17091 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
17092 1.38629 1.38629 1.38629 1.38629
17093 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17094 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
17095 1.38629 1.38629 1.38629 1.38629
17096 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17097 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
17098 1.38629 1.38629 1.38629 1.38629
17099 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17100 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
17101 1.38629 1.38629 1.38629 1.38629
17102 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17103 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
17104 1.38629 1.38629 1.38629 1.38629
17105 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17106 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
17107 1.38629 1.38629 1.38629 1.38629
17108 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17109 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
17110 1.38629 1.38629 1.38629 1.38629
17111 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17112 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
17113 1.38629 1.38629 1.38629 1.38629
17114 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17115 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
17116 1.38629 1.38629 1.38629 1.38629
17117 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17118 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
17119 1.38629 1.38629 1.38629 1.38629
17120 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17121 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
17122 1.38629 1.38629 1.38629 1.38629
17123 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17124 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
17125 1.38629 1.38629 1.38629 1.38629
17126 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17127 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
17128 1.38629 1.38629 1.38629 1.38629
17129 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17130 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
17131 1.38629 1.38629 1.38629 1.38629
17132 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17133 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
17134 1.38629 1.38629 1.38629 1.38629
17135 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17136 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
17137 1.38629 1.38629 1.38629 1.38629
17138 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17139 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
17140 1.38629 1.38629 1.38629 1.38629
17141 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17142 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
17143 1.38629 1.38629 1.38629 1.38629
17144 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17145 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
17146 1.38629 1.38629 1.38629 1.38629
17147 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17148 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
17149 1.38629 1.38629 1.38629 1.38629
17150 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17151 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
17152 1.38629 1.38629 1.38629 1.38629
17153 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17154 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
17155 1.38629 1.38629 1.38629 1.38629
17156 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17157 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
17158 1.38629 1.38629 1.38629 1.38629
17159 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17160 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
17161 1.38629 1.38629 1.38629 1.38629
17162 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17163 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
17164 1.38629 1.38629 1.38629 1.38629
17165 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17166 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
17167 1.38629 1.38629 1.38629 1.38629
17168 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17169 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
17170 1.38629 1.38629 1.38629 1.38629
17171 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17172 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
17173 1.38629 1.38629 1.38629 1.38629
17174 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17175 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
17176 1.38629 1.38629 1.38629 1.38629
17177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17178 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
17179 1.38629 1.38629 1.38629 1.38629
17180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17181 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
17182 1.38629 1.38629 1.38629 1.38629
17183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17184 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
17185 1.38629 1.38629 1.38629 1.38629
17186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17187 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
17188 1.38629 1.38629 1.38629 1.38629
17189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17190 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
17191 1.38629 1.38629 1.38629 1.38629
17192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17193 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
17194 1.38629 1.38629 1.38629 1.38629
17195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17196 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
17197 1.38629 1.38629 1.38629 1.38629
17198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17199 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
17200 1.38629 1.38629 1.38629 1.38629
17201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17202 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
17203 1.38629 1.38629 1.38629 1.38629
17204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17205 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
17206 1.38629 1.38629 1.38629 1.38629
17207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17208 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
17209 1.38629 1.38629 1.38629 1.38629
17210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17211 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
17212 1.38629 1.38629 1.38629 1.38629
17213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17214 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
17215 1.38629 1.38629 1.38629 1.38629
17216 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
17217 //
17218 HMMER3/f [3.2.1 | June 2018]
17219 NAME long.72.aln
17220 LENG 70
17221 MAXL 160
17222 ALPH DNA
17223 RF no
17224 MM no
17225 CONS yes
17226 CS no
17227 MAP yes
17228 DATE Tue May 28 13:12:02 2019
17229 NSEQ 2
17230 EFFN 2.000000
17231 CKSUM 295818489
17232 STATS LOCAL MSV -8.1681 0.72138
17233 STATS LOCAL VITERBI -9.1523 0.72138
17234 STATS LOCAL FORWARD -3.6764 0.72138
17235 HMM A C G T
17236 m->m m->i m->d i->m i->i d->m d->d
17237 COMPO 1.48326 1.48268 1.44801 1.16784
17238 1.38629 1.38629 1.38629 1.38629
17239 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
17240 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
17241 1.38629 1.38629 1.38629 1.38629
17242 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17243 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
17244 1.38629 1.38629 1.38629 1.38629
17245 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17246 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
17247 1.38629 1.38629 1.38629 1.38629
17248 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17249 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
17250 1.38629 1.38629 1.38629 1.38629
17251 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17252 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
17253 1.38629 1.38629 1.38629 1.38629
17254 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17255 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
17256 1.38629 1.38629 1.38629 1.38629
17257 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17258 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
17259 1.38629 1.38629 1.38629 1.38629
17260 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17261 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
17262 1.38629 1.38629 1.38629 1.38629
17263 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17264 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
17265 1.38629 1.38629 1.38629 1.38629
17266 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17267 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
17268 1.38629 1.38629 1.38629 1.38629
17269 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17270 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
17271 1.38629 1.38629 1.38629 1.38629
17272 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17273 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
17274 1.38629 1.38629 1.38629 1.38629
17275 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17276 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
17277 1.38629 1.38629 1.38629 1.38629
17278 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17279 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
17280 1.38629 1.38629 1.38629 1.38629
17281 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17282 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
17283 1.38629 1.38629 1.38629 1.38629
17284 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17285 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
17286 1.38629 1.38629 1.38629 1.38629
17287 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17288 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
17289 1.38629 1.38629 1.38629 1.38629
17290 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17291 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
17292 1.38629 1.38629 1.38629 1.38629
17293 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17294 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
17295 1.38629 1.38629 1.38629 1.38629
17296 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17297 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
17298 1.38629 1.38629 1.38629 1.38629
17299 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17300 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
17301 1.38629 1.38629 1.38629 1.38629
17302 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17303 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
17304 1.38629 1.38629 1.38629 1.38629
17305 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17306 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
17307 1.38629 1.38629 1.38629 1.38629
17308 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17309 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
17310 1.38629 1.38629 1.38629 1.38629
17311 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17312 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
17313 1.38629 1.38629 1.38629 1.38629
17314 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17315 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
17316 1.38629 1.38629 1.38629 1.38629
17317 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17318 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
17319 1.38629 1.38629 1.38629 1.38629
17320 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17321 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
17322 1.38629 1.38629 1.38629 1.38629
17323 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17324 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
17325 1.38629 1.38629 1.38629 1.38629
17326 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17327 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
17328 1.38629 1.38629 1.38629 1.38629
17329 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17330 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
17331 1.38629 1.38629 1.38629 1.38629
17332 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17333 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
17334 1.38629 1.38629 1.38629 1.38629
17335 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17336 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
17337 1.38629 1.38629 1.38629 1.38629
17338 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17339 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
17340 1.38629 1.38629 1.38629 1.38629
17341 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17342 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
17343 1.38629 1.38629 1.38629 1.38629
17344 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17345 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
17346 1.38629 1.38629 1.38629 1.38629
17347 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17348 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
17349 1.38629 1.38629 1.38629 1.38629
17350 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17351 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
17352 1.38629 1.38629 1.38629 1.38629
17353 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17354 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
17355 1.38629 1.38629 1.38629 1.38629
17356 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17357 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
17358 1.38629 1.38629 1.38629 1.38629
17359 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17360 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
17361 1.38629 1.38629 1.38629 1.38629
17362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17363 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
17364 1.38629 1.38629 1.38629 1.38629
17365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17366 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
17367 1.38629 1.38629 1.38629 1.38629
17368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17369 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
17370 1.38629 1.38629 1.38629 1.38629
17371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17372 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
17373 1.38629 1.38629 1.38629 1.38629
17374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17375 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
17376 1.38629 1.38629 1.38629 1.38629
17377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17378 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
17379 1.38629 1.38629 1.38629 1.38629
17380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17381 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
17382 1.38629 1.38629 1.38629 1.38629
17383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17384 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
17385 1.38629 1.38629 1.38629 1.38629
17386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17387 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
17388 1.38629 1.38629 1.38629 1.38629
17389 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17390 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
17391 1.38629 1.38629 1.38629 1.38629
17392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17393 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
17394 1.38629 1.38629 1.38629 1.38629
17395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17396 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
17397 1.38629 1.38629 1.38629 1.38629
17398 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17399 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
17400 1.38629 1.38629 1.38629 1.38629
17401 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17402 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
17403 1.38629 1.38629 1.38629 1.38629
17404 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17405 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
17406 1.38629 1.38629 1.38629 1.38629
17407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17408 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
17409 1.38629 1.38629 1.38629 1.38629
17410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17411 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
17412 1.38629 1.38629 1.38629 1.38629
17413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17414 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
17415 1.38629 1.38629 1.38629 1.38629
17416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17417 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
17418 1.38629 1.38629 1.38629 1.38629
17419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17420 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
17421 1.38629 1.38629 1.38629 1.38629
17422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17423 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
17424 1.38629 1.38629 1.38629 1.38629
17425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17426 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
17427 1.38629 1.38629 1.38629 1.38629
17428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17429 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
17430 1.38629 1.38629 1.38629 1.38629
17431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17432 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
17433 1.38629 1.38629 1.38629 1.38629
17434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17435 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
17436 1.38629 1.38629 1.38629 1.38629
17437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17438 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
17439 1.38629 1.38629 1.38629 1.38629
17440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17441 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
17442 1.38629 1.38629 1.38629 1.38629
17443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17444 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
17445 1.38629 1.38629 1.38629 1.38629
17446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17447 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
17448 1.38629 1.38629 1.38629 1.38629
17449 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
17450 //
17451 HMMER3/f [3.2.1 | June 2018]
17452 NAME long.73.aln
17453 LENG 70
17454 MAXL 160
17455 ALPH DNA
17456 RF no
17457 MM no
17458 CONS yes
17459 CS no
17460 MAP yes
17461 DATE Tue May 28 13:12:02 2019
17462 NSEQ 2
17463 EFFN 2.000000
17464 CKSUM 1304963515
17465 STATS LOCAL MSV -7.9514 0.72069
17466 STATS LOCAL VITERBI -9.1535 0.72069
17467 STATS LOCAL FORWARD -3.8888 0.72069
17468 HMM A C G T
17469 m->m m->i m->d i->m i->i d->m d->d
17470 COMPO 1.44728 1.46664 1.30757 1.33327
17471 1.38629 1.38629 1.38629 1.38629
17472 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
17473 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
17474 1.38629 1.38629 1.38629 1.38629
17475 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17476 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
17477 1.38629 1.38629 1.38629 1.38629
17478 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17479 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
17480 1.38629 1.38629 1.38629 1.38629
17481 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17482 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
17483 1.38629 1.38629 1.38629 1.38629
17484 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17485 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
17486 1.38629 1.38629 1.38629 1.38629
17487 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17488 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
17489 1.38629 1.38629 1.38629 1.38629
17490 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17491 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
17492 1.38629 1.38629 1.38629 1.38629
17493 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17494 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
17495 1.38629 1.38629 1.38629 1.38629
17496 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17497 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
17498 1.38629 1.38629 1.38629 1.38629
17499 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17500 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
17501 1.38629 1.38629 1.38629 1.38629
17502 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17503 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
17504 1.38629 1.38629 1.38629 1.38629
17505 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17506 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
17507 1.38629 1.38629 1.38629 1.38629
17508 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17509 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
17510 1.38629 1.38629 1.38629 1.38629
17511 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17512 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
17513 1.38629 1.38629 1.38629 1.38629
17514 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17515 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
17516 1.38629 1.38629 1.38629 1.38629
17517 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17518 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
17519 1.38629 1.38629 1.38629 1.38629
17520 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17521 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
17522 1.38629 1.38629 1.38629 1.38629
17523 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17524 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
17525 1.38629 1.38629 1.38629 1.38629
17526 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17527 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
17528 1.38629 1.38629 1.38629 1.38629
17529 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17530 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
17531 1.38629 1.38629 1.38629 1.38629
17532 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17533 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
17534 1.38629 1.38629 1.38629 1.38629
17535 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17536 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
17537 1.38629 1.38629 1.38629 1.38629
17538 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17539 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
17540 1.38629 1.38629 1.38629 1.38629
17541 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17542 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
17543 1.38629 1.38629 1.38629 1.38629
17544 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17545 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
17546 1.38629 1.38629 1.38629 1.38629
17547 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17548 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
17549 1.38629 1.38629 1.38629 1.38629
17550 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17551 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
17552 1.38629 1.38629 1.38629 1.38629
17553 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17554 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
17555 1.38629 1.38629 1.38629 1.38629
17556 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17557 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
17558 1.38629 1.38629 1.38629 1.38629
17559 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17560 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
17561 1.38629 1.38629 1.38629 1.38629
17562 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17563 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
17564 1.38629 1.38629 1.38629 1.38629
17565 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17566 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
17567 1.38629 1.38629 1.38629 1.38629
17568 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17569 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
17570 1.38629 1.38629 1.38629 1.38629
17571 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17572 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
17573 1.38629 1.38629 1.38629 1.38629
17574 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17575 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
17576 1.38629 1.38629 1.38629 1.38629
17577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17578 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
17579 1.38629 1.38629 1.38629 1.38629
17580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17581 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
17582 1.38629 1.38629 1.38629 1.38629
17583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17584 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
17585 1.38629 1.38629 1.38629 1.38629
17586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17587 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
17588 1.38629 1.38629 1.38629 1.38629
17589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17590 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
17591 1.38629 1.38629 1.38629 1.38629
17592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17593 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
17594 1.38629 1.38629 1.38629 1.38629
17595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17596 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
17597 1.38629 1.38629 1.38629 1.38629
17598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17599 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
17600 1.38629 1.38629 1.38629 1.38629
17601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17602 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
17603 1.38629 1.38629 1.38629 1.38629
17604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17605 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
17606 1.38629 1.38629 1.38629 1.38629
17607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17608 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
17609 1.38629 1.38629 1.38629 1.38629
17610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17611 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
17612 1.38629 1.38629 1.38629 1.38629
17613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17614 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
17615 1.38629 1.38629 1.38629 1.38629
17616 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17617 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
17618 1.38629 1.38629 1.38629 1.38629
17619 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17620 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
17621 1.38629 1.38629 1.38629 1.38629
17622 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17623 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
17624 1.38629 1.38629 1.38629 1.38629
17625 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17626 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
17627 1.38629 1.38629 1.38629 1.38629
17628 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17629 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
17630 1.38629 1.38629 1.38629 1.38629
17631 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17632 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
17633 1.38629 1.38629 1.38629 1.38629
17634 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17635 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
17636 1.38629 1.38629 1.38629 1.38629
17637 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17638 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
17639 1.38629 1.38629 1.38629 1.38629
17640 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17641 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
17642 1.38629 1.38629 1.38629 1.38629
17643 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17644 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
17645 1.38629 1.38629 1.38629 1.38629
17646 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17647 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
17648 1.38629 1.38629 1.38629 1.38629
17649 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17650 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
17651 1.38629 1.38629 1.38629 1.38629
17652 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17653 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
17654 1.38629 1.38629 1.38629 1.38629
17655 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17656 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
17657 1.38629 1.38629 1.38629 1.38629
17658 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17659 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
17660 1.38629 1.38629 1.38629 1.38629
17661 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17662 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
17663 1.38629 1.38629 1.38629 1.38629
17664 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17665 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
17666 1.38629 1.38629 1.38629 1.38629
17667 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17668 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
17669 1.38629 1.38629 1.38629 1.38629
17670 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17671 67 2.38910 2.82844 0.25233 2.62837 67 g - - -
17672 1.38629 1.38629 1.38629 1.38629
17673 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17674 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
17675 1.38629 1.38629 1.38629 1.38629
17676 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17677 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
17678 1.38629 1.38629 1.38629 1.38629
17679 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17680 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
17681 1.38629 1.38629 1.38629 1.38629
17682 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
17683 //
17684 HMMER3/f [3.2.1 | June 2018]
17685 NAME long.74.aln
17686 LENG 70
17687 MAXL 160
17688 ALPH DNA
17689 RF no
17690 MM no
17691 CONS yes
17692 CS no
17693 MAP yes
17694 DATE Tue May 28 13:12:02 2019
17695 NSEQ 2
17696 EFFN 2.000000
17697 CKSUM 1193822911
17698 STATS LOCAL MSV -8.5061 0.72241
17699 STATS LOCAL VITERBI -9.4253 0.72241
17700 STATS LOCAL FORWARD -3.1771 0.72241
17701 HMM A C G T
17702 m->m m->i m->d i->m i->i d->m d->d
17703 COMPO 1.44165 1.53142 1.74981 0.98503
17704 1.38629 1.38629 1.38629 1.38629
17705 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
17706 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
17707 1.38629 1.38629 1.38629 1.38629
17708 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17709 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
17710 1.38629 1.38629 1.38629 1.38629
17711 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17712 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
17713 1.38629 1.38629 1.38629 1.38629
17714 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17715 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
17716 1.38629 1.38629 1.38629 1.38629
17717 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17718 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
17719 1.38629 1.38629 1.38629 1.38629
17720 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17721 6 2.46232 0.33808 2.58153 2.07174 6 c - - -
17722 1.38629 1.38629 1.38629 1.38629
17723 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17724 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
17725 1.38629 1.38629 1.38629 1.38629
17726 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17727 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
17728 1.38629 1.38629 1.38629 1.38629
17729 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17730 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
17731 1.38629 1.38629 1.38629 1.38629
17732 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17733 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
17734 1.38629 1.38629 1.38629 1.38629
17735 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17736 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
17737 1.38629 1.38629 1.38629 1.38629
17738 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17739 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
17740 1.38629 1.38629 1.38629 1.38629
17741 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17742 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
17743 1.38629 1.38629 1.38629 1.38629
17744 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17745 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
17746 1.38629 1.38629 1.38629 1.38629
17747 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17748 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
17749 1.38629 1.38629 1.38629 1.38629
17750 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17751 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
17752 1.38629 1.38629 1.38629 1.38629
17753 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17754 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
17755 1.38629 1.38629 1.38629 1.38629
17756 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17757 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
17758 1.38629 1.38629 1.38629 1.38629
17759 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17760 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
17761 1.38629 1.38629 1.38629 1.38629
17762 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17763 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
17764 1.38629 1.38629 1.38629 1.38629
17765 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17766 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
17767 1.38629 1.38629 1.38629 1.38629
17768 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17769 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
17770 1.38629 1.38629 1.38629 1.38629
17771 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17772 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
17773 1.38629 1.38629 1.38629 1.38629
17774 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17775 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
17776 1.38629 1.38629 1.38629 1.38629
17777 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17778 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
17779 1.38629 1.38629 1.38629 1.38629
17780 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17781 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
17782 1.38629 1.38629 1.38629 1.38629
17783 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17784 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
17785 1.38629 1.38629 1.38629 1.38629
17786 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17787 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
17788 1.38629 1.38629 1.38629 1.38629
17789 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17790 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
17791 1.38629 1.38629 1.38629 1.38629
17792 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17793 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
17794 1.38629 1.38629 1.38629 1.38629
17795 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17796 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
17797 1.38629 1.38629 1.38629 1.38629
17798 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17799 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
17800 1.38629 1.38629 1.38629 1.38629
17801 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17802 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
17803 1.38629 1.38629 1.38629 1.38629
17804 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17805 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
17806 1.38629 1.38629 1.38629 1.38629
17807 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17808 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
17809 1.38629 1.38629 1.38629 1.38629
17810 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17811 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
17812 1.38629 1.38629 1.38629 1.38629
17813 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17814 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
17815 1.38629 1.38629 1.38629 1.38629
17816 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17817 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
17818 1.38629 1.38629 1.38629 1.38629
17819 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17820 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
17821 1.38629 1.38629 1.38629 1.38629
17822 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17823 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
17824 1.38629 1.38629 1.38629 1.38629
17825 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17826 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
17827 1.38629 1.38629 1.38629 1.38629
17828 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17829 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
17830 1.38629 1.38629 1.38629 1.38629
17831 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17832 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
17833 1.38629 1.38629 1.38629 1.38629
17834 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17835 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
17836 1.38629 1.38629 1.38629 1.38629
17837 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17838 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
17839 1.38629 1.38629 1.38629 1.38629
17840 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17841 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
17842 1.38629 1.38629 1.38629 1.38629
17843 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17844 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
17845 1.38629 1.38629 1.38629 1.38629
17846 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17847 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
17848 1.38629 1.38629 1.38629 1.38629
17849 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17850 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
17851 1.38629 1.38629 1.38629 1.38629
17852 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17853 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
17854 1.38629 1.38629 1.38629 1.38629
17855 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17856 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
17857 1.38629 1.38629 1.38629 1.38629
17858 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17859 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
17860 1.38629 1.38629 1.38629 1.38629
17861 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17862 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
17863 1.38629 1.38629 1.38629 1.38629
17864 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17865 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
17866 1.38629 1.38629 1.38629 1.38629
17867 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17868 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
17869 1.38629 1.38629 1.38629 1.38629
17870 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17871 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
17872 1.38629 1.38629 1.38629 1.38629
17873 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17874 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
17875 1.38629 1.38629 1.38629 1.38629
17876 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17877 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
17878 1.38629 1.38629 1.38629 1.38629
17879 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17880 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
17881 1.38629 1.38629 1.38629 1.38629
17882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17883 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
17884 1.38629 1.38629 1.38629 1.38629
17885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17886 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
17887 1.38629 1.38629 1.38629 1.38629
17888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17889 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
17890 1.38629 1.38629 1.38629 1.38629
17891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17892 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
17893 1.38629 1.38629 1.38629 1.38629
17894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17895 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
17896 1.38629 1.38629 1.38629 1.38629
17897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17898 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
17899 1.38629 1.38629 1.38629 1.38629
17900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17901 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
17902 1.38629 1.38629 1.38629 1.38629
17903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17904 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
17905 1.38629 1.38629 1.38629 1.38629
17906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17907 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
17908 1.38629 1.38629 1.38629 1.38629
17909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17910 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
17911 1.38629 1.38629 1.38629 1.38629
17912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17913 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
17914 1.38629 1.38629 1.38629 1.38629
17915 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
17916 //
17917 HMMER3/f [3.2.1 | June 2018]
17918 NAME long.75.aln
17919 LENG 70
17920 MAXL 160
17921 ALPH DNA
17922 RF no
17923 MM no
17924 CONS yes
17925 CS no
17926 MAP yes
17927 DATE Tue May 28 13:12:02 2019
17928 NSEQ 2
17929 EFFN 2.000000
17930 CKSUM 3275121080
17931 STATS LOCAL MSV -8.4136 0.72163
17932 STATS LOCAL VITERBI -9.2547 0.72163
17933 STATS LOCAL FORWARD -3.4838 0.72163
17934 HMM A C G T
17935 m->m m->i m->d i->m i->i d->m d->d
17936 COMPO 1.40853 1.62732 1.52276 1.07607
17937 1.38629 1.38629 1.38629 1.38629
17938 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
17939 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
17940 1.38629 1.38629 1.38629 1.38629
17941 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17942 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
17943 1.38629 1.38629 1.38629 1.38629
17944 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17945 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
17946 1.38629 1.38629 1.38629 1.38629
17947 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17948 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
17949 1.38629 1.38629 1.38629 1.38629
17950 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17951 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
17952 1.38629 1.38629 1.38629 1.38629
17953 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17954 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
17955 1.38629 1.38629 1.38629 1.38629
17956 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17957 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
17958 1.38629 1.38629 1.38629 1.38629
17959 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17960 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
17961 1.38629 1.38629 1.38629 1.38629
17962 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17963 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
17964 1.38629 1.38629 1.38629 1.38629
17965 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17966 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
17967 1.38629 1.38629 1.38629 1.38629
17968 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17969 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
17970 1.38629 1.38629 1.38629 1.38629
17971 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17972 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
17973 1.38629 1.38629 1.38629 1.38629
17974 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17975 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
17976 1.38629 1.38629 1.38629 1.38629
17977 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17978 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
17979 1.38629 1.38629 1.38629 1.38629
17980 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17981 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
17982 1.38629 1.38629 1.38629 1.38629
17983 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17984 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
17985 1.38629 1.38629 1.38629 1.38629
17986 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17987 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
17988 1.38629 1.38629 1.38629 1.38629
17989 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17990 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
17991 1.38629 1.38629 1.38629 1.38629
17992 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17993 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
17994 1.38629 1.38629 1.38629 1.38629
17995 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17996 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
17997 1.38629 1.38629 1.38629 1.38629
17998 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17999 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
18000 1.38629 1.38629 1.38629 1.38629
18001 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18002 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
18003 1.38629 1.38629 1.38629 1.38629
18004 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18005 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
18006 1.38629 1.38629 1.38629 1.38629
18007 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18008 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
18009 1.38629 1.38629 1.38629 1.38629
18010 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18011 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
18012 1.38629 1.38629 1.38629 1.38629
18013 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18014 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
18015 1.38629 1.38629 1.38629 1.38629
18016 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18017 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
18018 1.38629 1.38629 1.38629 1.38629
18019 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18020 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
18021 1.38629 1.38629 1.38629 1.38629
18022 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18023 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
18024 1.38629 1.38629 1.38629 1.38629
18025 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18026 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
18027 1.38629 1.38629 1.38629 1.38629
18028 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18029 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
18030 1.38629 1.38629 1.38629 1.38629
18031 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18032 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
18033 1.38629 1.38629 1.38629 1.38629
18034 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18035 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
18036 1.38629 1.38629 1.38629 1.38629
18037 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18038 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
18039 1.38629 1.38629 1.38629 1.38629
18040 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18041 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
18042 1.38629 1.38629 1.38629 1.38629
18043 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18044 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
18045 1.38629 1.38629 1.38629 1.38629
18046 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18047 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
18048 1.38629 1.38629 1.38629 1.38629
18049 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18050 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
18051 1.38629 1.38629 1.38629 1.38629
18052 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18053 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
18054 1.38629 1.38629 1.38629 1.38629
18055 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18056 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
18057 1.38629 1.38629 1.38629 1.38629
18058 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18059 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
18060 1.38629 1.38629 1.38629 1.38629
18061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18062 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
18063 1.38629 1.38629 1.38629 1.38629
18064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18065 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
18066 1.38629 1.38629 1.38629 1.38629
18067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18068 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
18069 1.38629 1.38629 1.38629 1.38629
18070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18071 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
18072 1.38629 1.38629 1.38629 1.38629
18073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18074 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
18075 1.38629 1.38629 1.38629 1.38629
18076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18077 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
18078 1.38629 1.38629 1.38629 1.38629
18079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18080 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
18081 1.38629 1.38629 1.38629 1.38629
18082 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18083 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
18084 1.38629 1.38629 1.38629 1.38629
18085 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18086 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
18087 1.38629 1.38629 1.38629 1.38629
18088 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18089 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
18090 1.38629 1.38629 1.38629 1.38629
18091 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18092 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
18093 1.38629 1.38629 1.38629 1.38629
18094 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18095 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
18096 1.38629 1.38629 1.38629 1.38629
18097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18098 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
18099 1.38629 1.38629 1.38629 1.38629
18100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18101 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
18102 1.38629 1.38629 1.38629 1.38629
18103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18104 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
18105 1.38629 1.38629 1.38629 1.38629
18106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18107 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
18108 1.38629 1.38629 1.38629 1.38629
18109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18110 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
18111 1.38629 1.38629 1.38629 1.38629
18112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18113 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
18114 1.38629 1.38629 1.38629 1.38629
18115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18116 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
18117 1.38629 1.38629 1.38629 1.38629
18118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18119 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
18120 1.38629 1.38629 1.38629 1.38629
18121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18122 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
18123 1.38629 1.38629 1.38629 1.38629
18124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18125 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
18126 1.38629 1.38629 1.38629 1.38629
18127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18128 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
18129 1.38629 1.38629 1.38629 1.38629
18130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18131 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
18132 1.38629 1.38629 1.38629 1.38629
18133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18134 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
18135 1.38629 1.38629 1.38629 1.38629
18136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18137 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
18138 1.38629 1.38629 1.38629 1.38629
18139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18140 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
18141 1.38629 1.38629 1.38629 1.38629
18142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18143 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
18144 1.38629 1.38629 1.38629 1.38629
18145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18146 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
18147 1.38629 1.38629 1.38629 1.38629
18148 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
18149 //
18150 HMMER3/f [3.2.1 | June 2018]
18151 NAME long.76.aln
18152 LENG 70
18153 MAXL 160
18154 ALPH DNA
18155 RF no
18156 MM no
18157 CONS yes
18158 CS no
18159 MAP yes
18160 DATE Tue May 28 13:12:02 2019
18161 NSEQ 2
18162 EFFN 2.000000
18163 CKSUM 2027655957
18164 STATS LOCAL MSV -8.3586 0.72225
18165 STATS LOCAL VITERBI -9.4971 0.72225
18166 STATS LOCAL FORWARD -3.3563 0.72225
18167 HMM A C G T
18168 m->m m->i m->d i->m i->i d->m d->d
18169 COMPO 1.44704 1.27813 1.81427 1.12942
18170 1.38629 1.38629 1.38629 1.38629
18171 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
18172 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
18173 1.38629 1.38629 1.38629 1.38629
18174 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18175 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
18176 1.38629 1.38629 1.38629 1.38629
18177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18178 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
18179 1.38629 1.38629 1.38629 1.38629
18180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18181 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
18182 1.38629 1.38629 1.38629 1.38629
18183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18184 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
18185 1.38629 1.38629 1.38629 1.38629
18186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18187 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
18188 1.38629 1.38629 1.38629 1.38629
18189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18190 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
18191 1.38629 1.38629 1.38629 1.38629
18192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18193 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
18194 1.38629 1.38629 1.38629 1.38629
18195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18196 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
18197 1.38629 1.38629 1.38629 1.38629
18198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18199 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
18200 1.38629 1.38629 1.38629 1.38629
18201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18202 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
18203 1.38629 1.38629 1.38629 1.38629
18204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18205 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
18206 1.38629 1.38629 1.38629 1.38629
18207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18208 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
18209 1.38629 1.38629 1.38629 1.38629
18210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18211 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
18212 1.38629 1.38629 1.38629 1.38629
18213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18214 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
18215 1.38629 1.38629 1.38629 1.38629
18216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18217 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
18218 1.38629 1.38629 1.38629 1.38629
18219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18220 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
18221 1.38629 1.38629 1.38629 1.38629
18222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18223 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
18224 1.38629 1.38629 1.38629 1.38629
18225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18226 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
18227 1.38629 1.38629 1.38629 1.38629
18228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18229 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
18230 1.38629 1.38629 1.38629 1.38629
18231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18232 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
18233 1.38629 1.38629 1.38629 1.38629
18234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18235 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
18236 1.38629 1.38629 1.38629 1.38629
18237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18238 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
18239 1.38629 1.38629 1.38629 1.38629
18240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18241 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
18242 1.38629 1.38629 1.38629 1.38629
18243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18244 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
18245 1.38629 1.38629 1.38629 1.38629
18246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18247 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
18248 1.38629 1.38629 1.38629 1.38629
18249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18250 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
18251 1.38629 1.38629 1.38629 1.38629
18252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18253 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
18254 1.38629 1.38629 1.38629 1.38629
18255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18256 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
18257 1.38629 1.38629 1.38629 1.38629
18258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18259 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
18260 1.38629 1.38629 1.38629 1.38629
18261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18262 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
18263 1.38629 1.38629 1.38629 1.38629
18264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18265 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
18266 1.38629 1.38629 1.38629 1.38629
18267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18268 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
18269 1.38629 1.38629 1.38629 1.38629
18270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18271 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
18272 1.38629 1.38629 1.38629 1.38629
18273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18274 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
18275 1.38629 1.38629 1.38629 1.38629
18276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18277 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
18278 1.38629 1.38629 1.38629 1.38629
18279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18280 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
18281 1.38629 1.38629 1.38629 1.38629
18282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18283 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
18284 1.38629 1.38629 1.38629 1.38629
18285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18286 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
18287 1.38629 1.38629 1.38629 1.38629
18288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18289 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
18290 1.38629 1.38629 1.38629 1.38629
18291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18292 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
18293 1.38629 1.38629 1.38629 1.38629
18294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18295 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
18296 1.38629 1.38629 1.38629 1.38629
18297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18298 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
18299 1.38629 1.38629 1.38629 1.38629
18300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18301 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
18302 1.38629 1.38629 1.38629 1.38629
18303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18304 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
18305 1.38629 1.38629 1.38629 1.38629
18306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18307 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
18308 1.38629 1.38629 1.38629 1.38629
18309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18310 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
18311 1.38629 1.38629 1.38629 1.38629
18312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18313 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
18314 1.38629 1.38629 1.38629 1.38629
18315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18316 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
18317 1.38629 1.38629 1.38629 1.38629
18318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18319 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
18320 1.38629 1.38629 1.38629 1.38629
18321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18322 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
18323 1.38629 1.38629 1.38629 1.38629
18324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18325 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
18326 1.38629 1.38629 1.38629 1.38629
18327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18328 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
18329 1.38629 1.38629 1.38629 1.38629
18330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18331 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
18332 1.38629 1.38629 1.38629 1.38629
18333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18334 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
18335 1.38629 1.38629 1.38629 1.38629
18336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18337 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
18338 1.38629 1.38629 1.38629 1.38629
18339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18340 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
18341 1.38629 1.38629 1.38629 1.38629
18342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18343 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
18344 1.38629 1.38629 1.38629 1.38629
18345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18346 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
18347 1.38629 1.38629 1.38629 1.38629
18348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18349 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
18350 1.38629 1.38629 1.38629 1.38629
18351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18352 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
18353 1.38629 1.38629 1.38629 1.38629
18354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18355 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
18356 1.38629 1.38629 1.38629 1.38629
18357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18358 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
18359 1.38629 1.38629 1.38629 1.38629
18360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18361 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
18362 1.38629 1.38629 1.38629 1.38629
18363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18364 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
18365 1.38629 1.38629 1.38629 1.38629
18366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18367 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
18368 1.38629 1.38629 1.38629 1.38629
18369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18370 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
18371 1.38629 1.38629 1.38629 1.38629
18372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18373 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
18374 1.38629 1.38629 1.38629 1.38629
18375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18376 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
18377 1.38629 1.38629 1.38629 1.38629
18378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18379 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
18380 1.38629 1.38629 1.38629 1.38629
18381 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
18382 //
18383 HMMER3/f [3.2.1 | June 2018]
18384 NAME long.77.aln
18385 LENG 70
18386 MAXL 160
18387 ALPH DNA
18388 RF no
18389 MM no
18390 CONS yes
18391 CS no
18392 MAP yes
18393 DATE Tue May 28 13:12:02 2019
18394 NSEQ 2
18395 EFFN 2.000000
18396 CKSUM 976848233
18397 STATS LOCAL MSV -7.7061 0.71985
18398 STATS LOCAL VITERBI -9.2820 0.71985
18399 STATS LOCAL FORWARD -3.6293 0.71985
18400 HMM A C G T
18401 m->m m->i m->d i->m i->i d->m d->d
18402 COMPO 1.16788 1.56354 1.27373 1.61046
18403 1.38629 1.38629 1.38629 1.38629
18404 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
18405 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
18406 1.38629 1.38629 1.38629 1.38629
18407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18408 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
18409 1.38629 1.38629 1.38629 1.38629
18410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18411 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
18412 1.38629 1.38629 1.38629 1.38629
18413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18414 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
18415 1.38629 1.38629 1.38629 1.38629
18416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18417 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
18418 1.38629 1.38629 1.38629 1.38629
18419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18420 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
18421 1.38629 1.38629 1.38629 1.38629
18422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18423 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
18424 1.38629 1.38629 1.38629 1.38629
18425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18426 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
18427 1.38629 1.38629 1.38629 1.38629
18428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18429 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
18430 1.38629 1.38629 1.38629 1.38629
18431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18432 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
18433 1.38629 1.38629 1.38629 1.38629
18434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18435 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
18436 1.38629 1.38629 1.38629 1.38629
18437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18438 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
18439 1.38629 1.38629 1.38629 1.38629
18440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18441 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
18442 1.38629 1.38629 1.38629 1.38629
18443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18444 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
18445 1.38629 1.38629 1.38629 1.38629
18446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18447 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
18448 1.38629 1.38629 1.38629 1.38629
18449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18450 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
18451 1.38629 1.38629 1.38629 1.38629
18452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18453 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
18454 1.38629 1.38629 1.38629 1.38629
18455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18456 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
18457 1.38629 1.38629 1.38629 1.38629
18458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18459 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
18460 1.38629 1.38629 1.38629 1.38629
18461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18462 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
18463 1.38629 1.38629 1.38629 1.38629
18464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18465 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
18466 1.38629 1.38629 1.38629 1.38629
18467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18468 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
18469 1.38629 1.38629 1.38629 1.38629
18470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18471 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
18472 1.38629 1.38629 1.38629 1.38629
18473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18474 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
18475 1.38629 1.38629 1.38629 1.38629
18476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18477 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
18478 1.38629 1.38629 1.38629 1.38629
18479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18480 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
18481 1.38629 1.38629 1.38629 1.38629
18482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18483 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
18484 1.38629 1.38629 1.38629 1.38629
18485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18486 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
18487 1.38629 1.38629 1.38629 1.38629
18488 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18489 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
18490 1.38629 1.38629 1.38629 1.38629
18491 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18492 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
18493 1.38629 1.38629 1.38629 1.38629
18494 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18495 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
18496 1.38629 1.38629 1.38629 1.38629
18497 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18498 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
18499 1.38629 1.38629 1.38629 1.38629
18500 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18501 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
18502 1.38629 1.38629 1.38629 1.38629
18503 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18504 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
18505 1.38629 1.38629 1.38629 1.38629
18506 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18507 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
18508 1.38629 1.38629 1.38629 1.38629
18509 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18510 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
18511 1.38629 1.38629 1.38629 1.38629
18512 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18513 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
18514 1.38629 1.38629 1.38629 1.38629
18515 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18516 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
18517 1.38629 1.38629 1.38629 1.38629
18518 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18519 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
18520 1.38629 1.38629 1.38629 1.38629
18521 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18522 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
18523 1.38629 1.38629 1.38629 1.38629
18524 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18525 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
18526 1.38629 1.38629 1.38629 1.38629
18527 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18528 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
18529 1.38629 1.38629 1.38629 1.38629
18530 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18531 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
18532 1.38629 1.38629 1.38629 1.38629
18533 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18534 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
18535 1.38629 1.38629 1.38629 1.38629
18536 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18537 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
18538 1.38629 1.38629 1.38629 1.38629
18539 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18540 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
18541 1.38629 1.38629 1.38629 1.38629
18542 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18543 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
18544 1.38629 1.38629 1.38629 1.38629
18545 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18546 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
18547 1.38629 1.38629 1.38629 1.38629
18548 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18549 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
18550 1.38629 1.38629 1.38629 1.38629
18551 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18552 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
18553 1.38629 1.38629 1.38629 1.38629
18554 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18555 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
18556 1.38629 1.38629 1.38629 1.38629
18557 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18558 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
18559 1.38629 1.38629 1.38629 1.38629
18560 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18561 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
18562 1.38629 1.38629 1.38629 1.38629
18563 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18564 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
18565 1.38629 1.38629 1.38629 1.38629
18566 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18567 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
18568 1.38629 1.38629 1.38629 1.38629
18569 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18570 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
18571 1.38629 1.38629 1.38629 1.38629
18572 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18573 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
18574 1.38629 1.38629 1.38629 1.38629
18575 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18576 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
18577 1.38629 1.38629 1.38629 1.38629
18578 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18579 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
18580 1.38629 1.38629 1.38629 1.38629
18581 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18582 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
18583 1.38629 1.38629 1.38629 1.38629
18584 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18585 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
18586 1.38629 1.38629 1.38629 1.38629
18587 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18588 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
18589 1.38629 1.38629 1.38629 1.38629
18590 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18591 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
18592 1.38629 1.38629 1.38629 1.38629
18593 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18594 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
18595 1.38629 1.38629 1.38629 1.38629
18596 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18597 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
18598 1.38629 1.38629 1.38629 1.38629
18599 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18600 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
18601 1.38629 1.38629 1.38629 1.38629
18602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18603 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
18604 1.38629 1.38629 1.38629 1.38629
18605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18606 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
18607 1.38629 1.38629 1.38629 1.38629
18608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18609 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
18610 1.38629 1.38629 1.38629 1.38629
18611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18612 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
18613 1.38629 1.38629 1.38629 1.38629
18614 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
18615 //
18616 HMMER3/f [3.2.1 | June 2018]
18617 NAME long.78.aln
18618 LENG 70
18619 MAXL 160
18620 ALPH DNA
18621 RF no
18622 MM no
18623 CONS yes
18624 CS no
18625 MAP yes
18626 DATE Tue May 28 13:12:02 2019
18627 NSEQ 2
18628 EFFN 2.000000
18629 CKSUM 2522115511
18630 STATS LOCAL MSV -8.2929 0.72184
18631 STATS LOCAL VITERBI -9.4215 0.72184
18632 STATS LOCAL FORWARD -3.5618 0.72184
18633 HMM A C G T
18634 m->m m->i m->d i->m i->i d->m d->d
18635 COMPO 1.51931 1.54164 1.52480 1.05142
18636 1.38629 1.38629 1.38629 1.38629
18637 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
18638 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
18639 1.38629 1.38629 1.38629 1.38629
18640 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18641 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
18642 1.38629 1.38629 1.38629 1.38629
18643 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18644 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
18645 1.38629 1.38629 1.38629 1.38629
18646 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18647 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
18648 1.38629 1.38629 1.38629 1.38629
18649 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18650 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
18651 1.38629 1.38629 1.38629 1.38629
18652 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18653 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
18654 1.38629 1.38629 1.38629 1.38629
18655 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18656 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
18657 1.38629 1.38629 1.38629 1.38629
18658 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18659 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
18660 1.38629 1.38629 1.38629 1.38629
18661 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18662 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
18663 1.38629 1.38629 1.38629 1.38629
18664 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18665 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
18666 1.38629 1.38629 1.38629 1.38629
18667 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18668 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
18669 1.38629 1.38629 1.38629 1.38629
18670 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18671 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
18672 1.38629 1.38629 1.38629 1.38629
18673 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18674 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
18675 1.38629 1.38629 1.38629 1.38629
18676 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18677 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
18678 1.38629 1.38629 1.38629 1.38629
18679 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18680 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
18681 1.38629 1.38629 1.38629 1.38629
18682 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18683 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
18684 1.38629 1.38629 1.38629 1.38629
18685 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18686 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
18687 1.38629 1.38629 1.38629 1.38629
18688 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18689 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
18690 1.38629 1.38629 1.38629 1.38629
18691 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18692 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
18693 1.38629 1.38629 1.38629 1.38629
18694 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18695 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
18696 1.38629 1.38629 1.38629 1.38629
18697 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18698 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
18699 1.38629 1.38629 1.38629 1.38629
18700 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18701 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
18702 1.38629 1.38629 1.38629 1.38629
18703 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18704 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
18705 1.38629 1.38629 1.38629 1.38629
18706 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18707 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
18708 1.38629 1.38629 1.38629 1.38629
18709 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18710 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
18711 1.38629 1.38629 1.38629 1.38629
18712 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18713 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
18714 1.38629 1.38629 1.38629 1.38629
18715 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18716 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
18717 1.38629 1.38629 1.38629 1.38629
18718 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18719 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
18720 1.38629 1.38629 1.38629 1.38629
18721 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18722 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
18723 1.38629 1.38629 1.38629 1.38629
18724 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18725 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
18726 1.38629 1.38629 1.38629 1.38629
18727 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18728 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
18729 1.38629 1.38629 1.38629 1.38629
18730 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18731 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
18732 1.38629 1.38629 1.38629 1.38629
18733 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18734 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
18735 1.38629 1.38629 1.38629 1.38629
18736 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18737 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
18738 1.38629 1.38629 1.38629 1.38629
18739 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18740 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
18741 1.38629 1.38629 1.38629 1.38629
18742 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18743 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
18744 1.38629 1.38629 1.38629 1.38629
18745 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18746 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
18747 1.38629 1.38629 1.38629 1.38629
18748 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18749 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
18750 1.38629 1.38629 1.38629 1.38629
18751 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18752 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
18753 1.38629 1.38629 1.38629 1.38629
18754 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18755 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
18756 1.38629 1.38629 1.38629 1.38629
18757 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18758 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
18759 1.38629 1.38629 1.38629 1.38629
18760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18761 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
18762 1.38629 1.38629 1.38629 1.38629
18763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18764 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
18765 1.38629 1.38629 1.38629 1.38629
18766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18767 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
18768 1.38629 1.38629 1.38629 1.38629
18769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18770 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
18771 1.38629 1.38629 1.38629 1.38629
18772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18773 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
18774 1.38629 1.38629 1.38629 1.38629
18775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18776 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
18777 1.38629 1.38629 1.38629 1.38629
18778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18779 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
18780 1.38629 1.38629 1.38629 1.38629
18781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18782 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
18783 1.38629 1.38629 1.38629 1.38629
18784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18785 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
18786 1.38629 1.38629 1.38629 1.38629
18787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18788 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
18789 1.38629 1.38629 1.38629 1.38629
18790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18791 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
18792 1.38629 1.38629 1.38629 1.38629
18793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18794 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
18795 1.38629 1.38629 1.38629 1.38629
18796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18797 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
18798 1.38629 1.38629 1.38629 1.38629
18799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18800 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
18801 1.38629 1.38629 1.38629 1.38629
18802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18803 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
18804 1.38629 1.38629 1.38629 1.38629
18805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18806 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
18807 1.38629 1.38629 1.38629 1.38629
18808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18809 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
18810 1.38629 1.38629 1.38629 1.38629
18811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18812 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
18813 1.38629 1.38629 1.38629 1.38629
18814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18815 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
18816 1.38629 1.38629 1.38629 1.38629
18817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18818 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
18819 1.38629 1.38629 1.38629 1.38629
18820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18821 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
18822 1.38629 1.38629 1.38629 1.38629
18823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18824 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
18825 1.38629 1.38629 1.38629 1.38629
18826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18827 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
18828 1.38629 1.38629 1.38629 1.38629
18829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18830 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
18831 1.38629 1.38629 1.38629 1.38629
18832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18833 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
18834 1.38629 1.38629 1.38629 1.38629
18835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18836 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
18837 1.38629 1.38629 1.38629 1.38629
18838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18839 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
18840 1.38629 1.38629 1.38629 1.38629
18841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18842 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
18843 1.38629 1.38629 1.38629 1.38629
18844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18845 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
18846 1.38629 1.38629 1.38629 1.38629
18847 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
18848 //
18849 HMMER3/f [3.2.1 | June 2018]
18850 NAME long.79.aln
18851 LENG 70
18852 MAXL 160
18853 ALPH DNA
18854 RF no
18855 MM no
18856 CONS yes
18857 CS no
18858 MAP yes
18859 DATE Tue May 28 13:12:02 2019
18860 NSEQ 2
18861 EFFN 2.000000
18862 CKSUM 1636119314
18863 STATS LOCAL MSV -8.2610 0.72156
18864 STATS LOCAL VITERBI -9.3322 0.72156
18865 STATS LOCAL FORWARD -3.1566 0.72156
18866 HMM A C G T
18867 m->m m->i m->d i->m i->i d->m d->d
18868 COMPO 1.48265 1.38100 1.52807 1.18848
18869 1.38629 1.38629 1.38629 1.38629
18870 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
18871 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
18872 1.38629 1.38629 1.38629 1.38629
18873 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18874 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
18875 1.38629 1.38629 1.38629 1.38629
18876 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18877 3 2.38910 2.82844 0.25233 2.62837 3 g - - -
18878 1.38629 1.38629 1.38629 1.38629
18879 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18880 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
18881 1.38629 1.38629 1.38629 1.38629
18882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18883 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
18884 1.38629 1.38629 1.38629 1.38629
18885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18886 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
18887 1.38629 1.38629 1.38629 1.38629
18888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18889 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
18890 1.38629 1.38629 1.38629 1.38629
18891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18892 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
18893 1.38629 1.38629 1.38629 1.38629
18894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18895 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
18896 1.38629 1.38629 1.38629 1.38629
18897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18898 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
18899 1.38629 1.38629 1.38629 1.38629
18900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18901 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
18902 1.38629 1.38629 1.38629 1.38629
18903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18904 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
18905 1.38629 1.38629 1.38629 1.38629
18906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18907 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
18908 1.38629 1.38629 1.38629 1.38629
18909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18910 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
18911 1.38629 1.38629 1.38629 1.38629
18912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18913 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
18914 1.38629 1.38629 1.38629 1.38629
18915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18916 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
18917 1.38629 1.38629 1.38629 1.38629
18918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18919 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
18920 1.38629 1.38629 1.38629 1.38629
18921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18922 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
18923 1.38629 1.38629 1.38629 1.38629
18924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18925 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
18926 1.38629 1.38629 1.38629 1.38629
18927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18928 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
18929 1.38629 1.38629 1.38629 1.38629
18930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18931 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
18932 1.38629 1.38629 1.38629 1.38629
18933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18934 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
18935 1.38629 1.38629 1.38629 1.38629
18936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18937 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
18938 1.38629 1.38629 1.38629 1.38629
18939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18940 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
18941 1.38629 1.38629 1.38629 1.38629
18942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18943 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
18944 1.38629 1.38629 1.38629 1.38629
18945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18946 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
18947 1.38629 1.38629 1.38629 1.38629
18948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18949 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
18950 1.38629 1.38629 1.38629 1.38629
18951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18952 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
18953 1.38629 1.38629 1.38629 1.38629
18954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18955 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
18956 1.38629 1.38629 1.38629 1.38629
18957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18958 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
18959 1.38629 1.38629 1.38629 1.38629
18960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18961 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
18962 1.38629 1.38629 1.38629 1.38629
18963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18964 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
18965 1.38629 1.38629 1.38629 1.38629
18966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18967 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
18968 1.38629 1.38629 1.38629 1.38629
18969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18970 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
18971 1.38629 1.38629 1.38629 1.38629
18972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18973 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
18974 1.38629 1.38629 1.38629 1.38629
18975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18976 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
18977 1.38629 1.38629 1.38629 1.38629
18978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18979 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
18980 1.38629 1.38629 1.38629 1.38629
18981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18982 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
18983 1.38629 1.38629 1.38629 1.38629
18984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18985 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
18986 1.38629 1.38629 1.38629 1.38629
18987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18988 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
18989 1.38629 1.38629 1.38629 1.38629
18990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18991 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
18992 1.38629 1.38629 1.38629 1.38629
18993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18994 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
18995 1.38629 1.38629 1.38629 1.38629
18996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18997 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
18998 1.38629 1.38629 1.38629 1.38629
18999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19000 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
19001 1.38629 1.38629 1.38629 1.38629
19002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19003 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
19004 1.38629 1.38629 1.38629 1.38629
19005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19006 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
19007 1.38629 1.38629 1.38629 1.38629
19008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19009 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
19010 1.38629 1.38629 1.38629 1.38629
19011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19012 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
19013 1.38629 1.38629 1.38629 1.38629
19014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19015 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
19016 1.38629 1.38629 1.38629 1.38629
19017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19018 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
19019 1.38629 1.38629 1.38629 1.38629
19020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19021 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
19022 1.38629 1.38629 1.38629 1.38629
19023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19024 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
19025 1.38629 1.38629 1.38629 1.38629
19026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19027 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
19028 1.38629 1.38629 1.38629 1.38629
19029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19030 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
19031 1.38629 1.38629 1.38629 1.38629
19032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19033 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
19034 1.38629 1.38629 1.38629 1.38629
19035 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19036 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
19037 1.38629 1.38629 1.38629 1.38629
19038 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19039 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
19040 1.38629 1.38629 1.38629 1.38629
19041 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19042 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
19043 1.38629 1.38629 1.38629 1.38629
19044 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19045 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
19046 1.38629 1.38629 1.38629 1.38629
19047 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19048 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
19049 1.38629 1.38629 1.38629 1.38629
19050 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19051 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
19052 1.38629 1.38629 1.38629 1.38629
19053 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19054 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
19055 1.38629 1.38629 1.38629 1.38629
19056 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19057 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
19058 1.38629 1.38629 1.38629 1.38629
19059 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19060 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
19061 1.38629 1.38629 1.38629 1.38629
19062 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19063 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
19064 1.38629 1.38629 1.38629 1.38629
19065 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19066 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
19067 1.38629 1.38629 1.38629 1.38629
19068 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19069 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
19070 1.38629 1.38629 1.38629 1.38629
19071 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19072 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
19073 1.38629 1.38629 1.38629 1.38629
19074 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19075 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
19076 1.38629 1.38629 1.38629 1.38629
19077 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19078 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
19079 1.38629 1.38629 1.38629 1.38629
19080 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
19081 //
19082 HMMER3/f [3.2.1 | June 2018]
19083 NAME long.80.aln
19084 LENG 70
19085 MAXL 160
19086 ALPH DNA
19087 RF no
19088 MM no
19089 CONS yes
19090 CS no
19091 MAP yes
19092 DATE Tue May 28 13:12:02 2019
19093 NSEQ 2
19094 EFFN 2.000000
19095 CKSUM 1911820345
19096 STATS LOCAL MSV -7.7647 0.72086
19097 STATS LOCAL VITERBI -8.9877 0.72086
19098 STATS LOCAL FORWARD -3.6995 0.72086
19099 HMM A C G T
19100 m->m m->i m->d i->m i->i d->m d->d
19101 COMPO 1.45138 1.36359 1.37796 1.35511
19102 1.38629 1.38629 1.38629 1.38629
19103 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
19104 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
19105 1.38629 1.38629 1.38629 1.38629
19106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19107 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
19108 1.38629 1.38629 1.38629 1.38629
19109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19110 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
19111 1.38629 1.38629 1.38629 1.38629
19112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19113 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
19114 1.38629 1.38629 1.38629 1.38629
19115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19116 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
19117 1.38629 1.38629 1.38629 1.38629
19118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19119 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
19120 1.38629 1.38629 1.38629 1.38629
19121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19122 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
19123 1.38629 1.38629 1.38629 1.38629
19124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19125 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
19126 1.38629 1.38629 1.38629 1.38629
19127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19128 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
19129 1.38629 1.38629 1.38629 1.38629
19130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19131 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
19132 1.38629 1.38629 1.38629 1.38629
19133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19134 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
19135 1.38629 1.38629 1.38629 1.38629
19136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19137 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
19138 1.38629 1.38629 1.38629 1.38629
19139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19140 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
19141 1.38629 1.38629 1.38629 1.38629
19142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19143 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
19144 1.38629 1.38629 1.38629 1.38629
19145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19146 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
19147 1.38629 1.38629 1.38629 1.38629
19148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19149 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
19150 1.38629 1.38629 1.38629 1.38629
19151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19152 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
19153 1.38629 1.38629 1.38629 1.38629
19154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19155 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
19156 1.38629 1.38629 1.38629 1.38629
19157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19158 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
19159 1.38629 1.38629 1.38629 1.38629
19160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19161 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
19162 1.38629 1.38629 1.38629 1.38629
19163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19164 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
19165 1.38629 1.38629 1.38629 1.38629
19166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19167 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
19168 1.38629 1.38629 1.38629 1.38629
19169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19170 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
19171 1.38629 1.38629 1.38629 1.38629
19172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19173 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
19174 1.38629 1.38629 1.38629 1.38629
19175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19176 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
19177 1.38629 1.38629 1.38629 1.38629
19178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19179 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
19180 1.38629 1.38629 1.38629 1.38629
19181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19182 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
19183 1.38629 1.38629 1.38629 1.38629
19184 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19185 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
19186 1.38629 1.38629 1.38629 1.38629
19187 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19188 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
19189 1.38629 1.38629 1.38629 1.38629
19190 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19191 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
19192 1.38629 1.38629 1.38629 1.38629
19193 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19194 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
19195 1.38629 1.38629 1.38629 1.38629
19196 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19197 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
19198 1.38629 1.38629 1.38629 1.38629
19199 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19200 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
19201 1.38629 1.38629 1.38629 1.38629
19202 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19203 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
19204 1.38629 1.38629 1.38629 1.38629
19205 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19206 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
19207 1.38629 1.38629 1.38629 1.38629
19208 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19209 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
19210 1.38629 1.38629 1.38629 1.38629
19211 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19212 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
19213 1.38629 1.38629 1.38629 1.38629
19214 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19215 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
19216 1.38629 1.38629 1.38629 1.38629
19217 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19218 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
19219 1.38629 1.38629 1.38629 1.38629
19220 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19221 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
19222 1.38629 1.38629 1.38629 1.38629
19223 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19224 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
19225 1.38629 1.38629 1.38629 1.38629
19226 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19227 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
19228 1.38629 1.38629 1.38629 1.38629
19229 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19230 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
19231 1.38629 1.38629 1.38629 1.38629
19232 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19233 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
19234 1.38629 1.38629 1.38629 1.38629
19235 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19236 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
19237 1.38629 1.38629 1.38629 1.38629
19238 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19239 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
19240 1.38629 1.38629 1.38629 1.38629
19241 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19242 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
19243 1.38629 1.38629 1.38629 1.38629
19244 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19245 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
19246 1.38629 1.38629 1.38629 1.38629
19247 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19248 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
19249 1.38629 1.38629 1.38629 1.38629
19250 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19251 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
19252 1.38629 1.38629 1.38629 1.38629
19253 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19254 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
19255 1.38629 1.38629 1.38629 1.38629
19256 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19257 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
19258 1.38629 1.38629 1.38629 1.38629
19259 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19260 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
19261 1.38629 1.38629 1.38629 1.38629
19262 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19263 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
19264 1.38629 1.38629 1.38629 1.38629
19265 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19266 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
19267 1.38629 1.38629 1.38629 1.38629
19268 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19269 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
19270 1.38629 1.38629 1.38629 1.38629
19271 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19272 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
19273 1.38629 1.38629 1.38629 1.38629
19274 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19275 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
19276 1.38629 1.38629 1.38629 1.38629
19277 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19278 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
19279 1.38629 1.38629 1.38629 1.38629
19280 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19281 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
19282 1.38629 1.38629 1.38629 1.38629
19283 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19284 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
19285 1.38629 1.38629 1.38629 1.38629
19286 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19287 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
19288 1.38629 1.38629 1.38629 1.38629
19289 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19290 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
19291 1.38629 1.38629 1.38629 1.38629
19292 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19293 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
19294 1.38629 1.38629 1.38629 1.38629
19295 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19296 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
19297 1.38629 1.38629 1.38629 1.38629
19298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19299 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
19300 1.38629 1.38629 1.38629 1.38629
19301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19302 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
19303 1.38629 1.38629 1.38629 1.38629
19304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19305 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
19306 1.38629 1.38629 1.38629 1.38629
19307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19308 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
19309 1.38629 1.38629 1.38629 1.38629
19310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19311 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
19312 1.38629 1.38629 1.38629 1.38629
19313 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
19314 //
19315 HMMER3/f [3.2.1 | June 2018]
19316 NAME long.81.aln
19317 LENG 70
19318 MAXL 160
19319 ALPH DNA
19320 RF no
19321 MM no
19322 CONS yes
19323 CS no
19324 MAP yes
19325 DATE Tue May 28 13:12:02 2019
19326 NSEQ 2
19327 EFFN 2.000000
19328 CKSUM 2860632243
19329 STATS LOCAL MSV -7.8884 0.71997
19330 STATS LOCAL VITERBI -9.2337 0.71997
19331 STATS LOCAL FORWARD -3.7511 0.71997
19332 HMM A C G T
19333 m->m m->i m->d i->m i->i d->m d->d
19334 COMPO 1.14114 1.63705 1.30427 1.53889
19335 1.38629 1.38629 1.38629 1.38629
19336 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
19337 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
19338 1.38629 1.38629 1.38629 1.38629
19339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19340 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
19341 1.38629 1.38629 1.38629 1.38629
19342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19343 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
19344 1.38629 1.38629 1.38629 1.38629
19345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19346 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
19347 1.38629 1.38629 1.38629 1.38629
19348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19349 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
19350 1.38629 1.38629 1.38629 1.38629
19351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19352 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
19353 1.38629 1.38629 1.38629 1.38629
19354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19355 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
19356 1.38629 1.38629 1.38629 1.38629
19357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19358 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
19359 1.38629 1.38629 1.38629 1.38629
19360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19361 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
19362 1.38629 1.38629 1.38629 1.38629
19363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19364 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
19365 1.38629 1.38629 1.38629 1.38629
19366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19367 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
19368 1.38629 1.38629 1.38629 1.38629
19369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19370 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
19371 1.38629 1.38629 1.38629 1.38629
19372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19373 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
19374 1.38629 1.38629 1.38629 1.38629
19375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19376 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
19377 1.38629 1.38629 1.38629 1.38629
19378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19379 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
19380 1.38629 1.38629 1.38629 1.38629
19381 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19382 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
19383 1.38629 1.38629 1.38629 1.38629
19384 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19385 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
19386 1.38629 1.38629 1.38629 1.38629
19387 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19388 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
19389 1.38629 1.38629 1.38629 1.38629
19390 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19391 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
19392 1.38629 1.38629 1.38629 1.38629
19393 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19394 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
19395 1.38629 1.38629 1.38629 1.38629
19396 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19397 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
19398 1.38629 1.38629 1.38629 1.38629
19399 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19400 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
19401 1.38629 1.38629 1.38629 1.38629
19402 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19403 23 2.38910 2.82844 0.25233 2.62837 23 g - - -
19404 1.38629 1.38629 1.38629 1.38629
19405 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19406 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
19407 1.38629 1.38629 1.38629 1.38629
19408 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19409 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
19410 1.38629 1.38629 1.38629 1.38629
19411 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19412 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
19413 1.38629 1.38629 1.38629 1.38629
19414 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19415 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
19416 1.38629 1.38629 1.38629 1.38629
19417 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19418 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
19419 1.38629 1.38629 1.38629 1.38629
19420 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19421 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
19422 1.38629 1.38629 1.38629 1.38629
19423 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19424 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
19425 1.38629 1.38629 1.38629 1.38629
19426 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19427 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
19428 1.38629 1.38629 1.38629 1.38629
19429 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19430 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
19431 1.38629 1.38629 1.38629 1.38629
19432 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19433 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
19434 1.38629 1.38629 1.38629 1.38629
19435 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19436 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
19437 1.38629 1.38629 1.38629 1.38629
19438 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19439 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
19440 1.38629 1.38629 1.38629 1.38629
19441 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19442 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
19443 1.38629 1.38629 1.38629 1.38629
19444 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19445 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
19446 1.38629 1.38629 1.38629 1.38629
19447 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19448 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
19449 1.38629 1.38629 1.38629 1.38629
19450 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19451 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
19452 1.38629 1.38629 1.38629 1.38629
19453 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19454 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
19455 1.38629 1.38629 1.38629 1.38629
19456 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19457 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
19458 1.38629 1.38629 1.38629 1.38629
19459 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19460 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
19461 1.38629 1.38629 1.38629 1.38629
19462 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19463 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
19464 1.38629 1.38629 1.38629 1.38629
19465 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19466 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
19467 1.38629 1.38629 1.38629 1.38629
19468 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19469 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
19470 1.38629 1.38629 1.38629 1.38629
19471 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19472 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
19473 1.38629 1.38629 1.38629 1.38629
19474 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19475 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
19476 1.38629 1.38629 1.38629 1.38629
19477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19478 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
19479 1.38629 1.38629 1.38629 1.38629
19480 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19481 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
19482 1.38629 1.38629 1.38629 1.38629
19483 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19484 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
19485 1.38629 1.38629 1.38629 1.38629
19486 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19487 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
19488 1.38629 1.38629 1.38629 1.38629
19489 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19490 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
19491 1.38629 1.38629 1.38629 1.38629
19492 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19493 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
19494 1.38629 1.38629 1.38629 1.38629
19495 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19496 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
19497 1.38629 1.38629 1.38629 1.38629
19498 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19499 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
19500 1.38629 1.38629 1.38629 1.38629
19501 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19502 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
19503 1.38629 1.38629 1.38629 1.38629
19504 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19505 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
19506 1.38629 1.38629 1.38629 1.38629
19507 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19508 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
19509 1.38629 1.38629 1.38629 1.38629
19510 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19511 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
19512 1.38629 1.38629 1.38629 1.38629
19513 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19514 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
19515 1.38629 1.38629 1.38629 1.38629
19516 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19517 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
19518 1.38629 1.38629 1.38629 1.38629
19519 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19520 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
19521 1.38629 1.38629 1.38629 1.38629
19522 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19523 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
19524 1.38629 1.38629 1.38629 1.38629
19525 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19526 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
19527 1.38629 1.38629 1.38629 1.38629
19528 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19529 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
19530 1.38629 1.38629 1.38629 1.38629
19531 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19532 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
19533 1.38629 1.38629 1.38629 1.38629
19534 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19535 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
19536 1.38629 1.38629 1.38629 1.38629
19537 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19538 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
19539 1.38629 1.38629 1.38629 1.38629
19540 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19541 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
19542 1.38629 1.38629 1.38629 1.38629
19543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19544 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
19545 1.38629 1.38629 1.38629 1.38629
19546 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
19547 //
19548 HMMER3/f [3.2.1 | June 2018]
19549 NAME long.82.aln
19550 LENG 70
19551 MAXL 160
19552 ALPH DNA
19553 RF no
19554 MM no
19555 CONS yes
19556 CS no
19557 MAP yes
19558 DATE Tue May 28 13:12:02 2019
19559 NSEQ 2
19560 EFFN 2.000000
19561 CKSUM 2621139853
19562 STATS LOCAL MSV -7.9800 0.72086
19563 STATS LOCAL VITERBI -9.2405 0.72086
19564 STATS LOCAL FORWARD -3.6067 0.72086
19565 HMM A C G T
19566 m->m m->i m->d i->m i->i d->m d->d
19567 COMPO 1.37943 1.39613 1.41270 1.35774
19568 1.38629 1.38629 1.38629 1.38629
19569 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
19570 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
19571 1.38629 1.38629 1.38629 1.38629
19572 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19573 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
19574 1.38629 1.38629 1.38629 1.38629
19575 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19576 3 2.38910 2.82844 0.25233 2.62837 3 g - - -
19577 1.38629 1.38629 1.38629 1.38629
19578 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19579 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
19580 1.38629 1.38629 1.38629 1.38629
19581 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19582 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
19583 1.38629 1.38629 1.38629 1.38629
19584 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19585 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
19586 1.38629 1.38629 1.38629 1.38629
19587 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19588 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
19589 1.38629 1.38629 1.38629 1.38629
19590 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19591 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
19592 1.38629 1.38629 1.38629 1.38629
19593 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19594 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
19595 1.38629 1.38629 1.38629 1.38629
19596 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19597 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
19598 1.38629 1.38629 1.38629 1.38629
19599 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19600 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
19601 1.38629 1.38629 1.38629 1.38629
19602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19603 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
19604 1.38629 1.38629 1.38629 1.38629
19605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19606 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
19607 1.38629 1.38629 1.38629 1.38629
19608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19609 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
19610 1.38629 1.38629 1.38629 1.38629
19611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19612 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
19613 1.38629 1.38629 1.38629 1.38629
19614 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19615 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
19616 1.38629 1.38629 1.38629 1.38629
19617 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19618 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
19619 1.38629 1.38629 1.38629 1.38629
19620 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19621 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
19622 1.38629 1.38629 1.38629 1.38629
19623 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19624 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
19625 1.38629 1.38629 1.38629 1.38629
19626 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19627 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
19628 1.38629 1.38629 1.38629 1.38629
19629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19630 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
19631 1.38629 1.38629 1.38629 1.38629
19632 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19633 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
19634 1.38629 1.38629 1.38629 1.38629
19635 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19636 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
19637 1.38629 1.38629 1.38629 1.38629
19638 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19639 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
19640 1.38629 1.38629 1.38629 1.38629
19641 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19642 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
19643 1.38629 1.38629 1.38629 1.38629
19644 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19645 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
19646 1.38629 1.38629 1.38629 1.38629
19647 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19648 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
19649 1.38629 1.38629 1.38629 1.38629
19650 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19651 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
19652 1.38629 1.38629 1.38629 1.38629
19653 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19654 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
19655 1.38629 1.38629 1.38629 1.38629
19656 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19657 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
19658 1.38629 1.38629 1.38629 1.38629
19659 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19660 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
19661 1.38629 1.38629 1.38629 1.38629
19662 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19663 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
19664 1.38629 1.38629 1.38629 1.38629
19665 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19666 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
19667 1.38629 1.38629 1.38629 1.38629
19668 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19669 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
19670 1.38629 1.38629 1.38629 1.38629
19671 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19672 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
19673 1.38629 1.38629 1.38629 1.38629
19674 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19675 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
19676 1.38629 1.38629 1.38629 1.38629
19677 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19678 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
19679 1.38629 1.38629 1.38629 1.38629
19680 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19681 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
19682 1.38629 1.38629 1.38629 1.38629
19683 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19684 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
19685 1.38629 1.38629 1.38629 1.38629
19686 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19687 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
19688 1.38629 1.38629 1.38629 1.38629
19689 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19690 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
19691 1.38629 1.38629 1.38629 1.38629
19692 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19693 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
19694 1.38629 1.38629 1.38629 1.38629
19695 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19696 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
19697 1.38629 1.38629 1.38629 1.38629
19698 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19699 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
19700 1.38629 1.38629 1.38629 1.38629
19701 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19702 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
19703 1.38629 1.38629 1.38629 1.38629
19704 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19705 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
19706 1.38629 1.38629 1.38629 1.38629
19707 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19708 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
19709 1.38629 1.38629 1.38629 1.38629
19710 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19711 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
19712 1.38629 1.38629 1.38629 1.38629
19713 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19714 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
19715 1.38629 1.38629 1.38629 1.38629
19716 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19717 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
19718 1.38629 1.38629 1.38629 1.38629
19719 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19720 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
19721 1.38629 1.38629 1.38629 1.38629
19722 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19723 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
19724 1.38629 1.38629 1.38629 1.38629
19725 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19726 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
19727 1.38629 1.38629 1.38629 1.38629
19728 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19729 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
19730 1.38629 1.38629 1.38629 1.38629
19731 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19732 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
19733 1.38629 1.38629 1.38629 1.38629
19734 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19735 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
19736 1.38629 1.38629 1.38629 1.38629
19737 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19738 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
19739 1.38629 1.38629 1.38629 1.38629
19740 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19741 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
19742 1.38629 1.38629 1.38629 1.38629
19743 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19744 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
19745 1.38629 1.38629 1.38629 1.38629
19746 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19747 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
19748 1.38629 1.38629 1.38629 1.38629
19749 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19750 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
19751 1.38629 1.38629 1.38629 1.38629
19752 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19753 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
19754 1.38629 1.38629 1.38629 1.38629
19755 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19756 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
19757 1.38629 1.38629 1.38629 1.38629
19758 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19759 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
19760 1.38629 1.38629 1.38629 1.38629
19761 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19762 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
19763 1.38629 1.38629 1.38629 1.38629
19764 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19765 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
19766 1.38629 1.38629 1.38629 1.38629
19767 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19768 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
19769 1.38629 1.38629 1.38629 1.38629
19770 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19771 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
19772 1.38629 1.38629 1.38629 1.38629
19773 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19774 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
19775 1.38629 1.38629 1.38629 1.38629
19776 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19777 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
19778 1.38629 1.38629 1.38629 1.38629
19779 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
19780 //
19781 HMMER3/f [3.2.1 | June 2018]
19782 NAME long.83.aln
19783 LENG 70
19784 MAXL 160
19785 ALPH DNA
19786 RF no
19787 MM no
19788 CONS yes
19789 CS no
19790 MAP yes
19791 DATE Tue May 28 13:12:02 2019
19792 NSEQ 2
19793 EFFN 2.000000
19794 CKSUM 2205547240
19795 STATS LOCAL MSV -8.0191 0.72077
19796 STATS LOCAL VITERBI -9.1398 0.72077
19797 STATS LOCAL FORWARD -3.4631 0.72077
19798 HMM A C G T
19799 m->m m->i m->d i->m i->i d->m d->d
19800 COMPO 1.41098 1.49972 1.34037 1.30507
19801 1.38629 1.38629 1.38629 1.38629
19802 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
19803 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
19804 1.38629 1.38629 1.38629 1.38629
19805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19806 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
19807 1.38629 1.38629 1.38629 1.38629
19808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19809 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
19810 1.38629 1.38629 1.38629 1.38629
19811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19812 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
19813 1.38629 1.38629 1.38629 1.38629
19814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19815 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
19816 1.38629 1.38629 1.38629 1.38629
19817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19818 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
19819 1.38629 1.38629 1.38629 1.38629
19820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19821 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
19822 1.38629 1.38629 1.38629 1.38629
19823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19824 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
19825 1.38629 1.38629 1.38629 1.38629
19826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19827 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
19828 1.38629 1.38629 1.38629 1.38629
19829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19830 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
19831 1.38629 1.38629 1.38629 1.38629
19832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19833 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
19834 1.38629 1.38629 1.38629 1.38629
19835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19836 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
19837 1.38629 1.38629 1.38629 1.38629
19838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19839 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
19840 1.38629 1.38629 1.38629 1.38629
19841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19842 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
19843 1.38629 1.38629 1.38629 1.38629
19844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19845 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
19846 1.38629 1.38629 1.38629 1.38629
19847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19848 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
19849 1.38629 1.38629 1.38629 1.38629
19850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19851 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
19852 1.38629 1.38629 1.38629 1.38629
19853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19854 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
19855 1.38629 1.38629 1.38629 1.38629
19856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19857 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
19858 1.38629 1.38629 1.38629 1.38629
19859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19860 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
19861 1.38629 1.38629 1.38629 1.38629
19862 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19863 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
19864 1.38629 1.38629 1.38629 1.38629
19865 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19866 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
19867 1.38629 1.38629 1.38629 1.38629
19868 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19869 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
19870 1.38629 1.38629 1.38629 1.38629
19871 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19872 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
19873 1.38629 1.38629 1.38629 1.38629
19874 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19875 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
19876 1.38629 1.38629 1.38629 1.38629
19877 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19878 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
19879 1.38629 1.38629 1.38629 1.38629
19880 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19881 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
19882 1.38629 1.38629 1.38629 1.38629
19883 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19884 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
19885 1.38629 1.38629 1.38629 1.38629
19886 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19887 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
19888 1.38629 1.38629 1.38629 1.38629
19889 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19890 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
19891 1.38629 1.38629 1.38629 1.38629
19892 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19893 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
19894 1.38629 1.38629 1.38629 1.38629
19895 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19896 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
19897 1.38629 1.38629 1.38629 1.38629
19898 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19899 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
19900 1.38629 1.38629 1.38629 1.38629
19901 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19902 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
19903 1.38629 1.38629 1.38629 1.38629
19904 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19905 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
19906 1.38629 1.38629 1.38629 1.38629
19907 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19908 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
19909 1.38629 1.38629 1.38629 1.38629
19910 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19911 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
19912 1.38629 1.38629 1.38629 1.38629
19913 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19914 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
19915 1.38629 1.38629 1.38629 1.38629
19916 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19917 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
19918 1.38629 1.38629 1.38629 1.38629
19919 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19920 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
19921 1.38629 1.38629 1.38629 1.38629
19922 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19923 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
19924 1.38629 1.38629 1.38629 1.38629
19925 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19926 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
19927 1.38629 1.38629 1.38629 1.38629
19928 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19929 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
19930 1.38629 1.38629 1.38629 1.38629
19931 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19932 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
19933 1.38629 1.38629 1.38629 1.38629
19934 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19935 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
19936 1.38629 1.38629 1.38629 1.38629
19937 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19938 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
19939 1.38629 1.38629 1.38629 1.38629
19940 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19941 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
19942 1.38629 1.38629 1.38629 1.38629
19943 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19944 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
19945 1.38629 1.38629 1.38629 1.38629
19946 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19947 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
19948 1.38629 1.38629 1.38629 1.38629
19949 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19950 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
19951 1.38629 1.38629 1.38629 1.38629
19952 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19953 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
19954 1.38629 1.38629 1.38629 1.38629
19955 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19956 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
19957 1.38629 1.38629 1.38629 1.38629
19958 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19959 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
19960 1.38629 1.38629 1.38629 1.38629
19961 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19962 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
19963 1.38629 1.38629 1.38629 1.38629
19964 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19965 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
19966 1.38629 1.38629 1.38629 1.38629
19967 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19968 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
19969 1.38629 1.38629 1.38629 1.38629
19970 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19971 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
19972 1.38629 1.38629 1.38629 1.38629
19973 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19974 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
19975 1.38629 1.38629 1.38629 1.38629
19976 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19977 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
19978 1.38629 1.38629 1.38629 1.38629
19979 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19980 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
19981 1.38629 1.38629 1.38629 1.38629
19982 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19983 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
19984 1.38629 1.38629 1.38629 1.38629
19985 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19986 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
19987 1.38629 1.38629 1.38629 1.38629
19988 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19989 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
19990 1.38629 1.38629 1.38629 1.38629
19991 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19992 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
19993 1.38629 1.38629 1.38629 1.38629
19994 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19995 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
19996 1.38629 1.38629 1.38629 1.38629
19997 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19998 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
19999 1.38629 1.38629 1.38629 1.38629
20000 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20001 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
20002 1.38629 1.38629 1.38629 1.38629
20003 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20004 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
20005 1.38629 1.38629 1.38629 1.38629
20006 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20007 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
20008 1.38629 1.38629 1.38629 1.38629
20009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20010 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
20011 1.38629 1.38629 1.38629 1.38629
20012 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
20013 //