0
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1 HMMER3/f [3.2.1 | June 2018]
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2 NAME long.0.aln
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3 LENG 70
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4 MAXL 160
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5 ALPH DNA
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6 RF no
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7 MM no
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8 CONS yes
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9 CS no
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10 MAP yes
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11 DATE Tue May 28 13:12:02 2019
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12 NSEQ 2
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13 EFFN 2.000000
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14 CKSUM 2713552590
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15 STATS LOCAL MSV -7.8785 0.72075
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16 STATS LOCAL VITERBI -9.2080 0.72075
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17 STATS LOCAL FORWARD -3.7706 0.72075
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18 HMM A C G T
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19 m->m m->i m->d i->m i->i d->m d->d
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20 COMPO 1.11533 1.40204 1.61408 1.48269
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21 1.38629 1.38629 1.38629 1.38629
|
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22 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
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23 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
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24 1.38629 1.38629 1.38629 1.38629
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25 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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26 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
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27 1.38629 1.38629 1.38629 1.38629
|
|
28 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
29 3 2.38910 2.82844 0.25233 2.62837 3 g - - -
|
|
30 1.38629 1.38629 1.38629 1.38629
|
|
31 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
32 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
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|
33 1.38629 1.38629 1.38629 1.38629
|
|
34 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
35 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
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|
36 1.38629 1.38629 1.38629 1.38629
|
|
37 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
38 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
|
|
39 1.38629 1.38629 1.38629 1.38629
|
|
40 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
41 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
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|
42 1.38629 1.38629 1.38629 1.38629
|
|
43 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
44 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
|
|
45 1.38629 1.38629 1.38629 1.38629
|
|
46 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
47 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
48 1.38629 1.38629 1.38629 1.38629
|
|
49 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
50 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
|
|
51 1.38629 1.38629 1.38629 1.38629
|
|
52 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
53 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
|
|
54 1.38629 1.38629 1.38629 1.38629
|
|
55 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
56 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
|
|
57 1.38629 1.38629 1.38629 1.38629
|
|
58 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
59 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
|
|
60 1.38629 1.38629 1.38629 1.38629
|
|
61 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
62 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
|
|
63 1.38629 1.38629 1.38629 1.38629
|
|
64 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
65 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
66 1.38629 1.38629 1.38629 1.38629
|
|
67 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
68 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
|
|
69 1.38629 1.38629 1.38629 1.38629
|
|
70 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
71 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
|
|
72 1.38629 1.38629 1.38629 1.38629
|
|
73 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
74 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
75 1.38629 1.38629 1.38629 1.38629
|
|
76 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
77 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
78 1.38629 1.38629 1.38629 1.38629
|
|
79 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
80 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
81 1.38629 1.38629 1.38629 1.38629
|
|
82 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
83 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
|
|
84 1.38629 1.38629 1.38629 1.38629
|
|
85 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
86 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
|
|
87 1.38629 1.38629 1.38629 1.38629
|
|
88 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
89 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
90 1.38629 1.38629 1.38629 1.38629
|
|
91 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
92 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
|
|
93 1.38629 1.38629 1.38629 1.38629
|
|
94 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
95 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
96 1.38629 1.38629 1.38629 1.38629
|
|
97 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
98 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
|
|
99 1.38629 1.38629 1.38629 1.38629
|
|
100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
101 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
102 1.38629 1.38629 1.38629 1.38629
|
|
103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
104 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
105 1.38629 1.38629 1.38629 1.38629
|
|
106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
107 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
|
|
108 1.38629 1.38629 1.38629 1.38629
|
|
109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
110 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
|
|
111 1.38629 1.38629 1.38629 1.38629
|
|
112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
113 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
|
|
114 1.38629 1.38629 1.38629 1.38629
|
|
115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
116 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
117 1.38629 1.38629 1.38629 1.38629
|
|
118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
119 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
|
|
120 1.38629 1.38629 1.38629 1.38629
|
|
121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
122 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
123 1.38629 1.38629 1.38629 1.38629
|
|
124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
125 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
|
|
126 1.38629 1.38629 1.38629 1.38629
|
|
127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
128 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
|
|
129 1.38629 1.38629 1.38629 1.38629
|
|
130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
131 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
|
|
132 1.38629 1.38629 1.38629 1.38629
|
|
133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
134 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
|
|
135 1.38629 1.38629 1.38629 1.38629
|
|
136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
137 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
|
|
138 1.38629 1.38629 1.38629 1.38629
|
|
139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
140 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
|
|
141 1.38629 1.38629 1.38629 1.38629
|
|
142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
143 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
|
|
144 1.38629 1.38629 1.38629 1.38629
|
|
145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
146 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
147 1.38629 1.38629 1.38629 1.38629
|
|
148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
149 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
|
|
150 1.38629 1.38629 1.38629 1.38629
|
|
151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
152 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
|
|
153 1.38629 1.38629 1.38629 1.38629
|
|
154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
155 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
|
|
156 1.38629 1.38629 1.38629 1.38629
|
|
157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
158 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
|
|
159 1.38629 1.38629 1.38629 1.38629
|
|
160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
161 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
162 1.38629 1.38629 1.38629 1.38629
|
|
163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
164 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
|
|
165 1.38629 1.38629 1.38629 1.38629
|
|
166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
167 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
|
|
168 1.38629 1.38629 1.38629 1.38629
|
|
169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
170 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
|
|
171 1.38629 1.38629 1.38629 1.38629
|
|
172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
173 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
|
|
174 1.38629 1.38629 1.38629 1.38629
|
|
175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
176 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
177 1.38629 1.38629 1.38629 1.38629
|
|
178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
179 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
|
|
180 1.38629 1.38629 1.38629 1.38629
|
|
181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
182 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
|
|
183 1.38629 1.38629 1.38629 1.38629
|
|
184 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
185 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
|
|
186 1.38629 1.38629 1.38629 1.38629
|
|
187 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
188 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
189 1.38629 1.38629 1.38629 1.38629
|
|
190 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
191 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
|
|
192 1.38629 1.38629 1.38629 1.38629
|
|
193 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
194 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
195 1.38629 1.38629 1.38629 1.38629
|
|
196 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
197 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
|
|
198 1.38629 1.38629 1.38629 1.38629
|
|
199 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
200 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
201 1.38629 1.38629 1.38629 1.38629
|
|
202 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
203 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
|
|
204 1.38629 1.38629 1.38629 1.38629
|
|
205 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
206 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
|
|
207 1.38629 1.38629 1.38629 1.38629
|
|
208 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
209 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
210 1.38629 1.38629 1.38629 1.38629
|
|
211 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
212 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
213 1.38629 1.38629 1.38629 1.38629
|
|
214 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
215 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
|
|
216 1.38629 1.38629 1.38629 1.38629
|
|
217 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
218 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
219 1.38629 1.38629 1.38629 1.38629
|
|
220 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
221 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
222 1.38629 1.38629 1.38629 1.38629
|
|
223 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
224 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
|
|
225 1.38629 1.38629 1.38629 1.38629
|
|
226 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
227 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
228 1.38629 1.38629 1.38629 1.38629
|
|
229 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
230 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
|
|
231 1.38629 1.38629 1.38629 1.38629
|
|
232 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
233 //
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|
234 HMMER3/f [3.2.1 | June 2018]
|
|
235 NAME long.1.aln
|
|
236 LENG 79
|
|
237 MAXL 173
|
|
238 ALPH DNA
|
|
239 RF no
|
|
240 MM no
|
|
241 CONS yes
|
|
242 CS no
|
|
243 MAP yes
|
|
244 DATE Tue May 28 13:12:02 2019
|
|
245 NSEQ 2
|
|
246 EFFN 2.000000
|
|
247 CKSUM 620049805
|
|
248 STATS LOCAL MSV -7.9531 0.72095
|
|
249 STATS LOCAL VITERBI -9.7409 0.72095
|
|
250 STATS LOCAL FORWARD -3.6444 0.72095
|
|
251 HMM A C G T
|
|
252 m->m m->i m->d i->m i->i d->m d->d
|
|
253 COMPO 1.15122 1.47367 1.35292 1.62872
|
|
254 1.38629 1.38629 1.38629 1.38629
|
|
255 0.33647 3.73767 1.33977 1.46634 0.26236 0.00000 *
|
|
256 1 1.98342 0.60779 2.04641 1.66785 1 c - - -
|
|
257 1.38629 1.38629 1.38629 1.38629
|
|
258 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
259 2 1.91091 1.78233 1.95844 0.61114 2 t - - -
|
|
260 1.38629 1.38629 1.38629 1.38629
|
|
261 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
262 3 0.56139 2.08489 1.86185 1.89791 3 a - - -
|
|
263 1.38629 1.38629 1.38629 1.38629
|
|
264 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
265 4 1.91091 1.78233 1.95844 0.61114 4 t - - -
|
|
266 1.38629 1.38629 1.38629 1.38629
|
|
267 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
268 5 1.97267 2.25870 0.46443 2.05625 5 g - - -
|
|
269 1.38629 1.38629 1.38629 1.38629
|
|
270 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
271 6 1.97267 2.25870 0.46443 2.05625 6 g - - -
|
|
272 1.38629 1.38629 1.38629 1.38629
|
|
273 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
274 7 1.98342 0.60779 2.04641 1.66785 7 c - - -
|
|
275 1.38629 1.38629 1.38629 1.38629
|
|
276 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
277 8 0.56139 2.08489 1.86185 1.89791 8 a - - -
|
|
278 1.38629 1.38629 1.38629 1.38629
|
|
279 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
280 9 1.97267 2.25870 0.46443 2.05625 9 g - - -
|
|
281 1.38629 1.38629 1.38629 1.38629
|
|
282 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
|
|
283 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
|
|
284 1.38629 1.38629 1.38629 1.38629
|
|
285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
286 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
|
|
287 1.38629 1.38629 1.38629 1.38629
|
|
288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
289 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
290 1.38629 1.38629 1.38629 1.38629
|
|
291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
292 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
|
|
293 1.38629 1.38629 1.38629 1.38629
|
|
294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
295 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
|
|
296 1.38629 1.38629 1.38629 1.38629
|
|
297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
298 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
299 1.38629 1.38629 1.38629 1.38629
|
|
300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
301 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
|
|
302 1.38629 1.38629 1.38629 1.38629
|
|
303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
304 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
|
|
305 1.38629 1.38629 1.38629 1.38629
|
|
306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
307 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
|
|
308 1.38629 1.38629 1.38629 1.38629
|
|
309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
310 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
|
|
311 1.38629 1.38629 1.38629 1.38629
|
|
312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
313 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
|
|
314 1.38629 1.38629 1.38629 1.38629
|
|
315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
316 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
|
|
317 1.38629 1.38629 1.38629 1.38629
|
|
318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
319 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
320 1.38629 1.38629 1.38629 1.38629
|
|
321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
322 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
|
|
323 1.38629 1.38629 1.38629 1.38629
|
|
324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
325 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
326 1.38629 1.38629 1.38629 1.38629
|
|
327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
328 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
|
|
329 1.38629 1.38629 1.38629 1.38629
|
|
330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
331 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
|
|
332 1.38629 1.38629 1.38629 1.38629
|
|
333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
334 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
|
|
335 1.38629 1.38629 1.38629 1.38629
|
|
336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
337 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
|
|
338 1.38629 1.38629 1.38629 1.38629
|
|
339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
340 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
341 1.38629 1.38629 1.38629 1.38629
|
|
342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
343 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
|
|
344 1.38629 1.38629 1.38629 1.38629
|
|
345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
346 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
|
|
347 1.38629 1.38629 1.38629 1.38629
|
|
348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
349 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
350 1.38629 1.38629 1.38629 1.38629
|
|
351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
352 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
|
|
353 1.38629 1.38629 1.38629 1.38629
|
|
354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
355 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
356 1.38629 1.38629 1.38629 1.38629
|
|
357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
358 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
|
|
359 1.38629 1.38629 1.38629 1.38629
|
|
360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
361 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
|
|
362 1.38629 1.38629 1.38629 1.38629
|
|
363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
364 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
365 1.38629 1.38629 1.38629 1.38629
|
|
366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
367 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
|
|
368 1.38629 1.38629 1.38629 1.38629
|
|
369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
370 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
|
|
371 1.38629 1.38629 1.38629 1.38629
|
|
372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
373 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
374 1.38629 1.38629 1.38629 1.38629
|
|
375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
376 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
|
|
377 1.38629 1.38629 1.38629 1.38629
|
|
378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
379 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
380 1.38629 1.38629 1.38629 1.38629
|
|
381 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
382 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
|
|
383 1.38629 1.38629 1.38629 1.38629
|
|
384 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
385 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
|
|
386 1.38629 1.38629 1.38629 1.38629
|
|
387 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
388 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
389 1.38629 1.38629 1.38629 1.38629
|
|
390 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
391 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
|
|
392 1.38629 1.38629 1.38629 1.38629
|
|
393 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
394 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
395 1.38629 1.38629 1.38629 1.38629
|
|
396 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
397 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
|
|
398 1.38629 1.38629 1.38629 1.38629
|
|
399 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
400 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
|
|
401 1.38629 1.38629 1.38629 1.38629
|
|
402 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
403 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
|
|
404 1.38629 1.38629 1.38629 1.38629
|
|
405 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
406 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
407 1.38629 1.38629 1.38629 1.38629
|
|
408 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
409 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
|
|
410 1.38629 1.38629 1.38629 1.38629
|
|
411 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
412 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
413 1.38629 1.38629 1.38629 1.38629
|
|
414 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
415 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
|
|
416 1.38629 1.38629 1.38629 1.38629
|
|
417 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
418 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
|
|
419 1.38629 1.38629 1.38629 1.38629
|
|
420 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
421 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
|
|
422 1.38629 1.38629 1.38629 1.38629
|
|
423 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
424 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
|
|
425 1.38629 1.38629 1.38629 1.38629
|
|
426 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
427 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
|
|
428 1.38629 1.38629 1.38629 1.38629
|
|
429 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
430 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
|
|
431 1.38629 1.38629 1.38629 1.38629
|
|
432 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
433 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
434 1.38629 1.38629 1.38629 1.38629
|
|
435 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
436 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
437 1.38629 1.38629 1.38629 1.38629
|
|
438 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
439 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
|
|
440 1.38629 1.38629 1.38629 1.38629
|
|
441 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
442 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
|
|
443 1.38629 1.38629 1.38629 1.38629
|
|
444 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
445 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
446 1.38629 1.38629 1.38629 1.38629
|
|
447 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
448 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
|
|
449 1.38629 1.38629 1.38629 1.38629
|
|
450 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
451 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
452 1.38629 1.38629 1.38629 1.38629
|
|
453 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
454 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
455 1.38629 1.38629 1.38629 1.38629
|
|
456 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
457 68 1.88401 1.14290 1.03416 1.75097 68 g - - -
|
|
458 1.38629 1.38629 1.38629 1.38629
|
|
459 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
460 69 1.09289 1.89038 1.88803 1.01509 69 t - - -
|
|
461 1.38629 1.38629 1.38629 1.38629
|
|
462 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
463 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
|
|
464 1.38629 1.38629 1.38629 1.38629
|
|
465 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
|
|
466 71 1.91091 1.78233 1.95844 0.61114 71 t - - -
|
|
467 1.38629 1.38629 1.38629 1.38629
|
|
468 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
469 72 1.98342 0.60779 2.04641 1.66785 72 c - - -
|
|
470 1.38629 1.38629 1.38629 1.38629
|
|
471 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
472 73 0.56139 2.08489 1.86185 1.89791 73 a - - -
|
|
473 1.38629 1.38629 1.38629 1.38629
|
|
474 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
475 74 0.56139 2.08489 1.86185 1.89791 74 a - - -
|
|
476 1.38629 1.38629 1.38629 1.38629
|
|
477 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
478 75 0.56139 2.08489 1.86185 1.89791 75 a - - -
|
|
479 1.38629 1.38629 1.38629 1.38629
|
|
480 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
481 76 1.91091 1.78233 1.95844 0.61114 76 t - - -
|
|
482 1.38629 1.38629 1.38629 1.38629
|
|
483 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
484 77 1.98342 0.60779 2.04641 1.66785 77 c - - -
|
|
485 1.38629 1.38629 1.38629 1.38629
|
|
486 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
487 78 0.56139 2.08489 1.86185 1.89791 78 a - - -
|
|
488 1.38629 1.38629 1.38629 1.38629
|
|
489 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
490 79 1.97267 2.25870 0.46443 2.05625 79 g - - -
|
|
491 1.38629 1.38629 1.38629 1.38629
|
|
492 0.03279 3.43399 * 1.46634 0.26236 0.00000 *
|
|
493 //
|
|
494 HMMER3/f [3.2.1 | June 2018]
|
|
495 NAME long.2.aln
|
|
496 LENG 70
|
|
497 MAXL 188
|
|
498 ALPH DNA
|
|
499 RF no
|
|
500 MM no
|
|
501 CONS yes
|
|
502 CS no
|
|
503 MAP yes
|
|
504 DATE Tue May 28 13:12:02 2019
|
|
505 NSEQ 3
|
|
506 EFFN 3.000000
|
|
507 CKSUM 2903879936
|
|
508 STATS LOCAL MSV -9.1232 0.72663
|
|
509 STATS LOCAL VITERBI -9.3215 0.72663
|
|
510 STATS LOCAL FORWARD -3.0734 0.72663
|
|
511 HMM A C G T
|
|
512 m->m m->i m->d i->m i->i d->m d->d
|
|
513 COMPO 1.13844 1.68610 1.59008 1.23605
|
|
514 1.38629 1.38629 1.38629 1.38629
|
|
515 0.22977 3.95124 1.68173 1.46634 0.26236 0.00000 *
|
|
516 1 0.96677 1.92013 1.91053 1.12362 1 a - - -
|
|
517 1.38629 1.38629 1.38629 1.38629
|
|
518 0.04726 3.76874 3.76874 1.46634 0.26236 1.55497 0.23724
|
|
519 2 2.36920 2.17182 2.47016 0.34545 2 t - - -
|
|
520 1.83446 0.84257 1.83446 1.38629
|
|
521 0.42541 1.12882 3.76874 2.03997 0.13930 0.54886 0.86182
|
|
522 3 1.16410 2.43420 0.71774 2.18679 11 g - - -
|
|
523 1.38629 1.38629 1.38629 1.38629
|
|
524 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
525 4 2.00446 2.13960 0.87914 1.10134 12 g - - -
|
|
526 1.38629 1.38629 1.38629 1.38629
|
|
527 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
528 5 2.23985 1.03062 2.36449 0.81477 13 t - - -
|
|
529 1.38629 1.38629 1.38629 1.38629
|
|
530 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
531 6 0.94121 2.04768 2.06592 1.03815 14 a - - -
|
|
532 1.38629 1.38629 1.38629 1.38629
|
|
533 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
534 7 0.95731 2.35593 0.91678 2.10812 15 g - - -
|
|
535 1.38629 1.38629 1.38629 1.38629
|
|
536 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
537 8 0.94121 2.04768 2.06592 1.03815 16 a - - -
|
|
538 1.38629 1.38629 1.38629 1.38629
|
|
539 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
540 9 2.71655 2.45957 2.83486 0.23610 17 t - - -
|
|
541 1.38629 1.38629 1.38629 1.38629
|
|
542 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
543 10 2.06732 1.16410 0.86888 1.95298 18 g - - -
|
|
544 1.38629 1.38629 1.38629 1.38629
|
|
545 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
546 11 2.71655 2.45957 2.83486 0.23610 19 t - - -
|
|
547 1.38629 1.38629 1.38629 1.38629
|
|
548 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
549 12 1.16410 2.43420 0.71774 2.18679 20 g - - -
|
|
550 1.38629 1.38629 1.38629 1.38629
|
|
551 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
552 13 0.92413 1.09732 2.14928 1.87869 21 a - - -
|
|
553 1.38629 1.38629 1.38629 1.38629
|
|
554 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
555 14 2.89989 0.21012 3.04772 2.44162 22 c - - -
|
|
556 1.38629 1.38629 1.38629 1.38629
|
|
557 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
558 15 0.16029 3.12721 2.94402 2.96400 23 a - - -
|
|
559 1.38629 1.38629 1.38629 1.38629
|
|
560 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
561 16 2.00446 2.13960 0.87914 1.10134 24 g - - -
|
|
562 1.38629 1.38629 1.38629 1.38629
|
|
563 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
564 17 0.95731 2.35593 0.91678 2.10812 25 g - - -
|
|
565 1.38629 1.38629 1.38629 1.38629
|
|
566 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
567 18 0.94121 2.04768 2.06592 1.03815 26 a - - -
|
|
568 1.38629 1.38629 1.38629 1.38629
|
|
569 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
570 19 0.92413 1.09732 2.14928 1.87869 27 a - - -
|
|
571 1.38629 1.38629 1.38629 1.38629
|
|
572 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
573 20 0.16029 3.12721 2.94402 2.96400 28 a - - -
|
|
574 1.38629 1.38629 1.38629 1.38629
|
|
575 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
576 21 2.71655 2.45957 2.83486 0.23610 29 t - - -
|
|
577 1.38629 1.38629 1.38629 1.38629
|
|
578 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
579 22 2.71655 2.45957 2.83486 0.23610 30 t - - -
|
|
580 1.38629 1.38629 1.38629 1.38629
|
|
581 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
582 23 2.71655 2.45957 2.83486 0.23610 31 t - - -
|
|
583 1.38629 1.38629 1.38629 1.38629
|
|
584 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
585 24 2.71655 2.45957 2.83486 0.23610 32 t - - -
|
|
586 1.38629 1.38629 1.38629 1.38629
|
|
587 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
588 25 0.94121 2.04768 2.06592 1.03815 33 a - - -
|
|
589 1.38629 1.38629 1.38629 1.38629
|
|
590 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
591 26 0.92413 1.09732 2.14928 1.87869 34 a - - -
|
|
592 1.38629 1.38629 1.38629 1.38629
|
|
593 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
594 27 2.89989 0.21012 3.04772 2.44162 35 c - - -
|
|
595 1.38629 1.38629 1.38629 1.38629
|
|
596 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
597 28 0.16029 3.12721 2.94402 2.96400 36 a - - -
|
|
598 1.38629 1.38629 1.38629 1.38629
|
|
599 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
600 29 2.23985 1.03062 2.36449 0.81477 37 t - - -
|
|
601 1.38629 1.38629 1.38629 1.38629
|
|
602 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
603 30 1.16410 2.43420 0.71774 2.18679 38 g - - -
|
|
604 1.38629 1.38629 1.38629 1.38629
|
|
605 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
606 31 2.71655 2.45957 2.83486 0.23610 39 t - - -
|
|
607 1.38629 1.38629 1.38629 1.38629
|
|
608 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
609 32 2.72479 3.30093 0.15917 3.10680 40 g - - -
|
|
610 1.38629 1.38629 1.38629 1.38629
|
|
611 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
612 33 2.00446 2.13960 0.87914 1.10134 41 g - - -
|
|
613 1.38629 1.38629 1.38629 1.38629
|
|
614 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
615 34 0.94121 2.04768 2.06592 1.03815 42 a - - -
|
|
616 1.38629 1.38629 1.38629 1.38629
|
|
617 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
618 35 0.16029 3.12721 2.94402 2.96400 43 a - - -
|
|
619 1.38629 1.38629 1.38629 1.38629
|
|
620 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
621 36 0.16029 3.12721 2.94402 2.96400 44 a - - -
|
|
622 1.38629 1.38629 1.38629 1.38629
|
|
623 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
624 37 0.16029 3.12721 2.94402 2.96400 45 a - - -
|
|
625 1.38629 1.38629 1.38629 1.38629
|
|
626 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
627 38 0.16029 3.12721 2.94402 2.96400 46 a - - -
|
|
628 1.38629 1.38629 1.38629 1.38629
|
|
629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
630 39 2.71655 2.45957 2.83486 0.23610 47 t - - -
|
|
631 1.38629 1.38629 1.38629 1.38629
|
|
632 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
633 40 2.00446 2.13960 0.87914 1.10134 48 g - - -
|
|
634 1.38629 1.38629 1.38629 1.38629
|
|
635 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
636 41 0.94121 2.04768 2.06592 1.03815 49 a - - -
|
|
637 1.38629 1.38629 1.38629 1.38629
|
|
638 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
639 42 2.26706 0.84214 2.39363 0.98270 50 c - - -
|
|
640 1.38629 1.38629 1.38629 1.38629
|
|
641 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
642 43 0.92413 1.09732 2.14928 1.87869 51 a - - -
|
|
643 1.38629 1.38629 1.38629 1.38629
|
|
644 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
645 44 2.71655 2.45957 2.83486 0.23610 52 t - - -
|
|
646 1.38629 1.38629 1.38629 1.38629
|
|
647 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
648 45 2.72479 3.30093 0.15917 3.10680 53 g - - -
|
|
649 1.38629 1.38629 1.38629 1.38629
|
|
650 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
651 46 2.00446 2.13960 0.87914 1.10134 54 g - - -
|
|
652 1.38629 1.38629 1.38629 1.38629
|
|
653 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
654 47 2.23985 1.03062 2.36449 0.81477 55 t - - -
|
|
655 1.38629 1.38629 1.38629 1.38629
|
|
656 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
657 48 0.16029 3.12721 2.94402 2.96400 56 a - - -
|
|
658 1.38629 1.38629 1.38629 1.38629
|
|
659 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
660 49 2.06732 1.16410 0.86888 1.95298 57 g - - -
|
|
661 1.38629 1.38629 1.38629 1.38629
|
|
662 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
663 50 0.16029 3.12721 2.94402 2.96400 58 a - - -
|
|
664 2.06732 2.06732 2.06732 0.47735
|
|
665 0.34065 1.31133 3.95124 1.13545 0.38754 1.09861 0.40547
|
|
666 51 0.16029 3.12721 2.94402 2.96400 62 a - - -
|
|
667 1.38629 1.38629 1.38629 1.38629
|
|
668 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
669 52 2.89989 0.21012 3.04772 2.44162 63 c - - -
|
|
670 1.38629 1.38629 1.38629 1.38629
|
|
671 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
672 53 0.92413 1.09732 2.14928 1.87869 64 a - - -
|
|
673 1.38629 1.38629 1.38629 1.38629
|
|
674 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
675 54 1.16410 2.43420 0.71774 2.18679 65 g - - -
|
|
676 1.38629 1.38629 1.38629 1.38629
|
|
677 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
678 55 0.16029 3.12721 2.94402 2.96400 66 a - - -
|
|
679 1.38629 1.38629 1.38629 1.38629
|
|
680 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
681 56 2.71655 2.45957 2.83486 0.23610 67 t - - -
|
|
682 1.38629 1.38629 1.38629 1.38629
|
|
683 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
684 57 1.16410 2.43420 0.71774 2.18679 68 g - - -
|
|
685 1.38629 1.38629 1.38629 1.38629
|
|
686 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
687 58 2.89989 0.21012 3.04772 2.44162 69 c - - -
|
|
688 1.38629 1.38629 1.38629 1.38629
|
|
689 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
690 59 0.94121 2.04768 2.06592 1.03815 70 a - - -
|
|
691 1.38629 1.38629 1.38629 1.38629
|
|
692 0.34065 3.95124 1.31133 1.46634 0.26236 1.09861 0.40547
|
|
693 60 2.19131 2.02277 2.27840 0.42542 71 t - - -
|
|
694 1.38629 1.38629 1.38629 1.38629
|
|
695 0.05266 3.66325 3.66325 1.46634 0.26236 1.72320 0.19662
|
|
696 61 2.27199 2.66585 0.29804 2.46413 72 g - - -
|
|
697 1.38629 1.38629 1.38629 1.38629
|
|
698 0.05266 3.66325 3.66325 1.46634 0.26236 1.72320 0.19662
|
|
699 62 0.34983 2.44790 2.25491 2.26497 73 a - - -
|
|
700 1.38629 1.38629 1.38629 1.38629
|
|
701 0.05266 3.66325 3.66325 1.46634 0.26236 1.72320 0.19662
|
|
702 63 2.27199 2.66585 0.29804 2.46413 74 g - - -
|
|
703 1.38629 1.38629 1.38629 1.38629
|
|
704 0.05266 3.66325 3.66325 1.46634 0.26236 1.72320 0.19662
|
|
705 64 2.27199 2.66585 0.29804 2.46413 75 g - - -
|
|
706 1.38629 1.38629 1.38629 1.38629
|
|
707 0.05266 3.66325 3.66325 1.46634 0.26236 1.72320 0.19662
|
|
708 65 0.34983 2.44790 2.25491 2.26497 76 a - - -
|
|
709 1.38629 1.38629 1.38629 1.38629
|
|
710 0.05266 3.66325 3.66325 1.46634 0.26236 1.72320 0.19662
|
|
711 66 2.19131 2.02277 2.27840 0.42542 77 t - - -
|
|
712 1.38629 1.38629 1.38629 1.38629
|
|
713 0.05266 3.66325 3.66325 1.46634 0.26236 1.72320 0.19662
|
|
714 67 0.34983 2.44790 2.25491 2.26497 78 a - - -
|
|
715 1.38629 1.38629 1.38629 1.38629
|
|
716 0.05266 3.66325 3.66325 1.46634 0.26236 1.72320 0.19662
|
|
717 68 2.19131 2.02277 2.27840 0.42542 79 t - - -
|
|
718 1.38629 1.38629 1.38629 1.38629
|
|
719 0.05266 3.66325 3.66325 1.46634 0.26236 1.72320 0.19662
|
|
720 69 0.34983 2.44790 2.25491 2.26497 80 a - - -
|
|
721 1.38629 1.38629 1.38629 1.38629
|
|
722 0.05266 3.66325 3.66325 1.46634 0.26236 1.72320 0.19662
|
|
723 70 0.34983 2.44790 2.25491 2.26497 81 a - - -
|
|
724 1.74658 1.12199 1.74658 1.12199
|
|
725 0.29394 1.36775 * 0.82573 0.57610 0.00000 *
|
|
726 //
|
|
727 HMMER3/f [3.2.1 | June 2018]
|
|
728 NAME long.3.aln
|
|
729 LENG 70
|
|
730 MAXL 160
|
|
731 ALPH DNA
|
|
732 RF no
|
|
733 MM no
|
|
734 CONS yes
|
|
735 CS no
|
|
736 MAP yes
|
|
737 DATE Tue May 28 13:12:03 2019
|
|
738 NSEQ 2
|
|
739 EFFN 2.000000
|
|
740 CKSUM 1714318246
|
|
741 STATS LOCAL MSV -8.2025 0.72173
|
|
742 STATS LOCAL VITERBI -9.2815 0.72173
|
|
743 STATS LOCAL FORWARD -3.3965 0.72173
|
|
744 HMM A C G T
|
|
745 m->m m->i m->d i->m i->i d->m d->d
|
|
746 COMPO 1.34339 1.47570 1.65715 1.14025
|
|
747 1.38629 1.38629 1.38629 1.38629
|
|
748 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
749 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
|
|
750 1.38629 1.38629 1.38629 1.38629
|
|
751 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
752 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
|
|
753 1.38629 1.38629 1.38629 1.38629
|
|
754 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
755 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
|
|
756 1.38629 1.38629 1.38629 1.38629
|
|
757 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
758 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
|
|
759 1.38629 1.38629 1.38629 1.38629
|
|
760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
761 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
|
|
762 1.38629 1.38629 1.38629 1.38629
|
|
763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
764 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
765 1.38629 1.38629 1.38629 1.38629
|
|
766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
767 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
768 1.38629 1.38629 1.38629 1.38629
|
|
769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
770 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
771 1.38629 1.38629 1.38629 1.38629
|
|
772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
773 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
774 1.38629 1.38629 1.38629 1.38629
|
|
775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
776 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
|
|
777 1.38629 1.38629 1.38629 1.38629
|
|
778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
779 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
780 1.38629 1.38629 1.38629 1.38629
|
|
781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
782 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
|
|
783 1.38629 1.38629 1.38629 1.38629
|
|
784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
785 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
|
|
786 1.38629 1.38629 1.38629 1.38629
|
|
787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
788 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
789 1.38629 1.38629 1.38629 1.38629
|
|
790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
791 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
792 1.38629 1.38629 1.38629 1.38629
|
|
793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
794 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
795 1.38629 1.38629 1.38629 1.38629
|
|
796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
797 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
798 1.38629 1.38629 1.38629 1.38629
|
|
799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
800 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
|
|
801 1.38629 1.38629 1.38629 1.38629
|
|
802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
803 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
|
|
804 1.38629 1.38629 1.38629 1.38629
|
|
805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
806 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
|
|
807 1.38629 1.38629 1.38629 1.38629
|
|
808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
809 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
|
|
810 1.38629 1.38629 1.38629 1.38629
|
|
811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
812 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
813 1.38629 1.38629 1.38629 1.38629
|
|
814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
815 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
816 1.38629 1.38629 1.38629 1.38629
|
|
817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
818 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
|
|
819 1.38629 1.38629 1.38629 1.38629
|
|
820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
821 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
822 1.38629 1.38629 1.38629 1.38629
|
|
823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
824 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
|
|
825 1.38629 1.38629 1.38629 1.38629
|
|
826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
827 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
828 1.38629 1.38629 1.38629 1.38629
|
|
829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
830 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
|
|
831 1.38629 1.38629 1.38629 1.38629
|
|
832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
833 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
834 1.38629 1.38629 1.38629 1.38629
|
|
835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
836 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
|
|
837 1.38629 1.38629 1.38629 1.38629
|
|
838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
839 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
|
|
840 1.38629 1.38629 1.38629 1.38629
|
|
841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
842 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
843 1.38629 1.38629 1.38629 1.38629
|
|
844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
845 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
|
|
846 1.38629 1.38629 1.38629 1.38629
|
|
847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
848 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
|
|
849 1.38629 1.38629 1.38629 1.38629
|
|
850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
851 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
852 1.38629 1.38629 1.38629 1.38629
|
|
853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
854 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
|
|
855 1.38629 1.38629 1.38629 1.38629
|
|
856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
857 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
|
|
858 1.38629 1.38629 1.38629 1.38629
|
|
859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
860 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
|
|
861 1.38629 1.38629 1.38629 1.38629
|
|
862 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
863 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
864 1.38629 1.38629 1.38629 1.38629
|
|
865 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
866 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
867 1.38629 1.38629 1.38629 1.38629
|
|
868 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
869 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
|
|
870 1.38629 1.38629 1.38629 1.38629
|
|
871 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
872 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
873 1.38629 1.38629 1.38629 1.38629
|
|
874 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
875 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
876 1.38629 1.38629 1.38629 1.38629
|
|
877 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
878 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
879 1.38629 1.38629 1.38629 1.38629
|
|
880 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
881 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
|
|
882 1.38629 1.38629 1.38629 1.38629
|
|
883 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
884 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
|
|
885 1.38629 1.38629 1.38629 1.38629
|
|
886 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
887 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
|
|
888 1.38629 1.38629 1.38629 1.38629
|
|
889 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
890 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
|
|
891 1.38629 1.38629 1.38629 1.38629
|
|
892 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
893 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
|
|
894 1.38629 1.38629 1.38629 1.38629
|
|
895 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
896 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
897 1.38629 1.38629 1.38629 1.38629
|
|
898 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
899 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
900 1.38629 1.38629 1.38629 1.38629
|
|
901 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
902 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
903 1.38629 1.38629 1.38629 1.38629
|
|
904 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
905 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
|
|
906 1.38629 1.38629 1.38629 1.38629
|
|
907 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
908 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
|
|
909 1.38629 1.38629 1.38629 1.38629
|
|
910 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
911 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
|
|
912 1.38629 1.38629 1.38629 1.38629
|
|
913 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
914 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
915 1.38629 1.38629 1.38629 1.38629
|
|
916 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
917 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
|
|
918 1.38629 1.38629 1.38629 1.38629
|
|
919 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
920 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
|
|
921 1.38629 1.38629 1.38629 1.38629
|
|
922 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
923 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
|
|
924 1.38629 1.38629 1.38629 1.38629
|
|
925 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
926 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
|
|
927 1.38629 1.38629 1.38629 1.38629
|
|
928 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
929 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
930 1.38629 1.38629 1.38629 1.38629
|
|
931 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
932 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
|
|
933 1.38629 1.38629 1.38629 1.38629
|
|
934 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
935 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
|
|
936 1.38629 1.38629 1.38629 1.38629
|
|
937 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
938 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
|
|
939 1.38629 1.38629 1.38629 1.38629
|
|
940 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
941 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
942 1.38629 1.38629 1.38629 1.38629
|
|
943 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
944 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
945 1.38629 1.38629 1.38629 1.38629
|
|
946 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
947 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
948 1.38629 1.38629 1.38629 1.38629
|
|
949 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
950 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
|
|
951 1.38629 1.38629 1.38629 1.38629
|
|
952 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
953 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
|
|
954 1.38629 1.38629 1.38629 1.38629
|
|
955 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
956 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
957 1.38629 1.38629 1.38629 1.38629
|
|
958 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
959 //
|
|
960 HMMER3/f [3.2.1 | June 2018]
|
|
961 NAME long.4.aln
|
|
962 LENG 75
|
|
963 MAXL 167
|
|
964 ALPH DNA
|
|
965 RF no
|
|
966 MM no
|
|
967 CONS yes
|
|
968 CS no
|
|
969 MAP yes
|
|
970 DATE Tue May 28 13:12:03 2019
|
|
971 NSEQ 2
|
|
972 EFFN 2.000000
|
|
973 CKSUM 4254883388
|
|
974 STATS LOCAL MSV -7.9031 0.72215
|
|
975 STATS LOCAL VITERBI -9.4337 0.72215
|
|
976 STATS LOCAL FORWARD -3.6540 0.72215
|
|
977 HMM A C G T
|
|
978 m->m m->i m->d i->m i->i d->m d->d
|
|
979 COMPO 1.20862 1.43722 1.53118 1.39624
|
|
980 1.38629 1.38629 1.38629 1.38629
|
|
981 0.33647 3.73767 1.33977 1.46634 0.26236 0.00000 *
|
|
982 1 1.98342 0.60779 2.04641 1.66785 1 c - - -
|
|
983 1.38629 1.38629 1.38629 1.38629
|
|
984 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
985 2 1.98342 0.60779 2.04641 1.66785 2 c - - -
|
|
986 1.38629 1.38629 1.38629 1.38629
|
|
987 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
988 3 0.56139 2.08489 1.86185 1.89791 3 a - - -
|
|
989 1.38629 1.38629 1.38629 1.38629
|
|
990 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
991 4 0.56139 2.08489 1.86185 1.89791 4 a - - -
|
|
992 1.38629 1.38629 1.38629 1.38629
|
|
993 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
994 5 1.97267 2.25870 0.46443 2.05625 5 g - - -
|
|
995 1.38629 1.38629 1.38629 1.38629
|
|
996 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
|
|
997 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
998 1.38629 1.38629 1.38629 1.38629
|
|
999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1000 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
|
|
1001 1.38629 1.38629 1.38629 1.38629
|
|
1002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1003 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
1004 1.38629 1.38629 1.38629 1.38629
|
|
1005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1006 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
|
|
1007 1.38629 1.38629 1.38629 1.38629
|
|
1008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1009 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
|
|
1010 1.38629 1.38629 1.38629 1.38629
|
|
1011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1012 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
|
|
1013 1.38629 1.38629 1.38629 1.38629
|
|
1014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1015 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
|
|
1016 1.38629 1.38629 1.38629 1.38629
|
|
1017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1018 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
|
|
1019 1.38629 1.38629 1.38629 1.38629
|
|
1020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1021 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
1022 1.38629 1.38629 1.38629 1.38629
|
|
1023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1024 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
1025 1.38629 1.38629 1.38629 1.38629
|
|
1026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1027 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
1028 1.38629 1.38629 1.38629 1.38629
|
|
1029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1030 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
|
|
1031 1.38629 1.38629 1.38629 1.38629
|
|
1032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1033 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
1034 1.38629 1.38629 1.38629 1.38629
|
|
1035 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1036 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
1037 1.38629 1.38629 1.38629 1.38629
|
|
1038 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1039 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
1040 1.38629 1.38629 1.38629 1.38629
|
|
1041 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1042 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
|
|
1043 1.38629 1.38629 1.38629 1.38629
|
|
1044 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1045 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
1046 1.38629 1.38629 1.38629 1.38629
|
|
1047 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1048 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
1049 1.38629 1.38629 1.38629 1.38629
|
|
1050 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1051 24 1.08498 1.08670 1.94700 1.70340 24 a - - -
|
|
1052 1.38629 1.38629 1.38629 1.38629
|
|
1053 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1054 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
|
|
1055 1.38629 1.38629 1.38629 1.38629
|
|
1056 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1057 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
|
|
1058 1.38629 1.38629 1.38629 1.38629
|
|
1059 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1060 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
1061 1.38629 1.38629 1.38629 1.38629
|
|
1062 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1063 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
|
|
1064 1.38629 1.38629 1.38629 1.38629
|
|
1065 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1066 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
|
|
1067 1.38629 1.38629 1.38629 1.38629
|
|
1068 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1069 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
|
|
1070 1.38629 1.38629 1.38629 1.38629
|
|
1071 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1072 31 1.09289 1.89038 1.88803 1.01509 31 t - - -
|
|
1073 1.38629 1.38629 1.38629 1.38629
|
|
1074 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1075 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
1076 1.38629 1.38629 1.38629 1.38629
|
|
1077 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1078 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
|
|
1079 1.38629 1.38629 1.38629 1.38629
|
|
1080 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1081 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
|
|
1082 1.38629 1.38629 1.38629 1.38629
|
|
1083 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1084 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
|
|
1085 1.38629 1.38629 1.38629 1.38629
|
|
1086 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1087 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
|
|
1088 1.38629 1.38629 1.38629 1.38629
|
|
1089 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1090 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
1091 1.38629 1.38629 1.38629 1.38629
|
|
1092 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1093 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
|
|
1094 1.38629 1.38629 1.38629 1.38629
|
|
1095 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1096 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
|
|
1097 1.38629 1.38629 1.38629 1.38629
|
|
1098 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1099 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
|
|
1100 1.38629 1.38629 1.38629 1.38629
|
|
1101 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1102 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
|
|
1103 1.38629 1.38629 1.38629 1.38629
|
|
1104 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1105 42 1.88401 1.14290 1.03416 1.75097 42 g - - -
|
|
1106 1.38629 1.38629 1.38629 1.38629
|
|
1107 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1108 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
1109 1.38629 1.38629 1.38629 1.38629
|
|
1110 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1111 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
1112 1.38629 1.38629 1.38629 1.38629
|
|
1113 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1114 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
|
|
1115 1.38629 1.38629 1.38629 1.38629
|
|
1116 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1117 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
|
|
1118 1.38629 1.38629 1.38629 1.38629
|
|
1119 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1120 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
1121 1.38629 1.38629 1.38629 1.38629
|
|
1122 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1123 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
|
|
1124 1.38629 1.38629 1.38629 1.38629
|
|
1125 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1126 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
|
|
1127 1.38629 1.38629 1.38629 1.38629
|
|
1128 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1129 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
|
|
1130 1.38629 1.38629 1.38629 1.38629
|
|
1131 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1132 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
1133 1.38629 1.38629 1.38629 1.38629
|
|
1134 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1135 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
1136 1.38629 1.38629 1.38629 1.38629
|
|
1137 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1138 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
1139 1.38629 1.38629 1.38629 1.38629
|
|
1140 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1141 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
|
|
1142 1.38629 1.38629 1.38629 1.38629
|
|
1143 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1144 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
|
|
1145 1.38629 1.38629 1.38629 1.38629
|
|
1146 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1147 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
|
|
1148 1.38629 1.38629 1.38629 1.38629
|
|
1149 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1150 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
|
|
1151 1.38629 1.38629 1.38629 1.38629
|
|
1152 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1153 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
1154 1.38629 1.38629 1.38629 1.38629
|
|
1155 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1156 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
|
|
1157 1.38629 1.38629 1.38629 1.38629
|
|
1158 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1159 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
|
|
1160 1.38629 1.38629 1.38629 1.38629
|
|
1161 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1162 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
1163 1.38629 1.38629 1.38629 1.38629
|
|
1164 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1165 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
1166 1.38629 1.38629 1.38629 1.38629
|
|
1167 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1168 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
1169 1.38629 1.38629 1.38629 1.38629
|
|
1170 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1171 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
|
|
1172 1.38629 1.38629 1.38629 1.38629
|
|
1173 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1174 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
|
|
1175 1.38629 1.38629 1.38629 1.38629
|
|
1176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1177 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
|
|
1178 1.38629 1.38629 1.38629 1.38629
|
|
1179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1180 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
1181 1.38629 1.38629 1.38629 1.38629
|
|
1182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1183 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
|
|
1184 1.38629 1.38629 1.38629 1.38629
|
|
1185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1186 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
|
|
1187 1.38629 1.38629 1.38629 1.38629
|
|
1188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1189 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
|
|
1190 1.38629 1.38629 1.38629 1.38629
|
|
1191 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
|
|
1192 71 0.56139 2.08489 1.86185 1.89791 71 a - - -
|
|
1193 1.38629 1.38629 1.38629 1.38629
|
|
1194 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
1195 72 1.98342 0.60779 2.04641 1.66785 72 c - - -
|
|
1196 1.38629 1.38629 1.38629 1.38629
|
|
1197 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
1198 73 0.56139 2.08489 1.86185 1.89791 73 a - - -
|
|
1199 1.38629 1.38629 1.38629 1.38629
|
|
1200 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
1201 74 1.97267 2.25870 0.46443 2.05625 74 g - - -
|
|
1202 1.38629 1.38629 1.38629 1.38629
|
|
1203 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
1204 75 1.98342 0.60779 2.04641 1.66785 75 c - - -
|
|
1205 1.38629 1.38629 1.38629 1.38629
|
|
1206 0.03279 3.43399 * 1.46634 0.26236 0.00000 *
|
|
1207 //
|
|
1208 HMMER3/f [3.2.1 | June 2018]
|
|
1209 NAME long.5.aln
|
|
1210 LENG 70
|
|
1211 MAXL 160
|
|
1212 ALPH DNA
|
|
1213 RF no
|
|
1214 MM no
|
|
1215 CONS yes
|
|
1216 CS no
|
|
1217 MAP yes
|
|
1218 DATE Tue May 28 13:12:02 2019
|
|
1219 NSEQ 2
|
|
1220 EFFN 2.000000
|
|
1221 CKSUM 1411486405
|
|
1222 STATS LOCAL MSV -8.2242 0.72116
|
|
1223 STATS LOCAL VITERBI -9.3853 0.72116
|
|
1224 STATS LOCAL FORWARD -3.9236 0.72116
|
|
1225 HMM A C G T
|
|
1226 m->m m->i m->d i->m i->i d->m d->d
|
|
1227 COMPO 1.34233 1.63901 1.44518 1.17477
|
|
1228 1.38629 1.38629 1.38629 1.38629
|
|
1229 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
1230 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
|
|
1231 1.38629 1.38629 1.38629 1.38629
|
|
1232 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1233 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
|
|
1234 1.38629 1.38629 1.38629 1.38629
|
|
1235 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1236 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
|
|
1237 1.38629 1.38629 1.38629 1.38629
|
|
1238 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1239 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
|
|
1240 1.38629 1.38629 1.38629 1.38629
|
|
1241 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1242 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
|
|
1243 1.38629 1.38629 1.38629 1.38629
|
|
1244 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1245 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
|
|
1246 1.38629 1.38629 1.38629 1.38629
|
|
1247 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1248 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
1249 1.38629 1.38629 1.38629 1.38629
|
|
1250 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1251 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
1252 1.38629 1.38629 1.38629 1.38629
|
|
1253 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1254 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
|
|
1255 1.38629 1.38629 1.38629 1.38629
|
|
1256 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1257 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
|
|
1258 1.38629 1.38629 1.38629 1.38629
|
|
1259 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1260 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
1261 1.38629 1.38629 1.38629 1.38629
|
|
1262 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1263 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
1264 1.38629 1.38629 1.38629 1.38629
|
|
1265 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1266 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
|
|
1267 1.38629 1.38629 1.38629 1.38629
|
|
1268 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1269 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
1270 1.38629 1.38629 1.38629 1.38629
|
|
1271 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1272 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
1273 1.38629 1.38629 1.38629 1.38629
|
|
1274 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1275 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
1276 1.38629 1.38629 1.38629 1.38629
|
|
1277 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1278 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
1279 1.38629 1.38629 1.38629 1.38629
|
|
1280 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1281 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
|
|
1282 1.38629 1.38629 1.38629 1.38629
|
|
1283 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1284 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
|
|
1285 1.38629 1.38629 1.38629 1.38629
|
|
1286 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1287 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
1288 1.38629 1.38629 1.38629 1.38629
|
|
1289 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1290 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
1291 1.38629 1.38629 1.38629 1.38629
|
|
1292 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1293 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
|
|
1294 1.38629 1.38629 1.38629 1.38629
|
|
1295 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1296 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
1297 1.38629 1.38629 1.38629 1.38629
|
|
1298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1299 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
|
|
1300 1.38629 1.38629 1.38629 1.38629
|
|
1301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1302 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
|
|
1303 1.38629 1.38629 1.38629 1.38629
|
|
1304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1305 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
1306 1.38629 1.38629 1.38629 1.38629
|
|
1307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1308 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
1309 1.38629 1.38629 1.38629 1.38629
|
|
1310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1311 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
|
|
1312 1.38629 1.38629 1.38629 1.38629
|
|
1313 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1314 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
1315 1.38629 1.38629 1.38629 1.38629
|
|
1316 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1317 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
|
|
1318 1.38629 1.38629 1.38629 1.38629
|
|
1319 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1320 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
1321 1.38629 1.38629 1.38629 1.38629
|
|
1322 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1323 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
1324 1.38629 1.38629 1.38629 1.38629
|
|
1325 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1326 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
|
|
1327 1.38629 1.38629 1.38629 1.38629
|
|
1328 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1329 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
|
|
1330 1.38629 1.38629 1.38629 1.38629
|
|
1331 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1332 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
|
|
1333 1.38629 1.38629 1.38629 1.38629
|
|
1334 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1335 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
1336 1.38629 1.38629 1.38629 1.38629
|
|
1337 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1338 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
|
|
1339 1.38629 1.38629 1.38629 1.38629
|
|
1340 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1341 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
1342 1.38629 1.38629 1.38629 1.38629
|
|
1343 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1344 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
|
|
1345 1.38629 1.38629 1.38629 1.38629
|
|
1346 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1347 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
|
|
1348 1.38629 1.38629 1.38629 1.38629
|
|
1349 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1350 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
1351 1.38629 1.38629 1.38629 1.38629
|
|
1352 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1353 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
1354 1.38629 1.38629 1.38629 1.38629
|
|
1355 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1356 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
|
|
1357 1.38629 1.38629 1.38629 1.38629
|
|
1358 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1359 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
1360 1.38629 1.38629 1.38629 1.38629
|
|
1361 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1362 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
|
|
1363 1.38629 1.38629 1.38629 1.38629
|
|
1364 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1365 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
|
|
1366 1.38629 1.38629 1.38629 1.38629
|
|
1367 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1368 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
|
|
1369 1.38629 1.38629 1.38629 1.38629
|
|
1370 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1371 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
|
|
1372 1.38629 1.38629 1.38629 1.38629
|
|
1373 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1374 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
|
|
1375 1.38629 1.38629 1.38629 1.38629
|
|
1376 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1377 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
|
|
1378 1.38629 1.38629 1.38629 1.38629
|
|
1379 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1380 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
1381 1.38629 1.38629 1.38629 1.38629
|
|
1382 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1383 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
|
|
1384 1.38629 1.38629 1.38629 1.38629
|
|
1385 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1386 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
|
|
1387 1.38629 1.38629 1.38629 1.38629
|
|
1388 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1389 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
|
|
1390 1.38629 1.38629 1.38629 1.38629
|
|
1391 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1392 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
1393 1.38629 1.38629 1.38629 1.38629
|
|
1394 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1395 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
1396 1.38629 1.38629 1.38629 1.38629
|
|
1397 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1398 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
|
|
1399 1.38629 1.38629 1.38629 1.38629
|
|
1400 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1401 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
|
|
1402 1.38629 1.38629 1.38629 1.38629
|
|
1403 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1404 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
1405 1.38629 1.38629 1.38629 1.38629
|
|
1406 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1407 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
|
|
1408 1.38629 1.38629 1.38629 1.38629
|
|
1409 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1410 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
1411 1.38629 1.38629 1.38629 1.38629
|
|
1412 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1413 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
1414 1.38629 1.38629 1.38629 1.38629
|
|
1415 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1416 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
|
|
1417 1.38629 1.38629 1.38629 1.38629
|
|
1418 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1419 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
1420 1.38629 1.38629 1.38629 1.38629
|
|
1421 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1422 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
|
|
1423 1.38629 1.38629 1.38629 1.38629
|
|
1424 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1425 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
1426 1.38629 1.38629 1.38629 1.38629
|
|
1427 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1428 67 2.38910 2.82844 0.25233 2.62837 67 g - - -
|
|
1429 1.38629 1.38629 1.38629 1.38629
|
|
1430 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1431 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
|
|
1432 1.38629 1.38629 1.38629 1.38629
|
|
1433 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1434 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
|
|
1435 1.38629 1.38629 1.38629 1.38629
|
|
1436 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1437 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
|
|
1438 1.38629 1.38629 1.38629 1.38629
|
|
1439 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
1440 //
|
|
1441 HMMER3/f [3.2.1 | June 2018]
|
|
1442 NAME long.6.aln
|
|
1443 LENG 70
|
|
1444 MAXL 160
|
|
1445 ALPH DNA
|
|
1446 RF no
|
|
1447 MM no
|
|
1448 CONS yes
|
|
1449 CS no
|
|
1450 MAP yes
|
|
1451 DATE Tue May 28 13:12:02 2019
|
|
1452 NSEQ 2
|
|
1453 EFFN 2.000000
|
|
1454 CKSUM 2378325802
|
|
1455 STATS LOCAL MSV -8.3548 0.72225
|
|
1456 STATS LOCAL VITERBI -9.2925 0.72225
|
|
1457 STATS LOCAL FORWARD -3.4728 0.72225
|
|
1458 HMM A C G T
|
|
1459 m->m m->i m->d i->m i->i d->m d->d
|
|
1460 COMPO 1.44379 1.53363 1.70267 1.00506
|
|
1461 1.38629 1.38629 1.38629 1.38629
|
|
1462 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
1463 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
1464 1.38629 1.38629 1.38629 1.38629
|
|
1465 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1466 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
|
|
1467 1.38629 1.38629 1.38629 1.38629
|
|
1468 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1469 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
|
|
1470 1.38629 1.38629 1.38629 1.38629
|
|
1471 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1472 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
|
|
1473 1.38629 1.38629 1.38629 1.38629
|
|
1474 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1475 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
|
|
1476 1.38629 1.38629 1.38629 1.38629
|
|
1477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1478 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
|
|
1479 1.38629 1.38629 1.38629 1.38629
|
|
1480 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1481 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
|
|
1482 1.38629 1.38629 1.38629 1.38629
|
|
1483 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1484 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
|
|
1485 1.38629 1.38629 1.38629 1.38629
|
|
1486 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1487 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
|
|
1488 1.38629 1.38629 1.38629 1.38629
|
|
1489 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1490 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
|
|
1491 1.38629 1.38629 1.38629 1.38629
|
|
1492 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1493 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
|
|
1494 1.38629 1.38629 1.38629 1.38629
|
|
1495 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1496 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
|
|
1497 1.38629 1.38629 1.38629 1.38629
|
|
1498 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1499 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
1500 1.38629 1.38629 1.38629 1.38629
|
|
1501 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1502 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
1503 1.38629 1.38629 1.38629 1.38629
|
|
1504 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1505 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
|
|
1506 1.38629 1.38629 1.38629 1.38629
|
|
1507 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1508 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
|
|
1509 1.38629 1.38629 1.38629 1.38629
|
|
1510 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1511 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
1512 1.38629 1.38629 1.38629 1.38629
|
|
1513 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1514 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
|
|
1515 1.38629 1.38629 1.38629 1.38629
|
|
1516 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1517 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
|
|
1518 1.38629 1.38629 1.38629 1.38629
|
|
1519 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1520 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
|
|
1521 1.38629 1.38629 1.38629 1.38629
|
|
1522 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1523 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
1524 1.38629 1.38629 1.38629 1.38629
|
|
1525 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1526 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
|
|
1527 1.38629 1.38629 1.38629 1.38629
|
|
1528 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1529 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
1530 1.38629 1.38629 1.38629 1.38629
|
|
1531 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1532 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
|
|
1533 1.38629 1.38629 1.38629 1.38629
|
|
1534 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1535 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
1536 1.38629 1.38629 1.38629 1.38629
|
|
1537 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1538 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
1539 1.38629 1.38629 1.38629 1.38629
|
|
1540 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1541 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
1542 1.38629 1.38629 1.38629 1.38629
|
|
1543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1544 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
|
|
1545 1.38629 1.38629 1.38629 1.38629
|
|
1546 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1547 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
|
|
1548 1.38629 1.38629 1.38629 1.38629
|
|
1549 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1550 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
|
|
1551 1.38629 1.38629 1.38629 1.38629
|
|
1552 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1553 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
|
|
1554 1.38629 1.38629 1.38629 1.38629
|
|
1555 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1556 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
1557 1.38629 1.38629 1.38629 1.38629
|
|
1558 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1559 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
1560 1.38629 1.38629 1.38629 1.38629
|
|
1561 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1562 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
|
|
1563 1.38629 1.38629 1.38629 1.38629
|
|
1564 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1565 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
|
|
1566 1.38629 1.38629 1.38629 1.38629
|
|
1567 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1568 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
|
|
1569 1.38629 1.38629 1.38629 1.38629
|
|
1570 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1571 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
1572 1.38629 1.38629 1.38629 1.38629
|
|
1573 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1574 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
1575 1.38629 1.38629 1.38629 1.38629
|
|
1576 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1577 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
1578 1.38629 1.38629 1.38629 1.38629
|
|
1579 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1580 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
1581 1.38629 1.38629 1.38629 1.38629
|
|
1582 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1583 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
1584 1.38629 1.38629 1.38629 1.38629
|
|
1585 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1586 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
1587 1.38629 1.38629 1.38629 1.38629
|
|
1588 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1589 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
|
|
1590 1.38629 1.38629 1.38629 1.38629
|
|
1591 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1592 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
1593 1.38629 1.38629 1.38629 1.38629
|
|
1594 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1595 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
1596 1.38629 1.38629 1.38629 1.38629
|
|
1597 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1598 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
|
|
1599 1.38629 1.38629 1.38629 1.38629
|
|
1600 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1601 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
|
|
1602 1.38629 1.38629 1.38629 1.38629
|
|
1603 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1604 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
|
|
1605 1.38629 1.38629 1.38629 1.38629
|
|
1606 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1607 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
|
|
1608 1.38629 1.38629 1.38629 1.38629
|
|
1609 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1610 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
|
|
1611 1.38629 1.38629 1.38629 1.38629
|
|
1612 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1613 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
1614 1.38629 1.38629 1.38629 1.38629
|
|
1615 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1616 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
1617 1.38629 1.38629 1.38629 1.38629
|
|
1618 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1619 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
|
|
1620 1.38629 1.38629 1.38629 1.38629
|
|
1621 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1622 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
|
|
1623 1.38629 1.38629 1.38629 1.38629
|
|
1624 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1625 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
|
|
1626 1.38629 1.38629 1.38629 1.38629
|
|
1627 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1628 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
1629 1.38629 1.38629 1.38629 1.38629
|
|
1630 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1631 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
|
|
1632 1.38629 1.38629 1.38629 1.38629
|
|
1633 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1634 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
1635 1.38629 1.38629 1.38629 1.38629
|
|
1636 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1637 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
|
|
1638 1.38629 1.38629 1.38629 1.38629
|
|
1639 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1640 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
1641 1.38629 1.38629 1.38629 1.38629
|
|
1642 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1643 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
1644 1.38629 1.38629 1.38629 1.38629
|
|
1645 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1646 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
|
|
1647 1.38629 1.38629 1.38629 1.38629
|
|
1648 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1649 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
|
|
1650 1.38629 1.38629 1.38629 1.38629
|
|
1651 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1652 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
1653 1.38629 1.38629 1.38629 1.38629
|
|
1654 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1655 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
|
|
1656 1.38629 1.38629 1.38629 1.38629
|
|
1657 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1658 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
1659 1.38629 1.38629 1.38629 1.38629
|
|
1660 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1661 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
1662 1.38629 1.38629 1.38629 1.38629
|
|
1663 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1664 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
|
|
1665 1.38629 1.38629 1.38629 1.38629
|
|
1666 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1667 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
|
|
1668 1.38629 1.38629 1.38629 1.38629
|
|
1669 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1670 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
1671 1.38629 1.38629 1.38629 1.38629
|
|
1672 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
1673 //
|
|
1674 HMMER3/f [3.2.1 | June 2018]
|
|
1675 NAME long.7.aln
|
|
1676 LENG 70
|
|
1677 MAXL 160
|
|
1678 ALPH DNA
|
|
1679 RF no
|
|
1680 MM no
|
|
1681 CONS yes
|
|
1682 CS no
|
|
1683 MAP yes
|
|
1684 DATE Tue May 28 13:12:02 2019
|
|
1685 NSEQ 2
|
|
1686 EFFN 2.000000
|
|
1687 CKSUM 4123557566
|
|
1688 STATS LOCAL MSV -8.0090 0.72082
|
|
1689 STATS LOCAL VITERBI -9.1696 0.72082
|
|
1690 STATS LOCAL FORWARD -3.9325 0.72082
|
|
1691 HMM A C G T
|
|
1692 m->m m->i m->d i->m i->i d->m d->d
|
|
1693 COMPO 1.37619 1.49875 1.37513 1.30474
|
|
1694 1.38629 1.38629 1.38629 1.38629
|
|
1695 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
1696 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
|
|
1697 1.38629 1.38629 1.38629 1.38629
|
|
1698 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1699 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
|
|
1700 1.38629 1.38629 1.38629 1.38629
|
|
1701 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1702 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
|
|
1703 1.38629 1.38629 1.38629 1.38629
|
|
1704 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1705 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
|
|
1706 1.38629 1.38629 1.38629 1.38629
|
|
1707 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1708 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
|
|
1709 1.38629 1.38629 1.38629 1.38629
|
|
1710 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1711 6 2.46232 0.33808 2.58153 2.07174 6 c - - -
|
|
1712 1.38629 1.38629 1.38629 1.38629
|
|
1713 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1714 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
|
|
1715 1.38629 1.38629 1.38629 1.38629
|
|
1716 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1717 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
|
|
1718 1.38629 1.38629 1.38629 1.38629
|
|
1719 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1720 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
|
|
1721 1.38629 1.38629 1.38629 1.38629
|
|
1722 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1723 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
|
|
1724 1.38629 1.38629 1.38629 1.38629
|
|
1725 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1726 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
1727 1.38629 1.38629 1.38629 1.38629
|
|
1728 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1729 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
|
|
1730 1.38629 1.38629 1.38629 1.38629
|
|
1731 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1732 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
1733 1.38629 1.38629 1.38629 1.38629
|
|
1734 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1735 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
|
|
1736 1.38629 1.38629 1.38629 1.38629
|
|
1737 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1738 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
|
|
1739 1.38629 1.38629 1.38629 1.38629
|
|
1740 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1741 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
1742 1.38629 1.38629 1.38629 1.38629
|
|
1743 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1744 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
1745 1.38629 1.38629 1.38629 1.38629
|
|
1746 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1747 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
|
|
1748 1.38629 1.38629 1.38629 1.38629
|
|
1749 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1750 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
|
|
1751 1.38629 1.38629 1.38629 1.38629
|
|
1752 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1753 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
|
|
1754 1.38629 1.38629 1.38629 1.38629
|
|
1755 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1756 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
|
|
1757 1.38629 1.38629 1.38629 1.38629
|
|
1758 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1759 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
|
|
1760 1.38629 1.38629 1.38629 1.38629
|
|
1761 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1762 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
1763 1.38629 1.38629 1.38629 1.38629
|
|
1764 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1765 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
|
|
1766 1.38629 1.38629 1.38629 1.38629
|
|
1767 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1768 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
|
|
1769 1.38629 1.38629 1.38629 1.38629
|
|
1770 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1771 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
|
|
1772 1.38629 1.38629 1.38629 1.38629
|
|
1773 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1774 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
|
|
1775 1.38629 1.38629 1.38629 1.38629
|
|
1776 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1777 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
|
|
1778 1.38629 1.38629 1.38629 1.38629
|
|
1779 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1780 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
1781 1.38629 1.38629 1.38629 1.38629
|
|
1782 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1783 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
|
|
1784 1.38629 1.38629 1.38629 1.38629
|
|
1785 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1786 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
|
|
1787 1.38629 1.38629 1.38629 1.38629
|
|
1788 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1789 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
1790 1.38629 1.38629 1.38629 1.38629
|
|
1791 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1792 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
|
|
1793 1.38629 1.38629 1.38629 1.38629
|
|
1794 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1795 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
1796 1.38629 1.38629 1.38629 1.38629
|
|
1797 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1798 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
1799 1.38629 1.38629 1.38629 1.38629
|
|
1800 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1801 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
|
|
1802 1.38629 1.38629 1.38629 1.38629
|
|
1803 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1804 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
|
|
1805 1.38629 1.38629 1.38629 1.38629
|
|
1806 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1807 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
1808 1.38629 1.38629 1.38629 1.38629
|
|
1809 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1810 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
|
|
1811 1.38629 1.38629 1.38629 1.38629
|
|
1812 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1813 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
|
|
1814 1.38629 1.38629 1.38629 1.38629
|
|
1815 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1816 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
|
|
1817 1.38629 1.38629 1.38629 1.38629
|
|
1818 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1819 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
|
|
1820 1.38629 1.38629 1.38629 1.38629
|
|
1821 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1822 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
|
|
1823 1.38629 1.38629 1.38629 1.38629
|
|
1824 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1825 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
|
|
1826 1.38629 1.38629 1.38629 1.38629
|
|
1827 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1828 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
|
|
1829 1.38629 1.38629 1.38629 1.38629
|
|
1830 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1831 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
1832 1.38629 1.38629 1.38629 1.38629
|
|
1833 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1834 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
|
|
1835 1.38629 1.38629 1.38629 1.38629
|
|
1836 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1837 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
|
|
1838 1.38629 1.38629 1.38629 1.38629
|
|
1839 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1840 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
|
|
1841 1.38629 1.38629 1.38629 1.38629
|
|
1842 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1843 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
|
|
1844 1.38629 1.38629 1.38629 1.38629
|
|
1845 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1846 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
|
|
1847 1.38629 1.38629 1.38629 1.38629
|
|
1848 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1849 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
|
|
1850 1.38629 1.38629 1.38629 1.38629
|
|
1851 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1852 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
|
|
1853 1.38629 1.38629 1.38629 1.38629
|
|
1854 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1855 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
|
|
1856 1.38629 1.38629 1.38629 1.38629
|
|
1857 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1858 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
|
|
1859 1.38629 1.38629 1.38629 1.38629
|
|
1860 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1861 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
1862 1.38629 1.38629 1.38629 1.38629
|
|
1863 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1864 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
|
|
1865 1.38629 1.38629 1.38629 1.38629
|
|
1866 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1867 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
|
|
1868 1.38629 1.38629 1.38629 1.38629
|
|
1869 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1870 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
|
|
1871 1.38629 1.38629 1.38629 1.38629
|
|
1872 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1873 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
|
|
1874 1.38629 1.38629 1.38629 1.38629
|
|
1875 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1876 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
1877 1.38629 1.38629 1.38629 1.38629
|
|
1878 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1879 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
1880 1.38629 1.38629 1.38629 1.38629
|
|
1881 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1882 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
|
|
1883 1.38629 1.38629 1.38629 1.38629
|
|
1884 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1885 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
|
|
1886 1.38629 1.38629 1.38629 1.38629
|
|
1887 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1888 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
1889 1.38629 1.38629 1.38629 1.38629
|
|
1890 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1891 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
1892 1.38629 1.38629 1.38629 1.38629
|
|
1893 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1894 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
|
|
1895 1.38629 1.38629 1.38629 1.38629
|
|
1896 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1897 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
|
|
1898 1.38629 1.38629 1.38629 1.38629
|
|
1899 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1900 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
1901 1.38629 1.38629 1.38629 1.38629
|
|
1902 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1903 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
|
|
1904 1.38629 1.38629 1.38629 1.38629
|
|
1905 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
1906 //
|
|
1907 HMMER3/f [3.2.1 | June 2018]
|
|
1908 NAME long.8.aln
|
|
1909 LENG 72
|
|
1910 MAXL 163
|
|
1911 ALPH DNA
|
|
1912 RF no
|
|
1913 MM no
|
|
1914 CONS yes
|
|
1915 CS no
|
|
1916 MAP yes
|
|
1917 DATE Tue May 28 13:12:03 2019
|
|
1918 NSEQ 2
|
|
1919 EFFN 2.000000
|
|
1920 CKSUM 3543576690
|
|
1921 STATS LOCAL MSV -9.0934 0.74635
|
|
1922 STATS LOCAL VITERBI -10.7285 0.74635
|
|
1923 STATS LOCAL FORWARD -2.0983 0.74635
|
|
1924 HMM A C G T
|
|
1925 m->m m->i m->d i->m i->i d->m d->d
|
|
1926 COMPO 1.24351 1.59287 1.56791 1.20462
|
|
1927 1.38629 1.38629 1.38629 1.38629
|
|
1928 0.33647 3.73767 1.33977 1.46634 0.26236 0.00000 *
|
|
1929 1 0.56139 2.08489 1.86185 1.89791 1 a - - -
|
|
1930 1.38629 1.38629 1.38629 1.38629
|
|
1931 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
1932 2 1.98342 0.60779 2.04641 1.66785 2 c - - -
|
|
1933 1.38629 1.38629 1.38629 1.38629
|
|
1934 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
|
|
1935 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
|
|
1936 1.38629 1.38629 1.38629 1.38629
|
|
1937 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1938 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
|
|
1939 1.38629 1.38629 1.38629 1.38629
|
|
1940 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1941 5 2.01896 1.01168 2.12953 0.95527 5 t - - -
|
|
1942 1.38629 1.38629 1.38629 1.38629
|
|
1943 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1944 6 1.12273 2.17004 0.88086 1.92408 6 g - - -
|
|
1945 1.38629 1.38629 1.38629 1.38629
|
|
1946 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1947 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
|
|
1948 1.38629 1.38629 1.38629 1.38629
|
|
1949 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1950 8 1.09289 1.89038 1.88803 1.01509 8 t - - -
|
|
1951 1.38629 1.38629 1.38629 1.38629
|
|
1952 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1953 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
1954 1.38629 1.38629 1.38629 1.38629
|
|
1955 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1956 10 2.01896 1.01168 2.12953 0.95527 10 t - - -
|
|
1957 1.38629 1.38629 1.38629 1.38629
|
|
1958 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1959 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
1960 1.38629 1.38629 1.38629 1.38629
|
|
1961 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1962 12 1.84050 1.95342 1.03654 1.06480 12 g - - -
|
|
1963 1.38629 1.38629 1.38629 1.38629
|
|
1964 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1965 13 1.84050 1.95342 1.03654 1.06480 13 g - - -
|
|
1966 1.38629 1.38629 1.38629 1.38629
|
|
1967 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1968 14 1.08498 1.08670 1.94700 1.70340 14 a - - -
|
|
1969 1.38629 1.38629 1.38629 1.38629
|
|
1970 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1971 15 1.88401 1.14290 1.03416 1.75097 15 g - - -
|
|
1972 1.38629 1.38629 1.38629 1.38629
|
|
1973 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1974 16 1.84050 1.95342 1.03654 1.06480 16 g - - -
|
|
1975 1.38629 1.38629 1.38629 1.38629
|
|
1976 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1977 17 1.12273 2.17004 0.88086 1.92408 17 g - - -
|
|
1978 1.38629 1.38629 1.38629 1.38629
|
|
1979 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1980 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
1981 1.38629 1.38629 1.38629 1.38629
|
|
1982 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1983 19 1.09289 1.89038 1.88803 1.01509 19 t - - -
|
|
1984 1.38629 1.38629 1.38629 1.38629
|
|
1985 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1986 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
1987 1.38629 1.38629 1.38629 1.38629
|
|
1988 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1989 21 1.88401 1.14290 1.03416 1.75097 21 g - - -
|
|
1990 1.38629 1.38629 1.38629 1.38629
|
|
1991 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1992 22 1.08498 1.08670 1.94700 1.70340 22 a - - -
|
|
1993 1.38629 1.38629 1.38629 1.38629
|
|
1994 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1995 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
1996 1.38629 1.38629 1.38629 1.38629
|
|
1997 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1998 24 1.88401 1.14290 1.03416 1.75097 24 g - - -
|
|
1999 1.38629 1.38629 1.38629 1.38629
|
|
2000 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2001 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
2002 1.38629 1.38629 1.38629 1.38629
|
|
2003 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2004 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
|
|
2005 1.38629 1.38629 1.38629 1.38629
|
|
2006 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2007 27 1.88401 1.14290 1.03416 1.75097 27 g - - -
|
|
2008 1.38629 1.38629 1.38629 1.38629
|
|
2009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2010 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
2011 1.38629 1.38629 1.38629 1.38629
|
|
2012 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2013 29 1.12273 2.17004 0.88086 1.92408 29 g - - -
|
|
2014 1.38629 1.38629 1.38629 1.38629
|
|
2015 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2016 30 1.12273 2.17004 0.88086 1.92408 30 g - - -
|
|
2017 1.38629 1.38629 1.38629 1.38629
|
|
2018 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2019 31 1.08498 1.08670 1.94700 1.70340 31 a - - -
|
|
2020 1.38629 1.38629 1.38629 1.38629
|
|
2021 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2022 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
2023 1.38629 1.38629 1.38629 1.38629
|
|
2024 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2025 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
|
|
2026 1.38629 1.38629 1.38629 1.38629
|
|
2027 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2028 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
2029 1.38629 1.38629 1.38629 1.38629
|
|
2030 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2031 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
|
|
2032 1.38629 1.38629 1.38629 1.38629
|
|
2033 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2034 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
2035 1.38629 1.38629 1.38629 1.38629
|
|
2036 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2037 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
2038 1.38629 1.38629 1.38629 1.38629
|
|
2039 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2040 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
|
|
2041 1.38629 1.38629 1.38629 1.38629
|
|
2042 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2043 39 1.84050 1.95342 1.03654 1.06480 39 g - - -
|
|
2044 1.38629 1.38629 1.38629 1.38629
|
|
2045 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2046 40 2.01896 1.01168 2.12953 0.95527 40 t - - -
|
|
2047 1.38629 1.38629 1.38629 1.38629
|
|
2048 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2049 41 2.01896 1.01168 2.12953 0.95527 41 t - - -
|
|
2050 1.38629 1.38629 1.38629 1.38629
|
|
2051 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2052 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
2053 1.38629 1.38629 1.38629 1.38629
|
|
2054 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2055 43 1.88401 1.14290 1.03416 1.75097 43 g - - -
|
|
2056 1.38629 1.38629 1.38629 1.38629
|
|
2057 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2058 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
2059 1.38629 1.38629 1.38629 1.38629
|
|
2060 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2061 45 1.84050 1.95342 1.03654 1.06480 45 g - - -
|
|
2062 1.38629 1.38629 1.38629 1.38629
|
|
2063 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2064 46 1.88401 1.14290 1.03416 1.75097 46 g - - -
|
|
2065 1.38629 1.38629 1.38629 1.38629
|
|
2066 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2067 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
|
|
2068 1.38629 1.38629 1.38629 1.38629
|
|
2069 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2070 48 1.84050 1.95342 1.03654 1.06480 48 g - - -
|
|
2071 1.38629 1.38629 1.38629 1.38629
|
|
2072 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2073 49 1.88401 1.14290 1.03416 1.75097 49 g - - -
|
|
2074 1.38629 1.38629 1.38629 1.38629
|
|
2075 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2076 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
|
|
2077 1.38629 1.38629 1.38629 1.38629
|
|
2078 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2079 51 1.09289 1.89038 1.88803 1.01509 51 t - - -
|
|
2080 1.38629 1.38629 1.38629 1.38629
|
|
2081 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2082 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
|
|
2083 1.38629 1.38629 1.38629 1.38629
|
|
2084 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2085 53 2.01896 1.01168 2.12953 0.95527 53 t - - -
|
|
2086 1.38629 1.38629 1.38629 1.38629
|
|
2087 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2088 54 1.08498 1.08670 1.94700 1.70340 54 a - - -
|
|
2089 1.38629 1.38629 1.38629 1.38629
|
|
2090 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2091 55 1.88401 1.14290 1.03416 1.75097 55 g - - -
|
|
2092 1.38629 1.38629 1.38629 1.38629
|
|
2093 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2094 56 1.84050 1.95342 1.03654 1.06480 56 g - - -
|
|
2095 1.38629 1.38629 1.38629 1.38629
|
|
2096 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2097 57 1.08498 1.08670 1.94700 1.70340 57 a - - -
|
|
2098 1.38629 1.38629 1.38629 1.38629
|
|
2099 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2100 58 1.08498 1.08670 1.94700 1.70340 58 a - - -
|
|
2101 1.38629 1.38629 1.38629 1.38629
|
|
2102 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2103 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
2104 1.38629 1.38629 1.38629 1.38629
|
|
2105 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2106 60 1.12273 2.17004 0.88086 1.92408 60 g - - -
|
|
2107 1.38629 1.38629 1.38629 1.38629
|
|
2108 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2109 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
2110 1.38629 1.38629 1.38629 1.38629
|
|
2111 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2112 62 1.09289 1.89038 1.88803 1.01509 62 t - - -
|
|
2113 1.38629 1.38629 1.38629 1.38629
|
|
2114 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2115 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
|
|
2116 1.38629 1.38629 1.38629 1.38629
|
|
2117 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2118 64 2.01896 1.01168 2.12953 0.95527 64 t - - -
|
|
2119 1.38629 1.38629 1.38629 1.38629
|
|
2120 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2121 65 1.09289 1.89038 1.88803 1.01509 65 t - - -
|
|
2122 1.38629 1.38629 1.38629 1.38629
|
|
2123 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2124 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
2125 1.38629 1.38629 1.38629 1.38629
|
|
2126 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2127 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
2128 1.38629 1.38629 1.38629 1.38629
|
|
2129 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2130 68 1.84050 1.95342 1.03654 1.06480 68 g - - -
|
|
2131 1.38629 1.38629 1.38629 1.38629
|
|
2132 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2133 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
|
|
2134 1.38629 1.38629 1.38629 1.38629
|
|
2135 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2136 70 1.84050 1.95342 1.03654 1.06480 70 g - - -
|
|
2137 1.38629 1.38629 1.38629 1.38629
|
|
2138 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
|
|
2139 71 1.91091 1.78233 1.95844 0.61114 71 t - - -
|
|
2140 1.38629 1.38629 1.38629 1.38629
|
|
2141 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2142 72 1.97267 2.25870 0.46443 2.05625 72 g - - -
|
|
2143 1.38629 1.38629 1.38629 1.38629
|
|
2144 0.03279 3.43399 * 1.46634 0.26236 0.00000 *
|
|
2145 //
|
|
2146 HMMER3/f [3.2.1 | June 2018]
|
|
2147 NAME long.9.aln
|
|
2148 LENG 70
|
|
2149 MAXL 160
|
|
2150 ALPH DNA
|
|
2151 RF no
|
|
2152 MM no
|
|
2153 CONS yes
|
|
2154 CS no
|
|
2155 MAP yes
|
|
2156 DATE Tue May 28 13:12:03 2019
|
|
2157 NSEQ 2
|
|
2158 EFFN 2.000000
|
|
2159 CKSUM 158536290
|
|
2160 STATS LOCAL MSV -8.1021 0.72173
|
|
2161 STATS LOCAL VITERBI -9.2636 0.72173
|
|
2162 STATS LOCAL FORWARD -2.9700 0.72173
|
|
2163 HMM A C G T
|
|
2164 m->m m->i m->d i->m i->i d->m d->d
|
|
2165 COMPO 1.28100 1.37999 1.75596 1.21093
|
|
2166 1.38629 1.38629 1.38629 1.38629
|
|
2167 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
2168 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
|
|
2169 1.38629 1.38629 1.38629 1.38629
|
|
2170 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2171 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
|
|
2172 1.38629 1.38629 1.38629 1.38629
|
|
2173 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2174 3 2.38910 2.82844 0.25233 2.62837 3 g - - -
|
|
2175 1.38629 1.38629 1.38629 1.38629
|
|
2176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2177 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
|
|
2178 1.38629 1.38629 1.38629 1.38629
|
|
2179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2180 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
|
|
2181 1.38629 1.38629 1.38629 1.38629
|
|
2182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2183 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
2184 1.38629 1.38629 1.38629 1.38629
|
|
2185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2186 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
2187 1.38629 1.38629 1.38629 1.38629
|
|
2188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2189 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
2190 1.38629 1.38629 1.38629 1.38629
|
|
2191 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2192 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
2193 1.38629 1.38629 1.38629 1.38629
|
|
2194 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2195 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
|
|
2196 1.38629 1.38629 1.38629 1.38629
|
|
2197 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2198 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
|
|
2199 1.38629 1.38629 1.38629 1.38629
|
|
2200 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2201 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
|
|
2202 1.38629 1.38629 1.38629 1.38629
|
|
2203 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2204 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
|
|
2205 1.38629 1.38629 1.38629 1.38629
|
|
2206 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2207 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
|
|
2208 1.38629 1.38629 1.38629 1.38629
|
|
2209 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2210 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
|
|
2211 1.38629 1.38629 1.38629 1.38629
|
|
2212 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2213 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
|
|
2214 1.38629 1.38629 1.38629 1.38629
|
|
2215 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2216 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
|
|
2217 1.38629 1.38629 1.38629 1.38629
|
|
2218 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2219 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
|
|
2220 1.38629 1.38629 1.38629 1.38629
|
|
2221 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2222 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
|
|
2223 1.38629 1.38629 1.38629 1.38629
|
|
2224 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2225 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
2226 1.38629 1.38629 1.38629 1.38629
|
|
2227 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2228 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
|
|
2229 1.38629 1.38629 1.38629 1.38629
|
|
2230 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2231 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
2232 1.38629 1.38629 1.38629 1.38629
|
|
2233 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2234 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
|
|
2235 1.38629 1.38629 1.38629 1.38629
|
|
2236 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2237 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
|
|
2238 1.38629 1.38629 1.38629 1.38629
|
|
2239 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2240 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
|
|
2241 1.38629 1.38629 1.38629 1.38629
|
|
2242 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2243 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
|
|
2244 1.38629 1.38629 1.38629 1.38629
|
|
2245 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2246 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
2247 1.38629 1.38629 1.38629 1.38629
|
|
2248 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2249 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
|
|
2250 1.38629 1.38629 1.38629 1.38629
|
|
2251 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2252 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
|
|
2253 1.38629 1.38629 1.38629 1.38629
|
|
2254 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2255 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
|
|
2256 1.38629 1.38629 1.38629 1.38629
|
|
2257 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2258 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
|
|
2259 1.38629 1.38629 1.38629 1.38629
|
|
2260 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2261 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
|
|
2262 1.38629 1.38629 1.38629 1.38629
|
|
2263 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2264 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
2265 1.38629 1.38629 1.38629 1.38629
|
|
2266 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2267 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
|
|
2268 1.38629 1.38629 1.38629 1.38629
|
|
2269 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2270 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
|
|
2271 1.38629 1.38629 1.38629 1.38629
|
|
2272 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2273 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
|
|
2274 1.38629 1.38629 1.38629 1.38629
|
|
2275 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2276 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
2277 1.38629 1.38629 1.38629 1.38629
|
|
2278 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2279 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
|
|
2280 1.38629 1.38629 1.38629 1.38629
|
|
2281 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2282 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
|
|
2283 1.38629 1.38629 1.38629 1.38629
|
|
2284 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2285 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
2286 1.38629 1.38629 1.38629 1.38629
|
|
2287 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2288 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
2289 1.38629 1.38629 1.38629 1.38629
|
|
2290 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2291 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
|
|
2292 1.38629 1.38629 1.38629 1.38629
|
|
2293 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2294 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
2295 1.38629 1.38629 1.38629 1.38629
|
|
2296 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2297 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
|
|
2298 1.38629 1.38629 1.38629 1.38629
|
|
2299 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2300 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
2301 1.38629 1.38629 1.38629 1.38629
|
|
2302 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2303 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
|
|
2304 1.38629 1.38629 1.38629 1.38629
|
|
2305 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2306 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
|
|
2307 1.38629 1.38629 1.38629 1.38629
|
|
2308 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2309 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
|
|
2310 1.38629 1.38629 1.38629 1.38629
|
|
2311 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2312 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
|
|
2313 1.38629 1.38629 1.38629 1.38629
|
|
2314 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2315 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
|
|
2316 1.38629 1.38629 1.38629 1.38629
|
|
2317 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2318 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
|
|
2319 1.38629 1.38629 1.38629 1.38629
|
|
2320 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2321 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
|
|
2322 1.38629 1.38629 1.38629 1.38629
|
|
2323 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2324 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
2325 1.38629 1.38629 1.38629 1.38629
|
|
2326 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2327 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
2328 1.38629 1.38629 1.38629 1.38629
|
|
2329 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2330 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
|
|
2331 1.38629 1.38629 1.38629 1.38629
|
|
2332 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2333 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
2334 1.38629 1.38629 1.38629 1.38629
|
|
2335 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2336 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
|
|
2337 1.38629 1.38629 1.38629 1.38629
|
|
2338 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2339 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
2340 1.38629 1.38629 1.38629 1.38629
|
|
2341 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2342 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
2343 1.38629 1.38629 1.38629 1.38629
|
|
2344 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2345 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
|
|
2346 1.38629 1.38629 1.38629 1.38629
|
|
2347 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2348 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
2349 1.38629 1.38629 1.38629 1.38629
|
|
2350 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2351 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
|
|
2352 1.38629 1.38629 1.38629 1.38629
|
|
2353 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2354 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
|
|
2355 1.38629 1.38629 1.38629 1.38629
|
|
2356 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2357 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
2358 1.38629 1.38629 1.38629 1.38629
|
|
2359 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2360 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
|
|
2361 1.38629 1.38629 1.38629 1.38629
|
|
2362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2363 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
2364 1.38629 1.38629 1.38629 1.38629
|
|
2365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2366 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
|
|
2367 1.38629 1.38629 1.38629 1.38629
|
|
2368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2369 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
|
|
2370 1.38629 1.38629 1.38629 1.38629
|
|
2371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2372 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
|
|
2373 1.38629 1.38629 1.38629 1.38629
|
|
2374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2375 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
|
|
2376 1.38629 1.38629 1.38629 1.38629
|
|
2377 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
2378 //
|
|
2379 HMMER3/f [3.2.1 | June 2018]
|
|
2380 NAME long.10.aln
|
|
2381 LENG 80
|
|
2382 MAXL 174
|
|
2383 ALPH DNA
|
|
2384 RF no
|
|
2385 MM no
|
|
2386 CONS yes
|
|
2387 CS no
|
|
2388 MAP yes
|
|
2389 DATE Tue May 28 13:12:03 2019
|
|
2390 NSEQ 2
|
|
2391 EFFN 2.000000
|
|
2392 CKSUM 2350604415
|
|
2393 STATS LOCAL MSV -8.1786 0.72142
|
|
2394 STATS LOCAL VITERBI -9.7385 0.72142
|
|
2395 STATS LOCAL FORWARD -3.7323 0.72142
|
|
2396 HMM A C G T
|
|
2397 m->m m->i m->d i->m i->i d->m d->d
|
|
2398 COMPO 1.19661 1.39017 1.43397 1.55880
|
|
2399 1.38629 1.38629 1.38629 1.38629
|
|
2400 0.33647 3.73767 1.33977 1.46634 0.26236 0.00000 *
|
|
2401 1 1.97267 2.25870 0.46443 2.05625 1 g - - -
|
|
2402 1.38629 1.38629 1.38629 1.38629
|
|
2403 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2404 2 1.91091 1.78233 1.95844 0.61114 2 t - - -
|
|
2405 1.38629 1.38629 1.38629 1.38629
|
|
2406 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2407 3 1.91091 1.78233 1.95844 0.61114 3 t - - -
|
|
2408 1.38629 1.38629 1.38629 1.38629
|
|
2409 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2410 4 1.91091 1.78233 1.95844 0.61114 4 t - - -
|
|
2411 1.38629 1.38629 1.38629 1.38629
|
|
2412 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2413 5 1.91091 1.78233 1.95844 0.61114 5 t - - -
|
|
2414 1.38629 1.38629 1.38629 1.38629
|
|
2415 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2416 6 1.98342 0.60779 2.04641 1.66785 6 c - - -
|
|
2417 1.38629 1.38629 1.38629 1.38629
|
|
2418 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2419 7 0.56139 2.08489 1.86185 1.89791 7 a - - -
|
|
2420 1.38629 1.38629 1.38629 1.38629
|
|
2421 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2422 8 1.97267 2.25870 0.46443 2.05625 8 g - - -
|
|
2423 1.38629 1.38629 1.38629 1.38629
|
|
2424 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2425 9 1.98342 0.60779 2.04641 1.66785 9 c - - -
|
|
2426 1.38629 1.38629 1.38629 1.38629
|
|
2427 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2428 10 0.56139 2.08489 1.86185 1.89791 10 a - - -
|
|
2429 1.38629 1.38629 1.38629 1.38629
|
|
2430 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
|
|
2431 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
2432 1.38629 1.38629 1.38629 1.38629
|
|
2433 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2434 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
|
|
2435 1.38629 1.38629 1.38629 1.38629
|
|
2436 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2437 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
|
|
2438 1.38629 1.38629 1.38629 1.38629
|
|
2439 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2440 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
2441 1.38629 1.38629 1.38629 1.38629
|
|
2442 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2443 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
|
|
2444 1.38629 1.38629 1.38629 1.38629
|
|
2445 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2446 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
2447 1.38629 1.38629 1.38629 1.38629
|
|
2448 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2449 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
|
|
2450 1.38629 1.38629 1.38629 1.38629
|
|
2451 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2452 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
2453 1.38629 1.38629 1.38629 1.38629
|
|
2454 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2455 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
|
|
2456 1.38629 1.38629 1.38629 1.38629
|
|
2457 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2458 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
|
|
2459 1.38629 1.38629 1.38629 1.38629
|
|
2460 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2461 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
|
|
2462 1.38629 1.38629 1.38629 1.38629
|
|
2463 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2464 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
2465 1.38629 1.38629 1.38629 1.38629
|
|
2466 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2467 23 2.38910 2.82844 0.25233 2.62837 23 g - - -
|
|
2468 1.38629 1.38629 1.38629 1.38629
|
|
2469 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2470 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
|
|
2471 1.38629 1.38629 1.38629 1.38629
|
|
2472 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2473 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
2474 1.38629 1.38629 1.38629 1.38629
|
|
2475 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2476 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
|
|
2477 1.38629 1.38629 1.38629 1.38629
|
|
2478 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2479 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
|
|
2480 1.38629 1.38629 1.38629 1.38629
|
|
2481 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2482 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
|
|
2483 1.38629 1.38629 1.38629 1.38629
|
|
2484 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2485 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
2486 1.38629 1.38629 1.38629 1.38629
|
|
2487 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2488 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
|
|
2489 1.38629 1.38629 1.38629 1.38629
|
|
2490 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2491 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
|
|
2492 1.38629 1.38629 1.38629 1.38629
|
|
2493 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2494 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
|
|
2495 1.38629 1.38629 1.38629 1.38629
|
|
2496 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2497 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
|
|
2498 1.38629 1.38629 1.38629 1.38629
|
|
2499 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2500 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
2501 1.38629 1.38629 1.38629 1.38629
|
|
2502 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2503 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
|
|
2504 1.38629 1.38629 1.38629 1.38629
|
|
2505 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2506 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
|
|
2507 1.38629 1.38629 1.38629 1.38629
|
|
2508 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2509 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
2510 1.38629 1.38629 1.38629 1.38629
|
|
2511 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2512 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
2513 1.38629 1.38629 1.38629 1.38629
|
|
2514 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2515 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
2516 1.38629 1.38629 1.38629 1.38629
|
|
2517 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2518 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
2519 1.38629 1.38629 1.38629 1.38629
|
|
2520 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2521 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
|
|
2522 1.38629 1.38629 1.38629 1.38629
|
|
2523 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2524 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
2525 1.38629 1.38629 1.38629 1.38629
|
|
2526 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2527 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
|
|
2528 1.38629 1.38629 1.38629 1.38629
|
|
2529 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2530 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
|
|
2531 1.38629 1.38629 1.38629 1.38629
|
|
2532 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2533 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
|
|
2534 1.38629 1.38629 1.38629 1.38629
|
|
2535 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2536 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
|
|
2537 1.38629 1.38629 1.38629 1.38629
|
|
2538 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2539 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
2540 1.38629 1.38629 1.38629 1.38629
|
|
2541 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2542 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
|
|
2543 1.38629 1.38629 1.38629 1.38629
|
|
2544 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2545 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
|
|
2546 1.38629 1.38629 1.38629 1.38629
|
|
2547 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2548 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
|
|
2549 1.38629 1.38629 1.38629 1.38629
|
|
2550 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2551 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
2552 1.38629 1.38629 1.38629 1.38629
|
|
2553 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2554 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
2555 1.38629 1.38629 1.38629 1.38629
|
|
2556 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2557 53 1.08498 1.08670 1.94700 1.70340 53 a - - -
|
|
2558 1.38629 1.38629 1.38629 1.38629
|
|
2559 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2560 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
2561 1.38629 1.38629 1.38629 1.38629
|
|
2562 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2563 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
|
|
2564 1.38629 1.38629 1.38629 1.38629
|
|
2565 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2566 56 1.08498 1.08670 1.94700 1.70340 56 a - - -
|
|
2567 1.38629 1.38629 1.38629 1.38629
|
|
2568 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2569 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
|
|
2570 1.38629 1.38629 1.38629 1.38629
|
|
2571 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2572 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
2573 1.38629 1.38629 1.38629 1.38629
|
|
2574 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2575 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
|
|
2576 1.38629 1.38629 1.38629 1.38629
|
|
2577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2578 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
|
|
2579 1.38629 1.38629 1.38629 1.38629
|
|
2580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2581 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
|
|
2582 1.38629 1.38629 1.38629 1.38629
|
|
2583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2584 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
|
|
2585 1.38629 1.38629 1.38629 1.38629
|
|
2586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2587 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
|
|
2588 1.38629 1.38629 1.38629 1.38629
|
|
2589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2590 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
|
|
2591 1.38629 1.38629 1.38629 1.38629
|
|
2592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2593 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
|
|
2594 1.38629 1.38629 1.38629 1.38629
|
|
2595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2596 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
|
|
2597 1.38629 1.38629 1.38629 1.38629
|
|
2598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2599 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
|
|
2600 1.38629 1.38629 1.38629 1.38629
|
|
2601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2602 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
|
|
2603 1.38629 1.38629 1.38629 1.38629
|
|
2604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2605 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
2606 1.38629 1.38629 1.38629 1.38629
|
|
2607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2608 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
2609 1.38629 1.38629 1.38629 1.38629
|
|
2610 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
|
|
2611 71 1.98342 0.60779 2.04641 1.66785 71 c - - -
|
|
2612 1.38629 1.38629 1.38629 1.38629
|
|
2613 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2614 72 0.56139 2.08489 1.86185 1.89791 72 a - - -
|
|
2615 1.38629 1.38629 1.38629 1.38629
|
|
2616 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2617 73 0.56139 2.08489 1.86185 1.89791 73 a - - -
|
|
2618 1.38629 1.38629 1.38629 1.38629
|
|
2619 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2620 74 1.97267 2.25870 0.46443 2.05625 74 g - - -
|
|
2621 1.38629 1.38629 1.38629 1.38629
|
|
2622 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2623 75 1.98342 0.60779 2.04641 1.66785 75 c - - -
|
|
2624 1.38629 1.38629 1.38629 1.38629
|
|
2625 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2626 76 0.56139 2.08489 1.86185 1.89791 76 a - - -
|
|
2627 1.38629 1.38629 1.38629 1.38629
|
|
2628 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2629 77 1.97267 2.25870 0.46443 2.05625 77 g - - -
|
|
2630 1.38629 1.38629 1.38629 1.38629
|
|
2631 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2632 78 1.98342 0.60779 2.04641 1.66785 78 c - - -
|
|
2633 1.38629 1.38629 1.38629 1.38629
|
|
2634 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2635 79 1.98342 0.60779 2.04641 1.66785 79 c - - -
|
|
2636 1.38629 1.38629 1.38629 1.38629
|
|
2637 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2638 80 0.56139 2.08489 1.86185 1.89791 80 a - - -
|
|
2639 1.38629 1.38629 1.38629 1.38629
|
|
2640 0.03279 3.43399 * 1.46634 0.26236 0.00000 *
|
|
2641 //
|
|
2642 HMMER3/f [3.2.1 | June 2018]
|
|
2643 NAME long.11.aln
|
|
2644 LENG 84
|
|
2645 MAXL 179
|
|
2646 ALPH DNA
|
|
2647 RF no
|
|
2648 MM no
|
|
2649 CONS yes
|
|
2650 CS no
|
|
2651 MAP yes
|
|
2652 DATE Tue May 28 13:12:02 2019
|
|
2653 NSEQ 2
|
|
2654 EFFN 2.000000
|
|
2655 CKSUM 423631681
|
|
2656 STATS LOCAL MSV -8.6084 0.73180
|
|
2657 STATS LOCAL VITERBI -10.4859 0.73180
|
|
2658 STATS LOCAL FORWARD -2.8117 0.73180
|
|
2659 HMM A C G T
|
|
2660 m->m m->i m->d i->m i->i d->m d->d
|
|
2661 COMPO 1.35581 1.49833 1.41970 1.28384
|
|
2662 1.38629 1.38629 1.38629 1.38629
|
|
2663 0.33647 3.73767 1.33977 1.46634 0.26236 0.00000 *
|
|
2664 1 1.91091 1.78233 1.95844 0.61114 1 t - - -
|
|
2665 1.38629 1.38629 1.38629 1.38629
|
|
2666 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2667 2 1.91091 1.78233 1.95844 0.61114 2 t - - -
|
|
2668 1.38629 1.38629 1.38629 1.38629
|
|
2669 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2670 3 0.56139 2.08489 1.86185 1.89791 3 a - - -
|
|
2671 1.38629 1.38629 1.38629 1.38629
|
|
2672 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2673 4 1.97267 2.25870 0.46443 2.05625 4 g - - -
|
|
2674 1.38629 1.38629 1.38629 1.38629
|
|
2675 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2676 5 1.97267 2.25870 0.46443 2.05625 5 g - - -
|
|
2677 1.38629 1.38629 1.38629 1.38629
|
|
2678 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2679 6 1.98342 0.60779 2.04641 1.66785 6 c - - -
|
|
2680 1.38629 1.38629 1.38629 1.38629
|
|
2681 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2682 7 1.98342 0.60779 2.04641 1.66785 7 c - - -
|
|
2683 1.38629 1.38629 1.38629 1.38629
|
|
2684 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2685 8 0.56139 2.08489 1.86185 1.89791 8 a - - -
|
|
2686 1.38629 1.38629 1.38629 1.38629
|
|
2687 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2688 9 1.97267 2.25870 0.46443 2.05625 9 g - - -
|
|
2689 1.38629 1.38629 1.38629 1.38629
|
|
2690 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2691 10 1.91091 1.78233 1.95844 0.61114 10 t - - -
|
|
2692 1.38629 1.38629 1.38629 1.38629
|
|
2693 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2694 11 0.56139 2.08489 1.86185 1.89791 11 a - - -
|
|
2695 1.38629 1.38629 1.38629 1.38629
|
|
2696 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2697 12 1.97267 2.25870 0.46443 2.05625 12 g - - -
|
|
2698 1.38629 1.38629 1.38629 1.38629
|
|
2699 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2700 13 1.91091 1.78233 1.95844 0.61114 13 t - - -
|
|
2701 1.38629 1.38629 1.38629 1.38629
|
|
2702 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2703 14 0.56139 2.08489 1.86185 1.89791 14 a - - -
|
|
2704 1.38629 1.38629 1.38629 1.38629
|
|
2705 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
|
|
2706 15 2.01896 1.01168 2.12953 0.95527 15 t - - -
|
|
2707 1.38629 1.38629 1.38629 1.38629
|
|
2708 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2709 16 2.01896 1.01168 2.12953 0.95527 16 t - - -
|
|
2710 1.38629 1.38629 1.38629 1.38629
|
|
2711 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2712 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
2713 1.38629 1.38629 1.38629 1.38629
|
|
2714 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2715 18 1.08498 1.08670 1.94700 1.70340 18 a - - -
|
|
2716 1.38629 1.38629 1.38629 1.38629
|
|
2717 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2718 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
|
|
2719 1.38629 1.38629 1.38629 1.38629
|
|
2720 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2721 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
2722 1.38629 1.38629 1.38629 1.38629
|
|
2723 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2724 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
|
|
2725 1.38629 1.38629 1.38629 1.38629
|
|
2726 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2727 22 1.09289 1.89038 1.88803 1.01509 22 t - - -
|
|
2728 1.38629 1.38629 1.38629 1.38629
|
|
2729 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2730 23 1.09289 1.89038 1.88803 1.01509 23 t - - -
|
|
2731 1.38629 1.38629 1.38629 1.38629
|
|
2732 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2733 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
|
|
2734 1.38629 1.38629 1.38629 1.38629
|
|
2735 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2736 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
|
|
2737 1.38629 1.38629 1.38629 1.38629
|
|
2738 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2739 26 1.84050 1.95342 1.03654 1.06480 26 g - - -
|
|
2740 1.38629 1.38629 1.38629 1.38629
|
|
2741 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2742 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
|
|
2743 1.38629 1.38629 1.38629 1.38629
|
|
2744 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2745 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
2746 1.38629 1.38629 1.38629 1.38629
|
|
2747 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2748 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
|
|
2749 1.38629 1.38629 1.38629 1.38629
|
|
2750 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2751 30 2.01896 1.01168 2.12953 0.95527 30 t - - -
|
|
2752 1.38629 1.38629 1.38629 1.38629
|
|
2753 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2754 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
2755 1.38629 1.38629 1.38629 1.38629
|
|
2756 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2757 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
2758 1.38629 1.38629 1.38629 1.38629
|
|
2759 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2760 33 1.12273 2.17004 0.88086 1.92408 33 g - - -
|
|
2761 1.38629 1.38629 1.38629 1.38629
|
|
2762 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2763 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
2764 1.38629 1.38629 1.38629 1.38629
|
|
2765 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2766 35 2.01896 1.01168 2.12953 0.95527 35 t - - -
|
|
2767 1.38629 1.38629 1.38629 1.38629
|
|
2768 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2769 36 1.84050 1.95342 1.03654 1.06480 36 g - - -
|
|
2770 1.38629 1.38629 1.38629 1.38629
|
|
2771 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2772 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
|
|
2773 1.38629 1.38629 1.38629 1.38629
|
|
2774 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2775 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
|
|
2776 1.38629 1.38629 1.38629 1.38629
|
|
2777 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2778 39 1.08498 1.08670 1.94700 1.70340 39 a - - -
|
|
2779 1.38629 1.38629 1.38629 1.38629
|
|
2780 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2781 40 1.12273 2.17004 0.88086 1.92408 40 g - - -
|
|
2782 1.38629 1.38629 1.38629 1.38629
|
|
2783 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2784 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
2785 1.38629 1.38629 1.38629 1.38629
|
|
2786 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2787 42 2.01896 1.01168 2.12953 0.95527 42 t - - -
|
|
2788 1.38629 1.38629 1.38629 1.38629
|
|
2789 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2790 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
2791 1.38629 1.38629 1.38629 1.38629
|
|
2792 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2793 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
|
|
2794 1.38629 1.38629 1.38629 1.38629
|
|
2795 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2796 45 1.12273 2.17004 0.88086 1.92408 45 g - - -
|
|
2797 1.38629 1.38629 1.38629 1.38629
|
|
2798 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2799 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
|
|
2800 1.38629 1.38629 1.38629 1.38629
|
|
2801 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2802 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
2803 1.38629 1.38629 1.38629 1.38629
|
|
2804 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2805 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
|
|
2806 1.38629 1.38629 1.38629 1.38629
|
|
2807 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2808 49 1.08498 1.08670 1.94700 1.70340 49 a - - -
|
|
2809 1.38629 1.38629 1.38629 1.38629
|
|
2810 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2811 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
|
|
2812 1.38629 1.38629 1.38629 1.38629
|
|
2813 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2814 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
|
|
2815 1.38629 1.38629 1.38629 1.38629
|
|
2816 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2817 52 1.09289 1.89038 1.88803 1.01509 52 t - - -
|
|
2818 1.38629 1.38629 1.38629 1.38629
|
|
2819 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2820 53 1.09289 1.89038 1.88803 1.01509 53 t - - -
|
|
2821 1.38629 1.38629 1.38629 1.38629
|
|
2822 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2823 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
|
|
2824 1.38629 1.38629 1.38629 1.38629
|
|
2825 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2826 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
2827 1.38629 1.38629 1.38629 1.38629
|
|
2828 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2829 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
|
|
2830 1.38629 1.38629 1.38629 1.38629
|
|
2831 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2832 57 1.84050 1.95342 1.03654 1.06480 57 g - - -
|
|
2833 1.38629 1.38629 1.38629 1.38629
|
|
2834 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2835 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
|
|
2836 1.38629 1.38629 1.38629 1.38629
|
|
2837 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2838 59 1.12273 2.17004 0.88086 1.92408 59 g - - -
|
|
2839 1.38629 1.38629 1.38629 1.38629
|
|
2840 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2841 60 1.12273 2.17004 0.88086 1.92408 60 g - - -
|
|
2842 1.38629 1.38629 1.38629 1.38629
|
|
2843 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2844 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
2845 1.38629 1.38629 1.38629 1.38629
|
|
2846 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2847 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
2848 1.38629 1.38629 1.38629 1.38629
|
|
2849 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2850 63 1.08498 1.08670 1.94700 1.70340 63 a - - -
|
|
2851 1.38629 1.38629 1.38629 1.38629
|
|
2852 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2853 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
2854 1.38629 1.38629 1.38629 1.38629
|
|
2855 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
|
|
2856 65 0.56139 2.08489 1.86185 1.89791 65 a - - -
|
|
2857 1.38629 1.38629 1.38629 1.38629
|
|
2858 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2859 66 1.98342 0.60779 2.04641 1.66785 66 c - - -
|
|
2860 1.38629 1.38629 1.38629 1.38629
|
|
2861 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2862 67 1.91091 1.78233 1.95844 0.61114 67 t - - -
|
|
2863 1.38629 1.38629 1.38629 1.38629
|
|
2864 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2865 68 1.97267 2.25870 0.46443 2.05625 68 g - - -
|
|
2866 1.38629 1.38629 1.38629 1.38629
|
|
2867 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2868 69 1.97267 2.25870 0.46443 2.05625 69 g - - -
|
|
2869 1.38629 1.38629 1.38629 1.38629
|
|
2870 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2871 70 1.98342 0.60779 2.04641 1.66785 70 c - - -
|
|
2872 1.38629 1.38629 1.38629 1.38629
|
|
2873 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2874 71 1.98342 0.60779 2.04641 1.66785 71 c - - -
|
|
2875 1.38629 1.38629 1.38629 1.38629
|
|
2876 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
|
|
2877 72 2.31486 2.12647 2.41211 0.36768 72 t - - -
|
|
2878 1.38629 1.38629 1.38629 1.38629
|
|
2879 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2880 73 0.28818 2.60848 2.42319 2.42940 73 a - - -
|
|
2881 1.38629 1.38629 1.38629 1.38629
|
|
2882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2883 74 1.12273 2.17004 0.88086 1.92408 74 g - - -
|
|
2884 1.38629 1.38629 1.38629 1.38629
|
|
2885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2886 75 1.09289 1.89038 1.88803 1.01509 75 t - - -
|
|
2887 1.38629 1.38629 1.38629 1.38629
|
|
2888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2889 76 2.31486 2.12647 2.41211 0.36768 76 t - - -
|
|
2890 1.38629 1.38629 1.38629 1.38629
|
|
2891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2892 77 2.46232 0.33808 2.58153 2.07174 77 c - - -
|
|
2893 1.38629 1.38629 1.38629 1.38629
|
|
2894 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
|
|
2895 78 1.98342 0.60779 2.04641 1.66785 78 c - - -
|
|
2896 1.38629 1.38629 1.38629 1.38629
|
|
2897 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2898 79 0.56139 2.08489 1.86185 1.89791 79 a - - -
|
|
2899 1.38629 1.38629 1.38629 1.38629
|
|
2900 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2901 80 1.91091 1.78233 1.95844 0.61114 80 t - - -
|
|
2902 1.38629 1.38629 1.38629 1.38629
|
|
2903 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2904 81 1.97267 2.25870 0.46443 2.05625 81 g - - -
|
|
2905 1.38629 1.38629 1.38629 1.38629
|
|
2906 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2907 82 1.91091 1.78233 1.95844 0.61114 82 t - - -
|
|
2908 1.38629 1.38629 1.38629 1.38629
|
|
2909 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2910 83 1.97267 2.25870 0.46443 2.05625 83 g - - -
|
|
2911 1.38629 1.38629 1.38629 1.38629
|
|
2912 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
2913 84 1.91091 1.78233 1.95844 0.61114 84 t - - -
|
|
2914 1.38629 1.38629 1.38629 1.38629
|
|
2915 0.03279 3.43399 * 1.46634 0.26236 0.00000 *
|
|
2916 //
|
|
2917 HMMER3/f [3.2.1 | June 2018]
|
|
2918 NAME long.12.aln
|
|
2919 LENG 70
|
|
2920 MAXL 160
|
|
2921 ALPH DNA
|
|
2922 RF no
|
|
2923 MM no
|
|
2924 CONS yes
|
|
2925 CS no
|
|
2926 MAP yes
|
|
2927 DATE Tue May 28 13:12:03 2019
|
|
2928 NSEQ 2
|
|
2929 EFFN 2.000000
|
|
2930 CKSUM 1255752143
|
|
2931 STATS LOCAL MSV -8.3243 0.72219
|
|
2932 STATS LOCAL VITERBI -9.3425 0.72219
|
|
2933 STATS LOCAL FORWARD -3.3292 0.72219
|
|
2934 HMM A C G T
|
|
2935 m->m m->i m->d i->m i->i d->m d->d
|
|
2936 COMPO 1.40795 1.57292 1.70188 1.00628
|
|
2937 1.38629 1.38629 1.38629 1.38629
|
|
2938 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
2939 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
2940 1.38629 1.38629 1.38629 1.38629
|
|
2941 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2942 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
|
|
2943 1.38629 1.38629 1.38629 1.38629
|
|
2944 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2945 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
|
|
2946 1.38629 1.38629 1.38629 1.38629
|
|
2947 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2948 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
|
|
2949 1.38629 1.38629 1.38629 1.38629
|
|
2950 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2951 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
|
|
2952 1.38629 1.38629 1.38629 1.38629
|
|
2953 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2954 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
2955 1.38629 1.38629 1.38629 1.38629
|
|
2956 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2957 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
|
|
2958 1.38629 1.38629 1.38629 1.38629
|
|
2959 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2960 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
|
|
2961 1.38629 1.38629 1.38629 1.38629
|
|
2962 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2963 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
2964 1.38629 1.38629 1.38629 1.38629
|
|
2965 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2966 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
2967 1.38629 1.38629 1.38629 1.38629
|
|
2968 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2969 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
2970 1.38629 1.38629 1.38629 1.38629
|
|
2971 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2972 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
|
|
2973 1.38629 1.38629 1.38629 1.38629
|
|
2974 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2975 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
2976 1.38629 1.38629 1.38629 1.38629
|
|
2977 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2978 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
|
|
2979 1.38629 1.38629 1.38629 1.38629
|
|
2980 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2981 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
|
|
2982 1.38629 1.38629 1.38629 1.38629
|
|
2983 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2984 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
|
|
2985 1.38629 1.38629 1.38629 1.38629
|
|
2986 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2987 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
2988 1.38629 1.38629 1.38629 1.38629
|
|
2989 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2990 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
2991 1.38629 1.38629 1.38629 1.38629
|
|
2992 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2993 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
2994 1.38629 1.38629 1.38629 1.38629
|
|
2995 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2996 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
2997 1.38629 1.38629 1.38629 1.38629
|
|
2998 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2999 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
|
|
3000 1.38629 1.38629 1.38629 1.38629
|
|
3001 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3002 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
|
|
3003 1.38629 1.38629 1.38629 1.38629
|
|
3004 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3005 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
|
|
3006 1.38629 1.38629 1.38629 1.38629
|
|
3007 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3008 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
|
|
3009 1.38629 1.38629 1.38629 1.38629
|
|
3010 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3011 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
3012 1.38629 1.38629 1.38629 1.38629
|
|
3013 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3014 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
|
|
3015 1.38629 1.38629 1.38629 1.38629
|
|
3016 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3017 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
3018 1.38629 1.38629 1.38629 1.38629
|
|
3019 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3020 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
3021 1.38629 1.38629 1.38629 1.38629
|
|
3022 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3023 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
|
|
3024 1.38629 1.38629 1.38629 1.38629
|
|
3025 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3026 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
|
|
3027 1.38629 1.38629 1.38629 1.38629
|
|
3028 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3029 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
|
|
3030 1.38629 1.38629 1.38629 1.38629
|
|
3031 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3032 32 2.38910 2.82844 0.25233 2.62837 32 g - - -
|
|
3033 1.38629 1.38629 1.38629 1.38629
|
|
3034 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3035 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
3036 1.38629 1.38629 1.38629 1.38629
|
|
3037 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3038 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
3039 1.38629 1.38629 1.38629 1.38629
|
|
3040 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3041 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
|
|
3042 1.38629 1.38629 1.38629 1.38629
|
|
3043 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3044 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
3045 1.38629 1.38629 1.38629 1.38629
|
|
3046 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3047 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
|
|
3048 1.38629 1.38629 1.38629 1.38629
|
|
3049 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3050 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
3051 1.38629 1.38629 1.38629 1.38629
|
|
3052 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3053 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
|
|
3054 1.38629 1.38629 1.38629 1.38629
|
|
3055 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3056 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
3057 1.38629 1.38629 1.38629 1.38629
|
|
3058 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3059 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
3060 1.38629 1.38629 1.38629 1.38629
|
|
3061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3062 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
|
|
3063 1.38629 1.38629 1.38629 1.38629
|
|
3064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3065 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
3066 1.38629 1.38629 1.38629 1.38629
|
|
3067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3068 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
3069 1.38629 1.38629 1.38629 1.38629
|
|
3070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3071 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
|
|
3072 1.38629 1.38629 1.38629 1.38629
|
|
3073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3074 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
|
|
3075 1.38629 1.38629 1.38629 1.38629
|
|
3076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3077 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
|
|
3078 1.38629 1.38629 1.38629 1.38629
|
|
3079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3080 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
|
|
3081 1.38629 1.38629 1.38629 1.38629
|
|
3082 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3083 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
|
|
3084 1.38629 1.38629 1.38629 1.38629
|
|
3085 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3086 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
|
|
3087 1.38629 1.38629 1.38629 1.38629
|
|
3088 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3089 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
3090 1.38629 1.38629 1.38629 1.38629
|
|
3091 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3092 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
|
|
3093 1.38629 1.38629 1.38629 1.38629
|
|
3094 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3095 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
|
|
3096 1.38629 1.38629 1.38629 1.38629
|
|
3097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3098 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
|
|
3099 1.38629 1.38629 1.38629 1.38629
|
|
3100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3101 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
3102 1.38629 1.38629 1.38629 1.38629
|
|
3103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3104 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
3105 1.38629 1.38629 1.38629 1.38629
|
|
3106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3107 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
|
|
3108 1.38629 1.38629 1.38629 1.38629
|
|
3109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3110 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
|
|
3111 1.38629 1.38629 1.38629 1.38629
|
|
3112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3113 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
3114 1.38629 1.38629 1.38629 1.38629
|
|
3115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3116 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
|
|
3117 1.38629 1.38629 1.38629 1.38629
|
|
3118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3119 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
3120 1.38629 1.38629 1.38629 1.38629
|
|
3121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3122 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
|
|
3123 1.38629 1.38629 1.38629 1.38629
|
|
3124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3125 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
|
|
3126 1.38629 1.38629 1.38629 1.38629
|
|
3127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3128 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
|
|
3129 1.38629 1.38629 1.38629 1.38629
|
|
3130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3131 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
|
|
3132 1.38629 1.38629 1.38629 1.38629
|
|
3133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3134 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
3135 1.38629 1.38629 1.38629 1.38629
|
|
3136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3137 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
|
|
3138 1.38629 1.38629 1.38629 1.38629
|
|
3139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3140 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
|
|
3141 1.38629 1.38629 1.38629 1.38629
|
|
3142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3143 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
|
|
3144 1.38629 1.38629 1.38629 1.38629
|
|
3145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3146 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
|
|
3147 1.38629 1.38629 1.38629 1.38629
|
|
3148 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
3149 //
|
|
3150 HMMER3/f [3.2.1 | June 2018]
|
|
3151 NAME long.13.aln
|
|
3152 LENG 70
|
|
3153 MAXL 160
|
|
3154 ALPH DNA
|
|
3155 RF no
|
|
3156 MM no
|
|
3157 CONS yes
|
|
3158 CS no
|
|
3159 MAP yes
|
|
3160 DATE Tue May 28 13:12:03 2019
|
|
3161 NSEQ 2
|
|
3162 EFFN 2.000000
|
|
3163 CKSUM 3041144465
|
|
3164 STATS LOCAL MSV -8.3628 0.72226
|
|
3165 STATS LOCAL VITERBI -9.5188 0.72226
|
|
3166 STATS LOCAL FORWARD -3.8436 0.72226
|
|
3167 HMM A C G T
|
|
3168 m->m m->i m->d i->m i->i d->m d->d
|
|
3169 COMPO 1.60546 1.22177 1.71091 1.12765
|
|
3170 1.38629 1.38629 1.38629 1.38629
|
|
3171 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
3172 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
3173 1.38629 1.38629 1.38629 1.38629
|
|
3174 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3175 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
|
|
3176 1.38629 1.38629 1.38629 1.38629
|
|
3177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3178 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
|
|
3179 1.38629 1.38629 1.38629 1.38629
|
|
3180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3181 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
|
|
3182 1.38629 1.38629 1.38629 1.38629
|
|
3183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3184 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
3185 1.38629 1.38629 1.38629 1.38629
|
|
3186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3187 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
|
|
3188 1.38629 1.38629 1.38629 1.38629
|
|
3189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3190 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
|
|
3191 1.38629 1.38629 1.38629 1.38629
|
|
3192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3193 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
|
|
3194 1.38629 1.38629 1.38629 1.38629
|
|
3195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3196 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
3197 1.38629 1.38629 1.38629 1.38629
|
|
3198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3199 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
|
|
3200 1.38629 1.38629 1.38629 1.38629
|
|
3201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3202 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
|
|
3203 1.38629 1.38629 1.38629 1.38629
|
|
3204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3205 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
|
|
3206 1.38629 1.38629 1.38629 1.38629
|
|
3207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3208 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
|
|
3209 1.38629 1.38629 1.38629 1.38629
|
|
3210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3211 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
3212 1.38629 1.38629 1.38629 1.38629
|
|
3213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3214 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
|
|
3215 1.38629 1.38629 1.38629 1.38629
|
|
3216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3217 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
|
|
3218 1.38629 1.38629 1.38629 1.38629
|
|
3219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3220 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
3221 1.38629 1.38629 1.38629 1.38629
|
|
3222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3223 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
|
|
3224 1.38629 1.38629 1.38629 1.38629
|
|
3225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3226 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
3227 1.38629 1.38629 1.38629 1.38629
|
|
3228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3229 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
|
|
3230 1.38629 1.38629 1.38629 1.38629
|
|
3231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3232 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
3233 1.38629 1.38629 1.38629 1.38629
|
|
3234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3235 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
|
|
3236 1.38629 1.38629 1.38629 1.38629
|
|
3237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3238 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
|
|
3239 1.38629 1.38629 1.38629 1.38629
|
|
3240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3241 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
|
|
3242 1.38629 1.38629 1.38629 1.38629
|
|
3243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3244 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
|
|
3245 1.38629 1.38629 1.38629 1.38629
|
|
3246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3247 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
|
|
3248 1.38629 1.38629 1.38629 1.38629
|
|
3249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3250 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
3251 1.38629 1.38629 1.38629 1.38629
|
|
3252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3253 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
|
|
3254 1.38629 1.38629 1.38629 1.38629
|
|
3255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3256 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
|
|
3257 1.38629 1.38629 1.38629 1.38629
|
|
3258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3259 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
|
|
3260 1.38629 1.38629 1.38629 1.38629
|
|
3261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3262 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
3263 1.38629 1.38629 1.38629 1.38629
|
|
3264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3265 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
|
|
3266 1.38629 1.38629 1.38629 1.38629
|
|
3267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3268 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
3269 1.38629 1.38629 1.38629 1.38629
|
|
3270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3271 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
|
|
3272 1.38629 1.38629 1.38629 1.38629
|
|
3273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3274 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
3275 1.38629 1.38629 1.38629 1.38629
|
|
3276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3277 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
|
|
3278 1.38629 1.38629 1.38629 1.38629
|
|
3279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3280 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
3281 1.38629 1.38629 1.38629 1.38629
|
|
3282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3283 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
|
|
3284 1.38629 1.38629 1.38629 1.38629
|
|
3285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3286 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
3287 1.38629 1.38629 1.38629 1.38629
|
|
3288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3289 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
|
|
3290 1.38629 1.38629 1.38629 1.38629
|
|
3291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3292 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
3293 1.38629 1.38629 1.38629 1.38629
|
|
3294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3295 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
|
|
3296 1.38629 1.38629 1.38629 1.38629
|
|
3297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3298 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
3299 1.38629 1.38629 1.38629 1.38629
|
|
3300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3301 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
|
|
3302 1.38629 1.38629 1.38629 1.38629
|
|
3303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3304 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
|
|
3305 1.38629 1.38629 1.38629 1.38629
|
|
3306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3307 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
|
|
3308 1.38629 1.38629 1.38629 1.38629
|
|
3309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3310 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
|
|
3311 1.38629 1.38629 1.38629 1.38629
|
|
3312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3313 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
|
|
3314 1.38629 1.38629 1.38629 1.38629
|
|
3315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3316 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
|
|
3317 1.38629 1.38629 1.38629 1.38629
|
|
3318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3319 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
|
|
3320 1.38629 1.38629 1.38629 1.38629
|
|
3321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3322 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
|
|
3323 1.38629 1.38629 1.38629 1.38629
|
|
3324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3325 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
3326 1.38629 1.38629 1.38629 1.38629
|
|
3327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3328 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
|
|
3329 1.38629 1.38629 1.38629 1.38629
|
|
3330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3331 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
|
|
3332 1.38629 1.38629 1.38629 1.38629
|
|
3333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3334 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
|
|
3335 1.38629 1.38629 1.38629 1.38629
|
|
3336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3337 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
3338 1.38629 1.38629 1.38629 1.38629
|
|
3339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3340 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
|
|
3341 1.38629 1.38629 1.38629 1.38629
|
|
3342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3343 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
|
|
3344 1.38629 1.38629 1.38629 1.38629
|
|
3345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3346 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
|
|
3347 1.38629 1.38629 1.38629 1.38629
|
|
3348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3349 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
|
|
3350 1.38629 1.38629 1.38629 1.38629
|
|
3351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3352 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
3353 1.38629 1.38629 1.38629 1.38629
|
|
3354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3355 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
|
|
3356 1.38629 1.38629 1.38629 1.38629
|
|
3357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3358 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
|
|
3359 1.38629 1.38629 1.38629 1.38629
|
|
3360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3361 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
3362 1.38629 1.38629 1.38629 1.38629
|
|
3363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3364 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
3365 1.38629 1.38629 1.38629 1.38629
|
|
3366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3367 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
3368 1.38629 1.38629 1.38629 1.38629
|
|
3369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3370 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
3371 1.38629 1.38629 1.38629 1.38629
|
|
3372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3373 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
|
|
3374 1.38629 1.38629 1.38629 1.38629
|
|
3375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3376 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
|
|
3377 1.38629 1.38629 1.38629 1.38629
|
|
3378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3379 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
3380 1.38629 1.38629 1.38629 1.38629
|
|
3381 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
3382 //
|
|
3383 HMMER3/f [3.2.1 | June 2018]
|
|
3384 NAME long.14.aln
|
|
3385 LENG 70
|
|
3386 MAXL 160
|
|
3387 ALPH DNA
|
|
3388 RF no
|
|
3389 MM no
|
|
3390 CONS yes
|
|
3391 CS no
|
|
3392 MAP yes
|
|
3393 DATE Tue May 28 13:12:02 2019
|
|
3394 NSEQ 2
|
|
3395 EFFN 2.000000
|
|
3396 CKSUM 1031720992
|
|
3397 STATS LOCAL MSV -8.3941 0.72237
|
|
3398 STATS LOCAL VITERBI -9.1821 0.72237
|
|
3399 STATS LOCAL FORWARD -3.5771 0.72237
|
|
3400 HMM A C G T
|
|
3401 m->m m->i m->d i->m i->i d->m d->d
|
|
3402 COMPO 1.44271 1.49503 1.75234 1.00484
|
|
3403 1.38629 1.38629 1.38629 1.38629
|
|
3404 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
3405 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
|
|
3406 1.38629 1.38629 1.38629 1.38629
|
|
3407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3408 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
|
|
3409 1.38629 1.38629 1.38629 1.38629
|
|
3410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3411 3 2.38910 2.82844 0.25233 2.62837 3 g - - -
|
|
3412 1.38629 1.38629 1.38629 1.38629
|
|
3413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3414 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
|
|
3415 1.38629 1.38629 1.38629 1.38629
|
|
3416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3417 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
3418 1.38629 1.38629 1.38629 1.38629
|
|
3419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3420 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
3421 1.38629 1.38629 1.38629 1.38629
|
|
3422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3423 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
3424 1.38629 1.38629 1.38629 1.38629
|
|
3425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3426 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
|
|
3427 1.38629 1.38629 1.38629 1.38629
|
|
3428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3429 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
3430 1.38629 1.38629 1.38629 1.38629
|
|
3431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3432 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
|
|
3433 1.38629 1.38629 1.38629 1.38629
|
|
3434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3435 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
3436 1.38629 1.38629 1.38629 1.38629
|
|
3437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3438 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
|
|
3439 1.38629 1.38629 1.38629 1.38629
|
|
3440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3441 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
|
|
3442 1.38629 1.38629 1.38629 1.38629
|
|
3443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3444 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
|
|
3445 1.38629 1.38629 1.38629 1.38629
|
|
3446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3447 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
3448 1.38629 1.38629 1.38629 1.38629
|
|
3449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3450 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
3451 1.38629 1.38629 1.38629 1.38629
|
|
3452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3453 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
3454 1.38629 1.38629 1.38629 1.38629
|
|
3455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3456 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
|
|
3457 1.38629 1.38629 1.38629 1.38629
|
|
3458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3459 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
3460 1.38629 1.38629 1.38629 1.38629
|
|
3461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3462 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
3463 1.38629 1.38629 1.38629 1.38629
|
|
3464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3465 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
|
|
3466 1.38629 1.38629 1.38629 1.38629
|
|
3467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3468 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
|
|
3469 1.38629 1.38629 1.38629 1.38629
|
|
3470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3471 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
3472 1.38629 1.38629 1.38629 1.38629
|
|
3473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3474 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
3475 1.38629 1.38629 1.38629 1.38629
|
|
3476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3477 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
|
|
3478 1.38629 1.38629 1.38629 1.38629
|
|
3479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3480 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
|
|
3481 1.38629 1.38629 1.38629 1.38629
|
|
3482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3483 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
3484 1.38629 1.38629 1.38629 1.38629
|
|
3485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3486 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
|
|
3487 1.38629 1.38629 1.38629 1.38629
|
|
3488 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3489 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
3490 1.38629 1.38629 1.38629 1.38629
|
|
3491 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3492 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
|
|
3493 1.38629 1.38629 1.38629 1.38629
|
|
3494 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3495 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
3496 1.38629 1.38629 1.38629 1.38629
|
|
3497 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3498 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
3499 1.38629 1.38629 1.38629 1.38629
|
|
3500 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3501 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
|
|
3502 1.38629 1.38629 1.38629 1.38629
|
|
3503 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3504 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
3505 1.38629 1.38629 1.38629 1.38629
|
|
3506 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3507 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
3508 1.38629 1.38629 1.38629 1.38629
|
|
3509 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3510 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
|
|
3511 1.38629 1.38629 1.38629 1.38629
|
|
3512 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3513 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
|
|
3514 1.38629 1.38629 1.38629 1.38629
|
|
3515 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3516 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
|
|
3517 1.38629 1.38629 1.38629 1.38629
|
|
3518 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3519 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
|
|
3520 1.38629 1.38629 1.38629 1.38629
|
|
3521 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3522 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
3523 1.38629 1.38629 1.38629 1.38629
|
|
3524 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3525 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
3526 1.38629 1.38629 1.38629 1.38629
|
|
3527 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3528 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
3529 1.38629 1.38629 1.38629 1.38629
|
|
3530 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3531 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
|
|
3532 1.38629 1.38629 1.38629 1.38629
|
|
3533 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3534 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
3535 1.38629 1.38629 1.38629 1.38629
|
|
3536 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3537 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
3538 1.38629 1.38629 1.38629 1.38629
|
|
3539 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3540 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
3541 1.38629 1.38629 1.38629 1.38629
|
|
3542 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3543 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
3544 1.38629 1.38629 1.38629 1.38629
|
|
3545 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3546 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
|
|
3547 1.38629 1.38629 1.38629 1.38629
|
|
3548 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3549 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
|
|
3550 1.38629 1.38629 1.38629 1.38629
|
|
3551 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3552 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
3553 1.38629 1.38629 1.38629 1.38629
|
|
3554 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3555 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
3556 1.38629 1.38629 1.38629 1.38629
|
|
3557 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3558 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
|
|
3559 1.38629 1.38629 1.38629 1.38629
|
|
3560 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3561 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
|
|
3562 1.38629 1.38629 1.38629 1.38629
|
|
3563 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3564 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
3565 1.38629 1.38629 1.38629 1.38629
|
|
3566 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3567 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
3568 1.38629 1.38629 1.38629 1.38629
|
|
3569 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3570 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
3571 1.38629 1.38629 1.38629 1.38629
|
|
3572 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3573 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
|
|
3574 1.38629 1.38629 1.38629 1.38629
|
|
3575 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3576 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
|
|
3577 1.38629 1.38629 1.38629 1.38629
|
|
3578 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3579 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
3580 1.38629 1.38629 1.38629 1.38629
|
|
3581 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3582 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
|
|
3583 1.38629 1.38629 1.38629 1.38629
|
|
3584 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3585 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
3586 1.38629 1.38629 1.38629 1.38629
|
|
3587 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3588 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
|
|
3589 1.38629 1.38629 1.38629 1.38629
|
|
3590 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3591 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
|
|
3592 1.38629 1.38629 1.38629 1.38629
|
|
3593 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3594 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
3595 1.38629 1.38629 1.38629 1.38629
|
|
3596 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3597 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
|
|
3598 1.38629 1.38629 1.38629 1.38629
|
|
3599 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3600 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
3601 1.38629 1.38629 1.38629 1.38629
|
|
3602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3603 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
3604 1.38629 1.38629 1.38629 1.38629
|
|
3605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3606 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
|
|
3607 1.38629 1.38629 1.38629 1.38629
|
|
3608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3609 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
|
|
3610 1.38629 1.38629 1.38629 1.38629
|
|
3611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3612 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
3613 1.38629 1.38629 1.38629 1.38629
|
|
3614 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
3615 //
|
|
3616 HMMER3/f [3.2.1 | June 2018]
|
|
3617 NAME long.15.aln
|
|
3618 LENG 70
|
|
3619 MAXL 160
|
|
3620 ALPH DNA
|
|
3621 RF no
|
|
3622 MM no
|
|
3623 CONS yes
|
|
3624 CS no
|
|
3625 MAP yes
|
|
3626 DATE Tue May 28 13:12:02 2019
|
|
3627 NSEQ 2
|
|
3628 EFFN 2.000000
|
|
3629 CKSUM 503286853
|
|
3630 STATS LOCAL MSV -8.0267 0.72173
|
|
3631 STATS LOCAL VITERBI -9.2116 0.72173
|
|
3632 STATS LOCAL FORWARD -3.7261 0.72173
|
|
3633 HMM A C G T
|
|
3634 m->m m->i m->d i->m i->i d->m d->d
|
|
3635 COMPO 1.60915 1.17831 1.57427 1.25532
|
|
3636 1.38629 1.38629 1.38629 1.38629
|
|
3637 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
3638 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
|
|
3639 1.38629 1.38629 1.38629 1.38629
|
|
3640 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3641 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
|
|
3642 1.38629 1.38629 1.38629 1.38629
|
|
3643 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3644 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
|
|
3645 1.38629 1.38629 1.38629 1.38629
|
|
3646 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3647 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
|
|
3648 1.38629 1.38629 1.38629 1.38629
|
|
3649 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3650 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
|
|
3651 1.38629 1.38629 1.38629 1.38629
|
|
3652 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3653 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
3654 1.38629 1.38629 1.38629 1.38629
|
|
3655 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3656 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
|
|
3657 1.38629 1.38629 1.38629 1.38629
|
|
3658 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3659 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
|
|
3660 1.38629 1.38629 1.38629 1.38629
|
|
3661 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3662 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
|
|
3663 1.38629 1.38629 1.38629 1.38629
|
|
3664 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3665 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
3666 1.38629 1.38629 1.38629 1.38629
|
|
3667 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3668 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
|
|
3669 1.38629 1.38629 1.38629 1.38629
|
|
3670 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3671 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
|
|
3672 1.38629 1.38629 1.38629 1.38629
|
|
3673 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3674 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
|
|
3675 1.38629 1.38629 1.38629 1.38629
|
|
3676 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3677 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
3678 1.38629 1.38629 1.38629 1.38629
|
|
3679 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3680 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
3681 1.38629 1.38629 1.38629 1.38629
|
|
3682 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3683 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
|
|
3684 1.38629 1.38629 1.38629 1.38629
|
|
3685 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3686 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
|
|
3687 1.38629 1.38629 1.38629 1.38629
|
|
3688 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3689 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
3690 1.38629 1.38629 1.38629 1.38629
|
|
3691 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3692 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
3693 1.38629 1.38629 1.38629 1.38629
|
|
3694 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3695 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
|
|
3696 1.38629 1.38629 1.38629 1.38629
|
|
3697 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3698 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
|
|
3699 1.38629 1.38629 1.38629 1.38629
|
|
3700 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3701 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
|
|
3702 1.38629 1.38629 1.38629 1.38629
|
|
3703 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3704 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
|
|
3705 1.38629 1.38629 1.38629 1.38629
|
|
3706 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3707 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
|
|
3708 1.38629 1.38629 1.38629 1.38629
|
|
3709 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3710 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
|
|
3711 1.38629 1.38629 1.38629 1.38629
|
|
3712 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3713 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
|
|
3714 1.38629 1.38629 1.38629 1.38629
|
|
3715 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3716 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
|
|
3717 1.38629 1.38629 1.38629 1.38629
|
|
3718 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3719 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
3720 1.38629 1.38629 1.38629 1.38629
|
|
3721 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3722 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
3723 1.38629 1.38629 1.38629 1.38629
|
|
3724 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3725 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
|
|
3726 1.38629 1.38629 1.38629 1.38629
|
|
3727 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3728 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
|
|
3729 1.38629 1.38629 1.38629 1.38629
|
|
3730 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3731 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
|
|
3732 1.38629 1.38629 1.38629 1.38629
|
|
3733 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3734 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
3735 1.38629 1.38629 1.38629 1.38629
|
|
3736 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3737 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
|
|
3738 1.38629 1.38629 1.38629 1.38629
|
|
3739 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3740 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
|
|
3741 1.38629 1.38629 1.38629 1.38629
|
|
3742 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3743 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
3744 1.38629 1.38629 1.38629 1.38629
|
|
3745 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3746 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
|
|
3747 1.38629 1.38629 1.38629 1.38629
|
|
3748 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3749 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
3750 1.38629 1.38629 1.38629 1.38629
|
|
3751 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3752 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
|
|
3753 1.38629 1.38629 1.38629 1.38629
|
|
3754 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3755 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
3756 1.38629 1.38629 1.38629 1.38629
|
|
3757 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3758 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
3759 1.38629 1.38629 1.38629 1.38629
|
|
3760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3761 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
|
|
3762 1.38629 1.38629 1.38629 1.38629
|
|
3763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3764 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
|
|
3765 1.38629 1.38629 1.38629 1.38629
|
|
3766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3767 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
3768 1.38629 1.38629 1.38629 1.38629
|
|
3769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3770 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
|
|
3771 1.38629 1.38629 1.38629 1.38629
|
|
3772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3773 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
3774 1.38629 1.38629 1.38629 1.38629
|
|
3775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3776 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
|
|
3777 1.38629 1.38629 1.38629 1.38629
|
|
3778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3779 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
|
|
3780 1.38629 1.38629 1.38629 1.38629
|
|
3781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3782 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
|
|
3783 1.38629 1.38629 1.38629 1.38629
|
|
3784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3785 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
3786 1.38629 1.38629 1.38629 1.38629
|
|
3787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3788 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
3789 1.38629 1.38629 1.38629 1.38629
|
|
3790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3791 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
3792 1.38629 1.38629 1.38629 1.38629
|
|
3793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3794 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
|
|
3795 1.38629 1.38629 1.38629 1.38629
|
|
3796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3797 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
3798 1.38629 1.38629 1.38629 1.38629
|
|
3799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3800 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
|
|
3801 1.38629 1.38629 1.38629 1.38629
|
|
3802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3803 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
3804 1.38629 1.38629 1.38629 1.38629
|
|
3805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3806 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
|
|
3807 1.38629 1.38629 1.38629 1.38629
|
|
3808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3809 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
|
|
3810 1.38629 1.38629 1.38629 1.38629
|
|
3811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3812 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
|
|
3813 1.38629 1.38629 1.38629 1.38629
|
|
3814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3815 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
|
|
3816 1.38629 1.38629 1.38629 1.38629
|
|
3817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3818 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
|
|
3819 1.38629 1.38629 1.38629 1.38629
|
|
3820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3821 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
3822 1.38629 1.38629 1.38629 1.38629
|
|
3823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3824 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
|
|
3825 1.38629 1.38629 1.38629 1.38629
|
|
3826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3827 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
3828 1.38629 1.38629 1.38629 1.38629
|
|
3829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3830 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
|
|
3831 1.38629 1.38629 1.38629 1.38629
|
|
3832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3833 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
|
|
3834 1.38629 1.38629 1.38629 1.38629
|
|
3835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3836 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
|
|
3837 1.38629 1.38629 1.38629 1.38629
|
|
3838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3839 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
|
|
3840 1.38629 1.38629 1.38629 1.38629
|
|
3841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3842 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
|
|
3843 1.38629 1.38629 1.38629 1.38629
|
|
3844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3845 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
|
|
3846 1.38629 1.38629 1.38629 1.38629
|
|
3847 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
3848 //
|
|
3849 HMMER3/f [3.2.1 | June 2018]
|
|
3850 NAME long.16.aln
|
|
3851 LENG 70
|
|
3852 MAXL 160
|
|
3853 ALPH DNA
|
|
3854 RF no
|
|
3855 MM no
|
|
3856 CONS yes
|
|
3857 CS no
|
|
3858 MAP yes
|
|
3859 DATE Tue May 28 13:12:02 2019
|
|
3860 NSEQ 2
|
|
3861 EFFN 2.000000
|
|
3862 CKSUM 3834571115
|
|
3863 STATS LOCAL MSV -8.2739 0.72217
|
|
3864 STATS LOCAL VITERBI -9.2034 0.72217
|
|
3865 STATS LOCAL FORWARD -3.3554 0.72217
|
|
3866 HMM A C G T
|
|
3867 m->m m->i m->d i->m i->i d->m d->d
|
|
3868 COMPO 1.28694 1.39659 1.54629 1.33404
|
|
3869 1.38629 1.38629 1.38629 1.38629
|
|
3870 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
3871 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
|
|
3872 1.38629 1.38629 1.38629 1.38629
|
|
3873 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3874 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
|
|
3875 1.38629 1.38629 1.38629 1.38629
|
|
3876 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3877 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
|
|
3878 1.38629 1.38629 1.38629 1.38629
|
|
3879 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3880 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
|
|
3881 1.38629 1.38629 1.38629 1.38629
|
|
3882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3883 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
|
|
3884 1.38629 1.38629 1.38629 1.38629
|
|
3885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3886 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
|
|
3887 1.38629 1.38629 1.38629 1.38629
|
|
3888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3889 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
|
|
3890 1.38629 1.38629 1.38629 1.38629
|
|
3891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3892 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
|
|
3893 1.38629 1.38629 1.38629 1.38629
|
|
3894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3895 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
3896 1.38629 1.38629 1.38629 1.38629
|
|
3897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3898 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
3899 1.38629 1.38629 1.38629 1.38629
|
|
3900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3901 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
|
|
3902 1.38629 1.38629 1.38629 1.38629
|
|
3903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3904 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
3905 1.38629 1.38629 1.38629 1.38629
|
|
3906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3907 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
3908 1.38629 1.38629 1.38629 1.38629
|
|
3909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3910 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
3911 1.38629 1.38629 1.38629 1.38629
|
|
3912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3913 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
|
|
3914 1.38629 1.38629 1.38629 1.38629
|
|
3915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3916 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
|
|
3917 1.38629 1.38629 1.38629 1.38629
|
|
3918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3919 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
|
|
3920 1.38629 1.38629 1.38629 1.38629
|
|
3921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3922 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
|
|
3923 1.38629 1.38629 1.38629 1.38629
|
|
3924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3925 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
3926 1.38629 1.38629 1.38629 1.38629
|
|
3927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3928 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
|
|
3929 1.38629 1.38629 1.38629 1.38629
|
|
3930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3931 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
|
|
3932 1.38629 1.38629 1.38629 1.38629
|
|
3933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3934 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
3935 1.38629 1.38629 1.38629 1.38629
|
|
3936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3937 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
|
|
3938 1.38629 1.38629 1.38629 1.38629
|
|
3939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3940 24 1.08498 1.08670 1.94700 1.70340 24 a - - -
|
|
3941 1.38629 1.38629 1.38629 1.38629
|
|
3942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3943 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
|
|
3944 1.38629 1.38629 1.38629 1.38629
|
|
3945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3946 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
3947 1.38629 1.38629 1.38629 1.38629
|
|
3948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3949 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
3950 1.38629 1.38629 1.38629 1.38629
|
|
3951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3952 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
|
|
3953 1.38629 1.38629 1.38629 1.38629
|
|
3954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3955 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
|
|
3956 1.38629 1.38629 1.38629 1.38629
|
|
3957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3958 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
|
|
3959 1.38629 1.38629 1.38629 1.38629
|
|
3960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3961 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
|
|
3962 1.38629 1.38629 1.38629 1.38629
|
|
3963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3964 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
|
|
3965 1.38629 1.38629 1.38629 1.38629
|
|
3966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3967 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
3968 1.38629 1.38629 1.38629 1.38629
|
|
3969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3970 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
|
|
3971 1.38629 1.38629 1.38629 1.38629
|
|
3972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3973 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
3974 1.38629 1.38629 1.38629 1.38629
|
|
3975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3976 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
|
|
3977 1.38629 1.38629 1.38629 1.38629
|
|
3978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3979 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
|
|
3980 1.38629 1.38629 1.38629 1.38629
|
|
3981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3982 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
3983 1.38629 1.38629 1.38629 1.38629
|
|
3984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3985 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
3986 1.38629 1.38629 1.38629 1.38629
|
|
3987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3988 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
3989 1.38629 1.38629 1.38629 1.38629
|
|
3990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3991 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
|
|
3992 1.38629 1.38629 1.38629 1.38629
|
|
3993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3994 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
3995 1.38629 1.38629 1.38629 1.38629
|
|
3996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3997 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
3998 1.38629 1.38629 1.38629 1.38629
|
|
3999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4000 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
4001 1.38629 1.38629 1.38629 1.38629
|
|
4002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4003 45 1.09289 1.89038 1.88803 1.01509 45 t - - -
|
|
4004 1.38629 1.38629 1.38629 1.38629
|
|
4005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4006 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
4007 1.38629 1.38629 1.38629 1.38629
|
|
4008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4009 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
|
|
4010 1.38629 1.38629 1.38629 1.38629
|
|
4011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4012 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
|
|
4013 1.38629 1.38629 1.38629 1.38629
|
|
4014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4015 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
|
|
4016 1.38629 1.38629 1.38629 1.38629
|
|
4017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4018 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
|
|
4019 1.38629 1.38629 1.38629 1.38629
|
|
4020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4021 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
|
|
4022 1.38629 1.38629 1.38629 1.38629
|
|
4023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4024 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
|
|
4025 1.38629 1.38629 1.38629 1.38629
|
|
4026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4027 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
|
|
4028 1.38629 1.38629 1.38629 1.38629
|
|
4029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4030 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
|
|
4031 1.38629 1.38629 1.38629 1.38629
|
|
4032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4033 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
|
|
4034 1.38629 1.38629 1.38629 1.38629
|
|
4035 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4036 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
|
|
4037 1.38629 1.38629 1.38629 1.38629
|
|
4038 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4039 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
|
|
4040 1.38629 1.38629 1.38629 1.38629
|
|
4041 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4042 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
|
|
4043 1.38629 1.38629 1.38629 1.38629
|
|
4044 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4045 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
|
|
4046 1.38629 1.38629 1.38629 1.38629
|
|
4047 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4048 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
|
|
4049 1.38629 1.38629 1.38629 1.38629
|
|
4050 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4051 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
|
|
4052 1.38629 1.38629 1.38629 1.38629
|
|
4053 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4054 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
4055 1.38629 1.38629 1.38629 1.38629
|
|
4056 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4057 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
|
|
4058 1.38629 1.38629 1.38629 1.38629
|
|
4059 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4060 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
|
|
4061 1.38629 1.38629 1.38629 1.38629
|
|
4062 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4063 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
4064 1.38629 1.38629 1.38629 1.38629
|
|
4065 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4066 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
4067 1.38629 1.38629 1.38629 1.38629
|
|
4068 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4069 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
4070 1.38629 1.38629 1.38629 1.38629
|
|
4071 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4072 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
|
|
4073 1.38629 1.38629 1.38629 1.38629
|
|
4074 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4075 69 1.88401 1.14290 1.03416 1.75097 69 g - - -
|
|
4076 1.38629 1.38629 1.38629 1.38629
|
|
4077 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4078 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
4079 1.38629 1.38629 1.38629 1.38629
|
|
4080 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
4081 //
|
|
4082 HMMER3/f [3.2.1 | June 2018]
|
|
4083 NAME long.17.aln
|
|
4084 LENG 70
|
|
4085 MAXL 160
|
|
4086 ALPH DNA
|
|
4087 RF no
|
|
4088 MM no
|
|
4089 CONS yes
|
|
4090 CS no
|
|
4091 MAP yes
|
|
4092 DATE Tue May 28 13:12:04 2019
|
|
4093 NSEQ 2
|
|
4094 EFFN 2.000000
|
|
4095 CKSUM 3997138551
|
|
4096 STATS LOCAL MSV -8.0960 0.71951
|
|
4097 STATS LOCAL VITERBI -9.1776 0.71951
|
|
4098 STATS LOCAL FORWARD -3.5659 0.71951
|
|
4099 HMM A C G T
|
|
4100 m->m m->i m->d i->m i->i d->m d->d
|
|
4101 COMPO 1.16459 1.99242 1.12093 1.48895
|
|
4102 1.38629 1.38629 1.38629 1.38629
|
|
4103 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
4104 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
|
|
4105 1.38629 1.38629 1.38629 1.38629
|
|
4106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4107 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
|
|
4108 1.38629 1.38629 1.38629 1.38629
|
|
4109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4110 3 2.38910 2.82844 0.25233 2.62837 3 g - - -
|
|
4111 1.38629 1.38629 1.38629 1.38629
|
|
4112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4113 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
|
|
4114 1.38629 1.38629 1.38629 1.38629
|
|
4115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4116 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
4117 1.38629 1.38629 1.38629 1.38629
|
|
4118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4119 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
4120 1.38629 1.38629 1.38629 1.38629
|
|
4121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4122 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
4123 1.38629 1.38629 1.38629 1.38629
|
|
4124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4125 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
|
|
4126 1.38629 1.38629 1.38629 1.38629
|
|
4127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4128 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
|
|
4129 1.38629 1.38629 1.38629 1.38629
|
|
4130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4131 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
|
|
4132 1.38629 1.38629 1.38629 1.38629
|
|
4133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4134 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
|
|
4135 1.38629 1.38629 1.38629 1.38629
|
|
4136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4137 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
4138 1.38629 1.38629 1.38629 1.38629
|
|
4139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4140 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
|
|
4141 1.38629 1.38629 1.38629 1.38629
|
|
4142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4143 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
|
|
4144 1.38629 1.38629 1.38629 1.38629
|
|
4145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4146 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
4147 1.38629 1.38629 1.38629 1.38629
|
|
4148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4149 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
|
|
4150 1.38629 1.38629 1.38629 1.38629
|
|
4151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4152 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
4153 1.38629 1.38629 1.38629 1.38629
|
|
4154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4155 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
|
|
4156 1.38629 1.38629 1.38629 1.38629
|
|
4157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4158 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
|
|
4159 1.38629 1.38629 1.38629 1.38629
|
|
4160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4161 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
4162 1.38629 1.38629 1.38629 1.38629
|
|
4163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4164 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
|
|
4165 1.38629 1.38629 1.38629 1.38629
|
|
4166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4167 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
|
|
4168 1.38629 1.38629 1.38629 1.38629
|
|
4169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4170 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
|
|
4171 1.38629 1.38629 1.38629 1.38629
|
|
4172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4173 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
4174 1.38629 1.38629 1.38629 1.38629
|
|
4175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4176 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
|
|
4177 1.38629 1.38629 1.38629 1.38629
|
|
4178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4179 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
|
|
4180 1.38629 1.38629 1.38629 1.38629
|
|
4181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4182 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
4183 1.38629 1.38629 1.38629 1.38629
|
|
4184 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4185 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
|
|
4186 1.38629 1.38629 1.38629 1.38629
|
|
4187 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4188 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
|
|
4189 1.38629 1.38629 1.38629 1.38629
|
|
4190 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4191 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
|
|
4192 1.38629 1.38629 1.38629 1.38629
|
|
4193 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4194 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
|
|
4195 1.38629 1.38629 1.38629 1.38629
|
|
4196 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4197 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
4198 1.38629 1.38629 1.38629 1.38629
|
|
4199 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4200 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
4201 1.38629 1.38629 1.38629 1.38629
|
|
4202 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4203 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
4204 1.38629 1.38629 1.38629 1.38629
|
|
4205 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4206 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
|
|
4207 1.38629 1.38629 1.38629 1.38629
|
|
4208 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4209 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
4210 1.38629 1.38629 1.38629 1.38629
|
|
4211 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4212 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
|
|
4213 1.38629 1.38629 1.38629 1.38629
|
|
4214 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4215 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
4216 1.38629 1.38629 1.38629 1.38629
|
|
4217 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4218 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
|
|
4219 1.38629 1.38629 1.38629 1.38629
|
|
4220 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4221 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
|
|
4222 1.38629 1.38629 1.38629 1.38629
|
|
4223 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4224 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
|
|
4225 1.38629 1.38629 1.38629 1.38629
|
|
4226 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4227 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
4228 1.38629 1.38629 1.38629 1.38629
|
|
4229 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4230 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
4231 1.38629 1.38629 1.38629 1.38629
|
|
4232 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4233 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
4234 1.38629 1.38629 1.38629 1.38629
|
|
4235 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4236 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
|
|
4237 1.38629 1.38629 1.38629 1.38629
|
|
4238 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4239 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
|
|
4240 1.38629 1.38629 1.38629 1.38629
|
|
4241 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4242 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
|
|
4243 1.38629 1.38629 1.38629 1.38629
|
|
4244 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4245 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
|
|
4246 1.38629 1.38629 1.38629 1.38629
|
|
4247 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4248 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
|
|
4249 1.38629 1.38629 1.38629 1.38629
|
|
4250 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4251 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
|
|
4252 1.38629 1.38629 1.38629 1.38629
|
|
4253 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4254 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
|
|
4255 1.38629 1.38629 1.38629 1.38629
|
|
4256 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4257 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
|
|
4258 1.38629 1.38629 1.38629 1.38629
|
|
4259 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4260 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
4261 1.38629 1.38629 1.38629 1.38629
|
|
4262 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4263 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
|
|
4264 1.38629 1.38629 1.38629 1.38629
|
|
4265 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4266 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
|
|
4267 1.38629 1.38629 1.38629 1.38629
|
|
4268 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4269 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
4270 1.38629 1.38629 1.38629 1.38629
|
|
4271 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4272 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
|
|
4273 1.38629 1.38629 1.38629 1.38629
|
|
4274 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4275 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
|
|
4276 1.38629 1.38629 1.38629 1.38629
|
|
4277 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4278 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
4279 1.38629 1.38629 1.38629 1.38629
|
|
4280 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4281 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
|
|
4282 1.38629 1.38629 1.38629 1.38629
|
|
4283 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4284 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
4285 1.38629 1.38629 1.38629 1.38629
|
|
4286 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4287 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
4288 1.38629 1.38629 1.38629 1.38629
|
|
4289 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4290 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
|
|
4291 1.38629 1.38629 1.38629 1.38629
|
|
4292 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4293 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
|
|
4294 1.38629 1.38629 1.38629 1.38629
|
|
4295 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4296 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
4297 1.38629 1.38629 1.38629 1.38629
|
|
4298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4299 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
4300 1.38629 1.38629 1.38629 1.38629
|
|
4301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4302 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
|
|
4303 1.38629 1.38629 1.38629 1.38629
|
|
4304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4305 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
|
|
4306 1.38629 1.38629 1.38629 1.38629
|
|
4307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4308 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
|
|
4309 1.38629 1.38629 1.38629 1.38629
|
|
4310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4311 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
|
|
4312 1.38629 1.38629 1.38629 1.38629
|
|
4313 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
4314 //
|
|
4315 HMMER3/f [3.2.1 | June 2018]
|
|
4316 NAME long.18.aln
|
|
4317 LENG 70
|
|
4318 MAXL 160
|
|
4319 ALPH DNA
|
|
4320 RF no
|
|
4321 MM no
|
|
4322 CONS yes
|
|
4323 CS no
|
|
4324 MAP yes
|
|
4325 DATE Tue May 28 13:12:04 2019
|
|
4326 NSEQ 2
|
|
4327 EFFN 2.000000
|
|
4328 CKSUM 3982440997
|
|
4329 STATS LOCAL MSV -8.2321 0.72111
|
|
4330 STATS LOCAL VITERBI -9.3642 0.72111
|
|
4331 STATS LOCAL FORWARD -3.8226 0.72111
|
|
4332 HMM A C G T
|
|
4333 m->m m->i m->d i->m i->i d->m d->d
|
|
4334 COMPO 1.52296 1.42201 1.37492 1.24533
|
|
4335 1.38629 1.38629 1.38629 1.38629
|
|
4336 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
4337 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
|
|
4338 1.38629 1.38629 1.38629 1.38629
|
|
4339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4340 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
|
|
4341 1.38629 1.38629 1.38629 1.38629
|
|
4342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4343 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
|
|
4344 1.38629 1.38629 1.38629 1.38629
|
|
4345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4346 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
|
|
4347 1.38629 1.38629 1.38629 1.38629
|
|
4348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4349 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
|
|
4350 1.38629 1.38629 1.38629 1.38629
|
|
4351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4352 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
4353 1.38629 1.38629 1.38629 1.38629
|
|
4354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4355 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
|
|
4356 1.38629 1.38629 1.38629 1.38629
|
|
4357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4358 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
|
|
4359 1.38629 1.38629 1.38629 1.38629
|
|
4360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4361 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
4362 1.38629 1.38629 1.38629 1.38629
|
|
4363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4364 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
|
|
4365 1.38629 1.38629 1.38629 1.38629
|
|
4366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4367 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
|
|
4368 1.38629 1.38629 1.38629 1.38629
|
|
4369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4370 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
|
|
4371 1.38629 1.38629 1.38629 1.38629
|
|
4372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4373 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
|
|
4374 1.38629 1.38629 1.38629 1.38629
|
|
4375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4376 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
|
|
4377 1.38629 1.38629 1.38629 1.38629
|
|
4378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4379 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
|
|
4380 1.38629 1.38629 1.38629 1.38629
|
|
4381 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4382 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
|
|
4383 1.38629 1.38629 1.38629 1.38629
|
|
4384 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4385 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
4386 1.38629 1.38629 1.38629 1.38629
|
|
4387 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4388 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
|
|
4389 1.38629 1.38629 1.38629 1.38629
|
|
4390 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4391 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
|
|
4392 1.38629 1.38629 1.38629 1.38629
|
|
4393 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4394 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
|
|
4395 1.38629 1.38629 1.38629 1.38629
|
|
4396 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4397 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
|
|
4398 1.38629 1.38629 1.38629 1.38629
|
|
4399 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4400 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
|
|
4401 1.38629 1.38629 1.38629 1.38629
|
|
4402 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4403 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
4404 1.38629 1.38629 1.38629 1.38629
|
|
4405 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4406 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
|
|
4407 1.38629 1.38629 1.38629 1.38629
|
|
4408 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4409 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
|
|
4410 1.38629 1.38629 1.38629 1.38629
|
|
4411 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4412 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
4413 1.38629 1.38629 1.38629 1.38629
|
|
4414 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4415 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
4416 1.38629 1.38629 1.38629 1.38629
|
|
4417 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4418 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
|
|
4419 1.38629 1.38629 1.38629 1.38629
|
|
4420 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4421 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
4422 1.38629 1.38629 1.38629 1.38629
|
|
4423 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4424 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
|
|
4425 1.38629 1.38629 1.38629 1.38629
|
|
4426 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4427 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
4428 1.38629 1.38629 1.38629 1.38629
|
|
4429 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4430 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
4431 1.38629 1.38629 1.38629 1.38629
|
|
4432 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4433 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
4434 1.38629 1.38629 1.38629 1.38629
|
|
4435 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4436 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
4437 1.38629 1.38629 1.38629 1.38629
|
|
4438 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4439 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
|
|
4440 1.38629 1.38629 1.38629 1.38629
|
|
4441 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4442 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
4443 1.38629 1.38629 1.38629 1.38629
|
|
4444 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4445 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
|
|
4446 1.38629 1.38629 1.38629 1.38629
|
|
4447 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4448 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
|
|
4449 1.38629 1.38629 1.38629 1.38629
|
|
4450 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4451 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
4452 1.38629 1.38629 1.38629 1.38629
|
|
4453 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4454 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
4455 1.38629 1.38629 1.38629 1.38629
|
|
4456 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4457 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
|
|
4458 1.38629 1.38629 1.38629 1.38629
|
|
4459 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4460 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
|
|
4461 1.38629 1.38629 1.38629 1.38629
|
|
4462 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4463 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
|
|
4464 1.38629 1.38629 1.38629 1.38629
|
|
4465 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4466 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
4467 1.38629 1.38629 1.38629 1.38629
|
|
4468 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4469 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
|
|
4470 1.38629 1.38629 1.38629 1.38629
|
|
4471 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4472 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
4473 1.38629 1.38629 1.38629 1.38629
|
|
4474 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4475 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
|
|
4476 1.38629 1.38629 1.38629 1.38629
|
|
4477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4478 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
|
|
4479 1.38629 1.38629 1.38629 1.38629
|
|
4480 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4481 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
|
|
4482 1.38629 1.38629 1.38629 1.38629
|
|
4483 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4484 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
4485 1.38629 1.38629 1.38629 1.38629
|
|
4486 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4487 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
4488 1.38629 1.38629 1.38629 1.38629
|
|
4489 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4490 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
|
|
4491 1.38629 1.38629 1.38629 1.38629
|
|
4492 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4493 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
4494 1.38629 1.38629 1.38629 1.38629
|
|
4495 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4496 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
|
|
4497 1.38629 1.38629 1.38629 1.38629
|
|
4498 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4499 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
|
|
4500 1.38629 1.38629 1.38629 1.38629
|
|
4501 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4502 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
4503 1.38629 1.38629 1.38629 1.38629
|
|
4504 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4505 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
|
|
4506 1.38629 1.38629 1.38629 1.38629
|
|
4507 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4508 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
4509 1.38629 1.38629 1.38629 1.38629
|
|
4510 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4511 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
|
|
4512 1.38629 1.38629 1.38629 1.38629
|
|
4513 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4514 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
|
|
4515 1.38629 1.38629 1.38629 1.38629
|
|
4516 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4517 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
4518 1.38629 1.38629 1.38629 1.38629
|
|
4519 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4520 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
|
|
4521 1.38629 1.38629 1.38629 1.38629
|
|
4522 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4523 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
4524 1.38629 1.38629 1.38629 1.38629
|
|
4525 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4526 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
|
|
4527 1.38629 1.38629 1.38629 1.38629
|
|
4528 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4529 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
|
|
4530 1.38629 1.38629 1.38629 1.38629
|
|
4531 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4532 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
4533 1.38629 1.38629 1.38629 1.38629
|
|
4534 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4535 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
4536 1.38629 1.38629 1.38629 1.38629
|
|
4537 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4538 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
|
|
4539 1.38629 1.38629 1.38629 1.38629
|
|
4540 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4541 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
|
|
4542 1.38629 1.38629 1.38629 1.38629
|
|
4543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4544 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
|
|
4545 1.38629 1.38629 1.38629 1.38629
|
|
4546 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
4547 //
|
|
4548 HMMER3/f [3.2.1 | June 2018]
|
|
4549 NAME long.19.aln
|
|
4550 LENG 70
|
|
4551 MAXL 160
|
|
4552 ALPH DNA
|
|
4553 RF no
|
|
4554 MM no
|
|
4555 CONS yes
|
|
4556 CS no
|
|
4557 MAP yes
|
|
4558 DATE Tue May 28 13:12:04 2019
|
|
4559 NSEQ 2
|
|
4560 EFFN 2.000000
|
|
4561 CKSUM 2532513137
|
|
4562 STATS LOCAL MSV -8.0066 0.72124
|
|
4563 STATS LOCAL VITERBI -9.2158 0.72124
|
|
4564 STATS LOCAL FORWARD -3.4919 0.72124
|
|
4565 HMM A C G T
|
|
4566 m->m m->i m->d i->m i->i d->m d->d
|
|
4567 COMPO 1.31433 1.38953 1.56917 1.29487
|
|
4568 1.38629 1.38629 1.38629 1.38629
|
|
4569 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
4570 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
|
|
4571 1.38629 1.38629 1.38629 1.38629
|
|
4572 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4573 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
|
|
4574 1.38629 1.38629 1.38629 1.38629
|
|
4575 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4576 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
|
|
4577 1.38629 1.38629 1.38629 1.38629
|
|
4578 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4579 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
|
|
4580 1.38629 1.38629 1.38629 1.38629
|
|
4581 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4582 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
|
|
4583 1.38629 1.38629 1.38629 1.38629
|
|
4584 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4585 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
4586 1.38629 1.38629 1.38629 1.38629
|
|
4587 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4588 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
4589 1.38629 1.38629 1.38629 1.38629
|
|
4590 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4591 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
|
|
4592 1.38629 1.38629 1.38629 1.38629
|
|
4593 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4594 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
|
|
4595 1.38629 1.38629 1.38629 1.38629
|
|
4596 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4597 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
4598 1.38629 1.38629 1.38629 1.38629
|
|
4599 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4600 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
4601 1.38629 1.38629 1.38629 1.38629
|
|
4602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4603 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
4604 1.38629 1.38629 1.38629 1.38629
|
|
4605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4606 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
|
|
4607 1.38629 1.38629 1.38629 1.38629
|
|
4608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4609 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
4610 1.38629 1.38629 1.38629 1.38629
|
|
4611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4612 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
|
|
4613 1.38629 1.38629 1.38629 1.38629
|
|
4614 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4615 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
4616 1.38629 1.38629 1.38629 1.38629
|
|
4617 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4618 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
4619 1.38629 1.38629 1.38629 1.38629
|
|
4620 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4621 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
4622 1.38629 1.38629 1.38629 1.38629
|
|
4623 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4624 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
|
|
4625 1.38629 1.38629 1.38629 1.38629
|
|
4626 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4627 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
|
|
4628 1.38629 1.38629 1.38629 1.38629
|
|
4629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4630 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
4631 1.38629 1.38629 1.38629 1.38629
|
|
4632 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4633 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
|
|
4634 1.38629 1.38629 1.38629 1.38629
|
|
4635 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4636 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
4637 1.38629 1.38629 1.38629 1.38629
|
|
4638 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4639 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
|
|
4640 1.38629 1.38629 1.38629 1.38629
|
|
4641 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4642 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
|
|
4643 1.38629 1.38629 1.38629 1.38629
|
|
4644 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4645 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
|
|
4646 1.38629 1.38629 1.38629 1.38629
|
|
4647 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4648 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
|
|
4649 1.38629 1.38629 1.38629 1.38629
|
|
4650 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4651 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
|
|
4652 1.38629 1.38629 1.38629 1.38629
|
|
4653 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4654 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
|
|
4655 1.38629 1.38629 1.38629 1.38629
|
|
4656 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4657 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
|
|
4658 1.38629 1.38629 1.38629 1.38629
|
|
4659 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4660 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
|
|
4661 1.38629 1.38629 1.38629 1.38629
|
|
4662 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4663 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
4664 1.38629 1.38629 1.38629 1.38629
|
|
4665 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4666 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
|
|
4667 1.38629 1.38629 1.38629 1.38629
|
|
4668 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4669 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
4670 1.38629 1.38629 1.38629 1.38629
|
|
4671 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4672 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
|
|
4673 1.38629 1.38629 1.38629 1.38629
|
|
4674 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4675 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
4676 1.38629 1.38629 1.38629 1.38629
|
|
4677 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4678 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
4679 1.38629 1.38629 1.38629 1.38629
|
|
4680 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4681 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
|
|
4682 1.38629 1.38629 1.38629 1.38629
|
|
4683 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4684 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
|
|
4685 1.38629 1.38629 1.38629 1.38629
|
|
4686 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4687 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
|
|
4688 1.38629 1.38629 1.38629 1.38629
|
|
4689 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4690 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
|
|
4691 1.38629 1.38629 1.38629 1.38629
|
|
4692 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4693 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
4694 1.38629 1.38629 1.38629 1.38629
|
|
4695 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4696 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
4697 1.38629 1.38629 1.38629 1.38629
|
|
4698 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4699 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
4700 1.38629 1.38629 1.38629 1.38629
|
|
4701 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4702 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
4703 1.38629 1.38629 1.38629 1.38629
|
|
4704 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4705 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
4706 1.38629 1.38629 1.38629 1.38629
|
|
4707 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4708 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
|
|
4709 1.38629 1.38629 1.38629 1.38629
|
|
4710 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4711 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
|
|
4712 1.38629 1.38629 1.38629 1.38629
|
|
4713 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4714 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
|
|
4715 1.38629 1.38629 1.38629 1.38629
|
|
4716 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4717 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
4718 1.38629 1.38629 1.38629 1.38629
|
|
4719 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4720 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
4721 1.38629 1.38629 1.38629 1.38629
|
|
4722 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4723 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
|
|
4724 1.38629 1.38629 1.38629 1.38629
|
|
4725 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4726 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
4727 1.38629 1.38629 1.38629 1.38629
|
|
4728 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4729 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
|
|
4730 1.38629 1.38629 1.38629 1.38629
|
|
4731 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4732 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
4733 1.38629 1.38629 1.38629 1.38629
|
|
4734 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4735 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
|
|
4736 1.38629 1.38629 1.38629 1.38629
|
|
4737 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4738 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
|
|
4739 1.38629 1.38629 1.38629 1.38629
|
|
4740 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4741 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
|
|
4742 1.38629 1.38629 1.38629 1.38629
|
|
4743 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4744 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
4745 1.38629 1.38629 1.38629 1.38629
|
|
4746 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4747 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
|
|
4748 1.38629 1.38629 1.38629 1.38629
|
|
4749 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4750 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
|
|
4751 1.38629 1.38629 1.38629 1.38629
|
|
4752 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4753 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
|
|
4754 1.38629 1.38629 1.38629 1.38629
|
|
4755 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4756 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
|
|
4757 1.38629 1.38629 1.38629 1.38629
|
|
4758 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4759 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
4760 1.38629 1.38629 1.38629 1.38629
|
|
4761 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4762 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
|
|
4763 1.38629 1.38629 1.38629 1.38629
|
|
4764 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4765 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
|
|
4766 1.38629 1.38629 1.38629 1.38629
|
|
4767 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4768 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
|
|
4769 1.38629 1.38629 1.38629 1.38629
|
|
4770 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4771 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
|
|
4772 1.38629 1.38629 1.38629 1.38629
|
|
4773 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4774 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
|
|
4775 1.38629 1.38629 1.38629 1.38629
|
|
4776 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4777 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
|
|
4778 1.38629 1.38629 1.38629 1.38629
|
|
4779 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
4780 //
|
|
4781 HMMER3/f [3.2.1 | June 2018]
|
|
4782 NAME long.20.aln
|
|
4783 LENG 76
|
|
4784 MAXL 168
|
|
4785 ALPH DNA
|
|
4786 RF no
|
|
4787 MM no
|
|
4788 CONS yes
|
|
4789 CS no
|
|
4790 MAP yes
|
|
4791 DATE Tue May 28 13:12:04 2019
|
|
4792 NSEQ 2
|
|
4793 EFFN 2.000000
|
|
4794 CKSUM 1469264720
|
|
4795 STATS LOCAL MSV -8.1344 0.72015
|
|
4796 STATS LOCAL VITERBI -9.5718 0.72015
|
|
4797 STATS LOCAL FORWARD -3.5802 0.72015
|
|
4798 HMM A C G T
|
|
4799 m->m m->i m->d i->m i->i d->m d->d
|
|
4800 COMPO 1.44381 1.42833 1.04375 1.75948
|
|
4801 1.38629 1.38629 1.38629 1.38629
|
|
4802 0.33647 3.73767 1.33977 1.46634 0.26236 0.00000 *
|
|
4803 1 1.97267 2.25870 0.46443 2.05625 1 g - - -
|
|
4804 1.38629 1.38629 1.38629 1.38629
|
|
4805 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
4806 2 1.97267 2.25870 0.46443 2.05625 2 g - - -
|
|
4807 1.38629 1.38629 1.38629 1.38629
|
|
4808 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
4809 3 0.56139 2.08489 1.86185 1.89791 3 a - - -
|
|
4810 1.38629 1.38629 1.38629 1.38629
|
|
4811 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
4812 4 0.56139 2.08489 1.86185 1.89791 4 a - - -
|
|
4813 1.38629 1.38629 1.38629 1.38629
|
|
4814 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
4815 5 0.56139 2.08489 1.86185 1.89791 5 a - - -
|
|
4816 1.38629 1.38629 1.38629 1.38629
|
|
4817 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
4818 6 1.98342 0.60779 2.04641 1.66785 6 c - - -
|
|
4819 1.38629 1.38629 1.38629 1.38629
|
|
4820 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
|
|
4821 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
|
|
4822 1.38629 1.38629 1.38629 1.38629
|
|
4823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4824 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
|
|
4825 1.38629 1.38629 1.38629 1.38629
|
|
4826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4827 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
|
|
4828 1.38629 1.38629 1.38629 1.38629
|
|
4829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4830 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
4831 1.38629 1.38629 1.38629 1.38629
|
|
4832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4833 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
|
|
4834 1.38629 1.38629 1.38629 1.38629
|
|
4835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4836 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
|
|
4837 1.38629 1.38629 1.38629 1.38629
|
|
4838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4839 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
|
|
4840 1.38629 1.38629 1.38629 1.38629
|
|
4841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4842 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
|
|
4843 1.38629 1.38629 1.38629 1.38629
|
|
4844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4845 15 1.88401 1.14290 1.03416 1.75097 15 g - - -
|
|
4846 1.38629 1.38629 1.38629 1.38629
|
|
4847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4848 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
|
|
4849 1.38629 1.38629 1.38629 1.38629
|
|
4850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4851 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
|
|
4852 1.38629 1.38629 1.38629 1.38629
|
|
4853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4854 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
4855 1.38629 1.38629 1.38629 1.38629
|
|
4856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4857 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
|
|
4858 1.38629 1.38629 1.38629 1.38629
|
|
4859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4860 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
4861 1.38629 1.38629 1.38629 1.38629
|
|
4862 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4863 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
|
|
4864 1.38629 1.38629 1.38629 1.38629
|
|
4865 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4866 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
|
|
4867 1.38629 1.38629 1.38629 1.38629
|
|
4868 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4869 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
4870 1.38629 1.38629 1.38629 1.38629
|
|
4871 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4872 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
|
|
4873 1.38629 1.38629 1.38629 1.38629
|
|
4874 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4875 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
|
|
4876 1.38629 1.38629 1.38629 1.38629
|
|
4877 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4878 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
|
|
4879 1.38629 1.38629 1.38629 1.38629
|
|
4880 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4881 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
4882 1.38629 1.38629 1.38629 1.38629
|
|
4883 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4884 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
|
|
4885 1.38629 1.38629 1.38629 1.38629
|
|
4886 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4887 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
|
|
4888 1.38629 1.38629 1.38629 1.38629
|
|
4889 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4890 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
|
|
4891 1.38629 1.38629 1.38629 1.38629
|
|
4892 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4893 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
|
|
4894 1.38629 1.38629 1.38629 1.38629
|
|
4895 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4896 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
4897 1.38629 1.38629 1.38629 1.38629
|
|
4898 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4899 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
|
|
4900 1.38629 1.38629 1.38629 1.38629
|
|
4901 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4902 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
|
|
4903 1.38629 1.38629 1.38629 1.38629
|
|
4904 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4905 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
|
|
4906 1.38629 1.38629 1.38629 1.38629
|
|
4907 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4908 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
|
|
4909 1.38629 1.38629 1.38629 1.38629
|
|
4910 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4911 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
4912 1.38629 1.38629 1.38629 1.38629
|
|
4913 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4914 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
4915 1.38629 1.38629 1.38629 1.38629
|
|
4916 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4917 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
|
|
4918 1.38629 1.38629 1.38629 1.38629
|
|
4919 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4920 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
|
|
4921 1.38629 1.38629 1.38629 1.38629
|
|
4922 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4923 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
4924 1.38629 1.38629 1.38629 1.38629
|
|
4925 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4926 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
|
|
4927 1.38629 1.38629 1.38629 1.38629
|
|
4928 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4929 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
4930 1.38629 1.38629 1.38629 1.38629
|
|
4931 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4932 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
|
|
4933 1.38629 1.38629 1.38629 1.38629
|
|
4934 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4935 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
|
|
4936 1.38629 1.38629 1.38629 1.38629
|
|
4937 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4938 46 1.88401 1.14290 1.03416 1.75097 46 g - - -
|
|
4939 1.38629 1.38629 1.38629 1.38629
|
|
4940 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4941 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
|
|
4942 1.38629 1.38629 1.38629 1.38629
|
|
4943 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4944 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
|
|
4945 1.38629 1.38629 1.38629 1.38629
|
|
4946 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4947 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
|
|
4948 1.38629 1.38629 1.38629 1.38629
|
|
4949 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4950 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
|
|
4951 1.38629 1.38629 1.38629 1.38629
|
|
4952 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4953 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
4954 1.38629 1.38629 1.38629 1.38629
|
|
4955 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4956 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
|
|
4957 1.38629 1.38629 1.38629 1.38629
|
|
4958 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4959 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
|
|
4960 1.38629 1.38629 1.38629 1.38629
|
|
4961 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4962 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
|
|
4963 1.38629 1.38629 1.38629 1.38629
|
|
4964 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4965 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
|
|
4966 1.38629 1.38629 1.38629 1.38629
|
|
4967 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4968 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
4969 1.38629 1.38629 1.38629 1.38629
|
|
4970 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4971 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
|
|
4972 1.38629 1.38629 1.38629 1.38629
|
|
4973 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4974 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
|
|
4975 1.38629 1.38629 1.38629 1.38629
|
|
4976 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4977 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
4978 1.38629 1.38629 1.38629 1.38629
|
|
4979 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4980 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
|
|
4981 1.38629 1.38629 1.38629 1.38629
|
|
4982 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4983 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
|
|
4984 1.38629 1.38629 1.38629 1.38629
|
|
4985 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4986 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
|
|
4987 1.38629 1.38629 1.38629 1.38629
|
|
4988 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4989 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
|
|
4990 1.38629 1.38629 1.38629 1.38629
|
|
4991 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4992 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
|
|
4993 1.38629 1.38629 1.38629 1.38629
|
|
4994 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4995 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
|
|
4996 1.38629 1.38629 1.38629 1.38629
|
|
4997 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4998 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
|
|
4999 1.38629 1.38629 1.38629 1.38629
|
|
5000 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5001 67 2.38910 2.82844 0.25233 2.62837 67 g - - -
|
|
5002 1.38629 1.38629 1.38629 1.38629
|
|
5003 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5004 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
|
|
5005 1.38629 1.38629 1.38629 1.38629
|
|
5006 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5007 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
|
|
5008 1.38629 1.38629 1.38629 1.38629
|
|
5009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5010 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
|
|
5011 1.38629 1.38629 1.38629 1.38629
|
|
5012 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
|
|
5013 71 1.97267 2.25870 0.46443 2.05625 71 g - - -
|
|
5014 1.38629 1.38629 1.38629 1.38629
|
|
5015 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
5016 72 1.98342 0.60779 2.04641 1.66785 72 c - - -
|
|
5017 1.38629 1.38629 1.38629 1.38629
|
|
5018 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
5019 73 1.97267 2.25870 0.46443 2.05625 73 g - - -
|
|
5020 1.38629 1.38629 1.38629 1.38629
|
|
5021 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
5022 74 0.56139 2.08489 1.86185 1.89791 74 a - - -
|
|
5023 1.38629 1.38629 1.38629 1.38629
|
|
5024 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
5025 75 1.98342 0.60779 2.04641 1.66785 75 c - - -
|
|
5026 1.38629 1.38629 1.38629 1.38629
|
|
5027 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
5028 76 1.91091 1.78233 1.95844 0.61114 76 t - - -
|
|
5029 1.38629 1.38629 1.38629 1.38629
|
|
5030 0.03279 3.43399 * 1.46634 0.26236 0.00000 *
|
|
5031 //
|
|
5032 HMMER3/f [3.2.1 | June 2018]
|
|
5033 NAME long.21.aln
|
|
5034 LENG 70
|
|
5035 MAXL 160
|
|
5036 ALPH DNA
|
|
5037 RF no
|
|
5038 MM no
|
|
5039 CONS yes
|
|
5040 CS no
|
|
5041 MAP yes
|
|
5042 DATE Tue May 28 13:12:04 2019
|
|
5043 NSEQ 2
|
|
5044 EFFN 2.000000
|
|
5045 CKSUM 3352386187
|
|
5046 STATS LOCAL MSV -7.8693 0.72000
|
|
5047 STATS LOCAL VITERBI -9.1844 0.72000
|
|
5048 STATS LOCAL FORWARD -3.3420 0.72000
|
|
5049 HMM A C G T
|
|
5050 m->m m->i m->d i->m i->i d->m d->d
|
|
5051 COMPO 1.25619 1.45164 1.27473 1.60162
|
|
5052 1.38629 1.38629 1.38629 1.38629
|
|
5053 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
5054 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
|
|
5055 1.38629 1.38629 1.38629 1.38629
|
|
5056 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5057 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
|
|
5058 1.38629 1.38629 1.38629 1.38629
|
|
5059 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5060 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
|
|
5061 1.38629 1.38629 1.38629 1.38629
|
|
5062 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5063 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
|
|
5064 1.38629 1.38629 1.38629 1.38629
|
|
5065 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5066 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
|
|
5067 1.38629 1.38629 1.38629 1.38629
|
|
5068 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5069 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
|
|
5070 1.38629 1.38629 1.38629 1.38629
|
|
5071 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5072 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
|
|
5073 1.38629 1.38629 1.38629 1.38629
|
|
5074 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5075 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
|
|
5076 1.38629 1.38629 1.38629 1.38629
|
|
5077 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5078 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
|
|
5079 1.38629 1.38629 1.38629 1.38629
|
|
5080 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5081 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
5082 1.38629 1.38629 1.38629 1.38629
|
|
5083 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5084 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
5085 1.38629 1.38629 1.38629 1.38629
|
|
5086 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5087 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
|
|
5088 1.38629 1.38629 1.38629 1.38629
|
|
5089 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5090 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
|
|
5091 1.38629 1.38629 1.38629 1.38629
|
|
5092 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5093 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
|
|
5094 1.38629 1.38629 1.38629 1.38629
|
|
5095 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5096 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
|
|
5097 1.38629 1.38629 1.38629 1.38629
|
|
5098 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5099 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
|
|
5100 1.38629 1.38629 1.38629 1.38629
|
|
5101 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5102 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
5103 1.38629 1.38629 1.38629 1.38629
|
|
5104 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5105 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
|
|
5106 1.38629 1.38629 1.38629 1.38629
|
|
5107 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5108 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
|
|
5109 1.38629 1.38629 1.38629 1.38629
|
|
5110 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5111 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
5112 1.38629 1.38629 1.38629 1.38629
|
|
5113 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5114 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
|
|
5115 1.38629 1.38629 1.38629 1.38629
|
|
5116 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5117 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
|
|
5118 1.38629 1.38629 1.38629 1.38629
|
|
5119 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5120 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
5121 1.38629 1.38629 1.38629 1.38629
|
|
5122 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5123 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
|
|
5124 1.38629 1.38629 1.38629 1.38629
|
|
5125 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5126 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
|
|
5127 1.38629 1.38629 1.38629 1.38629
|
|
5128 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5129 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
|
|
5130 1.38629 1.38629 1.38629 1.38629
|
|
5131 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5132 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
5133 1.38629 1.38629 1.38629 1.38629
|
|
5134 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5135 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
|
|
5136 1.38629 1.38629 1.38629 1.38629
|
|
5137 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5138 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
|
|
5139 1.38629 1.38629 1.38629 1.38629
|
|
5140 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5141 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
|
|
5142 1.38629 1.38629 1.38629 1.38629
|
|
5143 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5144 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
|
|
5145 1.38629 1.38629 1.38629 1.38629
|
|
5146 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5147 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
5148 1.38629 1.38629 1.38629 1.38629
|
|
5149 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5150 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
|
|
5151 1.38629 1.38629 1.38629 1.38629
|
|
5152 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5153 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
|
|
5154 1.38629 1.38629 1.38629 1.38629
|
|
5155 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5156 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
5157 1.38629 1.38629 1.38629 1.38629
|
|
5158 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5159 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
|
|
5160 1.38629 1.38629 1.38629 1.38629
|
|
5161 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5162 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
|
|
5163 1.38629 1.38629 1.38629 1.38629
|
|
5164 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5165 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
|
|
5166 1.38629 1.38629 1.38629 1.38629
|
|
5167 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5168 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
5169 1.38629 1.38629 1.38629 1.38629
|
|
5170 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5171 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
|
|
5172 1.38629 1.38629 1.38629 1.38629
|
|
5173 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5174 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
5175 1.38629 1.38629 1.38629 1.38629
|
|
5176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5177 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
|
|
5178 1.38629 1.38629 1.38629 1.38629
|
|
5179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5180 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
|
|
5181 1.38629 1.38629 1.38629 1.38629
|
|
5182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5183 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
|
|
5184 1.38629 1.38629 1.38629 1.38629
|
|
5185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5186 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
5187 1.38629 1.38629 1.38629 1.38629
|
|
5188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5189 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
|
|
5190 1.38629 1.38629 1.38629 1.38629
|
|
5191 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5192 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
|
|
5193 1.38629 1.38629 1.38629 1.38629
|
|
5194 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5195 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
|
|
5196 1.38629 1.38629 1.38629 1.38629
|
|
5197 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5198 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
|
|
5199 1.38629 1.38629 1.38629 1.38629
|
|
5200 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5201 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
|
|
5202 1.38629 1.38629 1.38629 1.38629
|
|
5203 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5204 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
|
|
5205 1.38629 1.38629 1.38629 1.38629
|
|
5206 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5207 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
|
|
5208 1.38629 1.38629 1.38629 1.38629
|
|
5209 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5210 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
|
|
5211 1.38629 1.38629 1.38629 1.38629
|
|
5212 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5213 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
5214 1.38629 1.38629 1.38629 1.38629
|
|
5215 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5216 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
5217 1.38629 1.38629 1.38629 1.38629
|
|
5218 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5219 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
5220 1.38629 1.38629 1.38629 1.38629
|
|
5221 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5222 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
|
|
5223 1.38629 1.38629 1.38629 1.38629
|
|
5224 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5225 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
|
|
5226 1.38629 1.38629 1.38629 1.38629
|
|
5227 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5228 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
5229 1.38629 1.38629 1.38629 1.38629
|
|
5230 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5231 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
|
|
5232 1.38629 1.38629 1.38629 1.38629
|
|
5233 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5234 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
|
|
5235 1.38629 1.38629 1.38629 1.38629
|
|
5236 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5237 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
5238 1.38629 1.38629 1.38629 1.38629
|
|
5239 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5240 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
5241 1.38629 1.38629 1.38629 1.38629
|
|
5242 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5243 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
5244 1.38629 1.38629 1.38629 1.38629
|
|
5245 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5246 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
5247 1.38629 1.38629 1.38629 1.38629
|
|
5248 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5249 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
|
|
5250 1.38629 1.38629 1.38629 1.38629
|
|
5251 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5252 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
|
|
5253 1.38629 1.38629 1.38629 1.38629
|
|
5254 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5255 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
|
|
5256 1.38629 1.38629 1.38629 1.38629
|
|
5257 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5258 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
|
|
5259 1.38629 1.38629 1.38629 1.38629
|
|
5260 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5261 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
|
|
5262 1.38629 1.38629 1.38629 1.38629
|
|
5263 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
5264 //
|
|
5265 HMMER3/f [3.2.1 | June 2018]
|
|
5266 NAME long.22.aln
|
|
5267 LENG 70
|
|
5268 MAXL 160
|
|
5269 ALPH DNA
|
|
5270 RF no
|
|
5271 MM no
|
|
5272 CONS yes
|
|
5273 CS no
|
|
5274 MAP yes
|
|
5275 DATE Tue May 28 13:12:03 2019
|
|
5276 NSEQ 2
|
|
5277 EFFN 2.000000
|
|
5278 CKSUM 3523423231
|
|
5279 STATS LOCAL MSV -7.9373 0.72115
|
|
5280 STATS LOCAL VITERBI -9.2441 0.72115
|
|
5281 STATS LOCAL FORWARD -3.3918 0.72115
|
|
5282 HMM A C G T
|
|
5283 m->m m->i m->d i->m i->i d->m d->d
|
|
5284 COMPO 1.22216 1.56504 1.56688 1.24607
|
|
5285 1.38629 1.38629 1.38629 1.38629
|
|
5286 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
5287 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
5288 1.38629 1.38629 1.38629 1.38629
|
|
5289 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5290 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
|
|
5291 1.38629 1.38629 1.38629 1.38629
|
|
5292 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5293 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
|
|
5294 1.38629 1.38629 1.38629 1.38629
|
|
5295 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5296 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
|
|
5297 1.38629 1.38629 1.38629 1.38629
|
|
5298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5299 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
|
|
5300 1.38629 1.38629 1.38629 1.38629
|
|
5301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5302 6 2.46232 0.33808 2.58153 2.07174 6 c - - -
|
|
5303 1.38629 1.38629 1.38629 1.38629
|
|
5304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5305 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
|
|
5306 1.38629 1.38629 1.38629 1.38629
|
|
5307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5308 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
|
|
5309 1.38629 1.38629 1.38629 1.38629
|
|
5310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5311 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
|
|
5312 1.38629 1.38629 1.38629 1.38629
|
|
5313 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5314 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
|
|
5315 1.38629 1.38629 1.38629 1.38629
|
|
5316 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5317 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
|
|
5318 1.38629 1.38629 1.38629 1.38629
|
|
5319 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5320 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
|
|
5321 1.38629 1.38629 1.38629 1.38629
|
|
5322 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5323 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
|
|
5324 1.38629 1.38629 1.38629 1.38629
|
|
5325 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5326 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
5327 1.38629 1.38629 1.38629 1.38629
|
|
5328 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5329 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
|
|
5330 1.38629 1.38629 1.38629 1.38629
|
|
5331 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5332 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
5333 1.38629 1.38629 1.38629 1.38629
|
|
5334 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5335 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
|
|
5336 1.38629 1.38629 1.38629 1.38629
|
|
5337 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5338 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
5339 1.38629 1.38629 1.38629 1.38629
|
|
5340 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5341 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
5342 1.38629 1.38629 1.38629 1.38629
|
|
5343 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5344 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
|
|
5345 1.38629 1.38629 1.38629 1.38629
|
|
5346 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5347 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
5348 1.38629 1.38629 1.38629 1.38629
|
|
5349 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5350 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
5351 1.38629 1.38629 1.38629 1.38629
|
|
5352 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5353 23 2.38910 2.82844 0.25233 2.62837 23 g - - -
|
|
5354 1.38629 1.38629 1.38629 1.38629
|
|
5355 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5356 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
5357 1.38629 1.38629 1.38629 1.38629
|
|
5358 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5359 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
5360 1.38629 1.38629 1.38629 1.38629
|
|
5361 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5362 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
5363 1.38629 1.38629 1.38629 1.38629
|
|
5364 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5365 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
5366 1.38629 1.38629 1.38629 1.38629
|
|
5367 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5368 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
|
|
5369 1.38629 1.38629 1.38629 1.38629
|
|
5370 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5371 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
|
|
5372 1.38629 1.38629 1.38629 1.38629
|
|
5373 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5374 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
|
|
5375 1.38629 1.38629 1.38629 1.38629
|
|
5376 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5377 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
|
|
5378 1.38629 1.38629 1.38629 1.38629
|
|
5379 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5380 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
|
|
5381 1.38629 1.38629 1.38629 1.38629
|
|
5382 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5383 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
|
|
5384 1.38629 1.38629 1.38629 1.38629
|
|
5385 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5386 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
|
|
5387 1.38629 1.38629 1.38629 1.38629
|
|
5388 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5389 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
5390 1.38629 1.38629 1.38629 1.38629
|
|
5391 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5392 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
|
|
5393 1.38629 1.38629 1.38629 1.38629
|
|
5394 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5395 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
5396 1.38629 1.38629 1.38629 1.38629
|
|
5397 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5398 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
|
|
5399 1.38629 1.38629 1.38629 1.38629
|
|
5400 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5401 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
|
|
5402 1.38629 1.38629 1.38629 1.38629
|
|
5403 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5404 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
5405 1.38629 1.38629 1.38629 1.38629
|
|
5406 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5407 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
|
|
5408 1.38629 1.38629 1.38629 1.38629
|
|
5409 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5410 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
|
|
5411 1.38629 1.38629 1.38629 1.38629
|
|
5412 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5413 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
5414 1.38629 1.38629 1.38629 1.38629
|
|
5415 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5416 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
5417 1.38629 1.38629 1.38629 1.38629
|
|
5418 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5419 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
|
|
5420 1.38629 1.38629 1.38629 1.38629
|
|
5421 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5422 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
5423 1.38629 1.38629 1.38629 1.38629
|
|
5424 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5425 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
5426 1.38629 1.38629 1.38629 1.38629
|
|
5427 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5428 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
|
|
5429 1.38629 1.38629 1.38629 1.38629
|
|
5430 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5431 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
|
|
5432 1.38629 1.38629 1.38629 1.38629
|
|
5433 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5434 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
|
|
5435 1.38629 1.38629 1.38629 1.38629
|
|
5436 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5437 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
5438 1.38629 1.38629 1.38629 1.38629
|
|
5439 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5440 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
5441 1.38629 1.38629 1.38629 1.38629
|
|
5442 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5443 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
|
|
5444 1.38629 1.38629 1.38629 1.38629
|
|
5445 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5446 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
|
|
5447 1.38629 1.38629 1.38629 1.38629
|
|
5448 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5449 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
|
|
5450 1.38629 1.38629 1.38629 1.38629
|
|
5451 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5452 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
5453 1.38629 1.38629 1.38629 1.38629
|
|
5454 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5455 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
|
|
5456 1.38629 1.38629 1.38629 1.38629
|
|
5457 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5458 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
|
|
5459 1.38629 1.38629 1.38629 1.38629
|
|
5460 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5461 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
5462 1.38629 1.38629 1.38629 1.38629
|
|
5463 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5464 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
|
|
5465 1.38629 1.38629 1.38629 1.38629
|
|
5466 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5467 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
5468 1.38629 1.38629 1.38629 1.38629
|
|
5469 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5470 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
5471 1.38629 1.38629 1.38629 1.38629
|
|
5472 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5473 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
5474 1.38629 1.38629 1.38629 1.38629
|
|
5475 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5476 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
5477 1.38629 1.38629 1.38629 1.38629
|
|
5478 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5479 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
5480 1.38629 1.38629 1.38629 1.38629
|
|
5481 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5482 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
|
|
5483 1.38629 1.38629 1.38629 1.38629
|
|
5484 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5485 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
5486 1.38629 1.38629 1.38629 1.38629
|
|
5487 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5488 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
|
|
5489 1.38629 1.38629 1.38629 1.38629
|
|
5490 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5491 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
5492 1.38629 1.38629 1.38629 1.38629
|
|
5493 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5494 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
|
|
5495 1.38629 1.38629 1.38629 1.38629
|
|
5496 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
5497 //
|
|
5498 HMMER3/f [3.2.1 | June 2018]
|
|
5499 NAME long.23.aln
|
|
5500 LENG 70
|
|
5501 MAXL 160
|
|
5502 ALPH DNA
|
|
5503 RF no
|
|
5504 MM no
|
|
5505 CONS yes
|
|
5506 CS no
|
|
5507 MAP yes
|
|
5508 DATE Tue May 28 13:12:04 2019
|
|
5509 NSEQ 2
|
|
5510 EFFN 2.000000
|
|
5511 CKSUM 3211019947
|
|
5512 STATS LOCAL MSV -7.9072 0.72056
|
|
5513 STATS LOCAL VITERBI -9.2220 0.72056
|
|
5514 STATS LOCAL FORWARD -3.4510 0.72056
|
|
5515 HMM A C G T
|
|
5516 m->m m->i m->d i->m i->i d->m d->d
|
|
5517 COMPO 1.08931 1.43968 1.56997 1.52098
|
|
5518 1.38629 1.38629 1.38629 1.38629
|
|
5519 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
5520 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
|
|
5521 1.38629 1.38629 1.38629 1.38629
|
|
5522 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5523 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
|
|
5524 1.38629 1.38629 1.38629 1.38629
|
|
5525 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5526 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
|
|
5527 1.38629 1.38629 1.38629 1.38629
|
|
5528 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5529 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
|
|
5530 1.38629 1.38629 1.38629 1.38629
|
|
5531 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5532 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
|
|
5533 1.38629 1.38629 1.38629 1.38629
|
|
5534 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5535 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
|
|
5536 1.38629 1.38629 1.38629 1.38629
|
|
5537 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5538 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
|
|
5539 1.38629 1.38629 1.38629 1.38629
|
|
5540 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5541 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
|
|
5542 1.38629 1.38629 1.38629 1.38629
|
|
5543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5544 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
|
|
5545 1.38629 1.38629 1.38629 1.38629
|
|
5546 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5547 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
5548 1.38629 1.38629 1.38629 1.38629
|
|
5549 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5550 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
|
|
5551 1.38629 1.38629 1.38629 1.38629
|
|
5552 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5553 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
|
|
5554 1.38629 1.38629 1.38629 1.38629
|
|
5555 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5556 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
|
|
5557 1.38629 1.38629 1.38629 1.38629
|
|
5558 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5559 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
|
|
5560 1.38629 1.38629 1.38629 1.38629
|
|
5561 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5562 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
|
|
5563 1.38629 1.38629 1.38629 1.38629
|
|
5564 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5565 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
|
|
5566 1.38629 1.38629 1.38629 1.38629
|
|
5567 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5568 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
|
|
5569 1.38629 1.38629 1.38629 1.38629
|
|
5570 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5571 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
5572 1.38629 1.38629 1.38629 1.38629
|
|
5573 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5574 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
5575 1.38629 1.38629 1.38629 1.38629
|
|
5576 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5577 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
|
|
5578 1.38629 1.38629 1.38629 1.38629
|
|
5579 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5580 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
5581 1.38629 1.38629 1.38629 1.38629
|
|
5582 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5583 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
|
|
5584 1.38629 1.38629 1.38629 1.38629
|
|
5585 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5586 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
5587 1.38629 1.38629 1.38629 1.38629
|
|
5588 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5589 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
5590 1.38629 1.38629 1.38629 1.38629
|
|
5591 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5592 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
5593 1.38629 1.38629 1.38629 1.38629
|
|
5594 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5595 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
|
|
5596 1.38629 1.38629 1.38629 1.38629
|
|
5597 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5598 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
|
|
5599 1.38629 1.38629 1.38629 1.38629
|
|
5600 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5601 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
|
|
5602 1.38629 1.38629 1.38629 1.38629
|
|
5603 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5604 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
5605 1.38629 1.38629 1.38629 1.38629
|
|
5606 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5607 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
|
|
5608 1.38629 1.38629 1.38629 1.38629
|
|
5609 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5610 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
|
|
5611 1.38629 1.38629 1.38629 1.38629
|
|
5612 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5613 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
5614 1.38629 1.38629 1.38629 1.38629
|
|
5615 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5616 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
|
|
5617 1.38629 1.38629 1.38629 1.38629
|
|
5618 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5619 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
5620 1.38629 1.38629 1.38629 1.38629
|
|
5621 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5622 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
|
|
5623 1.38629 1.38629 1.38629 1.38629
|
|
5624 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5625 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
|
|
5626 1.38629 1.38629 1.38629 1.38629
|
|
5627 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5628 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
5629 1.38629 1.38629 1.38629 1.38629
|
|
5630 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5631 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
|
|
5632 1.38629 1.38629 1.38629 1.38629
|
|
5633 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5634 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
|
|
5635 1.38629 1.38629 1.38629 1.38629
|
|
5636 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5637 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
5638 1.38629 1.38629 1.38629 1.38629
|
|
5639 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5640 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
|
|
5641 1.38629 1.38629 1.38629 1.38629
|
|
5642 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5643 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
|
|
5644 1.38629 1.38629 1.38629 1.38629
|
|
5645 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5646 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
5647 1.38629 1.38629 1.38629 1.38629
|
|
5648 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5649 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
5650 1.38629 1.38629 1.38629 1.38629
|
|
5651 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5652 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
|
|
5653 1.38629 1.38629 1.38629 1.38629
|
|
5654 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5655 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
5656 1.38629 1.38629 1.38629 1.38629
|
|
5657 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5658 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
|
|
5659 1.38629 1.38629 1.38629 1.38629
|
|
5660 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5661 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
|
|
5662 1.38629 1.38629 1.38629 1.38629
|
|
5663 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5664 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
|
|
5665 1.38629 1.38629 1.38629 1.38629
|
|
5666 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5667 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
5668 1.38629 1.38629 1.38629 1.38629
|
|
5669 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5670 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
|
|
5671 1.38629 1.38629 1.38629 1.38629
|
|
5672 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5673 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
5674 1.38629 1.38629 1.38629 1.38629
|
|
5675 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5676 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
5677 1.38629 1.38629 1.38629 1.38629
|
|
5678 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5679 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
5680 1.38629 1.38629 1.38629 1.38629
|
|
5681 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5682 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
|
|
5683 1.38629 1.38629 1.38629 1.38629
|
|
5684 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5685 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
|
|
5686 1.38629 1.38629 1.38629 1.38629
|
|
5687 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5688 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
|
|
5689 1.38629 1.38629 1.38629 1.38629
|
|
5690 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5691 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
|
|
5692 1.38629 1.38629 1.38629 1.38629
|
|
5693 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5694 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
|
|
5695 1.38629 1.38629 1.38629 1.38629
|
|
5696 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5697 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
5698 1.38629 1.38629 1.38629 1.38629
|
|
5699 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5700 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
5701 1.38629 1.38629 1.38629 1.38629
|
|
5702 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5703 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
|
|
5704 1.38629 1.38629 1.38629 1.38629
|
|
5705 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5706 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
|
|
5707 1.38629 1.38629 1.38629 1.38629
|
|
5708 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5709 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
|
|
5710 1.38629 1.38629 1.38629 1.38629
|
|
5711 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5712 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
|
|
5713 1.38629 1.38629 1.38629 1.38629
|
|
5714 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5715 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
5716 1.38629 1.38629 1.38629 1.38629
|
|
5717 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5718 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
|
|
5719 1.38629 1.38629 1.38629 1.38629
|
|
5720 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5721 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
|
|
5722 1.38629 1.38629 1.38629 1.38629
|
|
5723 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5724 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
5725 1.38629 1.38629 1.38629 1.38629
|
|
5726 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5727 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
5728 1.38629 1.38629 1.38629 1.38629
|
|
5729 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
5730 //
|
|
5731 HMMER3/f [3.2.1 | June 2018]
|
|
5732 NAME long.24.aln
|
|
5733 LENG 70
|
|
5734 MAXL 160
|
|
5735 ALPH DNA
|
|
5736 RF no
|
|
5737 MM no
|
|
5738 CONS yes
|
|
5739 CS no
|
|
5740 MAP yes
|
|
5741 DATE Tue May 28 13:12:04 2019
|
|
5742 NSEQ 2
|
|
5743 EFFN 2.000000
|
|
5744 CKSUM 4215457382
|
|
5745 STATS LOCAL MSV -7.8763 0.71945
|
|
5746 STATS LOCAL VITERBI -9.4044 0.71945
|
|
5747 STATS LOCAL FORWARD -3.0104 0.71945
|
|
5748 HMM A C G T
|
|
5749 m->m m->i m->d i->m i->i d->m d->d
|
|
5750 COMPO 0.92744 1.79235 1.33354 1.74684
|
|
5751 1.38629 1.38629 1.38629 1.38629
|
|
5752 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
5753 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
|
|
5754 1.38629 1.38629 1.38629 1.38629
|
|
5755 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5756 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
|
|
5757 1.38629 1.38629 1.38629 1.38629
|
|
5758 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5759 3 2.38910 2.82844 0.25233 2.62837 3 g - - -
|
|
5760 1.38629 1.38629 1.38629 1.38629
|
|
5761 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5762 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
|
|
5763 1.38629 1.38629 1.38629 1.38629
|
|
5764 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5765 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
|
|
5766 1.38629 1.38629 1.38629 1.38629
|
|
5767 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5768 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
|
|
5769 1.38629 1.38629 1.38629 1.38629
|
|
5770 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5771 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
|
|
5772 1.38629 1.38629 1.38629 1.38629
|
|
5773 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5774 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
|
|
5775 1.38629 1.38629 1.38629 1.38629
|
|
5776 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5777 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
|
|
5778 1.38629 1.38629 1.38629 1.38629
|
|
5779 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5780 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
5781 1.38629 1.38629 1.38629 1.38629
|
|
5782 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5783 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
|
|
5784 1.38629 1.38629 1.38629 1.38629
|
|
5785 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5786 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
|
|
5787 1.38629 1.38629 1.38629 1.38629
|
|
5788 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5789 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
|
|
5790 1.38629 1.38629 1.38629 1.38629
|
|
5791 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5792 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
|
|
5793 1.38629 1.38629 1.38629 1.38629
|
|
5794 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5795 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
5796 1.38629 1.38629 1.38629 1.38629
|
|
5797 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5798 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
|
|
5799 1.38629 1.38629 1.38629 1.38629
|
|
5800 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5801 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
|
|
5802 1.38629 1.38629 1.38629 1.38629
|
|
5803 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5804 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
|
|
5805 1.38629 1.38629 1.38629 1.38629
|
|
5806 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5807 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
|
|
5808 1.38629 1.38629 1.38629 1.38629
|
|
5809 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5810 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
|
|
5811 1.38629 1.38629 1.38629 1.38629
|
|
5812 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5813 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
5814 1.38629 1.38629 1.38629 1.38629
|
|
5815 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5816 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
5817 1.38629 1.38629 1.38629 1.38629
|
|
5818 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5819 23 2.38910 2.82844 0.25233 2.62837 23 g - - -
|
|
5820 1.38629 1.38629 1.38629 1.38629
|
|
5821 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5822 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
5823 1.38629 1.38629 1.38629 1.38629
|
|
5824 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5825 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
|
|
5826 1.38629 1.38629 1.38629 1.38629
|
|
5827 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5828 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
5829 1.38629 1.38629 1.38629 1.38629
|
|
5830 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5831 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
5832 1.38629 1.38629 1.38629 1.38629
|
|
5833 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5834 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
|
|
5835 1.38629 1.38629 1.38629 1.38629
|
|
5836 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5837 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
|
|
5838 1.38629 1.38629 1.38629 1.38629
|
|
5839 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5840 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
|
|
5841 1.38629 1.38629 1.38629 1.38629
|
|
5842 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5843 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
|
|
5844 1.38629 1.38629 1.38629 1.38629
|
|
5845 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5846 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
5847 1.38629 1.38629 1.38629 1.38629
|
|
5848 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5849 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
|
|
5850 1.38629 1.38629 1.38629 1.38629
|
|
5851 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5852 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
5853 1.38629 1.38629 1.38629 1.38629
|
|
5854 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5855 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
5856 1.38629 1.38629 1.38629 1.38629
|
|
5857 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5858 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
|
|
5859 1.38629 1.38629 1.38629 1.38629
|
|
5860 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5861 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
|
|
5862 1.38629 1.38629 1.38629 1.38629
|
|
5863 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5864 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
5865 1.38629 1.38629 1.38629 1.38629
|
|
5866 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5867 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
|
|
5868 1.38629 1.38629 1.38629 1.38629
|
|
5869 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5870 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
|
|
5871 1.38629 1.38629 1.38629 1.38629
|
|
5872 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5873 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
|
|
5874 1.38629 1.38629 1.38629 1.38629
|
|
5875 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5876 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
5877 1.38629 1.38629 1.38629 1.38629
|
|
5878 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5879 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
5880 1.38629 1.38629 1.38629 1.38629
|
|
5881 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5882 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
|
|
5883 1.38629 1.38629 1.38629 1.38629
|
|
5884 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5885 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
5886 1.38629 1.38629 1.38629 1.38629
|
|
5887 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5888 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
|
|
5889 1.38629 1.38629 1.38629 1.38629
|
|
5890 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5891 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
5892 1.38629 1.38629 1.38629 1.38629
|
|
5893 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5894 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
|
|
5895 1.38629 1.38629 1.38629 1.38629
|
|
5896 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5897 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
|
|
5898 1.38629 1.38629 1.38629 1.38629
|
|
5899 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5900 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
5901 1.38629 1.38629 1.38629 1.38629
|
|
5902 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5903 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
5904 1.38629 1.38629 1.38629 1.38629
|
|
5905 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5906 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
|
|
5907 1.38629 1.38629 1.38629 1.38629
|
|
5908 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5909 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
5910 1.38629 1.38629 1.38629 1.38629
|
|
5911 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5912 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
5913 1.38629 1.38629 1.38629 1.38629
|
|
5914 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5915 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
5916 1.38629 1.38629 1.38629 1.38629
|
|
5917 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5918 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
|
|
5919 1.38629 1.38629 1.38629 1.38629
|
|
5920 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5921 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
|
|
5922 1.38629 1.38629 1.38629 1.38629
|
|
5923 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5924 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
5925 1.38629 1.38629 1.38629 1.38629
|
|
5926 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5927 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
5928 1.38629 1.38629 1.38629 1.38629
|
|
5929 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5930 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
5931 1.38629 1.38629 1.38629 1.38629
|
|
5932 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5933 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
|
|
5934 1.38629 1.38629 1.38629 1.38629
|
|
5935 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5936 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
5937 1.38629 1.38629 1.38629 1.38629
|
|
5938 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5939 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
5940 1.38629 1.38629 1.38629 1.38629
|
|
5941 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5942 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
5943 1.38629 1.38629 1.38629 1.38629
|
|
5944 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5945 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
|
|
5946 1.38629 1.38629 1.38629 1.38629
|
|
5947 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5948 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
|
|
5949 1.38629 1.38629 1.38629 1.38629
|
|
5950 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5951 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
|
|
5952 1.38629 1.38629 1.38629 1.38629
|
|
5953 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5954 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
|
|
5955 1.38629 1.38629 1.38629 1.38629
|
|
5956 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5957 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
5958 1.38629 1.38629 1.38629 1.38629
|
|
5959 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5960 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
|
|
5961 1.38629 1.38629 1.38629 1.38629
|
|
5962 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
5963 //
|
|
5964 HMMER3/f [3.2.1 | June 2018]
|
|
5965 NAME long.25.aln
|
|
5966 LENG 70
|
|
5967 MAXL 160
|
|
5968 ALPH DNA
|
|
5969 RF no
|
|
5970 MM no
|
|
5971 CONS yes
|
|
5972 CS no
|
|
5973 MAP yes
|
|
5974 DATE Tue May 28 13:12:04 2019
|
|
5975 NSEQ 2
|
|
5976 EFFN 2.000000
|
|
5977 CKSUM 648747008
|
|
5978 STATS LOCAL MSV -8.0253 0.72144
|
|
5979 STATS LOCAL VITERBI -9.3054 0.72144
|
|
5980 STATS LOCAL FORWARD -3.5454 0.72144
|
|
5981 HMM A C G T
|
|
5982 m->m m->i m->d i->m i->i d->m d->d
|
|
5983 COMPO 1.34693 1.35348 1.61412 1.26387
|
|
5984 1.38629 1.38629 1.38629 1.38629
|
|
5985 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
5986 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
5987 1.38629 1.38629 1.38629 1.38629
|
|
5988 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5989 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
|
|
5990 1.38629 1.38629 1.38629 1.38629
|
|
5991 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5992 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
|
|
5993 1.38629 1.38629 1.38629 1.38629
|
|
5994 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5995 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
|
|
5996 1.38629 1.38629 1.38629 1.38629
|
|
5997 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5998 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
|
|
5999 1.38629 1.38629 1.38629 1.38629
|
|
6000 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6001 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
6002 1.38629 1.38629 1.38629 1.38629
|
|
6003 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6004 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
|
|
6005 1.38629 1.38629 1.38629 1.38629
|
|
6006 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6007 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
|
|
6008 1.38629 1.38629 1.38629 1.38629
|
|
6009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6010 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
6011 1.38629 1.38629 1.38629 1.38629
|
|
6012 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6013 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
|
|
6014 1.38629 1.38629 1.38629 1.38629
|
|
6015 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6016 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
|
|
6017 1.38629 1.38629 1.38629 1.38629
|
|
6018 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6019 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
6020 1.38629 1.38629 1.38629 1.38629
|
|
6021 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6022 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
|
|
6023 1.38629 1.38629 1.38629 1.38629
|
|
6024 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6025 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
|
|
6026 1.38629 1.38629 1.38629 1.38629
|
|
6027 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6028 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
|
|
6029 1.38629 1.38629 1.38629 1.38629
|
|
6030 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6031 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
|
|
6032 1.38629 1.38629 1.38629 1.38629
|
|
6033 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6034 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
|
|
6035 1.38629 1.38629 1.38629 1.38629
|
|
6036 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6037 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
|
|
6038 1.38629 1.38629 1.38629 1.38629
|
|
6039 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6040 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
|
|
6041 1.38629 1.38629 1.38629 1.38629
|
|
6042 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6043 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
6044 1.38629 1.38629 1.38629 1.38629
|
|
6045 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6046 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
|
|
6047 1.38629 1.38629 1.38629 1.38629
|
|
6048 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6049 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
|
|
6050 1.38629 1.38629 1.38629 1.38629
|
|
6051 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6052 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
|
|
6053 1.38629 1.38629 1.38629 1.38629
|
|
6054 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6055 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
|
|
6056 1.38629 1.38629 1.38629 1.38629
|
|
6057 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6058 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
|
|
6059 1.38629 1.38629 1.38629 1.38629
|
|
6060 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6061 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
6062 1.38629 1.38629 1.38629 1.38629
|
|
6063 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6064 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
|
|
6065 1.38629 1.38629 1.38629 1.38629
|
|
6066 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6067 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
|
|
6068 1.38629 1.38629 1.38629 1.38629
|
|
6069 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6070 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
6071 1.38629 1.38629 1.38629 1.38629
|
|
6072 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6073 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
|
|
6074 1.38629 1.38629 1.38629 1.38629
|
|
6075 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6076 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
6077 1.38629 1.38629 1.38629 1.38629
|
|
6078 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6079 32 2.38910 2.82844 0.25233 2.62837 32 g - - -
|
|
6080 1.38629 1.38629 1.38629 1.38629
|
|
6081 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6082 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
6083 1.38629 1.38629 1.38629 1.38629
|
|
6084 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6085 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
6086 1.38629 1.38629 1.38629 1.38629
|
|
6087 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6088 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
|
|
6089 1.38629 1.38629 1.38629 1.38629
|
|
6090 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6091 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
6092 1.38629 1.38629 1.38629 1.38629
|
|
6093 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6094 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
|
|
6095 1.38629 1.38629 1.38629 1.38629
|
|
6096 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6097 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
|
|
6098 1.38629 1.38629 1.38629 1.38629
|
|
6099 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6100 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
|
|
6101 1.38629 1.38629 1.38629 1.38629
|
|
6102 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6103 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
|
|
6104 1.38629 1.38629 1.38629 1.38629
|
|
6105 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6106 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
|
|
6107 1.38629 1.38629 1.38629 1.38629
|
|
6108 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6109 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
|
|
6110 1.38629 1.38629 1.38629 1.38629
|
|
6111 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6112 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
6113 1.38629 1.38629 1.38629 1.38629
|
|
6114 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6115 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
6116 1.38629 1.38629 1.38629 1.38629
|
|
6117 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6118 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
6119 1.38629 1.38629 1.38629 1.38629
|
|
6120 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6121 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
6122 1.38629 1.38629 1.38629 1.38629
|
|
6123 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6124 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
|
|
6125 1.38629 1.38629 1.38629 1.38629
|
|
6126 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6127 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
|
|
6128 1.38629 1.38629 1.38629 1.38629
|
|
6129 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6130 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
|
|
6131 1.38629 1.38629 1.38629 1.38629
|
|
6132 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6133 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
|
|
6134 1.38629 1.38629 1.38629 1.38629
|
|
6135 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6136 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
|
|
6137 1.38629 1.38629 1.38629 1.38629
|
|
6138 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6139 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
|
|
6140 1.38629 1.38629 1.38629 1.38629
|
|
6141 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6142 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
|
|
6143 1.38629 1.38629 1.38629 1.38629
|
|
6144 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6145 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
6146 1.38629 1.38629 1.38629 1.38629
|
|
6147 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6148 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
6149 1.38629 1.38629 1.38629 1.38629
|
|
6150 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6151 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
6152 1.38629 1.38629 1.38629 1.38629
|
|
6153 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6154 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
|
|
6155 1.38629 1.38629 1.38629 1.38629
|
|
6156 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6157 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
6158 1.38629 1.38629 1.38629 1.38629
|
|
6159 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6160 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
6161 1.38629 1.38629 1.38629 1.38629
|
|
6162 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6163 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
|
|
6164 1.38629 1.38629 1.38629 1.38629
|
|
6165 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6166 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
6167 1.38629 1.38629 1.38629 1.38629
|
|
6168 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6169 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
6170 1.38629 1.38629 1.38629 1.38629
|
|
6171 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6172 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
|
|
6173 1.38629 1.38629 1.38629 1.38629
|
|
6174 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6175 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
6176 1.38629 1.38629 1.38629 1.38629
|
|
6177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6178 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
|
|
6179 1.38629 1.38629 1.38629 1.38629
|
|
6180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6181 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
6182 1.38629 1.38629 1.38629 1.38629
|
|
6183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6184 67 2.38910 2.82844 0.25233 2.62837 67 g - - -
|
|
6185 1.38629 1.38629 1.38629 1.38629
|
|
6186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6187 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
|
|
6188 1.38629 1.38629 1.38629 1.38629
|
|
6189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6190 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
|
|
6191 1.38629 1.38629 1.38629 1.38629
|
|
6192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6193 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
6194 1.38629 1.38629 1.38629 1.38629
|
|
6195 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
6196 //
|
|
6197 HMMER3/f [3.2.1 | June 2018]
|
|
6198 NAME long.26.aln
|
|
6199 LENG 70
|
|
6200 MAXL 160
|
|
6201 ALPH DNA
|
|
6202 RF no
|
|
6203 MM no
|
|
6204 CONS yes
|
|
6205 CS no
|
|
6206 MAP yes
|
|
6207 DATE Tue May 28 13:12:03 2019
|
|
6208 NSEQ 2
|
|
6209 EFFN 2.000000
|
|
6210 CKSUM 497189614
|
|
6211 STATS LOCAL MSV -7.8241 0.72101
|
|
6212 STATS LOCAL VITERBI -9.1905 0.72101
|
|
6213 STATS LOCAL FORWARD -3.6608 0.72101
|
|
6214 HMM A C G T
|
|
6215 m->m m->i m->d i->m i->i d->m d->d
|
|
6216 COMPO 1.28628 1.27547 1.57145 1.44114
|
|
6217 1.38629 1.38629 1.38629 1.38629
|
|
6218 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
6219 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
|
|
6220 1.38629 1.38629 1.38629 1.38629
|
|
6221 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6222 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
|
|
6223 1.38629 1.38629 1.38629 1.38629
|
|
6224 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6225 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
|
|
6226 1.38629 1.38629 1.38629 1.38629
|
|
6227 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6228 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
|
|
6229 1.38629 1.38629 1.38629 1.38629
|
|
6230 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6231 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
6232 1.38629 1.38629 1.38629 1.38629
|
|
6233 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6234 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
|
|
6235 1.38629 1.38629 1.38629 1.38629
|
|
6236 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6237 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
6238 1.38629 1.38629 1.38629 1.38629
|
|
6239 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6240 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
6241 1.38629 1.38629 1.38629 1.38629
|
|
6242 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6243 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
|
|
6244 1.38629 1.38629 1.38629 1.38629
|
|
6245 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6246 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
6247 1.38629 1.38629 1.38629 1.38629
|
|
6248 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6249 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
|
|
6250 1.38629 1.38629 1.38629 1.38629
|
|
6251 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6252 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
|
|
6253 1.38629 1.38629 1.38629 1.38629
|
|
6254 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6255 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
|
|
6256 1.38629 1.38629 1.38629 1.38629
|
|
6257 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6258 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
|
|
6259 1.38629 1.38629 1.38629 1.38629
|
|
6260 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6261 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
|
|
6262 1.38629 1.38629 1.38629 1.38629
|
|
6263 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6264 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
6265 1.38629 1.38629 1.38629 1.38629
|
|
6266 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6267 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
6268 1.38629 1.38629 1.38629 1.38629
|
|
6269 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6270 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
|
|
6271 1.38629 1.38629 1.38629 1.38629
|
|
6272 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6273 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
|
|
6274 1.38629 1.38629 1.38629 1.38629
|
|
6275 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6276 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
|
|
6277 1.38629 1.38629 1.38629 1.38629
|
|
6278 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6279 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
6280 1.38629 1.38629 1.38629 1.38629
|
|
6281 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6282 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
|
|
6283 1.38629 1.38629 1.38629 1.38629
|
|
6284 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6285 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
6286 1.38629 1.38629 1.38629 1.38629
|
|
6287 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6288 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
|
|
6289 1.38629 1.38629 1.38629 1.38629
|
|
6290 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6291 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
|
|
6292 1.38629 1.38629 1.38629 1.38629
|
|
6293 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6294 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
|
|
6295 1.38629 1.38629 1.38629 1.38629
|
|
6296 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6297 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
|
|
6298 1.38629 1.38629 1.38629 1.38629
|
|
6299 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6300 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
|
|
6301 1.38629 1.38629 1.38629 1.38629
|
|
6302 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6303 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
|
|
6304 1.38629 1.38629 1.38629 1.38629
|
|
6305 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6306 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
|
|
6307 1.38629 1.38629 1.38629 1.38629
|
|
6308 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6309 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
6310 1.38629 1.38629 1.38629 1.38629
|
|
6311 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6312 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
|
|
6313 1.38629 1.38629 1.38629 1.38629
|
|
6314 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6315 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
|
|
6316 1.38629 1.38629 1.38629 1.38629
|
|
6317 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6318 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
6319 1.38629 1.38629 1.38629 1.38629
|
|
6320 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6321 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
6322 1.38629 1.38629 1.38629 1.38629
|
|
6323 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6324 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
|
|
6325 1.38629 1.38629 1.38629 1.38629
|
|
6326 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6327 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
|
|
6328 1.38629 1.38629 1.38629 1.38629
|
|
6329 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6330 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
6331 1.38629 1.38629 1.38629 1.38629
|
|
6332 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6333 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
|
|
6334 1.38629 1.38629 1.38629 1.38629
|
|
6335 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6336 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
6337 1.38629 1.38629 1.38629 1.38629
|
|
6338 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6339 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
|
|
6340 1.38629 1.38629 1.38629 1.38629
|
|
6341 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6342 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
|
|
6343 1.38629 1.38629 1.38629 1.38629
|
|
6344 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6345 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
|
|
6346 1.38629 1.38629 1.38629 1.38629
|
|
6347 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6348 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
|
|
6349 1.38629 1.38629 1.38629 1.38629
|
|
6350 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6351 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
6352 1.38629 1.38629 1.38629 1.38629
|
|
6353 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6354 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
6355 1.38629 1.38629 1.38629 1.38629
|
|
6356 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6357 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
|
|
6358 1.38629 1.38629 1.38629 1.38629
|
|
6359 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6360 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
|
|
6361 1.38629 1.38629 1.38629 1.38629
|
|
6362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6363 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
|
|
6364 1.38629 1.38629 1.38629 1.38629
|
|
6365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6366 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
|
|
6367 1.38629 1.38629 1.38629 1.38629
|
|
6368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6369 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
|
|
6370 1.38629 1.38629 1.38629 1.38629
|
|
6371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6372 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
6373 1.38629 1.38629 1.38629 1.38629
|
|
6374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6375 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
|
|
6376 1.38629 1.38629 1.38629 1.38629
|
|
6377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6378 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
|
|
6379 1.38629 1.38629 1.38629 1.38629
|
|
6380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6381 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
|
|
6382 1.38629 1.38629 1.38629 1.38629
|
|
6383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6384 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
6385 1.38629 1.38629 1.38629 1.38629
|
|
6386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6387 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
|
|
6388 1.38629 1.38629 1.38629 1.38629
|
|
6389 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6390 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
6391 1.38629 1.38629 1.38629 1.38629
|
|
6392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6393 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
6394 1.38629 1.38629 1.38629 1.38629
|
|
6395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6396 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
|
|
6397 1.38629 1.38629 1.38629 1.38629
|
|
6398 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6399 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
|
|
6400 1.38629 1.38629 1.38629 1.38629
|
|
6401 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6402 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
|
|
6403 1.38629 1.38629 1.38629 1.38629
|
|
6404 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6405 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
|
|
6406 1.38629 1.38629 1.38629 1.38629
|
|
6407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6408 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
|
|
6409 1.38629 1.38629 1.38629 1.38629
|
|
6410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6411 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
|
|
6412 1.38629 1.38629 1.38629 1.38629
|
|
6413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6414 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
6415 1.38629 1.38629 1.38629 1.38629
|
|
6416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6417 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
6418 1.38629 1.38629 1.38629 1.38629
|
|
6419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6420 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
|
|
6421 1.38629 1.38629 1.38629 1.38629
|
|
6422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6423 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
|
|
6424 1.38629 1.38629 1.38629 1.38629
|
|
6425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6426 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
|
|
6427 1.38629 1.38629 1.38629 1.38629
|
|
6428 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
6429 //
|
|
6430 HMMER3/f [3.2.1 | June 2018]
|
|
6431 NAME long.27.aln
|
|
6432 LENG 70
|
|
6433 MAXL 160
|
|
6434 ALPH DNA
|
|
6435 RF no
|
|
6436 MM no
|
|
6437 CONS yes
|
|
6438 CS no
|
|
6439 MAP yes
|
|
6440 DATE Tue May 28 13:12:03 2019
|
|
6441 NSEQ 2
|
|
6442 EFFN 2.000000
|
|
6443 CKSUM 3001191573
|
|
6444 STATS LOCAL MSV -8.4593 0.72188
|
|
6445 STATS LOCAL VITERBI -9.4223 0.72188
|
|
6446 STATS LOCAL FORWARD -3.4981 0.72188
|
|
6447 HMM A C G T
|
|
6448 m->m m->i m->d i->m i->i d->m d->d
|
|
6449 COMPO 1.51776 1.58057 1.52260 1.03059
|
|
6450 1.38629 1.38629 1.38629 1.38629
|
|
6451 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
6452 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
6453 1.38629 1.38629 1.38629 1.38629
|
|
6454 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6455 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
|
|
6456 1.38629 1.38629 1.38629 1.38629
|
|
6457 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6458 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
|
|
6459 1.38629 1.38629 1.38629 1.38629
|
|
6460 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6461 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
|
|
6462 1.38629 1.38629 1.38629 1.38629
|
|
6463 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6464 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
|
|
6465 1.38629 1.38629 1.38629 1.38629
|
|
6466 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6467 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
6468 1.38629 1.38629 1.38629 1.38629
|
|
6469 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6470 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
|
|
6471 1.38629 1.38629 1.38629 1.38629
|
|
6472 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6473 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
6474 1.38629 1.38629 1.38629 1.38629
|
|
6475 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6476 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
|
|
6477 1.38629 1.38629 1.38629 1.38629
|
|
6478 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6479 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
|
|
6480 1.38629 1.38629 1.38629 1.38629
|
|
6481 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6482 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
6483 1.38629 1.38629 1.38629 1.38629
|
|
6484 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6485 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
|
|
6486 1.38629 1.38629 1.38629 1.38629
|
|
6487 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6488 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
6489 1.38629 1.38629 1.38629 1.38629
|
|
6490 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6491 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
|
|
6492 1.38629 1.38629 1.38629 1.38629
|
|
6493 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6494 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
6495 1.38629 1.38629 1.38629 1.38629
|
|
6496 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6497 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
|
|
6498 1.38629 1.38629 1.38629 1.38629
|
|
6499 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6500 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
6501 1.38629 1.38629 1.38629 1.38629
|
|
6502 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6503 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
6504 1.38629 1.38629 1.38629 1.38629
|
|
6505 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6506 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
|
|
6507 1.38629 1.38629 1.38629 1.38629
|
|
6508 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6509 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
|
|
6510 1.38629 1.38629 1.38629 1.38629
|
|
6511 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6512 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
|
|
6513 1.38629 1.38629 1.38629 1.38629
|
|
6514 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6515 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
|
|
6516 1.38629 1.38629 1.38629 1.38629
|
|
6517 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6518 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
6519 1.38629 1.38629 1.38629 1.38629
|
|
6520 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6521 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
|
|
6522 1.38629 1.38629 1.38629 1.38629
|
|
6523 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6524 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
|
|
6525 1.38629 1.38629 1.38629 1.38629
|
|
6526 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6527 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
|
|
6528 1.38629 1.38629 1.38629 1.38629
|
|
6529 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6530 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
6531 1.38629 1.38629 1.38629 1.38629
|
|
6532 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6533 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
|
|
6534 1.38629 1.38629 1.38629 1.38629
|
|
6535 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6536 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
6537 1.38629 1.38629 1.38629 1.38629
|
|
6538 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6539 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
|
|
6540 1.38629 1.38629 1.38629 1.38629
|
|
6541 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6542 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
6543 1.38629 1.38629 1.38629 1.38629
|
|
6544 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6545 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
6546 1.38629 1.38629 1.38629 1.38629
|
|
6547 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6548 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
6549 1.38629 1.38629 1.38629 1.38629
|
|
6550 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6551 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
6552 1.38629 1.38629 1.38629 1.38629
|
|
6553 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6554 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
|
|
6555 1.38629 1.38629 1.38629 1.38629
|
|
6556 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6557 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
6558 1.38629 1.38629 1.38629 1.38629
|
|
6559 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6560 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
|
|
6561 1.38629 1.38629 1.38629 1.38629
|
|
6562 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6563 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
6564 1.38629 1.38629 1.38629 1.38629
|
|
6565 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6566 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
6567 1.38629 1.38629 1.38629 1.38629
|
|
6568 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6569 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
|
|
6570 1.38629 1.38629 1.38629 1.38629
|
|
6571 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6572 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
|
|
6573 1.38629 1.38629 1.38629 1.38629
|
|
6574 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6575 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
|
|
6576 1.38629 1.38629 1.38629 1.38629
|
|
6577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6578 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
|
|
6579 1.38629 1.38629 1.38629 1.38629
|
|
6580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6581 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
6582 1.38629 1.38629 1.38629 1.38629
|
|
6583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6584 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
6585 1.38629 1.38629 1.38629 1.38629
|
|
6586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6587 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
6588 1.38629 1.38629 1.38629 1.38629
|
|
6589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6590 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
|
|
6591 1.38629 1.38629 1.38629 1.38629
|
|
6592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6593 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
|
|
6594 1.38629 1.38629 1.38629 1.38629
|
|
6595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6596 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
|
|
6597 1.38629 1.38629 1.38629 1.38629
|
|
6598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6599 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
6600 1.38629 1.38629 1.38629 1.38629
|
|
6601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6602 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
6603 1.38629 1.38629 1.38629 1.38629
|
|
6604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6605 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
6606 1.38629 1.38629 1.38629 1.38629
|
|
6607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6608 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
|
|
6609 1.38629 1.38629 1.38629 1.38629
|
|
6610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6611 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
6612 1.38629 1.38629 1.38629 1.38629
|
|
6613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6614 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
|
|
6615 1.38629 1.38629 1.38629 1.38629
|
|
6616 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6617 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
6618 1.38629 1.38629 1.38629 1.38629
|
|
6619 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6620 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
|
|
6621 1.38629 1.38629 1.38629 1.38629
|
|
6622 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6623 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
|
|
6624 1.38629 1.38629 1.38629 1.38629
|
|
6625 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6626 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
|
|
6627 1.38629 1.38629 1.38629 1.38629
|
|
6628 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6629 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
|
|
6630 1.38629 1.38629 1.38629 1.38629
|
|
6631 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6632 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
|
|
6633 1.38629 1.38629 1.38629 1.38629
|
|
6634 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6635 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
|
|
6636 1.38629 1.38629 1.38629 1.38629
|
|
6637 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6638 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
|
|
6639 1.38629 1.38629 1.38629 1.38629
|
|
6640 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6641 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
6642 1.38629 1.38629 1.38629 1.38629
|
|
6643 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6644 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
|
|
6645 1.38629 1.38629 1.38629 1.38629
|
|
6646 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6647 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
6648 1.38629 1.38629 1.38629 1.38629
|
|
6649 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6650 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
|
|
6651 1.38629 1.38629 1.38629 1.38629
|
|
6652 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6653 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
|
|
6654 1.38629 1.38629 1.38629 1.38629
|
|
6655 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6656 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
|
|
6657 1.38629 1.38629 1.38629 1.38629
|
|
6658 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6659 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
|
|
6660 1.38629 1.38629 1.38629 1.38629
|
|
6661 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
6662 //
|
|
6663 HMMER3/f [3.2.1 | June 2018]
|
|
6664 NAME long.28.aln
|
|
6665 LENG 70
|
|
6666 MAXL 160
|
|
6667 ALPH DNA
|
|
6668 RF no
|
|
6669 MM no
|
|
6670 CONS yes
|
|
6671 CS no
|
|
6672 MAP yes
|
|
6673 DATE Tue May 28 13:12:03 2019
|
|
6674 NSEQ 2
|
|
6675 EFFN 2.000000
|
|
6676 CKSUM 1508026264
|
|
6677 STATS LOCAL MSV -7.6335 0.71997
|
|
6678 STATS LOCAL VITERBI -9.1422 0.71997
|
|
6679 STATS LOCAL FORWARD -3.5559 0.71997
|
|
6680 HMM A C G T
|
|
6681 m->m m->i m->d i->m i->i d->m d->d
|
|
6682 COMPO 1.19716 1.45323 1.30893 1.63976
|
|
6683 1.38629 1.38629 1.38629 1.38629
|
|
6684 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
6685 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
6686 1.38629 1.38629 1.38629 1.38629
|
|
6687 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6688 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
|
|
6689 1.38629 1.38629 1.38629 1.38629
|
|
6690 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6691 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
|
|
6692 1.38629 1.38629 1.38629 1.38629
|
|
6693 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6694 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
|
|
6695 1.38629 1.38629 1.38629 1.38629
|
|
6696 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6697 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
|
|
6698 1.38629 1.38629 1.38629 1.38629
|
|
6699 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6700 6 2.46232 0.33808 2.58153 2.07174 6 c - - -
|
|
6701 1.38629 1.38629 1.38629 1.38629
|
|
6702 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6703 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
|
|
6704 1.38629 1.38629 1.38629 1.38629
|
|
6705 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6706 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
|
|
6707 1.38629 1.38629 1.38629 1.38629
|
|
6708 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6709 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
|
|
6710 1.38629 1.38629 1.38629 1.38629
|
|
6711 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6712 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
|
|
6713 1.38629 1.38629 1.38629 1.38629
|
|
6714 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6715 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
6716 1.38629 1.38629 1.38629 1.38629
|
|
6717 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6718 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
|
|
6719 1.38629 1.38629 1.38629 1.38629
|
|
6720 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6721 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
6722 1.38629 1.38629 1.38629 1.38629
|
|
6723 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6724 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
|
|
6725 1.38629 1.38629 1.38629 1.38629
|
|
6726 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6727 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
|
|
6728 1.38629 1.38629 1.38629 1.38629
|
|
6729 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6730 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
|
|
6731 1.38629 1.38629 1.38629 1.38629
|
|
6732 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6733 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
6734 1.38629 1.38629 1.38629 1.38629
|
|
6735 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6736 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
6737 1.38629 1.38629 1.38629 1.38629
|
|
6738 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6739 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
|
|
6740 1.38629 1.38629 1.38629 1.38629
|
|
6741 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6742 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
6743 1.38629 1.38629 1.38629 1.38629
|
|
6744 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6745 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
|
|
6746 1.38629 1.38629 1.38629 1.38629
|
|
6747 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6748 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
|
|
6749 1.38629 1.38629 1.38629 1.38629
|
|
6750 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6751 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
6752 1.38629 1.38629 1.38629 1.38629
|
|
6753 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6754 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
6755 1.38629 1.38629 1.38629 1.38629
|
|
6756 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6757 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
6758 1.38629 1.38629 1.38629 1.38629
|
|
6759 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6760 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
|
|
6761 1.38629 1.38629 1.38629 1.38629
|
|
6762 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6763 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
6764 1.38629 1.38629 1.38629 1.38629
|
|
6765 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6766 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
|
|
6767 1.38629 1.38629 1.38629 1.38629
|
|
6768 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6769 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
|
|
6770 1.38629 1.38629 1.38629 1.38629
|
|
6771 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6772 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
|
|
6773 1.38629 1.38629 1.38629 1.38629
|
|
6774 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6775 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
6776 1.38629 1.38629 1.38629 1.38629
|
|
6777 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6778 32 2.38910 2.82844 0.25233 2.62837 32 g - - -
|
|
6779 1.38629 1.38629 1.38629 1.38629
|
|
6780 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6781 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
|
|
6782 1.38629 1.38629 1.38629 1.38629
|
|
6783 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6784 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
|
|
6785 1.38629 1.38629 1.38629 1.38629
|
|
6786 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6787 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
|
|
6788 1.38629 1.38629 1.38629 1.38629
|
|
6789 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6790 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
|
|
6791 1.38629 1.38629 1.38629 1.38629
|
|
6792 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6793 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
|
|
6794 1.38629 1.38629 1.38629 1.38629
|
|
6795 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6796 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
|
|
6797 1.38629 1.38629 1.38629 1.38629
|
|
6798 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6799 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
|
|
6800 1.38629 1.38629 1.38629 1.38629
|
|
6801 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6802 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
6803 1.38629 1.38629 1.38629 1.38629
|
|
6804 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6805 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
6806 1.38629 1.38629 1.38629 1.38629
|
|
6807 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6808 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
6809 1.38629 1.38629 1.38629 1.38629
|
|
6810 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6811 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
|
|
6812 1.38629 1.38629 1.38629 1.38629
|
|
6813 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6814 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
|
|
6815 1.38629 1.38629 1.38629 1.38629
|
|
6816 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6817 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
|
|
6818 1.38629 1.38629 1.38629 1.38629
|
|
6819 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6820 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
|
|
6821 1.38629 1.38629 1.38629 1.38629
|
|
6822 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6823 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
|
|
6824 1.38629 1.38629 1.38629 1.38629
|
|
6825 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6826 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
|
|
6827 1.38629 1.38629 1.38629 1.38629
|
|
6828 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6829 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
|
|
6830 1.38629 1.38629 1.38629 1.38629
|
|
6831 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6832 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
|
|
6833 1.38629 1.38629 1.38629 1.38629
|
|
6834 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6835 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
6836 1.38629 1.38629 1.38629 1.38629
|
|
6837 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6838 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
6839 1.38629 1.38629 1.38629 1.38629
|
|
6840 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6841 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
|
|
6842 1.38629 1.38629 1.38629 1.38629
|
|
6843 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6844 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
|
|
6845 1.38629 1.38629 1.38629 1.38629
|
|
6846 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6847 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
|
|
6848 1.38629 1.38629 1.38629 1.38629
|
|
6849 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6850 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
|
|
6851 1.38629 1.38629 1.38629 1.38629
|
|
6852 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6853 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
|
|
6854 1.38629 1.38629 1.38629 1.38629
|
|
6855 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6856 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
6857 1.38629 1.38629 1.38629 1.38629
|
|
6858 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6859 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
|
|
6860 1.38629 1.38629 1.38629 1.38629
|
|
6861 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6862 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
6863 1.38629 1.38629 1.38629 1.38629
|
|
6864 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6865 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
6866 1.38629 1.38629 1.38629 1.38629
|
|
6867 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6868 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
|
|
6869 1.38629 1.38629 1.38629 1.38629
|
|
6870 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6871 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
6872 1.38629 1.38629 1.38629 1.38629
|
|
6873 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6874 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
6875 1.38629 1.38629 1.38629 1.38629
|
|
6876 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6877 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
|
|
6878 1.38629 1.38629 1.38629 1.38629
|
|
6879 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6880 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
|
|
6881 1.38629 1.38629 1.38629 1.38629
|
|
6882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6883 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
|
|
6884 1.38629 1.38629 1.38629 1.38629
|
|
6885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6886 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
|
|
6887 1.38629 1.38629 1.38629 1.38629
|
|
6888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6889 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
|
|
6890 1.38629 1.38629 1.38629 1.38629
|
|
6891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6892 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
|
|
6893 1.38629 1.38629 1.38629 1.38629
|
|
6894 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
6895 //
|
|
6896 HMMER3/f [3.2.1 | June 2018]
|
|
6897 NAME long.29.aln
|
|
6898 LENG 82
|
|
6899 MAXL 176
|
|
6900 ALPH DNA
|
|
6901 RF no
|
|
6902 MM no
|
|
6903 CONS yes
|
|
6904 CS no
|
|
6905 MAP yes
|
|
6906 DATE Tue May 28 13:12:04 2019
|
|
6907 NSEQ 2
|
|
6908 EFFN 2.000000
|
|
6909 CKSUM 793374180
|
|
6910 STATS LOCAL MSV -8.9232 0.73665
|
|
6911 STATS LOCAL VITERBI -10.8392 0.73665
|
|
6912 STATS LOCAL FORWARD -3.0454 0.73665
|
|
6913 HMM A C G T
|
|
6914 m->m m->i m->d i->m i->i d->m d->d
|
|
6915 COMPO 1.39622 1.43714 1.34448 1.36967
|
|
6916 1.38629 1.38629 1.38629 1.38629
|
|
6917 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
6918 1 1.84050 1.95342 1.03654 1.06480 1 g - - -
|
|
6919 1.38629 1.38629 1.38629 1.38629
|
|
6920 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6921 2 2.01896 1.01168 2.12953 0.95527 2 t - - -
|
|
6922 1.38629 1.38629 1.38629 1.38629
|
|
6923 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6924 3 1.88401 1.14290 1.03416 1.75097 3 g - - -
|
|
6925 1.38629 1.38629 1.38629 1.38629
|
|
6926 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6927 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
|
|
6928 1.38629 1.38629 1.38629 1.38629
|
|
6929 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6930 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
6931 1.38629 1.38629 1.38629 1.38629
|
|
6932 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6933 6 1.12273 2.17004 0.88086 1.92408 6 g - - -
|
|
6934 1.38629 1.38629 1.38629 1.38629
|
|
6935 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6936 7 1.12273 2.17004 0.88086 1.92408 7 g - - -
|
|
6937 1.38629 1.38629 1.38629 1.38629
|
|
6938 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
|
|
6939 8 0.56139 2.08489 1.86185 1.89791 8 a - - -
|
|
6940 1.38629 1.38629 1.38629 1.38629
|
|
6941 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
6942 9 1.91091 1.78233 1.95844 0.61114 9 t - - -
|
|
6943 1.38629 1.38629 1.38629 1.38629
|
|
6944 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
6945 10 1.98342 0.60779 2.04641 1.66785 10 c - - -
|
|
6946 1.38629 1.38629 1.38629 1.38629
|
|
6947 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
6948 11 1.97267 2.25870 0.46443 2.05625 11 g - - -
|
|
6949 1.38629 1.38629 1.38629 1.38629
|
|
6950 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
6951 12 1.91091 1.78233 1.95844 0.61114 12 t - - -
|
|
6952 1.38629 1.38629 1.38629 1.38629
|
|
6953 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
6954 13 1.98342 0.60779 2.04641 1.66785 13 c - - -
|
|
6955 1.38629 1.38629 1.38629 1.38629
|
|
6956 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
6957 14 1.98342 0.60779 2.04641 1.66785 14 c - - -
|
|
6958 1.38629 1.38629 1.38629 1.38629
|
|
6959 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
6960 15 1.98342 0.60779 2.04641 1.66785 15 c - - -
|
|
6961 1.38629 1.38629 1.38629 1.38629
|
|
6962 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
|
|
6963 16 1.12273 2.17004 0.88086 1.92408 16 g - - -
|
|
6964 1.38629 1.38629 1.38629 1.38629
|
|
6965 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6966 17 1.12273 2.17004 0.88086 1.92408 17 g - - -
|
|
6967 1.38629 1.38629 1.38629 1.38629
|
|
6968 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6969 18 1.12273 2.17004 0.88086 1.92408 18 g - - -
|
|
6970 1.38629 1.38629 1.38629 1.38629
|
|
6971 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6972 19 1.09289 1.89038 1.88803 1.01509 19 t - - -
|
|
6973 1.38629 1.38629 1.38629 1.38629
|
|
6974 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6975 20 1.12273 2.17004 0.88086 1.92408 20 g - - -
|
|
6976 1.38629 1.38629 1.38629 1.38629
|
|
6977 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6978 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
6979 1.38629 1.38629 1.38629 1.38629
|
|
6980 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6981 22 1.88401 1.14290 1.03416 1.75097 22 g - - -
|
|
6982 1.38629 1.38629 1.38629 1.38629
|
|
6983 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6984 23 1.09289 1.89038 1.88803 1.01509 23 t - - -
|
|
6985 1.38629 1.38629 1.38629 1.38629
|
|
6986 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6987 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
|
|
6988 1.38629 1.38629 1.38629 1.38629
|
|
6989 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6990 25 1.08498 1.08670 1.94700 1.70340 25 a - - -
|
|
6991 1.38629 1.38629 1.38629 1.38629
|
|
6992 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6993 26 1.88401 1.14290 1.03416 1.75097 26 g - - -
|
|
6994 1.38629 1.38629 1.38629 1.38629
|
|
6995 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6996 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
6997 1.38629 1.38629 1.38629 1.38629
|
|
6998 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6999 28 1.08498 1.08670 1.94700 1.70340 28 a - - -
|
|
7000 1.38629 1.38629 1.38629 1.38629
|
|
7001 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7002 29 1.12273 2.17004 0.88086 1.92408 29 g - - -
|
|
7003 1.38629 1.38629 1.38629 1.38629
|
|
7004 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7005 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
|
|
7006 1.38629 1.38629 1.38629 1.38629
|
|
7007 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7008 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
|
|
7009 1.38629 1.38629 1.38629 1.38629
|
|
7010 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7011 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
7012 1.38629 1.38629 1.38629 1.38629
|
|
7013 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7014 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
|
|
7015 1.38629 1.38629 1.38629 1.38629
|
|
7016 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7017 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
|
|
7018 1.38629 1.38629 1.38629 1.38629
|
|
7019 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7020 35 1.12273 2.17004 0.88086 1.92408 35 g - - -
|
|
7021 1.38629 1.38629 1.38629 1.38629
|
|
7022 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7023 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
7024 1.38629 1.38629 1.38629 1.38629
|
|
7025 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7026 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
7027 1.38629 1.38629 1.38629 1.38629
|
|
7028 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7029 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
|
|
7030 1.38629 1.38629 1.38629 1.38629
|
|
7031 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7032 39 1.12273 2.17004 0.88086 1.92408 39 g - - -
|
|
7033 1.38629 1.38629 1.38629 1.38629
|
|
7034 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7035 40 1.08498 1.08670 1.94700 1.70340 40 a - - -
|
|
7036 1.38629 1.38629 1.38629 1.38629
|
|
7037 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7038 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
7039 1.38629 1.38629 1.38629 1.38629
|
|
7040 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7041 42 1.09289 1.89038 1.88803 1.01509 42 t - - -
|
|
7042 1.38629 1.38629 1.38629 1.38629
|
|
7043 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7044 43 1.08498 1.08670 1.94700 1.70340 43 a - - -
|
|
7045 1.38629 1.38629 1.38629 1.38629
|
|
7046 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7047 44 1.84050 1.95342 1.03654 1.06480 44 g - - -
|
|
7048 1.38629 1.38629 1.38629 1.38629
|
|
7049 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7050 45 2.01896 1.01168 2.12953 0.95527 45 t - - -
|
|
7051 1.38629 1.38629 1.38629 1.38629
|
|
7052 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7053 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
|
|
7054 1.38629 1.38629 1.38629 1.38629
|
|
7055 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7056 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
7057 1.38629 1.38629 1.38629 1.38629
|
|
7058 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7059 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
|
|
7060 1.38629 1.38629 1.38629 1.38629
|
|
7061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7062 49 2.01896 1.01168 2.12953 0.95527 49 t - - -
|
|
7063 1.38629 1.38629 1.38629 1.38629
|
|
7064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7065 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
|
|
7066 1.38629 1.38629 1.38629 1.38629
|
|
7067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7068 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
|
|
7069 1.38629 1.38629 1.38629 1.38629
|
|
7070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7071 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
7072 1.38629 1.38629 1.38629 1.38629
|
|
7073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7074 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
|
|
7075 1.38629 1.38629 1.38629 1.38629
|
|
7076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7077 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
|
|
7078 1.38629 1.38629 1.38629 1.38629
|
|
7079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7080 55 2.01896 1.01168 2.12953 0.95527 55 t - - -
|
|
7081 1.38629 1.38629 1.38629 1.38629
|
|
7082 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
|
|
7083 56 1.97267 2.25870 0.46443 2.05625 56 g - - -
|
|
7084 1.38629 1.38629 1.38629 1.38629
|
|
7085 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
7086 57 0.56139 2.08489 1.86185 1.89791 57 a - - -
|
|
7087 1.38629 1.38629 1.38629 1.38629
|
|
7088 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
7089 58 1.98342 0.60779 2.04641 1.66785 58 c - - -
|
|
7090 1.38629 1.38629 1.38629 1.38629
|
|
7091 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
7092 59 1.91091 1.78233 1.95844 0.61114 59 t - - -
|
|
7093 1.38629 1.38629 1.38629 1.38629
|
|
7094 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
|
|
7095 60 2.01896 1.01168 2.12953 0.95527 60 t - - -
|
|
7096 1.38629 1.38629 1.38629 1.38629
|
|
7097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7098 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
7099 1.38629 1.38629 1.38629 1.38629
|
|
7100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7101 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
|
|
7102 1.38629 1.38629 1.38629 1.38629
|
|
7103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7104 63 1.84050 1.95342 1.03654 1.06480 63 g - - -
|
|
7105 1.38629 1.38629 1.38629 1.38629
|
|
7106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7107 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
7108 1.38629 1.38629 1.38629 1.38629
|
|
7109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7110 65 1.09289 1.89038 1.88803 1.01509 65 t - - -
|
|
7111 1.38629 1.38629 1.38629 1.38629
|
|
7112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7113 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
7114 1.38629 1.38629 1.38629 1.38629
|
|
7115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7116 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
7117 1.38629 1.38629 1.38629 1.38629
|
|
7118 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
|
|
7119 68 1.91091 1.78233 1.95844 0.61114 68 t - - -
|
|
7120 1.38629 1.38629 1.38629 1.38629
|
|
7121 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
7122 69 0.56139 2.08489 1.86185 1.89791 69 a - - -
|
|
7123 1.38629 1.38629 1.38629 1.38629
|
|
7124 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
7125 70 1.91091 1.78233 1.95844 0.61114 70 t - - -
|
|
7126 1.38629 1.38629 1.38629 1.38629
|
|
7127 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
7128 71 1.98342 0.60779 2.04641 1.66785 71 c - - -
|
|
7129 1.38629 1.38629 1.38629 1.38629
|
|
7130 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
7131 72 1.91091 1.78233 1.95844 0.61114 72 t - - -
|
|
7132 1.38629 1.38629 1.38629 1.38629
|
|
7133 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
7134 73 1.97267 2.25870 0.46443 2.05625 73 g - - -
|
|
7135 1.38629 1.38629 1.38629 1.38629
|
|
7136 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
7137 74 1.97267 2.25870 0.46443 2.05625 74 g - - -
|
|
7138 1.38629 1.38629 1.38629 1.38629
|
|
7139 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
7140 75 1.97267 2.25870 0.46443 2.05625 75 g - - -
|
|
7141 1.38629 1.38629 1.38629 1.38629
|
|
7142 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
7143 76 0.56139 2.08489 1.86185 1.89791 76 a - - -
|
|
7144 1.38629 1.38629 1.38629 1.38629
|
|
7145 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
7146 77 1.98342 0.60779 2.04641 1.66785 77 c - - -
|
|
7147 1.38629 1.38629 1.38629 1.38629
|
|
7148 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
7149 78 1.97267 2.25870 0.46443 2.05625 78 g - - -
|
|
7150 1.38629 1.38629 1.38629 1.38629
|
|
7151 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
7152 79 0.56139 2.08489 1.86185 1.89791 79 a - - -
|
|
7153 1.38629 1.38629 1.38629 1.38629
|
|
7154 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
|
|
7155 80 2.01896 1.01168 2.12953 0.95527 80 t - - -
|
|
7156 1.38629 1.38629 1.38629 1.38629
|
|
7157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7158 81 2.01896 1.01168 2.12953 0.95527 81 t - - -
|
|
7159 1.38629 1.38629 1.38629 1.38629
|
|
7160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7161 82 2.01896 1.01168 2.12953 0.95527 82 t - - -
|
|
7162 1.38629 1.38629 1.38629 1.38629
|
|
7163 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
7164 //
|
|
7165 HMMER3/f [3.2.1 | June 2018]
|
|
7166 NAME long.30.aln
|
|
7167 LENG 70
|
|
7168 MAXL 160
|
|
7169 ALPH DNA
|
|
7170 RF no
|
|
7171 MM no
|
|
7172 CONS yes
|
|
7173 CS no
|
|
7174 MAP yes
|
|
7175 DATE Tue May 28 13:12:03 2019
|
|
7176 NSEQ 2
|
|
7177 EFFN 2.000000
|
|
7178 CKSUM 4093262019
|
|
7179 STATS LOCAL MSV -7.9445 0.72024
|
|
7180 STATS LOCAL VITERBI -9.3105 0.72024
|
|
7181 STATS LOCAL FORWARD -3.3976 0.72024
|
|
7182 HMM A C G T
|
|
7183 m->m m->i m->d i->m i->i d->m d->d
|
|
7184 COMPO 1.06451 1.63146 1.44587 1.49647
|
|
7185 1.38629 1.38629 1.38629 1.38629
|
|
7186 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
7187 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
7188 1.38629 1.38629 1.38629 1.38629
|
|
7189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7190 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
|
|
7191 1.38629 1.38629 1.38629 1.38629
|
|
7192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7193 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
|
|
7194 1.38629 1.38629 1.38629 1.38629
|
|
7195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7196 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
|
|
7197 1.38629 1.38629 1.38629 1.38629
|
|
7198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7199 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
|
|
7200 1.38629 1.38629 1.38629 1.38629
|
|
7201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7202 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
|
|
7203 1.38629 1.38629 1.38629 1.38629
|
|
7204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7205 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
|
|
7206 1.38629 1.38629 1.38629 1.38629
|
|
7207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7208 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
|
|
7209 1.38629 1.38629 1.38629 1.38629
|
|
7210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7211 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
7212 1.38629 1.38629 1.38629 1.38629
|
|
7213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7214 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
|
|
7215 1.38629 1.38629 1.38629 1.38629
|
|
7216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7217 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
7218 1.38629 1.38629 1.38629 1.38629
|
|
7219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7220 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
|
|
7221 1.38629 1.38629 1.38629 1.38629
|
|
7222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7223 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
|
|
7224 1.38629 1.38629 1.38629 1.38629
|
|
7225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7226 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
|
|
7227 1.38629 1.38629 1.38629 1.38629
|
|
7228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7229 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
7230 1.38629 1.38629 1.38629 1.38629
|
|
7231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7232 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
|
|
7233 1.38629 1.38629 1.38629 1.38629
|
|
7234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7235 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
7236 1.38629 1.38629 1.38629 1.38629
|
|
7237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7238 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
7239 1.38629 1.38629 1.38629 1.38629
|
|
7240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7241 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
|
|
7242 1.38629 1.38629 1.38629 1.38629
|
|
7243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7244 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
|
|
7245 1.38629 1.38629 1.38629 1.38629
|
|
7246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7247 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
7248 1.38629 1.38629 1.38629 1.38629
|
|
7249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7250 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
7251 1.38629 1.38629 1.38629 1.38629
|
|
7252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7253 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
7254 1.38629 1.38629 1.38629 1.38629
|
|
7255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7256 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
7257 1.38629 1.38629 1.38629 1.38629
|
|
7258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7259 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
7260 1.38629 1.38629 1.38629 1.38629
|
|
7261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7262 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
|
|
7263 1.38629 1.38629 1.38629 1.38629
|
|
7264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7265 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
7266 1.38629 1.38629 1.38629 1.38629
|
|
7267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7268 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
|
|
7269 1.38629 1.38629 1.38629 1.38629
|
|
7270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7271 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
|
|
7272 1.38629 1.38629 1.38629 1.38629
|
|
7273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7274 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
|
|
7275 1.38629 1.38629 1.38629 1.38629
|
|
7276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7277 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
|
|
7278 1.38629 1.38629 1.38629 1.38629
|
|
7279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7280 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
|
|
7281 1.38629 1.38629 1.38629 1.38629
|
|
7282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7283 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
|
|
7284 1.38629 1.38629 1.38629 1.38629
|
|
7285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7286 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
|
|
7287 1.38629 1.38629 1.38629 1.38629
|
|
7288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7289 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
|
|
7290 1.38629 1.38629 1.38629 1.38629
|
|
7291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7292 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
|
|
7293 1.38629 1.38629 1.38629 1.38629
|
|
7294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7295 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
|
|
7296 1.38629 1.38629 1.38629 1.38629
|
|
7297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7298 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
|
|
7299 1.38629 1.38629 1.38629 1.38629
|
|
7300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7301 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
|
|
7302 1.38629 1.38629 1.38629 1.38629
|
|
7303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7304 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
7305 1.38629 1.38629 1.38629 1.38629
|
|
7306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7307 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
7308 1.38629 1.38629 1.38629 1.38629
|
|
7309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7310 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
7311 1.38629 1.38629 1.38629 1.38629
|
|
7312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7313 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
7314 1.38629 1.38629 1.38629 1.38629
|
|
7315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7316 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
|
|
7317 1.38629 1.38629 1.38629 1.38629
|
|
7318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7319 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
7320 1.38629 1.38629 1.38629 1.38629
|
|
7321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7322 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
|
|
7323 1.38629 1.38629 1.38629 1.38629
|
|
7324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7325 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
7326 1.38629 1.38629 1.38629 1.38629
|
|
7327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7328 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
|
|
7329 1.38629 1.38629 1.38629 1.38629
|
|
7330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7331 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
|
|
7332 1.38629 1.38629 1.38629 1.38629
|
|
7333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7334 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
|
|
7335 1.38629 1.38629 1.38629 1.38629
|
|
7336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7337 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
7338 1.38629 1.38629 1.38629 1.38629
|
|
7339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7340 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
7341 1.38629 1.38629 1.38629 1.38629
|
|
7342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7343 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
7344 1.38629 1.38629 1.38629 1.38629
|
|
7345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7346 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
7347 1.38629 1.38629 1.38629 1.38629
|
|
7348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7349 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
|
|
7350 1.38629 1.38629 1.38629 1.38629
|
|
7351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7352 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
|
|
7353 1.38629 1.38629 1.38629 1.38629
|
|
7354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7355 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
|
|
7356 1.38629 1.38629 1.38629 1.38629
|
|
7357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7358 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
|
|
7359 1.38629 1.38629 1.38629 1.38629
|
|
7360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7361 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
|
|
7362 1.38629 1.38629 1.38629 1.38629
|
|
7363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7364 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
7365 1.38629 1.38629 1.38629 1.38629
|
|
7366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7367 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
7368 1.38629 1.38629 1.38629 1.38629
|
|
7369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7370 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
|
|
7371 1.38629 1.38629 1.38629 1.38629
|
|
7372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7373 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
7374 1.38629 1.38629 1.38629 1.38629
|
|
7375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7376 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
|
|
7377 1.38629 1.38629 1.38629 1.38629
|
|
7378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7379 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
|
|
7380 1.38629 1.38629 1.38629 1.38629
|
|
7381 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7382 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
|
|
7383 1.38629 1.38629 1.38629 1.38629
|
|
7384 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7385 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
|
|
7386 1.38629 1.38629 1.38629 1.38629
|
|
7387 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7388 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
|
|
7389 1.38629 1.38629 1.38629 1.38629
|
|
7390 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7391 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
|
|
7392 1.38629 1.38629 1.38629 1.38629
|
|
7393 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7394 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
|
|
7395 1.38629 1.38629 1.38629 1.38629
|
|
7396 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
7397 //
|
|
7398 HMMER3/f [3.2.1 | June 2018]
|
|
7399 NAME long.31.aln
|
|
7400 LENG 70
|
|
7401 MAXL 160
|
|
7402 ALPH DNA
|
|
7403 RF no
|
|
7404 MM no
|
|
7405 CONS yes
|
|
7406 CS no
|
|
7407 MAP yes
|
|
7408 DATE Tue May 28 13:12:04 2019
|
|
7409 NSEQ 2
|
|
7410 EFFN 2.000000
|
|
7411 CKSUM 994513381
|
|
7412 STATS LOCAL MSV -8.5121 0.72207
|
|
7413 STATS LOCAL VITERBI -9.3704 0.72207
|
|
7414 STATS LOCAL FORWARD -3.5012 0.72207
|
|
7415 HMM A C G T
|
|
7416 m->m m->i m->d i->m i->i d->m d->d
|
|
7417 COMPO 1.95498 1.24900 1.45266 1.08562
|
|
7418 1.38629 1.38629 1.38629 1.38629
|
|
7419 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
7420 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
|
|
7421 1.38629 1.38629 1.38629 1.38629
|
|
7422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7423 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
|
|
7424 1.38629 1.38629 1.38629 1.38629
|
|
7425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7426 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
|
|
7427 1.38629 1.38629 1.38629 1.38629
|
|
7428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7429 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
|
|
7430 1.38629 1.38629 1.38629 1.38629
|
|
7431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7432 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
7433 1.38629 1.38629 1.38629 1.38629
|
|
7434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7435 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
|
|
7436 1.38629 1.38629 1.38629 1.38629
|
|
7437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7438 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
7439 1.38629 1.38629 1.38629 1.38629
|
|
7440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7441 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
|
|
7442 1.38629 1.38629 1.38629 1.38629
|
|
7443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7444 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
|
|
7445 1.38629 1.38629 1.38629 1.38629
|
|
7446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7447 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
|
|
7448 1.38629 1.38629 1.38629 1.38629
|
|
7449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7450 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
|
|
7451 1.38629 1.38629 1.38629 1.38629
|
|
7452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7453 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
7454 1.38629 1.38629 1.38629 1.38629
|
|
7455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7456 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
7457 1.38629 1.38629 1.38629 1.38629
|
|
7458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7459 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
7460 1.38629 1.38629 1.38629 1.38629
|
|
7461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7462 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
|
|
7463 1.38629 1.38629 1.38629 1.38629
|
|
7464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7465 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
7466 1.38629 1.38629 1.38629 1.38629
|
|
7467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7468 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
7469 1.38629 1.38629 1.38629 1.38629
|
|
7470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7471 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
7472 1.38629 1.38629 1.38629 1.38629
|
|
7473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7474 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
|
|
7475 1.38629 1.38629 1.38629 1.38629
|
|
7476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7477 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
7478 1.38629 1.38629 1.38629 1.38629
|
|
7479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7480 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
|
|
7481 1.38629 1.38629 1.38629 1.38629
|
|
7482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7483 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
|
|
7484 1.38629 1.38629 1.38629 1.38629
|
|
7485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7486 23 2.38910 2.82844 0.25233 2.62837 23 g - - -
|
|
7487 1.38629 1.38629 1.38629 1.38629
|
|
7488 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7489 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
|
|
7490 1.38629 1.38629 1.38629 1.38629
|
|
7491 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7492 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
7493 1.38629 1.38629 1.38629 1.38629
|
|
7494 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7495 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
7496 1.38629 1.38629 1.38629 1.38629
|
|
7497 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7498 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
|
|
7499 1.38629 1.38629 1.38629 1.38629
|
|
7500 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7501 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
|
|
7502 1.38629 1.38629 1.38629 1.38629
|
|
7503 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7504 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
7505 1.38629 1.38629 1.38629 1.38629
|
|
7506 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7507 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
|
|
7508 1.38629 1.38629 1.38629 1.38629
|
|
7509 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7510 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
|
|
7511 1.38629 1.38629 1.38629 1.38629
|
|
7512 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7513 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
7514 1.38629 1.38629 1.38629 1.38629
|
|
7515 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7516 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
|
|
7517 1.38629 1.38629 1.38629 1.38629
|
|
7518 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7519 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
7520 1.38629 1.38629 1.38629 1.38629
|
|
7521 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7522 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
|
|
7523 1.38629 1.38629 1.38629 1.38629
|
|
7524 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7525 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
|
|
7526 1.38629 1.38629 1.38629 1.38629
|
|
7527 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7528 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
|
|
7529 1.38629 1.38629 1.38629 1.38629
|
|
7530 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7531 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
|
|
7532 1.38629 1.38629 1.38629 1.38629
|
|
7533 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7534 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
|
|
7535 1.38629 1.38629 1.38629 1.38629
|
|
7536 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7537 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
7538 1.38629 1.38629 1.38629 1.38629
|
|
7539 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7540 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
7541 1.38629 1.38629 1.38629 1.38629
|
|
7542 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7543 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
|
|
7544 1.38629 1.38629 1.38629 1.38629
|
|
7545 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7546 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
|
|
7547 1.38629 1.38629 1.38629 1.38629
|
|
7548 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7549 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
7550 1.38629 1.38629 1.38629 1.38629
|
|
7551 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7552 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
|
|
7553 1.38629 1.38629 1.38629 1.38629
|
|
7554 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7555 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
7556 1.38629 1.38629 1.38629 1.38629
|
|
7557 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7558 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
|
|
7559 1.38629 1.38629 1.38629 1.38629
|
|
7560 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7561 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
|
|
7562 1.38629 1.38629 1.38629 1.38629
|
|
7563 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7564 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
|
|
7565 1.38629 1.38629 1.38629 1.38629
|
|
7566 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7567 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
7568 1.38629 1.38629 1.38629 1.38629
|
|
7569 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7570 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
|
|
7571 1.38629 1.38629 1.38629 1.38629
|
|
7572 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7573 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
|
|
7574 1.38629 1.38629 1.38629 1.38629
|
|
7575 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7576 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
|
|
7577 1.38629 1.38629 1.38629 1.38629
|
|
7578 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7579 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
|
|
7580 1.38629 1.38629 1.38629 1.38629
|
|
7581 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7582 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
|
|
7583 1.38629 1.38629 1.38629 1.38629
|
|
7584 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7585 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
7586 1.38629 1.38629 1.38629 1.38629
|
|
7587 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7588 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
|
|
7589 1.38629 1.38629 1.38629 1.38629
|
|
7590 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7591 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
|
|
7592 1.38629 1.38629 1.38629 1.38629
|
|
7593 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7594 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
|
|
7595 1.38629 1.38629 1.38629 1.38629
|
|
7596 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7597 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
|
|
7598 1.38629 1.38629 1.38629 1.38629
|
|
7599 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7600 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
|
|
7601 1.38629 1.38629 1.38629 1.38629
|
|
7602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7603 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
7604 1.38629 1.38629 1.38629 1.38629
|
|
7605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7606 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
|
|
7607 1.38629 1.38629 1.38629 1.38629
|
|
7608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7609 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
7610 1.38629 1.38629 1.38629 1.38629
|
|
7611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7612 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
|
|
7613 1.38629 1.38629 1.38629 1.38629
|
|
7614 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7615 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
7616 1.38629 1.38629 1.38629 1.38629
|
|
7617 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7618 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
7619 1.38629 1.38629 1.38629 1.38629
|
|
7620 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7621 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
|
|
7622 1.38629 1.38629 1.38629 1.38629
|
|
7623 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7624 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
|
|
7625 1.38629 1.38629 1.38629 1.38629
|
|
7626 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7627 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
7628 1.38629 1.38629 1.38629 1.38629
|
|
7629 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
7630 //
|
|
7631 HMMER3/f [3.2.1 | June 2018]
|
|
7632 NAME long.32.aln
|
|
7633 LENG 70
|
|
7634 MAXL 160
|
|
7635 ALPH DNA
|
|
7636 RF no
|
|
7637 MM no
|
|
7638 CONS yes
|
|
7639 CS no
|
|
7640 MAP yes
|
|
7641 DATE Tue May 28 13:12:02 2019
|
|
7642 NSEQ 2
|
|
7643 EFFN 2.000000
|
|
7644 CKSUM 2595042177
|
|
7645 STATS LOCAL MSV -8.2623 0.72196
|
|
7646 STATS LOCAL VITERBI -9.2330 0.72196
|
|
7647 STATS LOCAL FORWARD -3.2805 0.72196
|
|
7648 HMM A C G T
|
|
7649 m->m m->i m->d i->m i->i d->m d->d
|
|
7650 COMPO 1.34295 1.40503 1.75567 1.13702
|
|
7651 1.38629 1.38629 1.38629 1.38629
|
|
7652 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
7653 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
|
|
7654 1.38629 1.38629 1.38629 1.38629
|
|
7655 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7656 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
|
|
7657 1.38629 1.38629 1.38629 1.38629
|
|
7658 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7659 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
|
|
7660 1.38629 1.38629 1.38629 1.38629
|
|
7661 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7662 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
|
|
7663 1.38629 1.38629 1.38629 1.38629
|
|
7664 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7665 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
7666 1.38629 1.38629 1.38629 1.38629
|
|
7667 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7668 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
7669 1.38629 1.38629 1.38629 1.38629
|
|
7670 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7671 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
7672 1.38629 1.38629 1.38629 1.38629
|
|
7673 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7674 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
|
|
7675 1.38629 1.38629 1.38629 1.38629
|
|
7676 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7677 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
|
|
7678 1.38629 1.38629 1.38629 1.38629
|
|
7679 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7680 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
|
|
7681 1.38629 1.38629 1.38629 1.38629
|
|
7682 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7683 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
|
|
7684 1.38629 1.38629 1.38629 1.38629
|
|
7685 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7686 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
|
|
7687 1.38629 1.38629 1.38629 1.38629
|
|
7688 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7689 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
|
|
7690 1.38629 1.38629 1.38629 1.38629
|
|
7691 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7692 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
|
|
7693 1.38629 1.38629 1.38629 1.38629
|
|
7694 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7695 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
7696 1.38629 1.38629 1.38629 1.38629
|
|
7697 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7698 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
7699 1.38629 1.38629 1.38629 1.38629
|
|
7700 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7701 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
7702 1.38629 1.38629 1.38629 1.38629
|
|
7703 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7704 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
7705 1.38629 1.38629 1.38629 1.38629
|
|
7706 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7707 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
|
|
7708 1.38629 1.38629 1.38629 1.38629
|
|
7709 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7710 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
|
|
7711 1.38629 1.38629 1.38629 1.38629
|
|
7712 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7713 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
|
|
7714 1.38629 1.38629 1.38629 1.38629
|
|
7715 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7716 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
|
|
7717 1.38629 1.38629 1.38629 1.38629
|
|
7718 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7719 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
7720 1.38629 1.38629 1.38629 1.38629
|
|
7721 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7722 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
|
|
7723 1.38629 1.38629 1.38629 1.38629
|
|
7724 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7725 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
|
|
7726 1.38629 1.38629 1.38629 1.38629
|
|
7727 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7728 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
7729 1.38629 1.38629 1.38629 1.38629
|
|
7730 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7731 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
7732 1.38629 1.38629 1.38629 1.38629
|
|
7733 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7734 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
7735 1.38629 1.38629 1.38629 1.38629
|
|
7736 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7737 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
|
|
7738 1.38629 1.38629 1.38629 1.38629
|
|
7739 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7740 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
|
|
7741 1.38629 1.38629 1.38629 1.38629
|
|
7742 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7743 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
|
|
7744 1.38629 1.38629 1.38629 1.38629
|
|
7745 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7746 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
7747 1.38629 1.38629 1.38629 1.38629
|
|
7748 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7749 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
|
|
7750 1.38629 1.38629 1.38629 1.38629
|
|
7751 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7752 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
7753 1.38629 1.38629 1.38629 1.38629
|
|
7754 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7755 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
7756 1.38629 1.38629 1.38629 1.38629
|
|
7757 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7758 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
|
|
7759 1.38629 1.38629 1.38629 1.38629
|
|
7760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7761 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
7762 1.38629 1.38629 1.38629 1.38629
|
|
7763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7764 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
7765 1.38629 1.38629 1.38629 1.38629
|
|
7766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7767 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
|
|
7768 1.38629 1.38629 1.38629 1.38629
|
|
7769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7770 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
7771 1.38629 1.38629 1.38629 1.38629
|
|
7772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7773 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
7774 1.38629 1.38629 1.38629 1.38629
|
|
7775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7776 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
|
|
7777 1.38629 1.38629 1.38629 1.38629
|
|
7778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7779 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
7780 1.38629 1.38629 1.38629 1.38629
|
|
7781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7782 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
7783 1.38629 1.38629 1.38629 1.38629
|
|
7784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7785 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
|
|
7786 1.38629 1.38629 1.38629 1.38629
|
|
7787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7788 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
|
|
7789 1.38629 1.38629 1.38629 1.38629
|
|
7790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7791 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
|
|
7792 1.38629 1.38629 1.38629 1.38629
|
|
7793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7794 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
|
|
7795 1.38629 1.38629 1.38629 1.38629
|
|
7796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7797 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
|
|
7798 1.38629 1.38629 1.38629 1.38629
|
|
7799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7800 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
7801 1.38629 1.38629 1.38629 1.38629
|
|
7802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7803 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
7804 1.38629 1.38629 1.38629 1.38629
|
|
7805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7806 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
7807 1.38629 1.38629 1.38629 1.38629
|
|
7808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7809 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
7810 1.38629 1.38629 1.38629 1.38629
|
|
7811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7812 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
|
|
7813 1.38629 1.38629 1.38629 1.38629
|
|
7814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7815 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
|
|
7816 1.38629 1.38629 1.38629 1.38629
|
|
7817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7818 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
7819 1.38629 1.38629 1.38629 1.38629
|
|
7820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7821 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
|
|
7822 1.38629 1.38629 1.38629 1.38629
|
|
7823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7824 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
|
|
7825 1.38629 1.38629 1.38629 1.38629
|
|
7826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7827 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
|
|
7828 1.38629 1.38629 1.38629 1.38629
|
|
7829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7830 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
|
|
7831 1.38629 1.38629 1.38629 1.38629
|
|
7832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7833 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
7834 1.38629 1.38629 1.38629 1.38629
|
|
7835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7836 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
|
|
7837 1.38629 1.38629 1.38629 1.38629
|
|
7838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7839 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
|
|
7840 1.38629 1.38629 1.38629 1.38629
|
|
7841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7842 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
7843 1.38629 1.38629 1.38629 1.38629
|
|
7844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7845 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
7846 1.38629 1.38629 1.38629 1.38629
|
|
7847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7848 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
|
|
7849 1.38629 1.38629 1.38629 1.38629
|
|
7850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7851 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
|
|
7852 1.38629 1.38629 1.38629 1.38629
|
|
7853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7854 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
|
|
7855 1.38629 1.38629 1.38629 1.38629
|
|
7856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7857 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
7858 1.38629 1.38629 1.38629 1.38629
|
|
7859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7860 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
7861 1.38629 1.38629 1.38629 1.38629
|
|
7862 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
7863 //
|
|
7864 HMMER3/f [3.2.1 | June 2018]
|
|
7865 NAME long.33.aln
|
|
7866 LENG 70
|
|
7867 MAXL 160
|
|
7868 ALPH DNA
|
|
7869 RF no
|
|
7870 MM no
|
|
7871 CONS yes
|
|
7872 CS no
|
|
7873 MAP yes
|
|
7874 DATE Tue May 28 13:12:03 2019
|
|
7875 NSEQ 2
|
|
7876 EFFN 2.000000
|
|
7877 CKSUM 2524839615
|
|
7878 STATS LOCAL MSV -8.0121 0.72159
|
|
7879 STATS LOCAL VITERBI -9.2643 0.72159
|
|
7880 STATS LOCAL FORWARD -3.5930 0.72159
|
|
7881 HMM A C G T
|
|
7882 m->m m->i m->d i->m i->i d->m d->d
|
|
7883 COMPO 1.41710 1.20864 1.66398 1.31083
|
|
7884 1.38629 1.38629 1.38629 1.38629
|
|
7885 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
7886 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
7887 1.38629 1.38629 1.38629 1.38629
|
|
7888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7889 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
|
|
7890 1.38629 1.38629 1.38629 1.38629
|
|
7891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7892 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
|
|
7893 1.38629 1.38629 1.38629 1.38629
|
|
7894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7895 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
|
|
7896 1.38629 1.38629 1.38629 1.38629
|
|
7897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7898 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
|
|
7899 1.38629 1.38629 1.38629 1.38629
|
|
7900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7901 6 2.46232 0.33808 2.58153 2.07174 6 c - - -
|
|
7902 1.38629 1.38629 1.38629 1.38629
|
|
7903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7904 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
7905 1.38629 1.38629 1.38629 1.38629
|
|
7906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7907 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
|
|
7908 1.38629 1.38629 1.38629 1.38629
|
|
7909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7910 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
|
|
7911 1.38629 1.38629 1.38629 1.38629
|
|
7912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7913 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
|
|
7914 1.38629 1.38629 1.38629 1.38629
|
|
7915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7916 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
7917 1.38629 1.38629 1.38629 1.38629
|
|
7918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7919 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
|
|
7920 1.38629 1.38629 1.38629 1.38629
|
|
7921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7922 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
|
|
7923 1.38629 1.38629 1.38629 1.38629
|
|
7924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7925 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
|
|
7926 1.38629 1.38629 1.38629 1.38629
|
|
7927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7928 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
|
|
7929 1.38629 1.38629 1.38629 1.38629
|
|
7930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7931 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
|
|
7932 1.38629 1.38629 1.38629 1.38629
|
|
7933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7934 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
|
|
7935 1.38629 1.38629 1.38629 1.38629
|
|
7936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7937 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
|
|
7938 1.38629 1.38629 1.38629 1.38629
|
|
7939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7940 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
7941 1.38629 1.38629 1.38629 1.38629
|
|
7942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7943 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
|
|
7944 1.38629 1.38629 1.38629 1.38629
|
|
7945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7946 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
|
|
7947 1.38629 1.38629 1.38629 1.38629
|
|
7948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7949 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
|
|
7950 1.38629 1.38629 1.38629 1.38629
|
|
7951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7952 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
7953 1.38629 1.38629 1.38629 1.38629
|
|
7954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7955 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
|
|
7956 1.38629 1.38629 1.38629 1.38629
|
|
7957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7958 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
|
|
7959 1.38629 1.38629 1.38629 1.38629
|
|
7960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7961 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
|
|
7962 1.38629 1.38629 1.38629 1.38629
|
|
7963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7964 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
7965 1.38629 1.38629 1.38629 1.38629
|
|
7966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7967 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
7968 1.38629 1.38629 1.38629 1.38629
|
|
7969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7970 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
|
|
7971 1.38629 1.38629 1.38629 1.38629
|
|
7972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7973 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
|
|
7974 1.38629 1.38629 1.38629 1.38629
|
|
7975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7976 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
|
|
7977 1.38629 1.38629 1.38629 1.38629
|
|
7978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7979 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
|
|
7980 1.38629 1.38629 1.38629 1.38629
|
|
7981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7982 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
7983 1.38629 1.38629 1.38629 1.38629
|
|
7984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7985 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
7986 1.38629 1.38629 1.38629 1.38629
|
|
7987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7988 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
|
|
7989 1.38629 1.38629 1.38629 1.38629
|
|
7990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7991 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
|
|
7992 1.38629 1.38629 1.38629 1.38629
|
|
7993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7994 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
|
|
7995 1.38629 1.38629 1.38629 1.38629
|
|
7996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7997 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
|
|
7998 1.38629 1.38629 1.38629 1.38629
|
|
7999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8000 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
8001 1.38629 1.38629 1.38629 1.38629
|
|
8002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8003 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
8004 1.38629 1.38629 1.38629 1.38629
|
|
8005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8006 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
|
|
8007 1.38629 1.38629 1.38629 1.38629
|
|
8008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8009 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
|
|
8010 1.38629 1.38629 1.38629 1.38629
|
|
8011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8012 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
|
|
8013 1.38629 1.38629 1.38629 1.38629
|
|
8014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8015 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
|
|
8016 1.38629 1.38629 1.38629 1.38629
|
|
8017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8018 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
8019 1.38629 1.38629 1.38629 1.38629
|
|
8020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8021 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
8022 1.38629 1.38629 1.38629 1.38629
|
|
8023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8024 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
|
|
8025 1.38629 1.38629 1.38629 1.38629
|
|
8026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8027 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
|
|
8028 1.38629 1.38629 1.38629 1.38629
|
|
8029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8030 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
|
|
8031 1.38629 1.38629 1.38629 1.38629
|
|
8032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8033 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
|
|
8034 1.38629 1.38629 1.38629 1.38629
|
|
8035 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8036 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
8037 1.38629 1.38629 1.38629 1.38629
|
|
8038 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8039 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
|
|
8040 1.38629 1.38629 1.38629 1.38629
|
|
8041 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8042 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
8043 1.38629 1.38629 1.38629 1.38629
|
|
8044 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8045 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
|
|
8046 1.38629 1.38629 1.38629 1.38629
|
|
8047 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8048 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
8049 1.38629 1.38629 1.38629 1.38629
|
|
8050 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8051 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
|
|
8052 1.38629 1.38629 1.38629 1.38629
|
|
8053 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8054 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
|
|
8055 1.38629 1.38629 1.38629 1.38629
|
|
8056 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8057 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
8058 1.38629 1.38629 1.38629 1.38629
|
|
8059 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8060 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
|
|
8061 1.38629 1.38629 1.38629 1.38629
|
|
8062 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8063 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
8064 1.38629 1.38629 1.38629 1.38629
|
|
8065 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8066 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
8067 1.38629 1.38629 1.38629 1.38629
|
|
8068 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8069 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
8070 1.38629 1.38629 1.38629 1.38629
|
|
8071 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8072 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
|
|
8073 1.38629 1.38629 1.38629 1.38629
|
|
8074 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8075 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
8076 1.38629 1.38629 1.38629 1.38629
|
|
8077 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8078 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
|
|
8079 1.38629 1.38629 1.38629 1.38629
|
|
8080 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8081 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
|
|
8082 1.38629 1.38629 1.38629 1.38629
|
|
8083 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8084 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
|
|
8085 1.38629 1.38629 1.38629 1.38629
|
|
8086 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8087 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
|
|
8088 1.38629 1.38629 1.38629 1.38629
|
|
8089 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8090 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
8091 1.38629 1.38629 1.38629 1.38629
|
|
8092 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8093 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
|
|
8094 1.38629 1.38629 1.38629 1.38629
|
|
8095 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
8096 //
|
|
8097 HMMER3/f [3.2.1 | June 2018]
|
|
8098 NAME long.34.aln
|
|
8099 LENG 70
|
|
8100 MAXL 160
|
|
8101 ALPH DNA
|
|
8102 RF no
|
|
8103 MM no
|
|
8104 CONS yes
|
|
8105 CS no
|
|
8106 MAP yes
|
|
8107 DATE Tue May 28 13:12:03 2019
|
|
8108 NSEQ 2
|
|
8109 EFFN 2.000000
|
|
8110 CKSUM 195830549
|
|
8111 STATS LOCAL MSV -8.1832 0.72173
|
|
8112 STATS LOCAL VITERBI -9.2304 0.72173
|
|
8113 STATS LOCAL FORWARD -3.8439 0.72173
|
|
8114 HMM A C G T
|
|
8115 m->m m->i m->d i->m i->i d->m d->d
|
|
8116 COMPO 1.34375 1.47628 1.65579 1.14035
|
|
8117 1.38629 1.38629 1.38629 1.38629
|
|
8118 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
8119 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
8120 1.38629 1.38629 1.38629 1.38629
|
|
8121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8122 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
|
|
8123 1.38629 1.38629 1.38629 1.38629
|
|
8124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8125 3 2.38910 2.82844 0.25233 2.62837 3 g - - -
|
|
8126 1.38629 1.38629 1.38629 1.38629
|
|
8127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8128 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
|
|
8129 1.38629 1.38629 1.38629 1.38629
|
|
8130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8131 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
8132 1.38629 1.38629 1.38629 1.38629
|
|
8133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8134 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
|
|
8135 1.38629 1.38629 1.38629 1.38629
|
|
8136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8137 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
8138 1.38629 1.38629 1.38629 1.38629
|
|
8139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8140 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
|
|
8141 1.38629 1.38629 1.38629 1.38629
|
|
8142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8143 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
8144 1.38629 1.38629 1.38629 1.38629
|
|
8145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8146 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
|
|
8147 1.38629 1.38629 1.38629 1.38629
|
|
8148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8149 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
8150 1.38629 1.38629 1.38629 1.38629
|
|
8151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8152 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
|
|
8153 1.38629 1.38629 1.38629 1.38629
|
|
8154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8155 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
8156 1.38629 1.38629 1.38629 1.38629
|
|
8157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8158 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
8159 1.38629 1.38629 1.38629 1.38629
|
|
8160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8161 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
|
|
8162 1.38629 1.38629 1.38629 1.38629
|
|
8163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8164 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
|
|
8165 1.38629 1.38629 1.38629 1.38629
|
|
8166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8167 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
8168 1.38629 1.38629 1.38629 1.38629
|
|
8169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8170 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
8171 1.38629 1.38629 1.38629 1.38629
|
|
8172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8173 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
8174 1.38629 1.38629 1.38629 1.38629
|
|
8175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8176 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
8177 1.38629 1.38629 1.38629 1.38629
|
|
8178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8179 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
8180 1.38629 1.38629 1.38629 1.38629
|
|
8181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8182 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
|
|
8183 1.38629 1.38629 1.38629 1.38629
|
|
8184 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8185 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
|
|
8186 1.38629 1.38629 1.38629 1.38629
|
|
8187 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8188 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
8189 1.38629 1.38629 1.38629 1.38629
|
|
8190 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8191 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
8192 1.38629 1.38629 1.38629 1.38629
|
|
8193 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8194 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
|
|
8195 1.38629 1.38629 1.38629 1.38629
|
|
8196 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8197 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
8198 1.38629 1.38629 1.38629 1.38629
|
|
8199 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8200 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
8201 1.38629 1.38629 1.38629 1.38629
|
|
8202 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8203 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
8204 1.38629 1.38629 1.38629 1.38629
|
|
8205 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8206 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
|
|
8207 1.38629 1.38629 1.38629 1.38629
|
|
8208 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8209 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
8210 1.38629 1.38629 1.38629 1.38629
|
|
8211 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8212 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
8213 1.38629 1.38629 1.38629 1.38629
|
|
8214 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8215 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
8216 1.38629 1.38629 1.38629 1.38629
|
|
8217 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8218 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
|
|
8219 1.38629 1.38629 1.38629 1.38629
|
|
8220 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8221 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
8222 1.38629 1.38629 1.38629 1.38629
|
|
8223 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8224 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
8225 1.38629 1.38629 1.38629 1.38629
|
|
8226 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8227 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
|
|
8228 1.38629 1.38629 1.38629 1.38629
|
|
8229 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8230 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
|
|
8231 1.38629 1.38629 1.38629 1.38629
|
|
8232 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8233 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
8234 1.38629 1.38629 1.38629 1.38629
|
|
8235 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8236 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
8237 1.38629 1.38629 1.38629 1.38629
|
|
8238 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8239 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
|
|
8240 1.38629 1.38629 1.38629 1.38629
|
|
8241 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8242 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
|
|
8243 1.38629 1.38629 1.38629 1.38629
|
|
8244 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8245 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
8246 1.38629 1.38629 1.38629 1.38629
|
|
8247 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8248 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
|
|
8249 1.38629 1.38629 1.38629 1.38629
|
|
8250 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8251 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
|
|
8252 1.38629 1.38629 1.38629 1.38629
|
|
8253 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8254 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
|
|
8255 1.38629 1.38629 1.38629 1.38629
|
|
8256 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8257 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
|
|
8258 1.38629 1.38629 1.38629 1.38629
|
|
8259 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8260 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
|
|
8261 1.38629 1.38629 1.38629 1.38629
|
|
8262 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8263 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
|
|
8264 1.38629 1.38629 1.38629 1.38629
|
|
8265 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8266 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
8267 1.38629 1.38629 1.38629 1.38629
|
|
8268 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8269 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
8270 1.38629 1.38629 1.38629 1.38629
|
|
8271 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8272 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
8273 1.38629 1.38629 1.38629 1.38629
|
|
8274 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8275 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
|
|
8276 1.38629 1.38629 1.38629 1.38629
|
|
8277 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8278 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
8279 1.38629 1.38629 1.38629 1.38629
|
|
8280 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8281 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
|
|
8282 1.38629 1.38629 1.38629 1.38629
|
|
8283 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8284 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
8285 1.38629 1.38629 1.38629 1.38629
|
|
8286 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8287 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
|
|
8288 1.38629 1.38629 1.38629 1.38629
|
|
8289 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8290 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
|
|
8291 1.38629 1.38629 1.38629 1.38629
|
|
8292 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8293 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
8294 1.38629 1.38629 1.38629 1.38629
|
|
8295 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8296 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
|
|
8297 1.38629 1.38629 1.38629 1.38629
|
|
8298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8299 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
8300 1.38629 1.38629 1.38629 1.38629
|
|
8301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8302 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
8303 1.38629 1.38629 1.38629 1.38629
|
|
8304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8305 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
8306 1.38629 1.38629 1.38629 1.38629
|
|
8307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8308 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
8309 1.38629 1.38629 1.38629 1.38629
|
|
8310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8311 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
8312 1.38629 1.38629 1.38629 1.38629
|
|
8313 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8314 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
8315 1.38629 1.38629 1.38629 1.38629
|
|
8316 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8317 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
|
|
8318 1.38629 1.38629 1.38629 1.38629
|
|
8319 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8320 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
|
|
8321 1.38629 1.38629 1.38629 1.38629
|
|
8322 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8323 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
8324 1.38629 1.38629 1.38629 1.38629
|
|
8325 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8326 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
|
|
8327 1.38629 1.38629 1.38629 1.38629
|
|
8328 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
8329 //
|
|
8330 HMMER3/f [3.2.1 | June 2018]
|
|
8331 NAME long.35.aln
|
|
8332 LENG 70
|
|
8333 MAXL 160
|
|
8334 ALPH DNA
|
|
8335 RF no
|
|
8336 MM no
|
|
8337 CONS yes
|
|
8338 CS no
|
|
8339 MAP yes
|
|
8340 DATE Tue May 28 13:12:04 2019
|
|
8341 NSEQ 2
|
|
8342 EFFN 2.000000
|
|
8343 CKSUM 1613446834
|
|
8344 STATS LOCAL MSV -7.8105 0.72031
|
|
8345 STATS LOCAL VITERBI -9.1594 0.72031
|
|
8346 STATS LOCAL FORWARD -3.0929 0.72031
|
|
8347 HMM A C G T
|
|
8348 m->m m->i m->d i->m i->i d->m d->d
|
|
8349 COMPO 0.94738 1.59256 1.61110 1.56461
|
|
8350 1.38629 1.38629 1.38629 1.38629
|
|
8351 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
8352 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
|
|
8353 1.38629 1.38629 1.38629 1.38629
|
|
8354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8355 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
|
|
8356 1.38629 1.38629 1.38629 1.38629
|
|
8357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8358 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
|
|
8359 1.38629 1.38629 1.38629 1.38629
|
|
8360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8361 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
|
|
8362 1.38629 1.38629 1.38629 1.38629
|
|
8363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8364 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
|
|
8365 1.38629 1.38629 1.38629 1.38629
|
|
8366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8367 6 2.46232 0.33808 2.58153 2.07174 6 c - - -
|
|
8368 1.38629 1.38629 1.38629 1.38629
|
|
8369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8370 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
|
|
8371 1.38629 1.38629 1.38629 1.38629
|
|
8372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8373 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
|
|
8374 1.38629 1.38629 1.38629 1.38629
|
|
8375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8376 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
8377 1.38629 1.38629 1.38629 1.38629
|
|
8378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8379 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
|
|
8380 1.38629 1.38629 1.38629 1.38629
|
|
8381 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8382 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
|
|
8383 1.38629 1.38629 1.38629 1.38629
|
|
8384 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8385 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
8386 1.38629 1.38629 1.38629 1.38629
|
|
8387 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8388 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
|
|
8389 1.38629 1.38629 1.38629 1.38629
|
|
8390 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8391 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
|
|
8392 1.38629 1.38629 1.38629 1.38629
|
|
8393 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8394 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
|
|
8395 1.38629 1.38629 1.38629 1.38629
|
|
8396 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8397 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
8398 1.38629 1.38629 1.38629 1.38629
|
|
8399 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8400 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
8401 1.38629 1.38629 1.38629 1.38629
|
|
8402 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8403 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
8404 1.38629 1.38629 1.38629 1.38629
|
|
8405 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8406 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
|
|
8407 1.38629 1.38629 1.38629 1.38629
|
|
8408 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8409 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
8410 1.38629 1.38629 1.38629 1.38629
|
|
8411 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8412 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
8413 1.38629 1.38629 1.38629 1.38629
|
|
8414 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8415 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
8416 1.38629 1.38629 1.38629 1.38629
|
|
8417 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8418 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
8419 1.38629 1.38629 1.38629 1.38629
|
|
8420 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8421 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
8422 1.38629 1.38629 1.38629 1.38629
|
|
8423 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8424 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
|
|
8425 1.38629 1.38629 1.38629 1.38629
|
|
8426 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8427 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
|
|
8428 1.38629 1.38629 1.38629 1.38629
|
|
8429 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8430 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
|
|
8431 1.38629 1.38629 1.38629 1.38629
|
|
8432 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8433 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
|
|
8434 1.38629 1.38629 1.38629 1.38629
|
|
8435 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8436 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
|
|
8437 1.38629 1.38629 1.38629 1.38629
|
|
8438 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8439 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
|
|
8440 1.38629 1.38629 1.38629 1.38629
|
|
8441 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8442 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
|
|
8443 1.38629 1.38629 1.38629 1.38629
|
|
8444 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8445 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
8446 1.38629 1.38629 1.38629 1.38629
|
|
8447 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8448 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
|
|
8449 1.38629 1.38629 1.38629 1.38629
|
|
8450 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8451 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
8452 1.38629 1.38629 1.38629 1.38629
|
|
8453 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8454 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
|
|
8455 1.38629 1.38629 1.38629 1.38629
|
|
8456 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8457 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
8458 1.38629 1.38629 1.38629 1.38629
|
|
8459 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8460 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
|
|
8461 1.38629 1.38629 1.38629 1.38629
|
|
8462 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8463 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
|
|
8464 1.38629 1.38629 1.38629 1.38629
|
|
8465 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8466 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
8467 1.38629 1.38629 1.38629 1.38629
|
|
8468 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8469 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
8470 1.38629 1.38629 1.38629 1.38629
|
|
8471 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8472 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
|
|
8473 1.38629 1.38629 1.38629 1.38629
|
|
8474 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8475 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
8476 1.38629 1.38629 1.38629 1.38629
|
|
8477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8478 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
8479 1.38629 1.38629 1.38629 1.38629
|
|
8480 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8481 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
8482 1.38629 1.38629 1.38629 1.38629
|
|
8483 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8484 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
|
|
8485 1.38629 1.38629 1.38629 1.38629
|
|
8486 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8487 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
|
|
8488 1.38629 1.38629 1.38629 1.38629
|
|
8489 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8490 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
8491 1.38629 1.38629 1.38629 1.38629
|
|
8492 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8493 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
|
|
8494 1.38629 1.38629 1.38629 1.38629
|
|
8495 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8496 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
|
|
8497 1.38629 1.38629 1.38629 1.38629
|
|
8498 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8499 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
8500 1.38629 1.38629 1.38629 1.38629
|
|
8501 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8502 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
|
|
8503 1.38629 1.38629 1.38629 1.38629
|
|
8504 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8505 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
|
|
8506 1.38629 1.38629 1.38629 1.38629
|
|
8507 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8508 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
|
|
8509 1.38629 1.38629 1.38629 1.38629
|
|
8510 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8511 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
|
|
8512 1.38629 1.38629 1.38629 1.38629
|
|
8513 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8514 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
8515 1.38629 1.38629 1.38629 1.38629
|
|
8516 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8517 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
8518 1.38629 1.38629 1.38629 1.38629
|
|
8519 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8520 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
|
|
8521 1.38629 1.38629 1.38629 1.38629
|
|
8522 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8523 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
|
|
8524 1.38629 1.38629 1.38629 1.38629
|
|
8525 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8526 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
8527 1.38629 1.38629 1.38629 1.38629
|
|
8528 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8529 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
8530 1.38629 1.38629 1.38629 1.38629
|
|
8531 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8532 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
8533 1.38629 1.38629 1.38629 1.38629
|
|
8534 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8535 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
8536 1.38629 1.38629 1.38629 1.38629
|
|
8537 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8538 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
|
|
8539 1.38629 1.38629 1.38629 1.38629
|
|
8540 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8541 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
|
|
8542 1.38629 1.38629 1.38629 1.38629
|
|
8543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8544 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
8545 1.38629 1.38629 1.38629 1.38629
|
|
8546 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8547 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
|
|
8548 1.38629 1.38629 1.38629 1.38629
|
|
8549 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8550 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
|
|
8551 1.38629 1.38629 1.38629 1.38629
|
|
8552 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8553 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
|
|
8554 1.38629 1.38629 1.38629 1.38629
|
|
8555 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8556 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
8557 1.38629 1.38629 1.38629 1.38629
|
|
8558 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8559 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
8560 1.38629 1.38629 1.38629 1.38629
|
|
8561 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
8562 //
|
|
8563 HMMER3/f [3.2.1 | June 2018]
|
|
8564 NAME long.36.aln
|
|
8565 LENG 70
|
|
8566 MAXL 160
|
|
8567 ALPH DNA
|
|
8568 RF no
|
|
8569 MM no
|
|
8570 CONS yes
|
|
8571 CS no
|
|
8572 MAP yes
|
|
8573 DATE Tue May 28 13:12:04 2019
|
|
8574 NSEQ 2
|
|
8575 EFFN 2.000000
|
|
8576 CKSUM 1016574008
|
|
8577 STATS LOCAL MSV -8.2092 0.72204
|
|
8578 STATS LOCAL VITERBI -9.4140 0.72204
|
|
8579 STATS LOCAL FORWARD -3.0300 0.72204
|
|
8580 HMM A C G T
|
|
8581 m->m m->i m->d i->m i->i d->m d->d
|
|
8582 COMPO 1.41176 1.31197 1.75905 1.15585
|
|
8583 1.38629 1.38629 1.38629 1.38629
|
|
8584 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
8585 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
8586 1.38629 1.38629 1.38629 1.38629
|
|
8587 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8588 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
|
|
8589 1.38629 1.38629 1.38629 1.38629
|
|
8590 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8591 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
|
|
8592 1.38629 1.38629 1.38629 1.38629
|
|
8593 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8594 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
|
|
8595 1.38629 1.38629 1.38629 1.38629
|
|
8596 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8597 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
|
|
8598 1.38629 1.38629 1.38629 1.38629
|
|
8599 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8600 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
8601 1.38629 1.38629 1.38629 1.38629
|
|
8602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8603 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
|
|
8604 1.38629 1.38629 1.38629 1.38629
|
|
8605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8606 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
8607 1.38629 1.38629 1.38629 1.38629
|
|
8608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8609 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
|
|
8610 1.38629 1.38629 1.38629 1.38629
|
|
8611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8612 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
|
|
8613 1.38629 1.38629 1.38629 1.38629
|
|
8614 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8615 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
8616 1.38629 1.38629 1.38629 1.38629
|
|
8617 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8618 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
8619 1.38629 1.38629 1.38629 1.38629
|
|
8620 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8621 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
|
|
8622 1.38629 1.38629 1.38629 1.38629
|
|
8623 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8624 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
8625 1.38629 1.38629 1.38629 1.38629
|
|
8626 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8627 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
8628 1.38629 1.38629 1.38629 1.38629
|
|
8629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8630 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
8631 1.38629 1.38629 1.38629 1.38629
|
|
8632 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8633 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
8634 1.38629 1.38629 1.38629 1.38629
|
|
8635 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8636 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
|
|
8637 1.38629 1.38629 1.38629 1.38629
|
|
8638 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8639 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
8640 1.38629 1.38629 1.38629 1.38629
|
|
8641 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8642 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
8643 1.38629 1.38629 1.38629 1.38629
|
|
8644 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8645 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
|
|
8646 1.38629 1.38629 1.38629 1.38629
|
|
8647 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8648 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
|
|
8649 1.38629 1.38629 1.38629 1.38629
|
|
8650 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8651 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
|
|
8652 1.38629 1.38629 1.38629 1.38629
|
|
8653 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8654 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
|
|
8655 1.38629 1.38629 1.38629 1.38629
|
|
8656 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8657 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
|
|
8658 1.38629 1.38629 1.38629 1.38629
|
|
8659 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8660 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
8661 1.38629 1.38629 1.38629 1.38629
|
|
8662 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8663 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
|
|
8664 1.38629 1.38629 1.38629 1.38629
|
|
8665 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8666 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
8667 1.38629 1.38629 1.38629 1.38629
|
|
8668 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8669 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
|
|
8670 1.38629 1.38629 1.38629 1.38629
|
|
8671 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8672 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
|
|
8673 1.38629 1.38629 1.38629 1.38629
|
|
8674 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8675 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
8676 1.38629 1.38629 1.38629 1.38629
|
|
8677 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8678 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
8679 1.38629 1.38629 1.38629 1.38629
|
|
8680 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8681 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
|
|
8682 1.38629 1.38629 1.38629 1.38629
|
|
8683 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8684 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
8685 1.38629 1.38629 1.38629 1.38629
|
|
8686 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8687 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
|
|
8688 1.38629 1.38629 1.38629 1.38629
|
|
8689 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8690 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
|
|
8691 1.38629 1.38629 1.38629 1.38629
|
|
8692 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8693 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
8694 1.38629 1.38629 1.38629 1.38629
|
|
8695 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8696 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
|
|
8697 1.38629 1.38629 1.38629 1.38629
|
|
8698 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8699 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
|
|
8700 1.38629 1.38629 1.38629 1.38629
|
|
8701 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8702 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
8703 1.38629 1.38629 1.38629 1.38629
|
|
8704 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8705 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
|
|
8706 1.38629 1.38629 1.38629 1.38629
|
|
8707 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8708 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
|
|
8709 1.38629 1.38629 1.38629 1.38629
|
|
8710 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8711 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
8712 1.38629 1.38629 1.38629 1.38629
|
|
8713 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8714 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
|
|
8715 1.38629 1.38629 1.38629 1.38629
|
|
8716 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8717 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
|
|
8718 1.38629 1.38629 1.38629 1.38629
|
|
8719 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8720 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
|
|
8721 1.38629 1.38629 1.38629 1.38629
|
|
8722 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8723 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
|
|
8724 1.38629 1.38629 1.38629 1.38629
|
|
8725 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8726 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
|
|
8727 1.38629 1.38629 1.38629 1.38629
|
|
8728 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8729 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
|
|
8730 1.38629 1.38629 1.38629 1.38629
|
|
8731 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8732 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
8733 1.38629 1.38629 1.38629 1.38629
|
|
8734 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8735 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
8736 1.38629 1.38629 1.38629 1.38629
|
|
8737 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8738 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
|
|
8739 1.38629 1.38629 1.38629 1.38629
|
|
8740 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8741 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
|
|
8742 1.38629 1.38629 1.38629 1.38629
|
|
8743 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8744 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
|
|
8745 1.38629 1.38629 1.38629 1.38629
|
|
8746 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8747 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
8748 1.38629 1.38629 1.38629 1.38629
|
|
8749 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8750 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
|
|
8751 1.38629 1.38629 1.38629 1.38629
|
|
8752 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8753 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
|
|
8754 1.38629 1.38629 1.38629 1.38629
|
|
8755 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8756 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
|
|
8757 1.38629 1.38629 1.38629 1.38629
|
|
8758 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8759 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
8760 1.38629 1.38629 1.38629 1.38629
|
|
8761 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8762 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
8763 1.38629 1.38629 1.38629 1.38629
|
|
8764 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8765 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
8766 1.38629 1.38629 1.38629 1.38629
|
|
8767 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8768 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
|
|
8769 1.38629 1.38629 1.38629 1.38629
|
|
8770 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8771 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
8772 1.38629 1.38629 1.38629 1.38629
|
|
8773 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8774 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
8775 1.38629 1.38629 1.38629 1.38629
|
|
8776 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8777 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
|
|
8778 1.38629 1.38629 1.38629 1.38629
|
|
8779 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8780 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
|
|
8781 1.38629 1.38629 1.38629 1.38629
|
|
8782 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8783 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
|
|
8784 1.38629 1.38629 1.38629 1.38629
|
|
8785 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8786 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
|
|
8787 1.38629 1.38629 1.38629 1.38629
|
|
8788 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8789 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
|
|
8790 1.38629 1.38629 1.38629 1.38629
|
|
8791 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8792 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
|
|
8793 1.38629 1.38629 1.38629 1.38629
|
|
8794 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
8795 //
|
|
8796 HMMER3/f [3.2.1 | June 2018]
|
|
8797 NAME long.37.aln
|
|
8798 LENG 70
|
|
8799 MAXL 160
|
|
8800 ALPH DNA
|
|
8801 RF no
|
|
8802 MM no
|
|
8803 CONS yes
|
|
8804 CS no
|
|
8805 MAP yes
|
|
8806 DATE Tue May 28 13:12:04 2019
|
|
8807 NSEQ 2
|
|
8808 EFFN 2.000000
|
|
8809 CKSUM 1060708763
|
|
8810 STATS LOCAL MSV -8.1362 0.72159
|
|
8811 STATS LOCAL VITERBI -9.1995 0.72159
|
|
8812 STATS LOCAL FORWARD -3.7336 0.72159
|
|
8813 HMM A C G T
|
|
8814 m->m m->i m->d i->m i->i d->m d->d
|
|
8815 COMPO 1.34496 1.34940 1.66131 1.23731
|
|
8816 1.38629 1.38629 1.38629 1.38629
|
|
8817 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
8818 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
|
|
8819 1.38629 1.38629 1.38629 1.38629
|
|
8820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8821 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
|
|
8822 1.38629 1.38629 1.38629 1.38629
|
|
8823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8824 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
|
|
8825 1.38629 1.38629 1.38629 1.38629
|
|
8826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8827 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
|
|
8828 1.38629 1.38629 1.38629 1.38629
|
|
8829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8830 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
8831 1.38629 1.38629 1.38629 1.38629
|
|
8832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8833 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
8834 1.38629 1.38629 1.38629 1.38629
|
|
8835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8836 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
|
|
8837 1.38629 1.38629 1.38629 1.38629
|
|
8838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8839 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
8840 1.38629 1.38629 1.38629 1.38629
|
|
8841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8842 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
|
|
8843 1.38629 1.38629 1.38629 1.38629
|
|
8844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8845 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
8846 1.38629 1.38629 1.38629 1.38629
|
|
8847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8848 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
8849 1.38629 1.38629 1.38629 1.38629
|
|
8850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8851 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
8852 1.38629 1.38629 1.38629 1.38629
|
|
8853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8854 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
|
|
8855 1.38629 1.38629 1.38629 1.38629
|
|
8856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8857 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
|
|
8858 1.38629 1.38629 1.38629 1.38629
|
|
8859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8860 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
8861 1.38629 1.38629 1.38629 1.38629
|
|
8862 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8863 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
8864 1.38629 1.38629 1.38629 1.38629
|
|
8865 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8866 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
8867 1.38629 1.38629 1.38629 1.38629
|
|
8868 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8869 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
8870 1.38629 1.38629 1.38629 1.38629
|
|
8871 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8872 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
8873 1.38629 1.38629 1.38629 1.38629
|
|
8874 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8875 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
|
|
8876 1.38629 1.38629 1.38629 1.38629
|
|
8877 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8878 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
|
|
8879 1.38629 1.38629 1.38629 1.38629
|
|
8880 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8881 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
|
|
8882 1.38629 1.38629 1.38629 1.38629
|
|
8883 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8884 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
8885 1.38629 1.38629 1.38629 1.38629
|
|
8886 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8887 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
|
|
8888 1.38629 1.38629 1.38629 1.38629
|
|
8889 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8890 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
8891 1.38629 1.38629 1.38629 1.38629
|
|
8892 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8893 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
|
|
8894 1.38629 1.38629 1.38629 1.38629
|
|
8895 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8896 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
8897 1.38629 1.38629 1.38629 1.38629
|
|
8898 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8899 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
|
|
8900 1.38629 1.38629 1.38629 1.38629
|
|
8901 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8902 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
|
|
8903 1.38629 1.38629 1.38629 1.38629
|
|
8904 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8905 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
|
|
8906 1.38629 1.38629 1.38629 1.38629
|
|
8907 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8908 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
|
|
8909 1.38629 1.38629 1.38629 1.38629
|
|
8910 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8911 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
|
|
8912 1.38629 1.38629 1.38629 1.38629
|
|
8913 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8914 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
8915 1.38629 1.38629 1.38629 1.38629
|
|
8916 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8917 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
|
|
8918 1.38629 1.38629 1.38629 1.38629
|
|
8919 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8920 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
8921 1.38629 1.38629 1.38629 1.38629
|
|
8922 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8923 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
|
|
8924 1.38629 1.38629 1.38629 1.38629
|
|
8925 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8926 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
8927 1.38629 1.38629 1.38629 1.38629
|
|
8928 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8929 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
8930 1.38629 1.38629 1.38629 1.38629
|
|
8931 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8932 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
|
|
8933 1.38629 1.38629 1.38629 1.38629
|
|
8934 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8935 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
8936 1.38629 1.38629 1.38629 1.38629
|
|
8937 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8938 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
8939 1.38629 1.38629 1.38629 1.38629
|
|
8940 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8941 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
|
|
8942 1.38629 1.38629 1.38629 1.38629
|
|
8943 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8944 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
8945 1.38629 1.38629 1.38629 1.38629
|
|
8946 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8947 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
8948 1.38629 1.38629 1.38629 1.38629
|
|
8949 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8950 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
|
|
8951 1.38629 1.38629 1.38629 1.38629
|
|
8952 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8953 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
8954 1.38629 1.38629 1.38629 1.38629
|
|
8955 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8956 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
8957 1.38629 1.38629 1.38629 1.38629
|
|
8958 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8959 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
|
|
8960 1.38629 1.38629 1.38629 1.38629
|
|
8961 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8962 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
|
|
8963 1.38629 1.38629 1.38629 1.38629
|
|
8964 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8965 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
8966 1.38629 1.38629 1.38629 1.38629
|
|
8967 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8968 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
8969 1.38629 1.38629 1.38629 1.38629
|
|
8970 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8971 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
|
|
8972 1.38629 1.38629 1.38629 1.38629
|
|
8973 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8974 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
|
|
8975 1.38629 1.38629 1.38629 1.38629
|
|
8976 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8977 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
|
|
8978 1.38629 1.38629 1.38629 1.38629
|
|
8979 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8980 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
|
|
8981 1.38629 1.38629 1.38629 1.38629
|
|
8982 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8983 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
|
|
8984 1.38629 1.38629 1.38629 1.38629
|
|
8985 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8986 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
|
|
8987 1.38629 1.38629 1.38629 1.38629
|
|
8988 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8989 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
|
|
8990 1.38629 1.38629 1.38629 1.38629
|
|
8991 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8992 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
8993 1.38629 1.38629 1.38629 1.38629
|
|
8994 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8995 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
8996 1.38629 1.38629 1.38629 1.38629
|
|
8997 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
8998 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
8999 1.38629 1.38629 1.38629 1.38629
|
|
9000 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9001 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
9002 1.38629 1.38629 1.38629 1.38629
|
|
9003 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9004 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
|
|
9005 1.38629 1.38629 1.38629 1.38629
|
|
9006 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9007 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
9008 1.38629 1.38629 1.38629 1.38629
|
|
9009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9010 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
|
|
9011 1.38629 1.38629 1.38629 1.38629
|
|
9012 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9013 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
9014 1.38629 1.38629 1.38629 1.38629
|
|
9015 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9016 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
9017 1.38629 1.38629 1.38629 1.38629
|
|
9018 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9019 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
|
|
9020 1.38629 1.38629 1.38629 1.38629
|
|
9021 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9022 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
|
|
9023 1.38629 1.38629 1.38629 1.38629
|
|
9024 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9025 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
|
|
9026 1.38629 1.38629 1.38629 1.38629
|
|
9027 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
9028 //
|
|
9029 HMMER3/f [3.2.1 | June 2018]
|
|
9030 NAME long.38.aln
|
|
9031 LENG 74
|
|
9032 MAXL 165
|
|
9033 ALPH DNA
|
|
9034 RF no
|
|
9035 MM no
|
|
9036 CONS yes
|
|
9037 CS no
|
|
9038 MAP yes
|
|
9039 DATE Tue May 28 13:12:04 2019
|
|
9040 NSEQ 2
|
|
9041 EFFN 2.000000
|
|
9042 CKSUM 1827060747
|
|
9043 STATS LOCAL MSV -8.2083 0.72255
|
|
9044 STATS LOCAL VITERBI -9.4166 0.72255
|
|
9045 STATS LOCAL FORWARD -3.6220 0.72255
|
|
9046 HMM A C G T
|
|
9047 m->m m->i m->d i->m i->i d->m d->d
|
|
9048 COMPO 1.72925 1.45913 1.16890 1.27499
|
|
9049 1.38629 1.38629 1.38629 1.38629
|
|
9050 0.33647 3.73767 1.33977 1.46634 0.26236 0.00000 *
|
|
9051 1 1.91091 1.78233 1.95844 0.61114 1 t - - -
|
|
9052 1.38629 1.38629 1.38629 1.38629
|
|
9053 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9054 2 1.91091 1.78233 1.95844 0.61114 2 t - - -
|
|
9055 1.38629 1.38629 1.38629 1.38629
|
|
9056 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9057 3 1.98342 0.60779 2.04641 1.66785 3 c - - -
|
|
9058 1.38629 1.38629 1.38629 1.38629
|
|
9059 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9060 4 1.91091 1.78233 1.95844 0.61114 4 t - - -
|
|
9061 1.38629 1.38629 1.38629 1.38629
|
|
9062 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
|
|
9063 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
|
|
9064 1.38629 1.38629 1.38629 1.38629
|
|
9065 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9066 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
|
|
9067 1.38629 1.38629 1.38629 1.38629
|
|
9068 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9069 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
|
|
9070 1.38629 1.38629 1.38629 1.38629
|
|
9071 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9072 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
|
|
9073 1.38629 1.38629 1.38629 1.38629
|
|
9074 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9075 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
|
|
9076 1.38629 1.38629 1.38629 1.38629
|
|
9077 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9078 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
|
|
9079 1.38629 1.38629 1.38629 1.38629
|
|
9080 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9081 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
|
|
9082 1.38629 1.38629 1.38629 1.38629
|
|
9083 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9084 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
9085 1.38629 1.38629 1.38629 1.38629
|
|
9086 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9087 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
|
|
9088 1.38629 1.38629 1.38629 1.38629
|
|
9089 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9090 14 1.09289 1.89038 1.88803 1.01509 14 t - - -
|
|
9091 1.38629 1.38629 1.38629 1.38629
|
|
9092 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9093 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
|
|
9094 1.38629 1.38629 1.38629 1.38629
|
|
9095 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9096 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
|
|
9097 1.38629 1.38629 1.38629 1.38629
|
|
9098 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9099 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
9100 1.38629 1.38629 1.38629 1.38629
|
|
9101 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9102 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
9103 1.38629 1.38629 1.38629 1.38629
|
|
9104 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9105 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
|
|
9106 1.38629 1.38629 1.38629 1.38629
|
|
9107 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9108 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
9109 1.38629 1.38629 1.38629 1.38629
|
|
9110 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9111 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
|
|
9112 1.38629 1.38629 1.38629 1.38629
|
|
9113 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9114 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
|
|
9115 1.38629 1.38629 1.38629 1.38629
|
|
9116 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9117 23 1.88401 1.14290 1.03416 1.75097 23 g - - -
|
|
9118 1.38629 1.38629 1.38629 1.38629
|
|
9119 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9120 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
|
|
9121 1.38629 1.38629 1.38629 1.38629
|
|
9122 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9123 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
|
|
9124 1.38629 1.38629 1.38629 1.38629
|
|
9125 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9126 26 1.88401 1.14290 1.03416 1.75097 26 g - - -
|
|
9127 1.38629 1.38629 1.38629 1.38629
|
|
9128 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9129 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
|
|
9130 1.38629 1.38629 1.38629 1.38629
|
|
9131 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9132 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
|
|
9133 1.38629 1.38629 1.38629 1.38629
|
|
9134 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9135 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
9136 1.38629 1.38629 1.38629 1.38629
|
|
9137 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9138 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
|
|
9139 1.38629 1.38629 1.38629 1.38629
|
|
9140 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9141 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
|
|
9142 1.38629 1.38629 1.38629 1.38629
|
|
9143 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9144 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
9145 1.38629 1.38629 1.38629 1.38629
|
|
9146 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9147 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
|
|
9148 1.38629 1.38629 1.38629 1.38629
|
|
9149 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9150 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
|
|
9151 1.38629 1.38629 1.38629 1.38629
|
|
9152 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9153 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
9154 1.38629 1.38629 1.38629 1.38629
|
|
9155 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9156 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
|
|
9157 1.38629 1.38629 1.38629 1.38629
|
|
9158 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9159 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
|
|
9160 1.38629 1.38629 1.38629 1.38629
|
|
9161 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9162 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
|
|
9163 1.38629 1.38629 1.38629 1.38629
|
|
9164 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9165 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
|
|
9166 1.38629 1.38629 1.38629 1.38629
|
|
9167 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9168 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
|
|
9169 1.38629 1.38629 1.38629 1.38629
|
|
9170 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9171 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
9172 1.38629 1.38629 1.38629 1.38629
|
|
9173 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9174 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
|
|
9175 1.38629 1.38629 1.38629 1.38629
|
|
9176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9177 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
9178 1.38629 1.38629 1.38629 1.38629
|
|
9179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9180 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
|
|
9181 1.38629 1.38629 1.38629 1.38629
|
|
9182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9183 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
|
|
9184 1.38629 1.38629 1.38629 1.38629
|
|
9185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9186 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
9187 1.38629 1.38629 1.38629 1.38629
|
|
9188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9189 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
|
|
9190 1.38629 1.38629 1.38629 1.38629
|
|
9191 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9192 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
|
|
9193 1.38629 1.38629 1.38629 1.38629
|
|
9194 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9195 49 1.84050 1.95342 1.03654 1.06480 49 g - - -
|
|
9196 1.38629 1.38629 1.38629 1.38629
|
|
9197 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9198 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
|
|
9199 1.38629 1.38629 1.38629 1.38629
|
|
9200 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9201 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
9202 1.38629 1.38629 1.38629 1.38629
|
|
9203 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9204 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
|
|
9205 1.38629 1.38629 1.38629 1.38629
|
|
9206 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9207 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
|
|
9208 1.38629 1.38629 1.38629 1.38629
|
|
9209 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9210 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
|
|
9211 1.38629 1.38629 1.38629 1.38629
|
|
9212 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9213 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
|
|
9214 1.38629 1.38629 1.38629 1.38629
|
|
9215 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9216 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
|
|
9217 1.38629 1.38629 1.38629 1.38629
|
|
9218 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9219 57 1.09289 1.89038 1.88803 1.01509 57 t - - -
|
|
9220 1.38629 1.38629 1.38629 1.38629
|
|
9221 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9222 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
|
|
9223 1.38629 1.38629 1.38629 1.38629
|
|
9224 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9225 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
|
|
9226 1.38629 1.38629 1.38629 1.38629
|
|
9227 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9228 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
|
|
9229 1.38629 1.38629 1.38629 1.38629
|
|
9230 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9231 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
|
|
9232 1.38629 1.38629 1.38629 1.38629
|
|
9233 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9234 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
|
|
9235 1.38629 1.38629 1.38629 1.38629
|
|
9236 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9237 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
|
|
9238 1.38629 1.38629 1.38629 1.38629
|
|
9239 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9240 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
9241 1.38629 1.38629 1.38629 1.38629
|
|
9242 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9243 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
|
|
9244 1.38629 1.38629 1.38629 1.38629
|
|
9245 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9246 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
9247 1.38629 1.38629 1.38629 1.38629
|
|
9248 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9249 67 2.38910 2.82844 0.25233 2.62837 67 g - - -
|
|
9250 1.38629 1.38629 1.38629 1.38629
|
|
9251 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9252 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
|
|
9253 1.38629 1.38629 1.38629 1.38629
|
|
9254 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9255 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
|
|
9256 1.38629 1.38629 1.38629 1.38629
|
|
9257 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9258 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
|
|
9259 1.38629 1.38629 1.38629 1.38629
|
|
9260 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
|
|
9261 71 1.91091 1.78233 1.95844 0.61114 71 t - - -
|
|
9262 1.38629 1.38629 1.38629 1.38629
|
|
9263 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9264 72 1.97267 2.25870 0.46443 2.05625 72 g - - -
|
|
9265 1.38629 1.38629 1.38629 1.38629
|
|
9266 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9267 73 1.98342 0.60779 2.04641 1.66785 73 c - - -
|
|
9268 1.38629 1.38629 1.38629 1.38629
|
|
9269 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9270 74 1.91091 1.78233 1.95844 0.61114 74 t - - -
|
|
9271 1.38629 1.38629 1.38629 1.38629
|
|
9272 0.03279 3.43399 * 1.46634 0.26236 0.00000 *
|
|
9273 //
|
|
9274 HMMER3/f [3.2.1 | June 2018]
|
|
9275 NAME long.39.aln
|
|
9276 LENG 99
|
|
9277 MAXL 200
|
|
9278 ALPH DNA
|
|
9279 RF no
|
|
9280 MM no
|
|
9281 CONS yes
|
|
9282 CS no
|
|
9283 MAP yes
|
|
9284 DATE Tue May 28 13:12:03 2019
|
|
9285 NSEQ 2
|
|
9286 EFFN 2.000000
|
|
9287 CKSUM 3832268543
|
|
9288 STATS LOCAL MSV -9.7613 0.73289
|
|
9289 STATS LOCAL VITERBI -11.5188 0.73289
|
|
9290 STATS LOCAL FORWARD -2.6614 0.73289
|
|
9291 HMM A C G T
|
|
9292 m->m m->i m->d i->m i->i d->m d->d
|
|
9293 COMPO 1.28054 1.52683 1.53556 1.23942
|
|
9294 1.38629 1.38629 1.38629 1.38629
|
|
9295 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
9296 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
9297 1.38629 1.38629 1.38629 1.38629
|
|
9298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9299 2 1.12273 2.17004 0.88086 1.92408 2 g - - -
|
|
9300 1.38629 1.38629 1.38629 1.38629
|
|
9301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9302 3 2.01896 1.01168 2.12953 0.95527 3 t - - -
|
|
9303 1.38629 1.38629 1.38629 1.38629
|
|
9304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9305 4 1.09289 1.89038 1.88803 1.01509 4 t - - -
|
|
9306 1.38629 1.38629 1.38629 1.38629
|
|
9307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9308 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
9309 1.38629 1.38629 1.38629 1.38629
|
|
9310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9311 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
|
|
9312 1.38629 1.38629 1.38629 1.38629
|
|
9313 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
|
|
9314 7 1.97267 2.25870 0.46443 2.05625 7 g - - -
|
|
9315 1.38629 1.38629 1.38629 1.38629
|
|
9316 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9317 8 0.56139 2.08489 1.86185 1.89791 8 a - - -
|
|
9318 1.38629 1.38629 1.38629 1.38629
|
|
9319 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9320 9 1.98342 0.60779 2.04641 1.66785 9 c - - -
|
|
9321 1.38629 1.38629 1.38629 1.38629
|
|
9322 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9323 10 1.97267 2.25870 0.46443 2.05625 10 g - - -
|
|
9324 1.38629 1.38629 1.38629 1.38629
|
|
9325 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9326 11 1.98342 0.60779 2.04641 1.66785 11 c - - -
|
|
9327 1.38629 1.38629 1.38629 1.38629
|
|
9328 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9329 12 0.56139 2.08489 1.86185 1.89791 12 a - - -
|
|
9330 1.38629 1.38629 1.38629 1.38629
|
|
9331 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9332 13 1.97267 2.25870 0.46443 2.05625 13 g - - -
|
|
9333 1.38629 1.38629 1.38629 1.38629
|
|
9334 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9335 14 0.56139 2.08489 1.86185 1.89791 14 a - - -
|
|
9336 1.38629 1.38629 1.38629 1.38629
|
|
9337 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9338 15 0.56139 2.08489 1.86185 1.89791 15 a - - -
|
|
9339 1.38629 1.38629 1.38629 1.38629
|
|
9340 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9341 16 1.97267 2.25870 0.46443 2.05625 16 g - - -
|
|
9342 1.38629 1.38629 1.38629 1.38629
|
|
9343 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9344 17 1.91091 1.78233 1.95844 0.61114 17 t - - -
|
|
9345 1.38629 1.38629 1.38629 1.38629
|
|
9346 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9347 18 1.91091 1.78233 1.95844 0.61114 18 t - - -
|
|
9348 1.38629 1.38629 1.38629 1.38629
|
|
9349 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9350 19 0.56139 2.08489 1.86185 1.89791 19 a - - -
|
|
9351 1.38629 1.38629 1.38629 1.38629
|
|
9352 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9353 20 1.91091 1.78233 1.95844 0.61114 20 t - - -
|
|
9354 1.38629 1.38629 1.38629 1.38629
|
|
9355 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9356 21 1.91091 1.78233 1.95844 0.61114 21 t - - -
|
|
9357 1.38629 1.38629 1.38629 1.38629
|
|
9358 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9359 22 1.98342 0.60779 2.04641 1.66785 22 c - - -
|
|
9360 1.38629 1.38629 1.38629 1.38629
|
|
9361 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9362 23 1.98342 0.60779 2.04641 1.66785 23 c - - -
|
|
9363 1.38629 1.38629 1.38629 1.38629
|
|
9364 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9365 24 0.56139 2.08489 1.86185 1.89791 24 a - - -
|
|
9366 1.38629 1.38629 1.38629 1.38629
|
|
9367 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9368 25 1.97267 2.25870 0.46443 2.05625 25 g - - -
|
|
9369 1.38629 1.38629 1.38629 1.38629
|
|
9370 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9371 26 1.98342 0.60779 2.04641 1.66785 26 c - - -
|
|
9372 1.38629 1.38629 1.38629 1.38629
|
|
9373 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9374 27 0.56139 2.08489 1.86185 1.89791 27 a - - -
|
|
9375 1.38629 1.38629 1.38629 1.38629
|
|
9376 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9377 28 1.91091 1.78233 1.95844 0.61114 28 t - - -
|
|
9378 1.38629 1.38629 1.38629 1.38629
|
|
9379 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9380 29 0.56139 2.08489 1.86185 1.89791 29 a - - -
|
|
9381 1.38629 1.38629 1.38629 1.38629
|
|
9382 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9383 30 1.98342 0.60779 2.04641 1.66785 30 c - - -
|
|
9384 1.38629 1.38629 1.38629 1.38629
|
|
9385 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9386 31 0.56139 2.08489 1.86185 1.89791 31 a - - -
|
|
9387 1.38629 1.38629 1.38629 1.38629
|
|
9388 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9389 32 1.98342 0.60779 2.04641 1.66785 32 c - - -
|
|
9390 1.38629 1.38629 1.38629 1.38629
|
|
9391 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9392 33 0.56139 2.08489 1.86185 1.89791 33 a - - -
|
|
9393 1.38629 1.38629 1.38629 1.38629
|
|
9394 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9395 34 1.97267 2.25870 0.46443 2.05625 34 g - - -
|
|
9396 1.38629 1.38629 1.38629 1.38629
|
|
9397 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9398 35 1.97267 2.25870 0.46443 2.05625 35 g - - -
|
|
9399 1.38629 1.38629 1.38629 1.38629
|
|
9400 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
|
|
9401 36 1.84050 1.95342 1.03654 1.06480 36 g - - -
|
|
9402 1.38629 1.38629 1.38629 1.38629
|
|
9403 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9404 37 2.01896 1.01168 2.12953 0.95527 37 t - - -
|
|
9405 1.38629 1.38629 1.38629 1.38629
|
|
9406 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9407 38 1.09289 1.89038 1.88803 1.01509 38 t - - -
|
|
9408 1.38629 1.38629 1.38629 1.38629
|
|
9409 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9410 39 1.84050 1.95342 1.03654 1.06480 39 g - - -
|
|
9411 1.38629 1.38629 1.38629 1.38629
|
|
9412 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9413 40 1.12273 2.17004 0.88086 1.92408 40 g - - -
|
|
9414 1.38629 1.38629 1.38629 1.38629
|
|
9415 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9416 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
|
|
9417 1.38629 1.38629 1.38629 1.38629
|
|
9418 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9419 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
9420 1.38629 1.38629 1.38629 1.38629
|
|
9421 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9422 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
9423 1.38629 1.38629 1.38629 1.38629
|
|
9424 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9425 44 1.88401 1.14290 1.03416 1.75097 44 g - - -
|
|
9426 1.38629 1.38629 1.38629 1.38629
|
|
9427 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9428 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
9429 1.38629 1.38629 1.38629 1.38629
|
|
9430 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9431 46 1.88401 1.14290 1.03416 1.75097 46 g - - -
|
|
9432 1.38629 1.38629 1.38629 1.38629
|
|
9433 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9434 47 1.08498 1.08670 1.94700 1.70340 47 a - - -
|
|
9435 1.38629 1.38629 1.38629 1.38629
|
|
9436 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9437 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
|
|
9438 1.38629 1.38629 1.38629 1.38629
|
|
9439 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9440 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
|
|
9441 1.38629 1.38629 1.38629 1.38629
|
|
9442 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9443 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
|
|
9444 1.38629 1.38629 1.38629 1.38629
|
|
9445 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9446 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
9447 1.38629 1.38629 1.38629 1.38629
|
|
9448 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9449 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
|
|
9450 1.38629 1.38629 1.38629 1.38629
|
|
9451 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9452 53 2.01896 1.01168 2.12953 0.95527 53 t - - -
|
|
9453 1.38629 1.38629 1.38629 1.38629
|
|
9454 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9455 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
|
|
9456 1.38629 1.38629 1.38629 1.38629
|
|
9457 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9458 55 1.88401 1.14290 1.03416 1.75097 55 g - - -
|
|
9459 1.38629 1.38629 1.38629 1.38629
|
|
9460 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9461 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
9462 1.38629 1.38629 1.38629 1.38629
|
|
9463 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9464 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
|
|
9465 1.38629 1.38629 1.38629 1.38629
|
|
9466 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9467 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
|
|
9468 1.38629 1.38629 1.38629 1.38629
|
|
9469 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9470 59 2.01896 1.01168 2.12953 0.95527 59 t - - -
|
|
9471 1.38629 1.38629 1.38629 1.38629
|
|
9472 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9473 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
|
|
9474 1.38629 1.38629 1.38629 1.38629
|
|
9475 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9476 61 1.09289 1.89038 1.88803 1.01509 61 t - - -
|
|
9477 1.38629 1.38629 1.38629 1.38629
|
|
9478 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9479 62 1.12273 2.17004 0.88086 1.92408 62 g - - -
|
|
9480 1.38629 1.38629 1.38629 1.38629
|
|
9481 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9482 63 1.08498 1.08670 1.94700 1.70340 63 a - - -
|
|
9483 1.38629 1.38629 1.38629 1.38629
|
|
9484 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9485 64 2.01896 1.01168 2.12953 0.95527 64 t - - -
|
|
9486 1.38629 1.38629 1.38629 1.38629
|
|
9487 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9488 65 2.01896 1.01168 2.12953 0.95527 65 t - - -
|
|
9489 1.38629 1.38629 1.38629 1.38629
|
|
9490 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9491 66 1.09289 1.89038 1.88803 1.01509 66 t - - -
|
|
9492 1.38629 1.38629 1.38629 1.38629
|
|
9493 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9494 67 2.38910 2.82844 0.25233 2.62837 67 g - - -
|
|
9495 1.38629 1.38629 1.38629 1.38629
|
|
9496 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
|
|
9497 68 1.91091 1.78233 1.95844 0.61114 68 t - - -
|
|
9498 1.38629 1.38629 1.38629 1.38629
|
|
9499 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9500 69 1.91091 1.78233 1.95844 0.61114 69 t - - -
|
|
9501 1.38629 1.38629 1.38629 1.38629
|
|
9502 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9503 70 1.91091 1.78233 1.95844 0.61114 70 t - - -
|
|
9504 1.38629 1.38629 1.38629 1.38629
|
|
9505 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9506 71 1.98342 0.60779 2.04641 1.66785 71 c - - -
|
|
9507 1.38629 1.38629 1.38629 1.38629
|
|
9508 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9509 72 1.91091 1.78233 1.95844 0.61114 72 t - - -
|
|
9510 1.38629 1.38629 1.38629 1.38629
|
|
9511 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9512 73 1.97267 2.25870 0.46443 2.05625 73 g - - -
|
|
9513 1.38629 1.38629 1.38629 1.38629
|
|
9514 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9515 74 1.98342 0.60779 2.04641 1.66785 74 c - - -
|
|
9516 1.38629 1.38629 1.38629 1.38629
|
|
9517 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9518 75 1.91091 1.78233 1.95844 0.61114 75 t - - -
|
|
9519 1.38629 1.38629 1.38629 1.38629
|
|
9520 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9521 76 1.97267 2.25870 0.46443 2.05625 76 g - - -
|
|
9522 1.38629 1.38629 1.38629 1.38629
|
|
9523 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9524 77 1.97267 2.25870 0.46443 2.05625 77 g - - -
|
|
9525 1.38629 1.38629 1.38629 1.38629
|
|
9526 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9527 78 0.56139 2.08489 1.86185 1.89791 78 a - - -
|
|
9528 1.38629 1.38629 1.38629 1.38629
|
|
9529 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9530 79 0.56139 2.08489 1.86185 1.89791 79 a - - -
|
|
9531 1.38629 1.38629 1.38629 1.38629
|
|
9532 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9533 80 1.91091 1.78233 1.95844 0.61114 80 t - - -
|
|
9534 1.38629 1.38629 1.38629 1.38629
|
|
9535 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9536 81 0.56139 2.08489 1.86185 1.89791 81 a - - -
|
|
9537 1.38629 1.38629 1.38629 1.38629
|
|
9538 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9539 82 0.56139 2.08489 1.86185 1.89791 82 a - - -
|
|
9540 1.38629 1.38629 1.38629 1.38629
|
|
9541 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9542 83 1.98342 0.60779 2.04641 1.66785 83 c - - -
|
|
9543 1.38629 1.38629 1.38629 1.38629
|
|
9544 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9545 84 1.91091 1.78233 1.95844 0.61114 84 t - - -
|
|
9546 1.38629 1.38629 1.38629 1.38629
|
|
9547 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9548 85 1.91091 1.78233 1.95844 0.61114 85 t - - -
|
|
9549 1.38629 1.38629 1.38629 1.38629
|
|
9550 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9551 86 1.98342 0.60779 2.04641 1.66785 86 c - - -
|
|
9552 1.38629 1.38629 1.38629 1.38629
|
|
9553 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9554 87 1.91091 1.78233 1.95844 0.61114 87 t - - -
|
|
9555 1.38629 1.38629 1.38629 1.38629
|
|
9556 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9557 88 1.97267 2.25870 0.46443 2.05625 88 g - - -
|
|
9558 1.38629 1.38629 1.38629 1.38629
|
|
9559 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9560 89 1.98342 0.60779 2.04641 1.66785 89 c - - -
|
|
9561 1.38629 1.38629 1.38629 1.38629
|
|
9562 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9563 90 1.91091 1.78233 1.95844 0.61114 90 t - - -
|
|
9564 1.38629 1.38629 1.38629 1.38629
|
|
9565 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9566 91 1.91091 1.78233 1.95844 0.61114 91 t - - -
|
|
9567 1.38629 1.38629 1.38629 1.38629
|
|
9568 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9569 92 1.98342 0.60779 2.04641 1.66785 92 c - - -
|
|
9570 1.38629 1.38629 1.38629 1.38629
|
|
9571 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9572 93 1.91091 1.78233 1.95844 0.61114 93 t - - -
|
|
9573 1.38629 1.38629 1.38629 1.38629
|
|
9574 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9575 94 0.56139 2.08489 1.86185 1.89791 94 a - - -
|
|
9576 1.38629 1.38629 1.38629 1.38629
|
|
9577 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9578 95 1.91091 1.78233 1.95844 0.61114 95 t - - -
|
|
9579 1.38629 1.38629 1.38629 1.38629
|
|
9580 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9581 96 0.56139 2.08489 1.86185 1.89791 96 a - - -
|
|
9582 1.38629 1.38629 1.38629 1.38629
|
|
9583 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
|
|
9584 97 2.01896 1.01168 2.12953 0.95527 97 t - - -
|
|
9585 1.38629 1.38629 1.38629 1.38629
|
|
9586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9587 98 0.28818 2.60848 2.42319 2.42940 98 a - - -
|
|
9588 1.38629 1.38629 1.38629 1.38629
|
|
9589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9590 99 1.84050 1.95342 1.03654 1.06480 99 g - - -
|
|
9591 1.38629 1.38629 1.38629 1.38629
|
|
9592 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
9593 //
|
|
9594 HMMER3/f [3.2.1 | June 2018]
|
|
9595 NAME long.40.aln
|
|
9596 LENG 85
|
|
9597 MAXL 180
|
|
9598 ALPH DNA
|
|
9599 RF no
|
|
9600 MM no
|
|
9601 CONS yes
|
|
9602 CS no
|
|
9603 MAP yes
|
|
9604 DATE Tue May 28 13:12:03 2019
|
|
9605 NSEQ 2
|
|
9606 EFFN 2.000000
|
|
9607 CKSUM 850921081
|
|
9608 STATS LOCAL MSV -9.2442 0.73770
|
|
9609 STATS LOCAL VITERBI -10.9061 0.73770
|
|
9610 STATS LOCAL FORWARD -3.0276 0.73770
|
|
9611 HMM A C G T
|
|
9612 m->m m->i m->d i->m i->i d->m d->d
|
|
9613 COMPO 1.34684 1.48715 1.41637 1.30441
|
|
9614 1.38629 1.38629 1.38629 1.38629
|
|
9615 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
9616 1 1.09289 1.89038 1.88803 1.01509 1 t - - -
|
|
9617 1.38629 1.38629 1.38629 1.38629
|
|
9618 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9619 2 1.84050 1.95342 1.03654 1.06480 2 g - - -
|
|
9620 1.38629 1.38629 1.38629 1.38629
|
|
9621 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9622 3 1.84050 1.95342 1.03654 1.06480 3 g - - -
|
|
9623 1.38629 1.38629 1.38629 1.38629
|
|
9624 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9625 4 1.09289 1.89038 1.88803 1.01509 4 t - - -
|
|
9626 1.38629 1.38629 1.38629 1.38629
|
|
9627 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9628 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
9629 1.38629 1.38629 1.38629 1.38629
|
|
9630 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9631 6 2.01896 1.01168 2.12953 0.95527 6 t - - -
|
|
9632 1.38629 1.38629 1.38629 1.38629
|
|
9633 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9634 7 1.12273 2.17004 0.88086 1.92408 7 g - - -
|
|
9635 1.38629 1.38629 1.38629 1.38629
|
|
9636 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
|
|
9637 8 1.98342 0.60779 2.04641 1.66785 8 c - - -
|
|
9638 1.38629 1.38629 1.38629 1.38629
|
|
9639 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9640 9 1.98342 0.60779 2.04641 1.66785 9 c - - -
|
|
9641 1.38629 1.38629 1.38629 1.38629
|
|
9642 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9643 10 1.91091 1.78233 1.95844 0.61114 10 t - - -
|
|
9644 1.38629 1.38629 1.38629 1.38629
|
|
9645 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9646 11 1.98342 0.60779 2.04641 1.66785 11 c - - -
|
|
9647 1.38629 1.38629 1.38629 1.38629
|
|
9648 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9649 12 0.56139 2.08489 1.86185 1.89791 12 a - - -
|
|
9650 1.38629 1.38629 1.38629 1.38629
|
|
9651 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9652 13 1.97267 2.25870 0.46443 2.05625 13 g - - -
|
|
9653 1.38629 1.38629 1.38629 1.38629
|
|
9654 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9655 14 1.91091 1.78233 1.95844 0.61114 14 t - - -
|
|
9656 1.38629 1.38629 1.38629 1.38629
|
|
9657 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9658 15 1.98342 0.60779 2.04641 1.66785 15 c - - -
|
|
9659 1.38629 1.38629 1.38629 1.38629
|
|
9660 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9661 16 0.56139 2.08489 1.86185 1.89791 16 a - - -
|
|
9662 1.38629 1.38629 1.38629 1.38629
|
|
9663 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9664 17 1.91091 1.78233 1.95844 0.61114 17 t - - -
|
|
9665 1.38629 1.38629 1.38629 1.38629
|
|
9666 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9667 18 1.91091 1.78233 1.95844 0.61114 18 t - - -
|
|
9668 1.38629 1.38629 1.38629 1.38629
|
|
9669 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9670 19 0.56139 2.08489 1.86185 1.89791 19 a - - -
|
|
9671 1.38629 1.38629 1.38629 1.38629
|
|
9672 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9673 20 1.98342 0.60779 2.04641 1.66785 20 c - - -
|
|
9674 1.38629 1.38629 1.38629 1.38629
|
|
9675 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9676 21 0.56139 2.08489 1.86185 1.89791 21 a - - -
|
|
9677 1.38629 1.38629 1.38629 1.38629
|
|
9678 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9679 22 1.98342 0.60779 2.04641 1.66785 22 c - - -
|
|
9680 1.38629 1.38629 1.38629 1.38629
|
|
9681 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
|
|
9682 23 1.12273 2.17004 0.88086 1.92408 23 g - - -
|
|
9683 1.38629 1.38629 1.38629 1.38629
|
|
9684 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9685 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
|
|
9686 1.38629 1.38629 1.38629 1.38629
|
|
9687 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9688 25 1.12273 2.17004 0.88086 1.92408 25 g - - -
|
|
9689 1.38629 1.38629 1.38629 1.38629
|
|
9690 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9691 26 1.08498 1.08670 1.94700 1.70340 26 a - - -
|
|
9692 1.38629 1.38629 1.38629 1.38629
|
|
9693 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9694 27 2.01896 1.01168 2.12953 0.95527 27 t - - -
|
|
9695 1.38629 1.38629 1.38629 1.38629
|
|
9696 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9697 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
9698 1.38629 1.38629 1.38629 1.38629
|
|
9699 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9700 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
|
|
9701 1.38629 1.38629 1.38629 1.38629
|
|
9702 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9703 30 1.84050 1.95342 1.03654 1.06480 30 g - - -
|
|
9704 1.38629 1.38629 1.38629 1.38629
|
|
9705 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9706 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
|
|
9707 1.38629 1.38629 1.38629 1.38629
|
|
9708 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9709 32 2.01896 1.01168 2.12953 0.95527 32 t - - -
|
|
9710 1.38629 1.38629 1.38629 1.38629
|
|
9711 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9712 33 1.12273 2.17004 0.88086 1.92408 33 g - - -
|
|
9713 1.38629 1.38629 1.38629 1.38629
|
|
9714 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9715 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
9716 1.38629 1.38629 1.38629 1.38629
|
|
9717 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9718 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
|
|
9719 1.38629 1.38629 1.38629 1.38629
|
|
9720 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9721 36 1.12273 2.17004 0.88086 1.92408 36 g - - -
|
|
9722 1.38629 1.38629 1.38629 1.38629
|
|
9723 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9724 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
|
|
9725 1.38629 1.38629 1.38629 1.38629
|
|
9726 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9727 38 1.84050 1.95342 1.03654 1.06480 38 g - - -
|
|
9728 1.38629 1.38629 1.38629 1.38629
|
|
9729 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9730 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
|
|
9731 1.38629 1.38629 1.38629 1.38629
|
|
9732 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9733 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
9734 1.38629 1.38629 1.38629 1.38629
|
|
9735 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9736 41 1.08498 1.08670 1.94700 1.70340 41 a - - -
|
|
9737 1.38629 1.38629 1.38629 1.38629
|
|
9738 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9739 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
|
|
9740 1.38629 1.38629 1.38629 1.38629
|
|
9741 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9742 43 2.01896 1.01168 2.12953 0.95527 43 t - - -
|
|
9743 1.38629 1.38629 1.38629 1.38629
|
|
9744 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9745 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
9746 1.38629 1.38629 1.38629 1.38629
|
|
9747 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9748 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
|
|
9749 1.38629 1.38629 1.38629 1.38629
|
|
9750 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9751 46 1.84050 1.95342 1.03654 1.06480 46 g - - -
|
|
9752 1.38629 1.38629 1.38629 1.38629
|
|
9753 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9754 47 1.12273 2.17004 0.88086 1.92408 47 g - - -
|
|
9755 1.38629 1.38629 1.38629 1.38629
|
|
9756 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9757 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
|
|
9758 1.38629 1.38629 1.38629 1.38629
|
|
9759 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9760 49 1.08498 1.08670 1.94700 1.70340 49 a - - -
|
|
9761 1.38629 1.38629 1.38629 1.38629
|
|
9762 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9763 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
|
|
9764 1.38629 1.38629 1.38629 1.38629
|
|
9765 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9766 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
9767 1.38629 1.38629 1.38629 1.38629
|
|
9768 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9769 52 1.12273 2.17004 0.88086 1.92408 52 g - - -
|
|
9770 1.38629 1.38629 1.38629 1.38629
|
|
9771 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9772 53 1.84050 1.95342 1.03654 1.06480 53 g - - -
|
|
9773 1.38629 1.38629 1.38629 1.38629
|
|
9774 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9775 54 2.01896 1.01168 2.12953 0.95527 54 t - - -
|
|
9776 1.38629 1.38629 1.38629 1.38629
|
|
9777 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9778 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
|
|
9779 1.38629 1.38629 1.38629 1.38629
|
|
9780 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9781 56 2.01896 1.01168 2.12953 0.95527 56 t - - -
|
|
9782 1.38629 1.38629 1.38629 1.38629
|
|
9783 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9784 57 1.88401 1.14290 1.03416 1.75097 57 g - - -
|
|
9785 1.38629 1.38629 1.38629 1.38629
|
|
9786 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9787 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
9788 1.38629 1.38629 1.38629 1.38629
|
|
9789 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9790 59 1.84050 1.95342 1.03654 1.06480 59 g - - -
|
|
9791 1.38629 1.38629 1.38629 1.38629
|
|
9792 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9793 60 1.09289 1.89038 1.88803 1.01509 60 t - - -
|
|
9794 1.38629 1.38629 1.38629 1.38629
|
|
9795 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9796 61 1.08498 1.08670 1.94700 1.70340 61 a - - -
|
|
9797 1.38629 1.38629 1.38629 1.38629
|
|
9798 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9799 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
9800 1.38629 1.38629 1.38629 1.38629
|
|
9801 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9802 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
|
|
9803 1.38629 1.38629 1.38629 1.38629
|
|
9804 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9805 64 1.84050 1.95342 1.03654 1.06480 64 g - - -
|
|
9806 1.38629 1.38629 1.38629 1.38629
|
|
9807 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9808 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
9809 1.38629 1.38629 1.38629 1.38629
|
|
9810 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9811 66 2.01896 1.01168 2.12953 0.95527 66 t - - -
|
|
9812 1.38629 1.38629 1.38629 1.38629
|
|
9813 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9814 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
9815 1.38629 1.38629 1.38629 1.38629
|
|
9816 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9817 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
|
|
9818 1.38629 1.38629 1.38629 1.38629
|
|
9819 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9820 69 1.09289 1.89038 1.88803 1.01509 69 t - - -
|
|
9821 1.38629 1.38629 1.38629 1.38629
|
|
9822 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9823 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
|
|
9824 1.38629 1.38629 1.38629 1.38629
|
|
9825 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
|
|
9826 71 1.97267 2.25870 0.46443 2.05625 71 g - - -
|
|
9827 1.38629 1.38629 1.38629 1.38629
|
|
9828 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9829 72 1.91091 1.78233 1.95844 0.61114 72 t - - -
|
|
9830 1.38629 1.38629 1.38629 1.38629
|
|
9831 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9832 73 1.97267 2.25870 0.46443 2.05625 73 g - - -
|
|
9833 1.38629 1.38629 1.38629 1.38629
|
|
9834 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9835 74 1.91091 1.78233 1.95844 0.61114 74 t - - -
|
|
9836 1.38629 1.38629 1.38629 1.38629
|
|
9837 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9838 75 1.91091 1.78233 1.95844 0.61114 75 t - - -
|
|
9839 1.38629 1.38629 1.38629 1.38629
|
|
9840 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9841 76 0.56139 2.08489 1.86185 1.89791 76 a - - -
|
|
9842 1.38629 1.38629 1.38629 1.38629
|
|
9843 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9844 77 1.98342 0.60779 2.04641 1.66785 77 c - - -
|
|
9845 1.38629 1.38629 1.38629 1.38629
|
|
9846 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9847 78 0.56139 2.08489 1.86185 1.89791 78 a - - -
|
|
9848 1.38629 1.38629 1.38629 1.38629
|
|
9849 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9850 79 0.56139 2.08489 1.86185 1.89791 79 a - - -
|
|
9851 1.38629 1.38629 1.38629 1.38629
|
|
9852 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9853 80 1.98342 0.60779 2.04641 1.66785 80 c - - -
|
|
9854 1.38629 1.38629 1.38629 1.38629
|
|
9855 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9856 81 1.91091 1.78233 1.95844 0.61114 81 t - - -
|
|
9857 1.38629 1.38629 1.38629 1.38629
|
|
9858 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9859 82 1.91091 1.78233 1.95844 0.61114 82 t - - -
|
|
9860 1.38629 1.38629 1.38629 1.38629
|
|
9861 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9862 83 1.97267 2.25870 0.46443 2.05625 83 g - - -
|
|
9863 1.38629 1.38629 1.38629 1.38629
|
|
9864 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9865 84 1.91091 1.78233 1.95844 0.61114 84 t - - -
|
|
9866 1.38629 1.38629 1.38629 1.38629
|
|
9867 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
9868 85 1.98342 0.60779 2.04641 1.66785 85 c - - -
|
|
9869 1.38629 1.38629 1.38629 1.38629
|
|
9870 0.03279 3.43399 * 1.46634 0.26236 0.00000 *
|
|
9871 //
|
|
9872 HMMER3/f [3.2.1 | June 2018]
|
|
9873 NAME long.41.aln
|
|
9874 LENG 70
|
|
9875 MAXL 160
|
|
9876 ALPH DNA
|
|
9877 RF no
|
|
9878 MM no
|
|
9879 CONS yes
|
|
9880 CS no
|
|
9881 MAP yes
|
|
9882 DATE Tue May 28 13:12:04 2019
|
|
9883 NSEQ 2
|
|
9884 EFFN 2.000000
|
|
9885 CKSUM 3655489519
|
|
9886 STATS LOCAL MSV -8.2137 0.71925
|
|
9887 STATS LOCAL VITERBI -9.4456 0.71925
|
|
9888 STATS LOCAL FORWARD -3.2467 0.71925
|
|
9889 HMM A C G T
|
|
9890 m->m m->i m->d i->m i->i d->m d->d
|
|
9891 COMPO 0.94751 1.95314 1.23648 1.71446
|
|
9892 1.38629 1.38629 1.38629 1.38629
|
|
9893 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
9894 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
|
|
9895 1.38629 1.38629 1.38629 1.38629
|
|
9896 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9897 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
|
|
9898 1.38629 1.38629 1.38629 1.38629
|
|
9899 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9900 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
|
|
9901 1.38629 1.38629 1.38629 1.38629
|
|
9902 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9903 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
|
|
9904 1.38629 1.38629 1.38629 1.38629
|
|
9905 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9906 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
9907 1.38629 1.38629 1.38629 1.38629
|
|
9908 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9909 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
|
|
9910 1.38629 1.38629 1.38629 1.38629
|
|
9911 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9912 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
|
|
9913 1.38629 1.38629 1.38629 1.38629
|
|
9914 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9915 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
9916 1.38629 1.38629 1.38629 1.38629
|
|
9917 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9918 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
|
|
9919 1.38629 1.38629 1.38629 1.38629
|
|
9920 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9921 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
9922 1.38629 1.38629 1.38629 1.38629
|
|
9923 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9924 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
|
|
9925 1.38629 1.38629 1.38629 1.38629
|
|
9926 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9927 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
|
|
9928 1.38629 1.38629 1.38629 1.38629
|
|
9929 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9930 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
|
|
9931 1.38629 1.38629 1.38629 1.38629
|
|
9932 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9933 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
|
|
9934 1.38629 1.38629 1.38629 1.38629
|
|
9935 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9936 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
|
|
9937 1.38629 1.38629 1.38629 1.38629
|
|
9938 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9939 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
|
|
9940 1.38629 1.38629 1.38629 1.38629
|
|
9941 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9942 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
9943 1.38629 1.38629 1.38629 1.38629
|
|
9944 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9945 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
|
|
9946 1.38629 1.38629 1.38629 1.38629
|
|
9947 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9948 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
9949 1.38629 1.38629 1.38629 1.38629
|
|
9950 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9951 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
|
|
9952 1.38629 1.38629 1.38629 1.38629
|
|
9953 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9954 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
|
|
9955 1.38629 1.38629 1.38629 1.38629
|
|
9956 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9957 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
|
|
9958 1.38629 1.38629 1.38629 1.38629
|
|
9959 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9960 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
9961 1.38629 1.38629 1.38629 1.38629
|
|
9962 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9963 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
9964 1.38629 1.38629 1.38629 1.38629
|
|
9965 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9966 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
|
|
9967 1.38629 1.38629 1.38629 1.38629
|
|
9968 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9969 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
|
|
9970 1.38629 1.38629 1.38629 1.38629
|
|
9971 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9972 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
|
|
9973 1.38629 1.38629 1.38629 1.38629
|
|
9974 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9975 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
|
|
9976 1.38629 1.38629 1.38629 1.38629
|
|
9977 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9978 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
|
|
9979 1.38629 1.38629 1.38629 1.38629
|
|
9980 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9981 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
|
|
9982 1.38629 1.38629 1.38629 1.38629
|
|
9983 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9984 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
|
|
9985 1.38629 1.38629 1.38629 1.38629
|
|
9986 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9987 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
9988 1.38629 1.38629 1.38629 1.38629
|
|
9989 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9990 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
|
|
9991 1.38629 1.38629 1.38629 1.38629
|
|
9992 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9993 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
9994 1.38629 1.38629 1.38629 1.38629
|
|
9995 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9996 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
9997 1.38629 1.38629 1.38629 1.38629
|
|
9998 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
9999 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
|
|
10000 1.38629 1.38629 1.38629 1.38629
|
|
10001 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10002 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
|
|
10003 1.38629 1.38629 1.38629 1.38629
|
|
10004 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10005 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
10006 1.38629 1.38629 1.38629 1.38629
|
|
10007 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10008 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
|
|
10009 1.38629 1.38629 1.38629 1.38629
|
|
10010 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10011 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
10012 1.38629 1.38629 1.38629 1.38629
|
|
10013 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10014 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
|
|
10015 1.38629 1.38629 1.38629 1.38629
|
|
10016 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10017 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
10018 1.38629 1.38629 1.38629 1.38629
|
|
10019 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10020 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
10021 1.38629 1.38629 1.38629 1.38629
|
|
10022 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10023 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
|
|
10024 1.38629 1.38629 1.38629 1.38629
|
|
10025 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10026 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
10027 1.38629 1.38629 1.38629 1.38629
|
|
10028 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10029 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
|
|
10030 1.38629 1.38629 1.38629 1.38629
|
|
10031 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10032 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
10033 1.38629 1.38629 1.38629 1.38629
|
|
10034 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10035 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
|
|
10036 1.38629 1.38629 1.38629 1.38629
|
|
10037 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10038 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
|
|
10039 1.38629 1.38629 1.38629 1.38629
|
|
10040 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10041 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
|
|
10042 1.38629 1.38629 1.38629 1.38629
|
|
10043 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10044 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
|
|
10045 1.38629 1.38629 1.38629 1.38629
|
|
10046 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10047 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
|
|
10048 1.38629 1.38629 1.38629 1.38629
|
|
10049 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10050 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
|
|
10051 1.38629 1.38629 1.38629 1.38629
|
|
10052 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10053 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
|
|
10054 1.38629 1.38629 1.38629 1.38629
|
|
10055 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10056 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
|
|
10057 1.38629 1.38629 1.38629 1.38629
|
|
10058 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10059 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
10060 1.38629 1.38629 1.38629 1.38629
|
|
10061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10062 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
|
|
10063 1.38629 1.38629 1.38629 1.38629
|
|
10064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10065 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
|
|
10066 1.38629 1.38629 1.38629 1.38629
|
|
10067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10068 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
10069 1.38629 1.38629 1.38629 1.38629
|
|
10070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10071 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
10072 1.38629 1.38629 1.38629 1.38629
|
|
10073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10074 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
|
|
10075 1.38629 1.38629 1.38629 1.38629
|
|
10076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10077 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
10078 1.38629 1.38629 1.38629 1.38629
|
|
10079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10080 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
10081 1.38629 1.38629 1.38629 1.38629
|
|
10082 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10083 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
|
|
10084 1.38629 1.38629 1.38629 1.38629
|
|
10085 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10086 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
10087 1.38629 1.38629 1.38629 1.38629
|
|
10088 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10089 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
|
|
10090 1.38629 1.38629 1.38629 1.38629
|
|
10091 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10092 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
|
|
10093 1.38629 1.38629 1.38629 1.38629
|
|
10094 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10095 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
|
|
10096 1.38629 1.38629 1.38629 1.38629
|
|
10097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10098 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
10099 1.38629 1.38629 1.38629 1.38629
|
|
10100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10101 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
|
|
10102 1.38629 1.38629 1.38629 1.38629
|
|
10103 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
10104 //
|
|
10105 HMMER3/f [3.2.1 | June 2018]
|
|
10106 NAME long.42.aln
|
|
10107 LENG 70
|
|
10108 MAXL 160
|
|
10109 ALPH DNA
|
|
10110 RF no
|
|
10111 MM no
|
|
10112 CONS yes
|
|
10113 CS no
|
|
10114 MAP yes
|
|
10115 DATE Tue May 28 13:12:03 2019
|
|
10116 NSEQ 2
|
|
10117 EFFN 2.000000
|
|
10118 CKSUM 1523439480
|
|
10119 STATS LOCAL MSV -7.9792 0.72102
|
|
10120 STATS LOCAL VITERBI -9.3053 0.72102
|
|
10121 STATS LOCAL FORWARD -3.4853 0.72102
|
|
10122 HMM A C G T
|
|
10123 m->m m->i m->d i->m i->i d->m d->d
|
|
10124 COMPO 1.25034 1.49541 1.52580 1.30200
|
|
10125 1.38629 1.38629 1.38629 1.38629
|
|
10126 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
10127 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
|
|
10128 1.38629 1.38629 1.38629 1.38629
|
|
10129 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10130 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
|
|
10131 1.38629 1.38629 1.38629 1.38629
|
|
10132 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10133 3 2.38910 2.82844 0.25233 2.62837 3 g - - -
|
|
10134 1.38629 1.38629 1.38629 1.38629
|
|
10135 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10136 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
|
|
10137 1.38629 1.38629 1.38629 1.38629
|
|
10138 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10139 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
|
|
10140 1.38629 1.38629 1.38629 1.38629
|
|
10141 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10142 6 2.46232 0.33808 2.58153 2.07174 6 c - - -
|
|
10143 1.38629 1.38629 1.38629 1.38629
|
|
10144 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10145 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
|
|
10146 1.38629 1.38629 1.38629 1.38629
|
|
10147 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10148 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
|
|
10149 1.38629 1.38629 1.38629 1.38629
|
|
10150 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10151 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
|
|
10152 1.38629 1.38629 1.38629 1.38629
|
|
10153 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10154 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
|
|
10155 1.38629 1.38629 1.38629 1.38629
|
|
10156 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10157 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
|
|
10158 1.38629 1.38629 1.38629 1.38629
|
|
10159 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10160 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
10161 1.38629 1.38629 1.38629 1.38629
|
|
10162 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10163 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
10164 1.38629 1.38629 1.38629 1.38629
|
|
10165 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10166 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
|
|
10167 1.38629 1.38629 1.38629 1.38629
|
|
10168 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10169 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
|
|
10170 1.38629 1.38629 1.38629 1.38629
|
|
10171 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10172 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
|
|
10173 1.38629 1.38629 1.38629 1.38629
|
|
10174 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10175 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
10176 1.38629 1.38629 1.38629 1.38629
|
|
10177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10178 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
10179 1.38629 1.38629 1.38629 1.38629
|
|
10180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10181 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
10182 1.38629 1.38629 1.38629 1.38629
|
|
10183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10184 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
|
|
10185 1.38629 1.38629 1.38629 1.38629
|
|
10186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10187 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
10188 1.38629 1.38629 1.38629 1.38629
|
|
10189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10190 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
|
|
10191 1.38629 1.38629 1.38629 1.38629
|
|
10192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10193 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
|
|
10194 1.38629 1.38629 1.38629 1.38629
|
|
10195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10196 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
|
|
10197 1.38629 1.38629 1.38629 1.38629
|
|
10198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10199 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
|
|
10200 1.38629 1.38629 1.38629 1.38629
|
|
10201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10202 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
|
|
10203 1.38629 1.38629 1.38629 1.38629
|
|
10204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10205 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
10206 1.38629 1.38629 1.38629 1.38629
|
|
10207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10208 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
10209 1.38629 1.38629 1.38629 1.38629
|
|
10210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10211 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
|
|
10212 1.38629 1.38629 1.38629 1.38629
|
|
10213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10214 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
|
|
10215 1.38629 1.38629 1.38629 1.38629
|
|
10216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10217 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
10218 1.38629 1.38629 1.38629 1.38629
|
|
10219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10220 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
10221 1.38629 1.38629 1.38629 1.38629
|
|
10222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10223 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
|
|
10224 1.38629 1.38629 1.38629 1.38629
|
|
10225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10226 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
|
|
10227 1.38629 1.38629 1.38629 1.38629
|
|
10228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10229 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
|
|
10230 1.38629 1.38629 1.38629 1.38629
|
|
10231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10232 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
|
|
10233 1.38629 1.38629 1.38629 1.38629
|
|
10234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10235 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
10236 1.38629 1.38629 1.38629 1.38629
|
|
10237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10238 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
10239 1.38629 1.38629 1.38629 1.38629
|
|
10240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10241 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
|
|
10242 1.38629 1.38629 1.38629 1.38629
|
|
10243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10244 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
10245 1.38629 1.38629 1.38629 1.38629
|
|
10246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10247 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
|
|
10248 1.38629 1.38629 1.38629 1.38629
|
|
10249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10250 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
10251 1.38629 1.38629 1.38629 1.38629
|
|
10252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10253 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
10254 1.38629 1.38629 1.38629 1.38629
|
|
10255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10256 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
|
|
10257 1.38629 1.38629 1.38629 1.38629
|
|
10258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10259 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
10260 1.38629 1.38629 1.38629 1.38629
|
|
10261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10262 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
|
|
10263 1.38629 1.38629 1.38629 1.38629
|
|
10264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10265 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
10266 1.38629 1.38629 1.38629 1.38629
|
|
10267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10268 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
|
|
10269 1.38629 1.38629 1.38629 1.38629
|
|
10270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10271 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
|
|
10272 1.38629 1.38629 1.38629 1.38629
|
|
10273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10274 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
10275 1.38629 1.38629 1.38629 1.38629
|
|
10276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10277 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
|
|
10278 1.38629 1.38629 1.38629 1.38629
|
|
10279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10280 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
|
|
10281 1.38629 1.38629 1.38629 1.38629
|
|
10282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10283 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
10284 1.38629 1.38629 1.38629 1.38629
|
|
10285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10286 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
|
|
10287 1.38629 1.38629 1.38629 1.38629
|
|
10288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10289 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
|
|
10290 1.38629 1.38629 1.38629 1.38629
|
|
10291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10292 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
10293 1.38629 1.38629 1.38629 1.38629
|
|
10294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10295 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
|
|
10296 1.38629 1.38629 1.38629 1.38629
|
|
10297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10298 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
|
|
10299 1.38629 1.38629 1.38629 1.38629
|
|
10300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10301 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
|
|
10302 1.38629 1.38629 1.38629 1.38629
|
|
10303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10304 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
10305 1.38629 1.38629 1.38629 1.38629
|
|
10306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10307 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
|
|
10308 1.38629 1.38629 1.38629 1.38629
|
|
10309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10310 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
|
|
10311 1.38629 1.38629 1.38629 1.38629
|
|
10312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10313 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
10314 1.38629 1.38629 1.38629 1.38629
|
|
10315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10316 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
|
|
10317 1.38629 1.38629 1.38629 1.38629
|
|
10318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10319 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
|
|
10320 1.38629 1.38629 1.38629 1.38629
|
|
10321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10322 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
|
|
10323 1.38629 1.38629 1.38629 1.38629
|
|
10324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10325 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
|
|
10326 1.38629 1.38629 1.38629 1.38629
|
|
10327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10328 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
|
|
10329 1.38629 1.38629 1.38629 1.38629
|
|
10330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10331 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
|
|
10332 1.38629 1.38629 1.38629 1.38629
|
|
10333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10334 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
10335 1.38629 1.38629 1.38629 1.38629
|
|
10336 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
10337 //
|
|
10338 HMMER3/f [3.2.1 | June 2018]
|
|
10339 NAME long.43.aln
|
|
10340 LENG 70
|
|
10341 MAXL 160
|
|
10342 ALPH DNA
|
|
10343 RF no
|
|
10344 MM no
|
|
10345 CONS yes
|
|
10346 CS no
|
|
10347 MAP yes
|
|
10348 DATE Tue May 28 13:12:02 2019
|
|
10349 NSEQ 2
|
|
10350 EFFN 2.000000
|
|
10351 CKSUM 3312512886
|
|
10352 STATS LOCAL MSV -7.8819 0.72002
|
|
10353 STATS LOCAL VITERBI -9.2757 0.72002
|
|
10354 STATS LOCAL FORWARD -3.4162 0.72002
|
|
10355 HMM A C G T
|
|
10356 m->m m->i m->d i->m i->i d->m d->d
|
|
10357 COMPO 1.16793 1.59743 1.30588 1.53415
|
|
10358 1.38629 1.38629 1.38629 1.38629
|
|
10359 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
10360 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
10361 1.38629 1.38629 1.38629 1.38629
|
|
10362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10363 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
|
|
10364 1.38629 1.38629 1.38629 1.38629
|
|
10365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10366 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
|
|
10367 1.38629 1.38629 1.38629 1.38629
|
|
10368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10369 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
|
|
10370 1.38629 1.38629 1.38629 1.38629
|
|
10371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10372 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
|
|
10373 1.38629 1.38629 1.38629 1.38629
|
|
10374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10375 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
10376 1.38629 1.38629 1.38629 1.38629
|
|
10377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10378 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
|
|
10379 1.38629 1.38629 1.38629 1.38629
|
|
10380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10381 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
|
|
10382 1.38629 1.38629 1.38629 1.38629
|
|
10383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10384 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
|
|
10385 1.38629 1.38629 1.38629 1.38629
|
|
10386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10387 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
10388 1.38629 1.38629 1.38629 1.38629
|
|
10389 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10390 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
|
|
10391 1.38629 1.38629 1.38629 1.38629
|
|
10392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10393 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
|
|
10394 1.38629 1.38629 1.38629 1.38629
|
|
10395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10396 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
10397 1.38629 1.38629 1.38629 1.38629
|
|
10398 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10399 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
|
|
10400 1.38629 1.38629 1.38629 1.38629
|
|
10401 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10402 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
|
|
10403 1.38629 1.38629 1.38629 1.38629
|
|
10404 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10405 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
10406 1.38629 1.38629 1.38629 1.38629
|
|
10407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10408 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
|
|
10409 1.38629 1.38629 1.38629 1.38629
|
|
10410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10411 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
10412 1.38629 1.38629 1.38629 1.38629
|
|
10413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10414 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
|
|
10415 1.38629 1.38629 1.38629 1.38629
|
|
10416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10417 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
|
|
10418 1.38629 1.38629 1.38629 1.38629
|
|
10419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10420 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
|
|
10421 1.38629 1.38629 1.38629 1.38629
|
|
10422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10423 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
10424 1.38629 1.38629 1.38629 1.38629
|
|
10425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10426 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
10427 1.38629 1.38629 1.38629 1.38629
|
|
10428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10429 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
|
|
10430 1.38629 1.38629 1.38629 1.38629
|
|
10431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10432 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
10433 1.38629 1.38629 1.38629 1.38629
|
|
10434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10435 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
|
|
10436 1.38629 1.38629 1.38629 1.38629
|
|
10437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10438 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
|
|
10439 1.38629 1.38629 1.38629 1.38629
|
|
10440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10441 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
10442 1.38629 1.38629 1.38629 1.38629
|
|
10443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10444 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
|
|
10445 1.38629 1.38629 1.38629 1.38629
|
|
10446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10447 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
|
|
10448 1.38629 1.38629 1.38629 1.38629
|
|
10449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10450 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
10451 1.38629 1.38629 1.38629 1.38629
|
|
10452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10453 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
10454 1.38629 1.38629 1.38629 1.38629
|
|
10455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10456 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
|
|
10457 1.38629 1.38629 1.38629 1.38629
|
|
10458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10459 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
|
|
10460 1.38629 1.38629 1.38629 1.38629
|
|
10461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10462 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
|
|
10463 1.38629 1.38629 1.38629 1.38629
|
|
10464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10465 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
|
|
10466 1.38629 1.38629 1.38629 1.38629
|
|
10467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10468 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
|
|
10469 1.38629 1.38629 1.38629 1.38629
|
|
10470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10471 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
|
|
10472 1.38629 1.38629 1.38629 1.38629
|
|
10473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10474 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
|
|
10475 1.38629 1.38629 1.38629 1.38629
|
|
10476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10477 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
10478 1.38629 1.38629 1.38629 1.38629
|
|
10479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10480 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
|
|
10481 1.38629 1.38629 1.38629 1.38629
|
|
10482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10483 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
10484 1.38629 1.38629 1.38629 1.38629
|
|
10485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10486 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
|
|
10487 1.38629 1.38629 1.38629 1.38629
|
|
10488 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10489 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
|
|
10490 1.38629 1.38629 1.38629 1.38629
|
|
10491 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10492 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
|
|
10493 1.38629 1.38629 1.38629 1.38629
|
|
10494 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10495 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
10496 1.38629 1.38629 1.38629 1.38629
|
|
10497 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10498 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
|
|
10499 1.38629 1.38629 1.38629 1.38629
|
|
10500 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10501 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
|
|
10502 1.38629 1.38629 1.38629 1.38629
|
|
10503 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10504 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
|
|
10505 1.38629 1.38629 1.38629 1.38629
|
|
10506 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10507 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
10508 1.38629 1.38629 1.38629 1.38629
|
|
10509 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10510 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
|
|
10511 1.38629 1.38629 1.38629 1.38629
|
|
10512 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10513 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
|
|
10514 1.38629 1.38629 1.38629 1.38629
|
|
10515 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10516 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
10517 1.38629 1.38629 1.38629 1.38629
|
|
10518 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10519 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
|
|
10520 1.38629 1.38629 1.38629 1.38629
|
|
10521 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10522 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
10523 1.38629 1.38629 1.38629 1.38629
|
|
10524 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10525 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
10526 1.38629 1.38629 1.38629 1.38629
|
|
10527 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10528 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
|
|
10529 1.38629 1.38629 1.38629 1.38629
|
|
10530 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10531 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
|
|
10532 1.38629 1.38629 1.38629 1.38629
|
|
10533 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10534 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
|
|
10535 1.38629 1.38629 1.38629 1.38629
|
|
10536 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10537 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
|
|
10538 1.38629 1.38629 1.38629 1.38629
|
|
10539 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10540 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
|
|
10541 1.38629 1.38629 1.38629 1.38629
|
|
10542 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10543 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
10544 1.38629 1.38629 1.38629 1.38629
|
|
10545 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10546 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
|
|
10547 1.38629 1.38629 1.38629 1.38629
|
|
10548 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10549 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
10550 1.38629 1.38629 1.38629 1.38629
|
|
10551 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10552 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
|
|
10553 1.38629 1.38629 1.38629 1.38629
|
|
10554 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10555 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
|
|
10556 1.38629 1.38629 1.38629 1.38629
|
|
10557 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10558 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
|
|
10559 1.38629 1.38629 1.38629 1.38629
|
|
10560 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10561 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
|
|
10562 1.38629 1.38629 1.38629 1.38629
|
|
10563 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10564 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
10565 1.38629 1.38629 1.38629 1.38629
|
|
10566 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10567 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
|
|
10568 1.38629 1.38629 1.38629 1.38629
|
|
10569 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
10570 //
|
|
10571 HMMER3/f [3.2.1 | June 2018]
|
|
10572 NAME long.44.aln
|
|
10573 LENG 70
|
|
10574 MAXL 160
|
|
10575 ALPH DNA
|
|
10576 RF no
|
|
10577 MM no
|
|
10578 CONS yes
|
|
10579 CS no
|
|
10580 MAP yes
|
|
10581 DATE Tue May 28 13:12:02 2019
|
|
10582 NSEQ 2
|
|
10583 EFFN 2.000000
|
|
10584 CKSUM 2374664696
|
|
10585 STATS LOCAL MSV -8.0688 0.72046
|
|
10586 STATS LOCAL VITERBI -9.1038 0.72046
|
|
10587 STATS LOCAL FORWARD -3.5428 0.72046
|
|
10588 HMM A C G T
|
|
10589 m->m m->i m->d i->m i->i d->m d->d
|
|
10590 COMPO 1.13770 1.75158 1.40669 1.34326
|
|
10591 1.38629 1.38629 1.38629 1.38629
|
|
10592 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
10593 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
|
|
10594 1.38629 1.38629 1.38629 1.38629
|
|
10595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10596 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
|
|
10597 1.38629 1.38629 1.38629 1.38629
|
|
10598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10599 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
|
|
10600 1.38629 1.38629 1.38629 1.38629
|
|
10601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10602 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
|
|
10603 1.38629 1.38629 1.38629 1.38629
|
|
10604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10605 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
|
|
10606 1.38629 1.38629 1.38629 1.38629
|
|
10607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10608 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
|
|
10609 1.38629 1.38629 1.38629 1.38629
|
|
10610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10611 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
|
|
10612 1.38629 1.38629 1.38629 1.38629
|
|
10613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10614 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
|
|
10615 1.38629 1.38629 1.38629 1.38629
|
|
10616 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10617 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
|
|
10618 1.38629 1.38629 1.38629 1.38629
|
|
10619 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10620 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
10621 1.38629 1.38629 1.38629 1.38629
|
|
10622 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10623 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
10624 1.38629 1.38629 1.38629 1.38629
|
|
10625 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10626 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
|
|
10627 1.38629 1.38629 1.38629 1.38629
|
|
10628 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10629 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
10630 1.38629 1.38629 1.38629 1.38629
|
|
10631 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10632 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
|
|
10633 1.38629 1.38629 1.38629 1.38629
|
|
10634 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10635 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
|
|
10636 1.38629 1.38629 1.38629 1.38629
|
|
10637 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10638 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
10639 1.38629 1.38629 1.38629 1.38629
|
|
10640 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10641 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
10642 1.38629 1.38629 1.38629 1.38629
|
|
10643 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10644 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
10645 1.38629 1.38629 1.38629 1.38629
|
|
10646 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10647 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
|
|
10648 1.38629 1.38629 1.38629 1.38629
|
|
10649 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10650 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
|
|
10651 1.38629 1.38629 1.38629 1.38629
|
|
10652 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10653 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
10654 1.38629 1.38629 1.38629 1.38629
|
|
10655 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10656 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
10657 1.38629 1.38629 1.38629 1.38629
|
|
10658 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10659 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
10660 1.38629 1.38629 1.38629 1.38629
|
|
10661 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10662 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
|
|
10663 1.38629 1.38629 1.38629 1.38629
|
|
10664 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10665 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
|
|
10666 1.38629 1.38629 1.38629 1.38629
|
|
10667 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10668 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
10669 1.38629 1.38629 1.38629 1.38629
|
|
10670 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10671 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
10672 1.38629 1.38629 1.38629 1.38629
|
|
10673 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10674 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
10675 1.38629 1.38629 1.38629 1.38629
|
|
10676 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10677 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
10678 1.38629 1.38629 1.38629 1.38629
|
|
10679 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10680 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
|
|
10681 1.38629 1.38629 1.38629 1.38629
|
|
10682 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10683 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
10684 1.38629 1.38629 1.38629 1.38629
|
|
10685 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10686 32 2.38910 2.82844 0.25233 2.62837 32 g - - -
|
|
10687 1.38629 1.38629 1.38629 1.38629
|
|
10688 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10689 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
|
|
10690 1.38629 1.38629 1.38629 1.38629
|
|
10691 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10692 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
10693 1.38629 1.38629 1.38629 1.38629
|
|
10694 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10695 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
|
|
10696 1.38629 1.38629 1.38629 1.38629
|
|
10697 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10698 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
|
|
10699 1.38629 1.38629 1.38629 1.38629
|
|
10700 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10701 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
|
|
10702 1.38629 1.38629 1.38629 1.38629
|
|
10703 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10704 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
|
|
10705 1.38629 1.38629 1.38629 1.38629
|
|
10706 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10707 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
|
|
10708 1.38629 1.38629 1.38629 1.38629
|
|
10709 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10710 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
10711 1.38629 1.38629 1.38629 1.38629
|
|
10712 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10713 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
10714 1.38629 1.38629 1.38629 1.38629
|
|
10715 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10716 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
|
|
10717 1.38629 1.38629 1.38629 1.38629
|
|
10718 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10719 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
10720 1.38629 1.38629 1.38629 1.38629
|
|
10721 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10722 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
10723 1.38629 1.38629 1.38629 1.38629
|
|
10724 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10725 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
|
|
10726 1.38629 1.38629 1.38629 1.38629
|
|
10727 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10728 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
10729 1.38629 1.38629 1.38629 1.38629
|
|
10730 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10731 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
10732 1.38629 1.38629 1.38629 1.38629
|
|
10733 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10734 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
|
|
10735 1.38629 1.38629 1.38629 1.38629
|
|
10736 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10737 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
|
|
10738 1.38629 1.38629 1.38629 1.38629
|
|
10739 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10740 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
|
|
10741 1.38629 1.38629 1.38629 1.38629
|
|
10742 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10743 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
10744 1.38629 1.38629 1.38629 1.38629
|
|
10745 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10746 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
|
|
10747 1.38629 1.38629 1.38629 1.38629
|
|
10748 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10749 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
|
|
10750 1.38629 1.38629 1.38629 1.38629
|
|
10751 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10752 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
|
|
10753 1.38629 1.38629 1.38629 1.38629
|
|
10754 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10755 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
|
|
10756 1.38629 1.38629 1.38629 1.38629
|
|
10757 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10758 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
10759 1.38629 1.38629 1.38629 1.38629
|
|
10760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10761 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
|
|
10762 1.38629 1.38629 1.38629 1.38629
|
|
10763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10764 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
10765 1.38629 1.38629 1.38629 1.38629
|
|
10766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10767 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
|
|
10768 1.38629 1.38629 1.38629 1.38629
|
|
10769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10770 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
10771 1.38629 1.38629 1.38629 1.38629
|
|
10772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10773 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
10774 1.38629 1.38629 1.38629 1.38629
|
|
10775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10776 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
10777 1.38629 1.38629 1.38629 1.38629
|
|
10778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10779 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
|
|
10780 1.38629 1.38629 1.38629 1.38629
|
|
10781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10782 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
|
|
10783 1.38629 1.38629 1.38629 1.38629
|
|
10784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10785 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
10786 1.38629 1.38629 1.38629 1.38629
|
|
10787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10788 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
|
|
10789 1.38629 1.38629 1.38629 1.38629
|
|
10790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10791 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
|
|
10792 1.38629 1.38629 1.38629 1.38629
|
|
10793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10794 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
|
|
10795 1.38629 1.38629 1.38629 1.38629
|
|
10796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10797 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
|
|
10798 1.38629 1.38629 1.38629 1.38629
|
|
10799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10800 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
|
|
10801 1.38629 1.38629 1.38629 1.38629
|
|
10802 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
10803 //
|
|
10804 HMMER3/f [3.2.1 | June 2018]
|
|
10805 NAME long.45.aln
|
|
10806 LENG 70
|
|
10807 MAXL 160
|
|
10808 ALPH DNA
|
|
10809 RF no
|
|
10810 MM no
|
|
10811 CONS yes
|
|
10812 CS no
|
|
10813 MAP yes
|
|
10814 DATE Tue May 28 13:12:03 2019
|
|
10815 NSEQ 2
|
|
10816 EFFN 2.000000
|
|
10817 CKSUM 4135045782
|
|
10818 STATS LOCAL MSV -8.0188 0.72034
|
|
10819 STATS LOCAL VITERBI -9.0748 0.72034
|
|
10820 STATS LOCAL FORWARD -3.4332 0.72034
|
|
10821 HMM A C G T
|
|
10822 m->m m->i m->d i->m i->i d->m d->d
|
|
10823 COMPO 1.11475 1.55081 1.44662 1.49361
|
|
10824 1.38629 1.38629 1.38629 1.38629
|
|
10825 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
10826 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
10827 1.38629 1.38629 1.38629 1.38629
|
|
10828 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10829 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
|
|
10830 1.38629 1.38629 1.38629 1.38629
|
|
10831 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10832 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
|
|
10833 1.38629 1.38629 1.38629 1.38629
|
|
10834 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10835 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
|
|
10836 1.38629 1.38629 1.38629 1.38629
|
|
10837 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10838 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
10839 1.38629 1.38629 1.38629 1.38629
|
|
10840 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10841 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
|
|
10842 1.38629 1.38629 1.38629 1.38629
|
|
10843 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10844 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
|
|
10845 1.38629 1.38629 1.38629 1.38629
|
|
10846 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10847 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
|
|
10848 1.38629 1.38629 1.38629 1.38629
|
|
10849 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10850 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
10851 1.38629 1.38629 1.38629 1.38629
|
|
10852 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10853 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
|
|
10854 1.38629 1.38629 1.38629 1.38629
|
|
10855 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10856 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
|
|
10857 1.38629 1.38629 1.38629 1.38629
|
|
10858 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10859 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
|
|
10860 1.38629 1.38629 1.38629 1.38629
|
|
10861 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10862 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
|
|
10863 1.38629 1.38629 1.38629 1.38629
|
|
10864 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10865 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
|
|
10866 1.38629 1.38629 1.38629 1.38629
|
|
10867 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10868 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
|
|
10869 1.38629 1.38629 1.38629 1.38629
|
|
10870 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10871 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
|
|
10872 1.38629 1.38629 1.38629 1.38629
|
|
10873 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10874 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
|
|
10875 1.38629 1.38629 1.38629 1.38629
|
|
10876 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10877 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
|
|
10878 1.38629 1.38629 1.38629 1.38629
|
|
10879 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10880 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
10881 1.38629 1.38629 1.38629 1.38629
|
|
10882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10883 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
|
|
10884 1.38629 1.38629 1.38629 1.38629
|
|
10885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10886 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
|
|
10887 1.38629 1.38629 1.38629 1.38629
|
|
10888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10889 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
10890 1.38629 1.38629 1.38629 1.38629
|
|
10891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10892 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
10893 1.38629 1.38629 1.38629 1.38629
|
|
10894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10895 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
10896 1.38629 1.38629 1.38629 1.38629
|
|
10897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10898 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
|
|
10899 1.38629 1.38629 1.38629 1.38629
|
|
10900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10901 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
10902 1.38629 1.38629 1.38629 1.38629
|
|
10903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10904 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
|
|
10905 1.38629 1.38629 1.38629 1.38629
|
|
10906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10907 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
|
|
10908 1.38629 1.38629 1.38629 1.38629
|
|
10909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10910 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
|
|
10911 1.38629 1.38629 1.38629 1.38629
|
|
10912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10913 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
|
|
10914 1.38629 1.38629 1.38629 1.38629
|
|
10915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10916 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
|
|
10917 1.38629 1.38629 1.38629 1.38629
|
|
10918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10919 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
|
|
10920 1.38629 1.38629 1.38629 1.38629
|
|
10921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10922 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
|
|
10923 1.38629 1.38629 1.38629 1.38629
|
|
10924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10925 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
|
|
10926 1.38629 1.38629 1.38629 1.38629
|
|
10927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10928 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
|
|
10929 1.38629 1.38629 1.38629 1.38629
|
|
10930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10931 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
|
|
10932 1.38629 1.38629 1.38629 1.38629
|
|
10933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10934 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
|
|
10935 1.38629 1.38629 1.38629 1.38629
|
|
10936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10937 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
10938 1.38629 1.38629 1.38629 1.38629
|
|
10939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10940 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
10941 1.38629 1.38629 1.38629 1.38629
|
|
10942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10943 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
|
|
10944 1.38629 1.38629 1.38629 1.38629
|
|
10945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10946 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
10947 1.38629 1.38629 1.38629 1.38629
|
|
10948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10949 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
10950 1.38629 1.38629 1.38629 1.38629
|
|
10951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10952 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
10953 1.38629 1.38629 1.38629 1.38629
|
|
10954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10955 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
|
|
10956 1.38629 1.38629 1.38629 1.38629
|
|
10957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10958 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
10959 1.38629 1.38629 1.38629 1.38629
|
|
10960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10961 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
|
|
10962 1.38629 1.38629 1.38629 1.38629
|
|
10963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10964 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
10965 1.38629 1.38629 1.38629 1.38629
|
|
10966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10967 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
|
|
10968 1.38629 1.38629 1.38629 1.38629
|
|
10969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10970 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
|
|
10971 1.38629 1.38629 1.38629 1.38629
|
|
10972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10973 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
10974 1.38629 1.38629 1.38629 1.38629
|
|
10975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10976 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
10977 1.38629 1.38629 1.38629 1.38629
|
|
10978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10979 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
|
|
10980 1.38629 1.38629 1.38629 1.38629
|
|
10981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10982 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
10983 1.38629 1.38629 1.38629 1.38629
|
|
10984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10985 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
10986 1.38629 1.38629 1.38629 1.38629
|
|
10987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10988 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
10989 1.38629 1.38629 1.38629 1.38629
|
|
10990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10991 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
10992 1.38629 1.38629 1.38629 1.38629
|
|
10993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10994 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
|
|
10995 1.38629 1.38629 1.38629 1.38629
|
|
10996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
10997 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
|
|
10998 1.38629 1.38629 1.38629 1.38629
|
|
10999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11000 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
11001 1.38629 1.38629 1.38629 1.38629
|
|
11002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11003 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
|
|
11004 1.38629 1.38629 1.38629 1.38629
|
|
11005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11006 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
11007 1.38629 1.38629 1.38629 1.38629
|
|
11008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11009 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
|
|
11010 1.38629 1.38629 1.38629 1.38629
|
|
11011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11012 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
|
|
11013 1.38629 1.38629 1.38629 1.38629
|
|
11014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11015 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
|
|
11016 1.38629 1.38629 1.38629 1.38629
|
|
11017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11018 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
11019 1.38629 1.38629 1.38629 1.38629
|
|
11020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11021 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
11022 1.38629 1.38629 1.38629 1.38629
|
|
11023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11024 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
|
|
11025 1.38629 1.38629 1.38629 1.38629
|
|
11026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11027 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
|
|
11028 1.38629 1.38629 1.38629 1.38629
|
|
11029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11030 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
|
|
11031 1.38629 1.38629 1.38629 1.38629
|
|
11032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11033 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
|
|
11034 1.38629 1.38629 1.38629 1.38629
|
|
11035 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
11036 //
|
|
11037 HMMER3/f [3.2.1 | June 2018]
|
|
11038 NAME long.46.aln
|
|
11039 LENG 70
|
|
11040 MAXL 160
|
|
11041 ALPH DNA
|
|
11042 RF no
|
|
11043 MM no
|
|
11044 CONS yes
|
|
11045 CS no
|
|
11046 MAP yes
|
|
11047 DATE Tue May 28 13:12:04 2019
|
|
11048 NSEQ 2
|
|
11049 EFFN 2.000000
|
|
11050 CKSUM 4194640144
|
|
11051 STATS LOCAL MSV -8.2586 0.72083
|
|
11052 STATS LOCAL VITERBI -9.2349 0.72083
|
|
11053 STATS LOCAL FORWARD -3.5611 0.72083
|
|
11054 HMM A C G T
|
|
11055 m->m m->i m->d i->m i->i d->m d->d
|
|
11056 COMPO 1.52180 1.56997 1.27094 1.22737
|
|
11057 1.38629 1.38629 1.38629 1.38629
|
|
11058 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
11059 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
|
|
11060 1.38629 1.38629 1.38629 1.38629
|
|
11061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11062 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
|
|
11063 1.38629 1.38629 1.38629 1.38629
|
|
11064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11065 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
|
|
11066 1.38629 1.38629 1.38629 1.38629
|
|
11067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11068 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
|
|
11069 1.38629 1.38629 1.38629 1.38629
|
|
11070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11071 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
11072 1.38629 1.38629 1.38629 1.38629
|
|
11073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11074 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
11075 1.38629 1.38629 1.38629 1.38629
|
|
11076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11077 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
|
|
11078 1.38629 1.38629 1.38629 1.38629
|
|
11079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11080 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
11081 1.38629 1.38629 1.38629 1.38629
|
|
11082 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11083 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
|
|
11084 1.38629 1.38629 1.38629 1.38629
|
|
11085 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11086 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
|
|
11087 1.38629 1.38629 1.38629 1.38629
|
|
11088 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11089 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
|
|
11090 1.38629 1.38629 1.38629 1.38629
|
|
11091 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11092 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
|
|
11093 1.38629 1.38629 1.38629 1.38629
|
|
11094 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11095 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
11096 1.38629 1.38629 1.38629 1.38629
|
|
11097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11098 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
|
|
11099 1.38629 1.38629 1.38629 1.38629
|
|
11100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11101 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
11102 1.38629 1.38629 1.38629 1.38629
|
|
11103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11104 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
|
|
11105 1.38629 1.38629 1.38629 1.38629
|
|
11106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11107 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
|
|
11108 1.38629 1.38629 1.38629 1.38629
|
|
11109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11110 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
11111 1.38629 1.38629 1.38629 1.38629
|
|
11112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11113 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
|
|
11114 1.38629 1.38629 1.38629 1.38629
|
|
11115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11116 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
|
|
11117 1.38629 1.38629 1.38629 1.38629
|
|
11118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11119 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
|
|
11120 1.38629 1.38629 1.38629 1.38629
|
|
11121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11122 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
11123 1.38629 1.38629 1.38629 1.38629
|
|
11124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11125 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
11126 1.38629 1.38629 1.38629 1.38629
|
|
11127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11128 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
|
|
11129 1.38629 1.38629 1.38629 1.38629
|
|
11130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11131 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
|
|
11132 1.38629 1.38629 1.38629 1.38629
|
|
11133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11134 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
|
|
11135 1.38629 1.38629 1.38629 1.38629
|
|
11136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11137 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
|
|
11138 1.38629 1.38629 1.38629 1.38629
|
|
11139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11140 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
|
|
11141 1.38629 1.38629 1.38629 1.38629
|
|
11142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11143 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
11144 1.38629 1.38629 1.38629 1.38629
|
|
11145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11146 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
|
|
11147 1.38629 1.38629 1.38629 1.38629
|
|
11148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11149 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
11150 1.38629 1.38629 1.38629 1.38629
|
|
11151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11152 32 2.38910 2.82844 0.25233 2.62837 32 g - - -
|
|
11153 1.38629 1.38629 1.38629 1.38629
|
|
11154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11155 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
|
|
11156 1.38629 1.38629 1.38629 1.38629
|
|
11157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11158 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
11159 1.38629 1.38629 1.38629 1.38629
|
|
11160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11161 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
11162 1.38629 1.38629 1.38629 1.38629
|
|
11163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11164 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
|
|
11165 1.38629 1.38629 1.38629 1.38629
|
|
11166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11167 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
11168 1.38629 1.38629 1.38629 1.38629
|
|
11169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11170 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
11171 1.38629 1.38629 1.38629 1.38629
|
|
11172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11173 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
|
|
11174 1.38629 1.38629 1.38629 1.38629
|
|
11175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11176 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
11177 1.38629 1.38629 1.38629 1.38629
|
|
11178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11179 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
|
|
11180 1.38629 1.38629 1.38629 1.38629
|
|
11181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11182 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
|
|
11183 1.38629 1.38629 1.38629 1.38629
|
|
11184 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11185 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
11186 1.38629 1.38629 1.38629 1.38629
|
|
11187 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11188 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
|
|
11189 1.38629 1.38629 1.38629 1.38629
|
|
11190 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11191 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
|
|
11192 1.38629 1.38629 1.38629 1.38629
|
|
11193 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11194 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
|
|
11195 1.38629 1.38629 1.38629 1.38629
|
|
11196 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11197 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
|
|
11198 1.38629 1.38629 1.38629 1.38629
|
|
11199 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11200 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
|
|
11201 1.38629 1.38629 1.38629 1.38629
|
|
11202 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11203 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
|
|
11204 1.38629 1.38629 1.38629 1.38629
|
|
11205 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11206 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
|
|
11207 1.38629 1.38629 1.38629 1.38629
|
|
11208 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11209 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
|
|
11210 1.38629 1.38629 1.38629 1.38629
|
|
11211 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11212 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
|
|
11213 1.38629 1.38629 1.38629 1.38629
|
|
11214 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11215 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
11216 1.38629 1.38629 1.38629 1.38629
|
|
11217 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11218 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
11219 1.38629 1.38629 1.38629 1.38629
|
|
11220 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11221 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
|
|
11222 1.38629 1.38629 1.38629 1.38629
|
|
11223 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11224 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
11225 1.38629 1.38629 1.38629 1.38629
|
|
11226 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11227 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
|
|
11228 1.38629 1.38629 1.38629 1.38629
|
|
11229 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11230 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
|
|
11231 1.38629 1.38629 1.38629 1.38629
|
|
11232 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11233 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
|
|
11234 1.38629 1.38629 1.38629 1.38629
|
|
11235 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11236 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
|
|
11237 1.38629 1.38629 1.38629 1.38629
|
|
11238 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11239 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
|
|
11240 1.38629 1.38629 1.38629 1.38629
|
|
11241 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11242 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
|
|
11243 1.38629 1.38629 1.38629 1.38629
|
|
11244 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11245 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
|
|
11246 1.38629 1.38629 1.38629 1.38629
|
|
11247 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11248 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
|
|
11249 1.38629 1.38629 1.38629 1.38629
|
|
11250 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11251 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
|
|
11252 1.38629 1.38629 1.38629 1.38629
|
|
11253 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11254 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
11255 1.38629 1.38629 1.38629 1.38629
|
|
11256 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11257 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
11258 1.38629 1.38629 1.38629 1.38629
|
|
11259 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11260 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
|
|
11261 1.38629 1.38629 1.38629 1.38629
|
|
11262 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11263 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
11264 1.38629 1.38629 1.38629 1.38629
|
|
11265 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11266 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
11267 1.38629 1.38629 1.38629 1.38629
|
|
11268 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
11269 //
|
|
11270 HMMER3/f [3.2.1 | June 2018]
|
|
11271 NAME long.47.aln
|
|
11272 LENG 70
|
|
11273 MAXL 160
|
|
11274 ALPH DNA
|
|
11275 RF no
|
|
11276 MM no
|
|
11277 CONS yes
|
|
11278 CS no
|
|
11279 MAP yes
|
|
11280 DATE Tue May 28 13:12:04 2019
|
|
11281 NSEQ 2
|
|
11282 EFFN 2.000000
|
|
11283 CKSUM 2191598282
|
|
11284 STATS LOCAL MSV -7.8363 0.71973
|
|
11285 STATS LOCAL VITERBI -9.1518 0.71973
|
|
11286 STATS LOCAL FORWARD -3.7787 0.71973
|
|
11287 HMM A C G T
|
|
11288 m->m m->i m->d i->m i->i d->m d->d
|
|
11289 COMPO 1.28422 1.64197 1.15255 1.54316
|
|
11290 1.38629 1.38629 1.38629 1.38629
|
|
11291 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
11292 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
|
|
11293 1.38629 1.38629 1.38629 1.38629
|
|
11294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11295 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
|
|
11296 1.38629 1.38629 1.38629 1.38629
|
|
11297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11298 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
|
|
11299 1.38629 1.38629 1.38629 1.38629
|
|
11300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11301 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
|
|
11302 1.38629 1.38629 1.38629 1.38629
|
|
11303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11304 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
|
|
11305 1.38629 1.38629 1.38629 1.38629
|
|
11306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11307 6 2.46232 0.33808 2.58153 2.07174 6 c - - -
|
|
11308 1.38629 1.38629 1.38629 1.38629
|
|
11309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11310 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
|
|
11311 1.38629 1.38629 1.38629 1.38629
|
|
11312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11313 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
11314 1.38629 1.38629 1.38629 1.38629
|
|
11315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11316 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
|
|
11317 1.38629 1.38629 1.38629 1.38629
|
|
11318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11319 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
|
|
11320 1.38629 1.38629 1.38629 1.38629
|
|
11321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11322 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
|
|
11323 1.38629 1.38629 1.38629 1.38629
|
|
11324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11325 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
11326 1.38629 1.38629 1.38629 1.38629
|
|
11327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11328 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
11329 1.38629 1.38629 1.38629 1.38629
|
|
11330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11331 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
|
|
11332 1.38629 1.38629 1.38629 1.38629
|
|
11333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11334 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
|
|
11335 1.38629 1.38629 1.38629 1.38629
|
|
11336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11337 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
11338 1.38629 1.38629 1.38629 1.38629
|
|
11339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11340 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
11341 1.38629 1.38629 1.38629 1.38629
|
|
11342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11343 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
|
|
11344 1.38629 1.38629 1.38629 1.38629
|
|
11345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11346 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
|
|
11347 1.38629 1.38629 1.38629 1.38629
|
|
11348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11349 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
|
|
11350 1.38629 1.38629 1.38629 1.38629
|
|
11351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11352 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
|
|
11353 1.38629 1.38629 1.38629 1.38629
|
|
11354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11355 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
|
|
11356 1.38629 1.38629 1.38629 1.38629
|
|
11357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11358 23 2.38910 2.82844 0.25233 2.62837 23 g - - -
|
|
11359 1.38629 1.38629 1.38629 1.38629
|
|
11360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11361 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
|
|
11362 1.38629 1.38629 1.38629 1.38629
|
|
11363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11364 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
|
|
11365 1.38629 1.38629 1.38629 1.38629
|
|
11366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11367 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
|
|
11368 1.38629 1.38629 1.38629 1.38629
|
|
11369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11370 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
11371 1.38629 1.38629 1.38629 1.38629
|
|
11372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11373 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
|
|
11374 1.38629 1.38629 1.38629 1.38629
|
|
11375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11376 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
|
|
11377 1.38629 1.38629 1.38629 1.38629
|
|
11378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11379 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
|
|
11380 1.38629 1.38629 1.38629 1.38629
|
|
11381 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11382 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
|
|
11383 1.38629 1.38629 1.38629 1.38629
|
|
11384 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11385 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
11386 1.38629 1.38629 1.38629 1.38629
|
|
11387 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11388 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
|
|
11389 1.38629 1.38629 1.38629 1.38629
|
|
11390 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11391 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
11392 1.38629 1.38629 1.38629 1.38629
|
|
11393 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11394 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
|
|
11395 1.38629 1.38629 1.38629 1.38629
|
|
11396 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11397 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
11398 1.38629 1.38629 1.38629 1.38629
|
|
11399 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11400 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
11401 1.38629 1.38629 1.38629 1.38629
|
|
11402 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11403 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
|
|
11404 1.38629 1.38629 1.38629 1.38629
|
|
11405 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11406 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
|
|
11407 1.38629 1.38629 1.38629 1.38629
|
|
11408 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11409 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
11410 1.38629 1.38629 1.38629 1.38629
|
|
11411 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11412 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
|
|
11413 1.38629 1.38629 1.38629 1.38629
|
|
11414 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11415 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
|
|
11416 1.38629 1.38629 1.38629 1.38629
|
|
11417 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11418 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
|
|
11419 1.38629 1.38629 1.38629 1.38629
|
|
11420 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11421 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
|
|
11422 1.38629 1.38629 1.38629 1.38629
|
|
11423 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11424 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
11425 1.38629 1.38629 1.38629 1.38629
|
|
11426 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11427 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
|
|
11428 1.38629 1.38629 1.38629 1.38629
|
|
11429 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11430 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
|
|
11431 1.38629 1.38629 1.38629 1.38629
|
|
11432 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11433 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
|
|
11434 1.38629 1.38629 1.38629 1.38629
|
|
11435 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11436 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
|
|
11437 1.38629 1.38629 1.38629 1.38629
|
|
11438 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11439 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
11440 1.38629 1.38629 1.38629 1.38629
|
|
11441 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11442 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
|
|
11443 1.38629 1.38629 1.38629 1.38629
|
|
11444 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11445 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
11446 1.38629 1.38629 1.38629 1.38629
|
|
11447 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11448 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
|
|
11449 1.38629 1.38629 1.38629 1.38629
|
|
11450 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11451 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
11452 1.38629 1.38629 1.38629 1.38629
|
|
11453 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11454 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
|
|
11455 1.38629 1.38629 1.38629 1.38629
|
|
11456 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11457 56 2.46232 0.33808 2.58153 2.07174 56 c - - -
|
|
11458 1.38629 1.38629 1.38629 1.38629
|
|
11459 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11460 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
|
|
11461 1.38629 1.38629 1.38629 1.38629
|
|
11462 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11463 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
11464 1.38629 1.38629 1.38629 1.38629
|
|
11465 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11466 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
|
|
11467 1.38629 1.38629 1.38629 1.38629
|
|
11468 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11469 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
|
|
11470 1.38629 1.38629 1.38629 1.38629
|
|
11471 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11472 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
11473 1.38629 1.38629 1.38629 1.38629
|
|
11474 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11475 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
11476 1.38629 1.38629 1.38629 1.38629
|
|
11477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11478 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
|
|
11479 1.38629 1.38629 1.38629 1.38629
|
|
11480 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11481 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
11482 1.38629 1.38629 1.38629 1.38629
|
|
11483 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11484 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
11485 1.38629 1.38629 1.38629 1.38629
|
|
11486 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11487 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
|
|
11488 1.38629 1.38629 1.38629 1.38629
|
|
11489 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11490 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
11491 1.38629 1.38629 1.38629 1.38629
|
|
11492 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11493 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
|
|
11494 1.38629 1.38629 1.38629 1.38629
|
|
11495 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11496 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
|
|
11497 1.38629 1.38629 1.38629 1.38629
|
|
11498 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11499 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
|
|
11500 1.38629 1.38629 1.38629 1.38629
|
|
11501 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
11502 //
|
|
11503 HMMER3/f [3.2.1 | June 2018]
|
|
11504 NAME long.48.aln
|
|
11505 LENG 70
|
|
11506 MAXL 160
|
|
11507 ALPH DNA
|
|
11508 RF no
|
|
11509 MM no
|
|
11510 CONS yes
|
|
11511 CS no
|
|
11512 MAP yes
|
|
11513 DATE Tue May 28 13:12:04 2019
|
|
11514 NSEQ 2
|
|
11515 EFFN 2.000000
|
|
11516 CKSUM 664434907
|
|
11517 STATS LOCAL MSV -7.9930 0.72119
|
|
11518 STATS LOCAL VITERBI -9.2272 0.72119
|
|
11519 STATS LOCAL FORWARD -3.6562 0.72119
|
|
11520 HMM A C G T
|
|
11521 m->m m->i m->d i->m i->i d->m d->d
|
|
11522 COMPO 1.41731 1.24184 1.53303 1.37475
|
|
11523 1.38629 1.38629 1.38629 1.38629
|
|
11524 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
11525 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
11526 1.38629 1.38629 1.38629 1.38629
|
|
11527 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11528 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
|
|
11529 1.38629 1.38629 1.38629 1.38629
|
|
11530 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11531 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
|
|
11532 1.38629 1.38629 1.38629 1.38629
|
|
11533 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11534 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
|
|
11535 1.38629 1.38629 1.38629 1.38629
|
|
11536 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11537 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
|
|
11538 1.38629 1.38629 1.38629 1.38629
|
|
11539 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11540 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
|
|
11541 1.38629 1.38629 1.38629 1.38629
|
|
11542 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11543 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
|
|
11544 1.38629 1.38629 1.38629 1.38629
|
|
11545 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11546 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
11547 1.38629 1.38629 1.38629 1.38629
|
|
11548 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11549 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
|
|
11550 1.38629 1.38629 1.38629 1.38629
|
|
11551 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11552 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
|
|
11553 1.38629 1.38629 1.38629 1.38629
|
|
11554 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11555 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
|
|
11556 1.38629 1.38629 1.38629 1.38629
|
|
11557 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11558 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
11559 1.38629 1.38629 1.38629 1.38629
|
|
11560 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11561 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
11562 1.38629 1.38629 1.38629 1.38629
|
|
11563 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11564 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
|
|
11565 1.38629 1.38629 1.38629 1.38629
|
|
11566 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11567 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
|
|
11568 1.38629 1.38629 1.38629 1.38629
|
|
11569 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11570 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
|
|
11571 1.38629 1.38629 1.38629 1.38629
|
|
11572 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11573 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
|
|
11574 1.38629 1.38629 1.38629 1.38629
|
|
11575 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11576 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
11577 1.38629 1.38629 1.38629 1.38629
|
|
11578 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11579 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
|
|
11580 1.38629 1.38629 1.38629 1.38629
|
|
11581 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11582 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
|
|
11583 1.38629 1.38629 1.38629 1.38629
|
|
11584 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11585 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
|
|
11586 1.38629 1.38629 1.38629 1.38629
|
|
11587 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11588 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
11589 1.38629 1.38629 1.38629 1.38629
|
|
11590 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11591 23 2.38910 2.82844 0.25233 2.62837 23 g - - -
|
|
11592 1.38629 1.38629 1.38629 1.38629
|
|
11593 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11594 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
11595 1.38629 1.38629 1.38629 1.38629
|
|
11596 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11597 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
|
|
11598 1.38629 1.38629 1.38629 1.38629
|
|
11599 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11600 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
11601 1.38629 1.38629 1.38629 1.38629
|
|
11602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11603 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
|
|
11604 1.38629 1.38629 1.38629 1.38629
|
|
11605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11606 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
|
|
11607 1.38629 1.38629 1.38629 1.38629
|
|
11608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11609 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
|
|
11610 1.38629 1.38629 1.38629 1.38629
|
|
11611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11612 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
|
|
11613 1.38629 1.38629 1.38629 1.38629
|
|
11614 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11615 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
|
|
11616 1.38629 1.38629 1.38629 1.38629
|
|
11617 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11618 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
11619 1.38629 1.38629 1.38629 1.38629
|
|
11620 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11621 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
|
|
11622 1.38629 1.38629 1.38629 1.38629
|
|
11623 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11624 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
11625 1.38629 1.38629 1.38629 1.38629
|
|
11626 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11627 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
|
|
11628 1.38629 1.38629 1.38629 1.38629
|
|
11629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11630 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
11631 1.38629 1.38629 1.38629 1.38629
|
|
11632 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11633 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
11634 1.38629 1.38629 1.38629 1.38629
|
|
11635 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11636 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
11637 1.38629 1.38629 1.38629 1.38629
|
|
11638 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11639 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
|
|
11640 1.38629 1.38629 1.38629 1.38629
|
|
11641 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11642 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
11643 1.38629 1.38629 1.38629 1.38629
|
|
11644 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11645 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
|
|
11646 1.38629 1.38629 1.38629 1.38629
|
|
11647 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11648 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
|
|
11649 1.38629 1.38629 1.38629 1.38629
|
|
11650 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11651 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
|
|
11652 1.38629 1.38629 1.38629 1.38629
|
|
11653 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11654 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
|
|
11655 1.38629 1.38629 1.38629 1.38629
|
|
11656 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11657 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
|
|
11658 1.38629 1.38629 1.38629 1.38629
|
|
11659 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11660 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
11661 1.38629 1.38629 1.38629 1.38629
|
|
11662 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11663 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
|
|
11664 1.38629 1.38629 1.38629 1.38629
|
|
11665 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11666 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
|
|
11667 1.38629 1.38629 1.38629 1.38629
|
|
11668 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11669 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
|
|
11670 1.38629 1.38629 1.38629 1.38629
|
|
11671 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11672 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
|
|
11673 1.38629 1.38629 1.38629 1.38629
|
|
11674 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11675 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
|
|
11676 1.38629 1.38629 1.38629 1.38629
|
|
11677 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11678 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
|
|
11679 1.38629 1.38629 1.38629 1.38629
|
|
11680 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11681 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
|
|
11682 1.38629 1.38629 1.38629 1.38629
|
|
11683 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11684 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
|
|
11685 1.38629 1.38629 1.38629 1.38629
|
|
11686 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11687 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
|
|
11688 1.38629 1.38629 1.38629 1.38629
|
|
11689 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11690 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
11691 1.38629 1.38629 1.38629 1.38629
|
|
11692 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11693 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
|
|
11694 1.38629 1.38629 1.38629 1.38629
|
|
11695 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11696 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
|
|
11697 1.38629 1.38629 1.38629 1.38629
|
|
11698 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11699 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
|
|
11700 1.38629 1.38629 1.38629 1.38629
|
|
11701 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11702 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
|
|
11703 1.38629 1.38629 1.38629 1.38629
|
|
11704 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11705 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
|
|
11706 1.38629 1.38629 1.38629 1.38629
|
|
11707 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11708 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
|
|
11709 1.38629 1.38629 1.38629 1.38629
|
|
11710 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11711 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
|
|
11712 1.38629 1.38629 1.38629 1.38629
|
|
11713 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11714 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
|
|
11715 1.38629 1.38629 1.38629 1.38629
|
|
11716 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11717 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
|
|
11718 1.38629 1.38629 1.38629 1.38629
|
|
11719 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11720 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
|
|
11721 1.38629 1.38629 1.38629 1.38629
|
|
11722 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11723 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
|
|
11724 1.38629 1.38629 1.38629 1.38629
|
|
11725 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11726 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
|
|
11727 1.38629 1.38629 1.38629 1.38629
|
|
11728 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11729 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
|
|
11730 1.38629 1.38629 1.38629 1.38629
|
|
11731 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11732 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
11733 1.38629 1.38629 1.38629 1.38629
|
|
11734 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
11735 //
|
|
11736 HMMER3/f [3.2.1 | June 2018]
|
|
11737 NAME long.49.aln
|
|
11738 LENG 70
|
|
11739 MAXL 160
|
|
11740 ALPH DNA
|
|
11741 RF no
|
|
11742 MM no
|
|
11743 CONS yes
|
|
11744 CS no
|
|
11745 MAP yes
|
|
11746 DATE Tue May 28 13:12:04 2019
|
|
11747 NSEQ 2
|
|
11748 EFFN 2.000000
|
|
11749 CKSUM 2518237207
|
|
11750 STATS LOCAL MSV -7.6534 0.71987
|
|
11751 STATS LOCAL VITERBI -9.2822 0.71987
|
|
11752 STATS LOCAL FORWARD -3.5503 0.71987
|
|
11753 HMM A C G T
|
|
11754 m->m m->i m->d i->m i->i d->m d->d
|
|
11755 COMPO 1.13983 1.68362 1.27304 1.53970
|
|
11756 1.38629 1.38629 1.38629 1.38629
|
|
11757 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
11758 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
|
|
11759 1.38629 1.38629 1.38629 1.38629
|
|
11760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11761 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
|
|
11762 1.38629 1.38629 1.38629 1.38629
|
|
11763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11764 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
|
|
11765 1.38629 1.38629 1.38629 1.38629
|
|
11766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11767 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
|
|
11768 1.38629 1.38629 1.38629 1.38629
|
|
11769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11770 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
|
|
11771 1.38629 1.38629 1.38629 1.38629
|
|
11772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11773 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
|
|
11774 1.38629 1.38629 1.38629 1.38629
|
|
11775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11776 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
|
|
11777 1.38629 1.38629 1.38629 1.38629
|
|
11778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11779 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
|
|
11780 1.38629 1.38629 1.38629 1.38629
|
|
11781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11782 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
11783 1.38629 1.38629 1.38629 1.38629
|
|
11784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11785 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
|
|
11786 1.38629 1.38629 1.38629 1.38629
|
|
11787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11788 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
|
|
11789 1.38629 1.38629 1.38629 1.38629
|
|
11790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11791 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
11792 1.38629 1.38629 1.38629 1.38629
|
|
11793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11794 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
11795 1.38629 1.38629 1.38629 1.38629
|
|
11796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11797 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
11798 1.38629 1.38629 1.38629 1.38629
|
|
11799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11800 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
|
|
11801 1.38629 1.38629 1.38629 1.38629
|
|
11802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11803 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
|
|
11804 1.38629 1.38629 1.38629 1.38629
|
|
11805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11806 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
|
|
11807 1.38629 1.38629 1.38629 1.38629
|
|
11808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11809 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
11810 1.38629 1.38629 1.38629 1.38629
|
|
11811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11812 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
|
|
11813 1.38629 1.38629 1.38629 1.38629
|
|
11814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11815 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
|
|
11816 1.38629 1.38629 1.38629 1.38629
|
|
11817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11818 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
11819 1.38629 1.38629 1.38629 1.38629
|
|
11820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11821 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
|
|
11822 1.38629 1.38629 1.38629 1.38629
|
|
11823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11824 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
|
|
11825 1.38629 1.38629 1.38629 1.38629
|
|
11826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11827 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
|
|
11828 1.38629 1.38629 1.38629 1.38629
|
|
11829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11830 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
|
|
11831 1.38629 1.38629 1.38629 1.38629
|
|
11832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11833 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
|
|
11834 1.38629 1.38629 1.38629 1.38629
|
|
11835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11836 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
11837 1.38629 1.38629 1.38629 1.38629
|
|
11838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11839 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
|
|
11840 1.38629 1.38629 1.38629 1.38629
|
|
11841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11842 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
11843 1.38629 1.38629 1.38629 1.38629
|
|
11844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11845 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
|
|
11846 1.38629 1.38629 1.38629 1.38629
|
|
11847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11848 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
|
|
11849 1.38629 1.38629 1.38629 1.38629
|
|
11850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11851 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
11852 1.38629 1.38629 1.38629 1.38629
|
|
11853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11854 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
|
|
11855 1.38629 1.38629 1.38629 1.38629
|
|
11856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11857 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
|
|
11858 1.38629 1.38629 1.38629 1.38629
|
|
11859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11860 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
|
|
11861 1.38629 1.38629 1.38629 1.38629
|
|
11862 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11863 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
|
|
11864 1.38629 1.38629 1.38629 1.38629
|
|
11865 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11866 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
|
|
11867 1.38629 1.38629 1.38629 1.38629
|
|
11868 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11869 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
|
|
11870 1.38629 1.38629 1.38629 1.38629
|
|
11871 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11872 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
|
|
11873 1.38629 1.38629 1.38629 1.38629
|
|
11874 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11875 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
11876 1.38629 1.38629 1.38629 1.38629
|
|
11877 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11878 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
11879 1.38629 1.38629 1.38629 1.38629
|
|
11880 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11881 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
|
|
11882 1.38629 1.38629 1.38629 1.38629
|
|
11883 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11884 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
11885 1.38629 1.38629 1.38629 1.38629
|
|
11886 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11887 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
11888 1.38629 1.38629 1.38629 1.38629
|
|
11889 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11890 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
|
|
11891 1.38629 1.38629 1.38629 1.38629
|
|
11892 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11893 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
|
|
11894 1.38629 1.38629 1.38629 1.38629
|
|
11895 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11896 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
|
|
11897 1.38629 1.38629 1.38629 1.38629
|
|
11898 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11899 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
|
|
11900 1.38629 1.38629 1.38629 1.38629
|
|
11901 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11902 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
|
|
11903 1.38629 1.38629 1.38629 1.38629
|
|
11904 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11905 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
|
|
11906 1.38629 1.38629 1.38629 1.38629
|
|
11907 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11908 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
11909 1.38629 1.38629 1.38629 1.38629
|
|
11910 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11911 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
|
|
11912 1.38629 1.38629 1.38629 1.38629
|
|
11913 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11914 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
|
|
11915 1.38629 1.38629 1.38629 1.38629
|
|
11916 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11917 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
|
|
11918 1.38629 1.38629 1.38629 1.38629
|
|
11919 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11920 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
|
|
11921 1.38629 1.38629 1.38629 1.38629
|
|
11922 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11923 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
11924 1.38629 1.38629 1.38629 1.38629
|
|
11925 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11926 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
|
|
11927 1.38629 1.38629 1.38629 1.38629
|
|
11928 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11929 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
|
|
11930 1.38629 1.38629 1.38629 1.38629
|
|
11931 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11932 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
|
|
11933 1.38629 1.38629 1.38629 1.38629
|
|
11934 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11935 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
11936 1.38629 1.38629 1.38629 1.38629
|
|
11937 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11938 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
|
|
11939 1.38629 1.38629 1.38629 1.38629
|
|
11940 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11941 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
|
|
11942 1.38629 1.38629 1.38629 1.38629
|
|
11943 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11944 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
11945 1.38629 1.38629 1.38629 1.38629
|
|
11946 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11947 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
|
|
11948 1.38629 1.38629 1.38629 1.38629
|
|
11949 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11950 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
|
|
11951 1.38629 1.38629 1.38629 1.38629
|
|
11952 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11953 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
|
|
11954 1.38629 1.38629 1.38629 1.38629
|
|
11955 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11956 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
11957 1.38629 1.38629 1.38629 1.38629
|
|
11958 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11959 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
|
|
11960 1.38629 1.38629 1.38629 1.38629
|
|
11961 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11962 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
11963 1.38629 1.38629 1.38629 1.38629
|
|
11964 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11965 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
|
|
11966 1.38629 1.38629 1.38629 1.38629
|
|
11967 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
11968 //
|
|
11969 HMMER3/f [3.2.1 | June 2018]
|
|
11970 NAME long.50.aln
|
|
11971 LENG 70
|
|
11972 MAXL 160
|
|
11973 ALPH DNA
|
|
11974 RF no
|
|
11975 MM no
|
|
11976 CONS yes
|
|
11977 CS no
|
|
11978 MAP yes
|
|
11979 DATE Tue May 28 13:12:04 2019
|
|
11980 NSEQ 2
|
|
11981 EFFN 2.000000
|
|
11982 CKSUM 3932738091
|
|
11983 STATS LOCAL MSV -8.6318 0.72054
|
|
11984 STATS LOCAL VITERBI -9.7767 0.72054
|
|
11985 STATS LOCAL FORWARD -3.3478 0.72054
|
|
11986 HMM A C G T
|
|
11987 m->m m->i m->d i->m i->i d->m d->d
|
|
11988 COMPO 1.06228 1.66134 1.52409 1.39987
|
|
11989 1.38629 1.38629 1.38629 1.38629
|
|
11990 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
11991 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
|
|
11992 1.38629 1.38629 1.38629 1.38629
|
|
11993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11994 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
|
|
11995 1.38629 1.38629 1.38629 1.38629
|
|
11996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
11997 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
|
|
11998 1.38629 1.38629 1.38629 1.38629
|
|
11999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12000 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
|
|
12001 1.38629 1.38629 1.38629 1.38629
|
|
12002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12003 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
|
|
12004 1.38629 1.38629 1.38629 1.38629
|
|
12005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12006 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
12007 1.38629 1.38629 1.38629 1.38629
|
|
12008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12009 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
|
|
12010 1.38629 1.38629 1.38629 1.38629
|
|
12011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12012 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
12013 1.38629 1.38629 1.38629 1.38629
|
|
12014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12015 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
12016 1.38629 1.38629 1.38629 1.38629
|
|
12017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12018 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
|
|
12019 1.38629 1.38629 1.38629 1.38629
|
|
12020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12021 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
|
|
12022 1.38629 1.38629 1.38629 1.38629
|
|
12023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12024 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
12025 1.38629 1.38629 1.38629 1.38629
|
|
12026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12027 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
|
|
12028 1.38629 1.38629 1.38629 1.38629
|
|
12029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12030 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
12031 1.38629 1.38629 1.38629 1.38629
|
|
12032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12033 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
12034 1.38629 1.38629 1.38629 1.38629
|
|
12035 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12036 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
|
|
12037 1.38629 1.38629 1.38629 1.38629
|
|
12038 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12039 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
12040 1.38629 1.38629 1.38629 1.38629
|
|
12041 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12042 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
12043 1.38629 1.38629 1.38629 1.38629
|
|
12044 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12045 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
|
|
12046 1.38629 1.38629 1.38629 1.38629
|
|
12047 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12048 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
|
|
12049 1.38629 1.38629 1.38629 1.38629
|
|
12050 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12051 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
12052 1.38629 1.38629 1.38629 1.38629
|
|
12053 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12054 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
12055 1.38629 1.38629 1.38629 1.38629
|
|
12056 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12057 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
12058 1.38629 1.38629 1.38629 1.38629
|
|
12059 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12060 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
12061 1.38629 1.38629 1.38629 1.38629
|
|
12062 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12063 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
|
|
12064 1.38629 1.38629 1.38629 1.38629
|
|
12065 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12066 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
12067 1.38629 1.38629 1.38629 1.38629
|
|
12068 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12069 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
12070 1.38629 1.38629 1.38629 1.38629
|
|
12071 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12072 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
|
|
12073 1.38629 1.38629 1.38629 1.38629
|
|
12074 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12075 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
12076 1.38629 1.38629 1.38629 1.38629
|
|
12077 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12078 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
|
|
12079 1.38629 1.38629 1.38629 1.38629
|
|
12080 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12081 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
12082 1.38629 1.38629 1.38629 1.38629
|
|
12083 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12084 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
12085 1.38629 1.38629 1.38629 1.38629
|
|
12086 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12087 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
|
|
12088 1.38629 1.38629 1.38629 1.38629
|
|
12089 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12090 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
|
|
12091 1.38629 1.38629 1.38629 1.38629
|
|
12092 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12093 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
12094 1.38629 1.38629 1.38629 1.38629
|
|
12095 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12096 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
|
|
12097 1.38629 1.38629 1.38629 1.38629
|
|
12098 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12099 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
|
|
12100 1.38629 1.38629 1.38629 1.38629
|
|
12101 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12102 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
12103 1.38629 1.38629 1.38629 1.38629
|
|
12104 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12105 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
|
|
12106 1.38629 1.38629 1.38629 1.38629
|
|
12107 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12108 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
|
|
12109 1.38629 1.38629 1.38629 1.38629
|
|
12110 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12111 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
|
|
12112 1.38629 1.38629 1.38629 1.38629
|
|
12113 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12114 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
12115 1.38629 1.38629 1.38629 1.38629
|
|
12116 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12117 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
12118 1.38629 1.38629 1.38629 1.38629
|
|
12119 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12120 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
12121 1.38629 1.38629 1.38629 1.38629
|
|
12122 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12123 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
12124 1.38629 1.38629 1.38629 1.38629
|
|
12125 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12126 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
|
|
12127 1.38629 1.38629 1.38629 1.38629
|
|
12128 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12129 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
|
|
12130 1.38629 1.38629 1.38629 1.38629
|
|
12131 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12132 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
|
|
12133 1.38629 1.38629 1.38629 1.38629
|
|
12134 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12135 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
|
|
12136 1.38629 1.38629 1.38629 1.38629
|
|
12137 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12138 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
12139 1.38629 1.38629 1.38629 1.38629
|
|
12140 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12141 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
12142 1.38629 1.38629 1.38629 1.38629
|
|
12143 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12144 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
|
|
12145 1.38629 1.38629 1.38629 1.38629
|
|
12146 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12147 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
|
|
12148 1.38629 1.38629 1.38629 1.38629
|
|
12149 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12150 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
12151 1.38629 1.38629 1.38629 1.38629
|
|
12152 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12153 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
12154 1.38629 1.38629 1.38629 1.38629
|
|
12155 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12156 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
12157 1.38629 1.38629 1.38629 1.38629
|
|
12158 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12159 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
|
|
12160 1.38629 1.38629 1.38629 1.38629
|
|
12161 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12162 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
|
|
12163 1.38629 1.38629 1.38629 1.38629
|
|
12164 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12165 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
|
|
12166 1.38629 1.38629 1.38629 1.38629
|
|
12167 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12168 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
|
|
12169 1.38629 1.38629 1.38629 1.38629
|
|
12170 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12171 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
|
|
12172 1.38629 1.38629 1.38629 1.38629
|
|
12173 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12174 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
12175 1.38629 1.38629 1.38629 1.38629
|
|
12176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12177 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
|
|
12178 1.38629 1.38629 1.38629 1.38629
|
|
12179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12180 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
12181 1.38629 1.38629 1.38629 1.38629
|
|
12182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12183 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
|
|
12184 1.38629 1.38629 1.38629 1.38629
|
|
12185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12186 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
|
|
12187 1.38629 1.38629 1.38629 1.38629
|
|
12188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12189 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
12190 1.38629 1.38629 1.38629 1.38629
|
|
12191 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12192 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
|
|
12193 1.38629 1.38629 1.38629 1.38629
|
|
12194 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12195 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
|
|
12196 1.38629 1.38629 1.38629 1.38629
|
|
12197 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12198 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
|
|
12199 1.38629 1.38629 1.38629 1.38629
|
|
12200 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
12201 //
|
|
12202 HMMER3/f [3.2.1 | June 2018]
|
|
12203 NAME long.51.aln
|
|
12204 LENG 76
|
|
12205 MAXL 168
|
|
12206 ALPH DNA
|
|
12207 RF no
|
|
12208 MM no
|
|
12209 CONS yes
|
|
12210 CS no
|
|
12211 MAP yes
|
|
12212 DATE Tue May 28 13:12:04 2019
|
|
12213 NSEQ 2
|
|
12214 EFFN 2.000000
|
|
12215 CKSUM 3988988039
|
|
12216 STATS LOCAL MSV -8.1442 0.72049
|
|
12217 STATS LOCAL VITERBI -9.4670 0.72049
|
|
12218 STATS LOCAL FORWARD -3.5137 0.72049
|
|
12219 HMM A C G T
|
|
12220 m->m m->i m->d i->m i->i d->m d->d
|
|
12221 COMPO 1.10127 1.65526 1.33843 1.54060
|
|
12222 1.38629 1.38629 1.38629 1.38629
|
|
12223 0.33647 3.73767 1.33977 1.46634 0.26236 0.00000 *
|
|
12224 1 1.98342 0.60779 2.04641 1.66785 1 c - - -
|
|
12225 1.38629 1.38629 1.38629 1.38629
|
|
12226 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
12227 2 0.56139 2.08489 1.86185 1.89791 2 a - - -
|
|
12228 1.38629 1.38629 1.38629 1.38629
|
|
12229 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
12230 3 1.98342 0.60779 2.04641 1.66785 3 c - - -
|
|
12231 1.38629 1.38629 1.38629 1.38629
|
|
12232 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
12233 4 1.91091 1.78233 1.95844 0.61114 4 t - - -
|
|
12234 1.38629 1.38629 1.38629 1.38629
|
|
12235 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
12236 5 1.91091 1.78233 1.95844 0.61114 5 t - - -
|
|
12237 1.38629 1.38629 1.38629 1.38629
|
|
12238 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
12239 6 0.56139 2.08489 1.86185 1.89791 6 a - - -
|
|
12240 1.38629 1.38629 1.38629 1.38629
|
|
12241 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
|
|
12242 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
12243 1.38629 1.38629 1.38629 1.38629
|
|
12244 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12245 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
12246 1.38629 1.38629 1.38629 1.38629
|
|
12247 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12248 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
12249 1.38629 1.38629 1.38629 1.38629
|
|
12250 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12251 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
12252 1.38629 1.38629 1.38629 1.38629
|
|
12253 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12254 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
|
|
12255 1.38629 1.38629 1.38629 1.38629
|
|
12256 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12257 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
12258 1.38629 1.38629 1.38629 1.38629
|
|
12259 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12260 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
|
|
12261 1.38629 1.38629 1.38629 1.38629
|
|
12262 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12263 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
|
|
12264 1.38629 1.38629 1.38629 1.38629
|
|
12265 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12266 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
12267 1.38629 1.38629 1.38629 1.38629
|
|
12268 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12269 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
12270 1.38629 1.38629 1.38629 1.38629
|
|
12271 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12272 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
12273 1.38629 1.38629 1.38629 1.38629
|
|
12274 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12275 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
|
|
12276 1.38629 1.38629 1.38629 1.38629
|
|
12277 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12278 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
|
|
12279 1.38629 1.38629 1.38629 1.38629
|
|
12280 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12281 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
|
|
12282 1.38629 1.38629 1.38629 1.38629
|
|
12283 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12284 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
|
|
12285 1.38629 1.38629 1.38629 1.38629
|
|
12286 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12287 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
|
|
12288 1.38629 1.38629 1.38629 1.38629
|
|
12289 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12290 23 2.38910 2.82844 0.25233 2.62837 23 g - - -
|
|
12291 1.38629 1.38629 1.38629 1.38629
|
|
12292 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12293 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
12294 1.38629 1.38629 1.38629 1.38629
|
|
12295 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12296 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
12297 1.38629 1.38629 1.38629 1.38629
|
|
12298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12299 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
12300 1.38629 1.38629 1.38629 1.38629
|
|
12301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12302 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
|
|
12303 1.38629 1.38629 1.38629 1.38629
|
|
12304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12305 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
|
|
12306 1.38629 1.38629 1.38629 1.38629
|
|
12307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12308 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
|
|
12309 1.38629 1.38629 1.38629 1.38629
|
|
12310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12311 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
|
|
12312 1.38629 1.38629 1.38629 1.38629
|
|
12313 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12314 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
|
|
12315 1.38629 1.38629 1.38629 1.38629
|
|
12316 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12317 32 2.38910 2.82844 0.25233 2.62837 32 g - - -
|
|
12318 1.38629 1.38629 1.38629 1.38629
|
|
12319 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12320 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
|
|
12321 1.38629 1.38629 1.38629 1.38629
|
|
12322 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12323 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
|
|
12324 1.38629 1.38629 1.38629 1.38629
|
|
12325 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12326 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
12327 1.38629 1.38629 1.38629 1.38629
|
|
12328 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12329 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
|
|
12330 1.38629 1.38629 1.38629 1.38629
|
|
12331 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12332 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
|
|
12333 1.38629 1.38629 1.38629 1.38629
|
|
12334 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12335 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
12336 1.38629 1.38629 1.38629 1.38629
|
|
12337 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12338 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
12339 1.38629 1.38629 1.38629 1.38629
|
|
12340 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12341 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
|
|
12342 1.38629 1.38629 1.38629 1.38629
|
|
12343 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12344 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
|
|
12345 1.38629 1.38629 1.38629 1.38629
|
|
12346 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12347 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
|
|
12348 1.38629 1.38629 1.38629 1.38629
|
|
12349 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12350 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
12351 1.38629 1.38629 1.38629 1.38629
|
|
12352 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12353 44 1.88401 1.14290 1.03416 1.75097 44 g - - -
|
|
12354 1.38629 1.38629 1.38629 1.38629
|
|
12355 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12356 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
|
|
12357 1.38629 1.38629 1.38629 1.38629
|
|
12358 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12359 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
|
|
12360 1.38629 1.38629 1.38629 1.38629
|
|
12361 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12362 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
12363 1.38629 1.38629 1.38629 1.38629
|
|
12364 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12365 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
|
|
12366 1.38629 1.38629 1.38629 1.38629
|
|
12367 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12368 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
|
|
12369 1.38629 1.38629 1.38629 1.38629
|
|
12370 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12371 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
|
|
12372 1.38629 1.38629 1.38629 1.38629
|
|
12373 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12374 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
12375 1.38629 1.38629 1.38629 1.38629
|
|
12376 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12377 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
12378 1.38629 1.38629 1.38629 1.38629
|
|
12379 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12380 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
|
|
12381 1.38629 1.38629 1.38629 1.38629
|
|
12382 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12383 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
12384 1.38629 1.38629 1.38629 1.38629
|
|
12385 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12386 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
|
|
12387 1.38629 1.38629 1.38629 1.38629
|
|
12388 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12389 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
12390 1.38629 1.38629 1.38629 1.38629
|
|
12391 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12392 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
|
|
12393 1.38629 1.38629 1.38629 1.38629
|
|
12394 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12395 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
|
|
12396 1.38629 1.38629 1.38629 1.38629
|
|
12397 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12398 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
12399 1.38629 1.38629 1.38629 1.38629
|
|
12400 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12401 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
|
|
12402 1.38629 1.38629 1.38629 1.38629
|
|
12403 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12404 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
12405 1.38629 1.38629 1.38629 1.38629
|
|
12406 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12407 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
|
|
12408 1.38629 1.38629 1.38629 1.38629
|
|
12409 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12410 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
|
|
12411 1.38629 1.38629 1.38629 1.38629
|
|
12412 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12413 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
12414 1.38629 1.38629 1.38629 1.38629
|
|
12415 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12416 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
|
|
12417 1.38629 1.38629 1.38629 1.38629
|
|
12418 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12419 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
12420 1.38629 1.38629 1.38629 1.38629
|
|
12421 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12422 67 2.38910 2.82844 0.25233 2.62837 67 g - - -
|
|
12423 1.38629 1.38629 1.38629 1.38629
|
|
12424 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12425 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
|
|
12426 1.38629 1.38629 1.38629 1.38629
|
|
12427 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12428 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
|
|
12429 1.38629 1.38629 1.38629 1.38629
|
|
12430 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12431 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
|
|
12432 1.38629 1.38629 1.38629 1.38629
|
|
12433 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
|
|
12434 71 1.91091 1.78233 1.95844 0.61114 71 t - - -
|
|
12435 1.38629 1.38629 1.38629 1.38629
|
|
12436 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
12437 72 1.97267 2.25870 0.46443 2.05625 72 g - - -
|
|
12438 1.38629 1.38629 1.38629 1.38629
|
|
12439 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
12440 73 0.56139 2.08489 1.86185 1.89791 73 a - - -
|
|
12441 1.38629 1.38629 1.38629 1.38629
|
|
12442 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
12443 74 1.97267 2.25870 0.46443 2.05625 74 g - - -
|
|
12444 1.38629 1.38629 1.38629 1.38629
|
|
12445 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
12446 75 1.97267 2.25870 0.46443 2.05625 75 g - - -
|
|
12447 1.38629 1.38629 1.38629 1.38629
|
|
12448 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
12449 76 0.56139 2.08489 1.86185 1.89791 76 a - - -
|
|
12450 1.38629 1.38629 1.38629 1.38629
|
|
12451 0.03279 3.43399 * 1.46634 0.26236 0.00000 *
|
|
12452 //
|
|
12453 HMMER3/f [3.2.1 | June 2018]
|
|
12454 NAME long.52.aln
|
|
12455 LENG 70
|
|
12456 MAXL 160
|
|
12457 ALPH DNA
|
|
12458 RF no
|
|
12459 MM no
|
|
12460 CONS yes
|
|
12461 CS no
|
|
12462 MAP yes
|
|
12463 DATE Tue May 28 13:12:03 2019
|
|
12464 NSEQ 2
|
|
12465 EFFN 2.000000
|
|
12466 CKSUM 62394181
|
|
12467 STATS LOCAL MSV -8.0100 0.72072
|
|
12468 STATS LOCAL VITERBI -9.3118 0.72072
|
|
12469 STATS LOCAL FORWARD -3.5566 0.72072
|
|
12470 HMM A C G T
|
|
12471 m->m m->i m->d i->m i->i d->m d->d
|
|
12472 COMPO 1.38092 1.39925 1.37704 1.38812
|
|
12473 1.38629 1.38629 1.38629 1.38629
|
|
12474 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
12475 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
|
|
12476 1.38629 1.38629 1.38629 1.38629
|
|
12477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12478 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
|
|
12479 1.38629 1.38629 1.38629 1.38629
|
|
12480 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12481 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
|
|
12482 1.38629 1.38629 1.38629 1.38629
|
|
12483 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12484 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
|
|
12485 1.38629 1.38629 1.38629 1.38629
|
|
12486 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12487 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
12488 1.38629 1.38629 1.38629 1.38629
|
|
12489 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12490 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
|
|
12491 1.38629 1.38629 1.38629 1.38629
|
|
12492 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12493 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
|
|
12494 1.38629 1.38629 1.38629 1.38629
|
|
12495 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12496 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
|
|
12497 1.38629 1.38629 1.38629 1.38629
|
|
12498 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12499 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
12500 1.38629 1.38629 1.38629 1.38629
|
|
12501 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12502 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
|
|
12503 1.38629 1.38629 1.38629 1.38629
|
|
12504 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12505 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
12506 1.38629 1.38629 1.38629 1.38629
|
|
12507 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12508 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
|
|
12509 1.38629 1.38629 1.38629 1.38629
|
|
12510 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12511 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
|
|
12512 1.38629 1.38629 1.38629 1.38629
|
|
12513 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12514 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
|
|
12515 1.38629 1.38629 1.38629 1.38629
|
|
12516 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12517 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
|
|
12518 1.38629 1.38629 1.38629 1.38629
|
|
12519 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12520 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
|
|
12521 1.38629 1.38629 1.38629 1.38629
|
|
12522 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12523 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
|
|
12524 1.38629 1.38629 1.38629 1.38629
|
|
12525 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12526 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
12527 1.38629 1.38629 1.38629 1.38629
|
|
12528 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12529 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
|
|
12530 1.38629 1.38629 1.38629 1.38629
|
|
12531 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12532 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
|
|
12533 1.38629 1.38629 1.38629 1.38629
|
|
12534 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12535 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
|
|
12536 1.38629 1.38629 1.38629 1.38629
|
|
12537 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12538 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
|
|
12539 1.38629 1.38629 1.38629 1.38629
|
|
12540 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12541 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
12542 1.38629 1.38629 1.38629 1.38629
|
|
12543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12544 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
|
|
12545 1.38629 1.38629 1.38629 1.38629
|
|
12546 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12547 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
|
|
12548 1.38629 1.38629 1.38629 1.38629
|
|
12549 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12550 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
12551 1.38629 1.38629 1.38629 1.38629
|
|
12552 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12553 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
12554 1.38629 1.38629 1.38629 1.38629
|
|
12555 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12556 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
|
|
12557 1.38629 1.38629 1.38629 1.38629
|
|
12558 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12559 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
12560 1.38629 1.38629 1.38629 1.38629
|
|
12561 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12562 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
|
|
12563 1.38629 1.38629 1.38629 1.38629
|
|
12564 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12565 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
|
|
12566 1.38629 1.38629 1.38629 1.38629
|
|
12567 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12568 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
|
|
12569 1.38629 1.38629 1.38629 1.38629
|
|
12570 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12571 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
12572 1.38629 1.38629 1.38629 1.38629
|
|
12573 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12574 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
12575 1.38629 1.38629 1.38629 1.38629
|
|
12576 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12577 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
|
|
12578 1.38629 1.38629 1.38629 1.38629
|
|
12579 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12580 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
|
|
12581 1.38629 1.38629 1.38629 1.38629
|
|
12582 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12583 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
12584 1.38629 1.38629 1.38629 1.38629
|
|
12585 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12586 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
|
|
12587 1.38629 1.38629 1.38629 1.38629
|
|
12588 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12589 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
|
|
12590 1.38629 1.38629 1.38629 1.38629
|
|
12591 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12592 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
|
|
12593 1.38629 1.38629 1.38629 1.38629
|
|
12594 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12595 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
12596 1.38629 1.38629 1.38629 1.38629
|
|
12597 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12598 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
|
|
12599 1.38629 1.38629 1.38629 1.38629
|
|
12600 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12601 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
|
|
12602 1.38629 1.38629 1.38629 1.38629
|
|
12603 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12604 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
|
|
12605 1.38629 1.38629 1.38629 1.38629
|
|
12606 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12607 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
|
|
12608 1.38629 1.38629 1.38629 1.38629
|
|
12609 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12610 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
12611 1.38629 1.38629 1.38629 1.38629
|
|
12612 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12613 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
|
|
12614 1.38629 1.38629 1.38629 1.38629
|
|
12615 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12616 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
|
|
12617 1.38629 1.38629 1.38629 1.38629
|
|
12618 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12619 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
|
|
12620 1.38629 1.38629 1.38629 1.38629
|
|
12621 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12622 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
12623 1.38629 1.38629 1.38629 1.38629
|
|
12624 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12625 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
12626 1.38629 1.38629 1.38629 1.38629
|
|
12627 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12628 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
|
|
12629 1.38629 1.38629 1.38629 1.38629
|
|
12630 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12631 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
|
|
12632 1.38629 1.38629 1.38629 1.38629
|
|
12633 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12634 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
|
|
12635 1.38629 1.38629 1.38629 1.38629
|
|
12636 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12637 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
12638 1.38629 1.38629 1.38629 1.38629
|
|
12639 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12640 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
|
|
12641 1.38629 1.38629 1.38629 1.38629
|
|
12642 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12643 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
|
|
12644 1.38629 1.38629 1.38629 1.38629
|
|
12645 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12646 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
|
|
12647 1.38629 1.38629 1.38629 1.38629
|
|
12648 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12649 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
12650 1.38629 1.38629 1.38629 1.38629
|
|
12651 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12652 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
|
|
12653 1.38629 1.38629 1.38629 1.38629
|
|
12654 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12655 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
12656 1.38629 1.38629 1.38629 1.38629
|
|
12657 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12658 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
|
|
12659 1.38629 1.38629 1.38629 1.38629
|
|
12660 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12661 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
12662 1.38629 1.38629 1.38629 1.38629
|
|
12663 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12664 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
|
|
12665 1.38629 1.38629 1.38629 1.38629
|
|
12666 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12667 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
|
|
12668 1.38629 1.38629 1.38629 1.38629
|
|
12669 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12670 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
12671 1.38629 1.38629 1.38629 1.38629
|
|
12672 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12673 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
|
|
12674 1.38629 1.38629 1.38629 1.38629
|
|
12675 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12676 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
|
|
12677 1.38629 1.38629 1.38629 1.38629
|
|
12678 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12679 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
|
|
12680 1.38629 1.38629 1.38629 1.38629
|
|
12681 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12682 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
|
|
12683 1.38629 1.38629 1.38629 1.38629
|
|
12684 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
12685 //
|
|
12686 HMMER3/f [3.2.1 | June 2018]
|
|
12687 NAME long.53.aln
|
|
12688 LENG 70
|
|
12689 MAXL 160
|
|
12690 ALPH DNA
|
|
12691 RF no
|
|
12692 MM no
|
|
12693 CONS yes
|
|
12694 CS no
|
|
12695 MAP yes
|
|
12696 DATE Tue May 28 13:12:04 2019
|
|
12697 NSEQ 2
|
|
12698 EFFN 2.000000
|
|
12699 CKSUM 4138962244
|
|
12700 STATS LOCAL MSV -7.9188 0.72028
|
|
12701 STATS LOCAL VITERBI -9.2113 0.72028
|
|
12702 STATS LOCAL FORWARD -3.4388 0.72028
|
|
12703 HMM A C G T
|
|
12704 m->m m->i m->d i->m i->i d->m d->d
|
|
12705 COMPO 1.16628 1.58889 1.37387 1.46448
|
|
12706 1.38629 1.38629 1.38629 1.38629
|
|
12707 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
12708 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
|
|
12709 1.38629 1.38629 1.38629 1.38629
|
|
12710 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12711 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
|
|
12712 1.38629 1.38629 1.38629 1.38629
|
|
12713 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12714 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
|
|
12715 1.38629 1.38629 1.38629 1.38629
|
|
12716 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12717 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
|
|
12718 1.38629 1.38629 1.38629 1.38629
|
|
12719 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12720 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
|
|
12721 1.38629 1.38629 1.38629 1.38629
|
|
12722 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12723 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
|
|
12724 1.38629 1.38629 1.38629 1.38629
|
|
12725 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12726 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
|
|
12727 1.38629 1.38629 1.38629 1.38629
|
|
12728 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12729 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
12730 1.38629 1.38629 1.38629 1.38629
|
|
12731 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12732 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
|
|
12733 1.38629 1.38629 1.38629 1.38629
|
|
12734 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12735 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
|
|
12736 1.38629 1.38629 1.38629 1.38629
|
|
12737 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12738 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
|
|
12739 1.38629 1.38629 1.38629 1.38629
|
|
12740 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12741 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
12742 1.38629 1.38629 1.38629 1.38629
|
|
12743 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12744 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
|
|
12745 1.38629 1.38629 1.38629 1.38629
|
|
12746 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12747 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
|
|
12748 1.38629 1.38629 1.38629 1.38629
|
|
12749 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12750 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
|
|
12751 1.38629 1.38629 1.38629 1.38629
|
|
12752 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12753 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
|
|
12754 1.38629 1.38629 1.38629 1.38629
|
|
12755 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12756 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
12757 1.38629 1.38629 1.38629 1.38629
|
|
12758 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12759 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
12760 1.38629 1.38629 1.38629 1.38629
|
|
12761 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12762 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
12763 1.38629 1.38629 1.38629 1.38629
|
|
12764 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12765 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
|
|
12766 1.38629 1.38629 1.38629 1.38629
|
|
12767 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12768 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
|
|
12769 1.38629 1.38629 1.38629 1.38629
|
|
12770 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12771 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
|
|
12772 1.38629 1.38629 1.38629 1.38629
|
|
12773 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12774 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
12775 1.38629 1.38629 1.38629 1.38629
|
|
12776 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12777 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
12778 1.38629 1.38629 1.38629 1.38629
|
|
12779 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12780 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
|
|
12781 1.38629 1.38629 1.38629 1.38629
|
|
12782 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12783 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
12784 1.38629 1.38629 1.38629 1.38629
|
|
12785 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12786 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
|
|
12787 1.38629 1.38629 1.38629 1.38629
|
|
12788 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12789 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
|
|
12790 1.38629 1.38629 1.38629 1.38629
|
|
12791 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12792 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
|
|
12793 1.38629 1.38629 1.38629 1.38629
|
|
12794 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12795 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
|
|
12796 1.38629 1.38629 1.38629 1.38629
|
|
12797 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12798 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
12799 1.38629 1.38629 1.38629 1.38629
|
|
12800 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12801 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
12802 1.38629 1.38629 1.38629 1.38629
|
|
12803 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12804 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
|
|
12805 1.38629 1.38629 1.38629 1.38629
|
|
12806 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12807 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
12808 1.38629 1.38629 1.38629 1.38629
|
|
12809 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12810 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
|
|
12811 1.38629 1.38629 1.38629 1.38629
|
|
12812 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12813 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
|
|
12814 1.38629 1.38629 1.38629 1.38629
|
|
12815 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12816 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
12817 1.38629 1.38629 1.38629 1.38629
|
|
12818 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12819 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
|
|
12820 1.38629 1.38629 1.38629 1.38629
|
|
12821 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12822 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
|
|
12823 1.38629 1.38629 1.38629 1.38629
|
|
12824 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12825 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
|
|
12826 1.38629 1.38629 1.38629 1.38629
|
|
12827 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12828 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
|
|
12829 1.38629 1.38629 1.38629 1.38629
|
|
12830 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12831 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
|
|
12832 1.38629 1.38629 1.38629 1.38629
|
|
12833 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12834 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
|
|
12835 1.38629 1.38629 1.38629 1.38629
|
|
12836 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12837 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
12838 1.38629 1.38629 1.38629 1.38629
|
|
12839 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12840 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
|
|
12841 1.38629 1.38629 1.38629 1.38629
|
|
12842 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12843 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
12844 1.38629 1.38629 1.38629 1.38629
|
|
12845 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12846 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
12847 1.38629 1.38629 1.38629 1.38629
|
|
12848 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12849 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
|
|
12850 1.38629 1.38629 1.38629 1.38629
|
|
12851 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12852 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
|
|
12853 1.38629 1.38629 1.38629 1.38629
|
|
12854 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12855 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
|
|
12856 1.38629 1.38629 1.38629 1.38629
|
|
12857 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12858 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
|
|
12859 1.38629 1.38629 1.38629 1.38629
|
|
12860 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12861 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
|
|
12862 1.38629 1.38629 1.38629 1.38629
|
|
12863 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12864 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
12865 1.38629 1.38629 1.38629 1.38629
|
|
12866 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12867 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
12868 1.38629 1.38629 1.38629 1.38629
|
|
12869 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12870 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
12871 1.38629 1.38629 1.38629 1.38629
|
|
12872 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12873 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
12874 1.38629 1.38629 1.38629 1.38629
|
|
12875 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12876 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
|
|
12877 1.38629 1.38629 1.38629 1.38629
|
|
12878 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12879 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
12880 1.38629 1.38629 1.38629 1.38629
|
|
12881 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12882 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
12883 1.38629 1.38629 1.38629 1.38629
|
|
12884 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12885 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
12886 1.38629 1.38629 1.38629 1.38629
|
|
12887 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12888 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
12889 1.38629 1.38629 1.38629 1.38629
|
|
12890 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12891 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
12892 1.38629 1.38629 1.38629 1.38629
|
|
12893 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12894 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
|
|
12895 1.38629 1.38629 1.38629 1.38629
|
|
12896 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12897 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
12898 1.38629 1.38629 1.38629 1.38629
|
|
12899 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12900 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
12901 1.38629 1.38629 1.38629 1.38629
|
|
12902 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12903 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
|
|
12904 1.38629 1.38629 1.38629 1.38629
|
|
12905 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12906 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
|
|
12907 1.38629 1.38629 1.38629 1.38629
|
|
12908 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12909 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
|
|
12910 1.38629 1.38629 1.38629 1.38629
|
|
12911 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12912 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
|
|
12913 1.38629 1.38629 1.38629 1.38629
|
|
12914 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12915 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
|
|
12916 1.38629 1.38629 1.38629 1.38629
|
|
12917 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
12918 //
|
|
12919 HMMER3/f [3.2.1 | June 2018]
|
|
12920 NAME long.54.aln
|
|
12921 LENG 70
|
|
12922 MAXL 160
|
|
12923 ALPH DNA
|
|
12924 RF no
|
|
12925 MM no
|
|
12926 CONS yes
|
|
12927 CS no
|
|
12928 MAP yes
|
|
12929 DATE Tue May 28 13:12:04 2019
|
|
12930 NSEQ 2
|
|
12931 EFFN 2.000000
|
|
12932 CKSUM 677277550
|
|
12933 STATS LOCAL MSV -7.8511 0.72028
|
|
12934 STATS LOCAL VITERBI -9.3045 0.72028
|
|
12935 STATS LOCAL FORWARD -3.4387 0.72028
|
|
12936 HMM A C G T
|
|
12937 m->m m->i m->d i->m i->i d->m d->d
|
|
12938 COMPO 0.99121 1.67344 1.52419 1.49846
|
|
12939 1.38629 1.38629 1.38629 1.38629
|
|
12940 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
12941 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
|
|
12942 1.38629 1.38629 1.38629 1.38629
|
|
12943 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12944 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
|
|
12945 1.38629 1.38629 1.38629 1.38629
|
|
12946 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12947 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
|
|
12948 1.38629 1.38629 1.38629 1.38629
|
|
12949 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12950 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
|
|
12951 1.38629 1.38629 1.38629 1.38629
|
|
12952 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12953 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
|
|
12954 1.38629 1.38629 1.38629 1.38629
|
|
12955 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12956 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
|
|
12957 1.38629 1.38629 1.38629 1.38629
|
|
12958 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12959 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
12960 1.38629 1.38629 1.38629 1.38629
|
|
12961 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12962 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
|
|
12963 1.38629 1.38629 1.38629 1.38629
|
|
12964 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12965 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
12966 1.38629 1.38629 1.38629 1.38629
|
|
12967 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12968 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
12969 1.38629 1.38629 1.38629 1.38629
|
|
12970 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12971 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
|
|
12972 1.38629 1.38629 1.38629 1.38629
|
|
12973 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12974 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
12975 1.38629 1.38629 1.38629 1.38629
|
|
12976 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12977 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
|
|
12978 1.38629 1.38629 1.38629 1.38629
|
|
12979 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12980 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
|
|
12981 1.38629 1.38629 1.38629 1.38629
|
|
12982 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12983 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
|
|
12984 1.38629 1.38629 1.38629 1.38629
|
|
12985 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12986 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
12987 1.38629 1.38629 1.38629 1.38629
|
|
12988 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12989 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
12990 1.38629 1.38629 1.38629 1.38629
|
|
12991 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12992 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
12993 1.38629 1.38629 1.38629 1.38629
|
|
12994 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12995 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
12996 1.38629 1.38629 1.38629 1.38629
|
|
12997 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
12998 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
|
|
12999 1.38629 1.38629 1.38629 1.38629
|
|
13000 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13001 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
13002 1.38629 1.38629 1.38629 1.38629
|
|
13003 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13004 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
13005 1.38629 1.38629 1.38629 1.38629
|
|
13006 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13007 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
13008 1.38629 1.38629 1.38629 1.38629
|
|
13009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13010 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
13011 1.38629 1.38629 1.38629 1.38629
|
|
13012 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13013 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
|
|
13014 1.38629 1.38629 1.38629 1.38629
|
|
13015 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13016 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
|
|
13017 1.38629 1.38629 1.38629 1.38629
|
|
13018 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13019 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
13020 1.38629 1.38629 1.38629 1.38629
|
|
13021 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13022 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
|
|
13023 1.38629 1.38629 1.38629 1.38629
|
|
13024 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13025 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
|
|
13026 1.38629 1.38629 1.38629 1.38629
|
|
13027 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13028 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
|
|
13029 1.38629 1.38629 1.38629 1.38629
|
|
13030 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13031 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
|
|
13032 1.38629 1.38629 1.38629 1.38629
|
|
13033 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13034 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
13035 1.38629 1.38629 1.38629 1.38629
|
|
13036 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13037 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
|
|
13038 1.38629 1.38629 1.38629 1.38629
|
|
13039 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13040 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
13041 1.38629 1.38629 1.38629 1.38629
|
|
13042 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13043 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
|
|
13044 1.38629 1.38629 1.38629 1.38629
|
|
13045 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13046 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
|
|
13047 1.38629 1.38629 1.38629 1.38629
|
|
13048 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13049 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
|
|
13050 1.38629 1.38629 1.38629 1.38629
|
|
13051 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13052 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
|
|
13053 1.38629 1.38629 1.38629 1.38629
|
|
13054 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13055 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
|
|
13056 1.38629 1.38629 1.38629 1.38629
|
|
13057 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13058 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
13059 1.38629 1.38629 1.38629 1.38629
|
|
13060 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13061 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
13062 1.38629 1.38629 1.38629 1.38629
|
|
13063 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13064 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
13065 1.38629 1.38629 1.38629 1.38629
|
|
13066 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13067 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
13068 1.38629 1.38629 1.38629 1.38629
|
|
13069 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13070 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
|
|
13071 1.38629 1.38629 1.38629 1.38629
|
|
13072 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13073 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
|
|
13074 1.38629 1.38629 1.38629 1.38629
|
|
13075 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13076 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
|
|
13077 1.38629 1.38629 1.38629 1.38629
|
|
13078 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13079 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
13080 1.38629 1.38629 1.38629 1.38629
|
|
13081 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13082 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
|
|
13083 1.38629 1.38629 1.38629 1.38629
|
|
13084 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13085 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
|
|
13086 1.38629 1.38629 1.38629 1.38629
|
|
13087 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13088 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
|
|
13089 1.38629 1.38629 1.38629 1.38629
|
|
13090 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13091 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
13092 1.38629 1.38629 1.38629 1.38629
|
|
13093 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13094 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
|
|
13095 1.38629 1.38629 1.38629 1.38629
|
|
13096 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13097 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
13098 1.38629 1.38629 1.38629 1.38629
|
|
13099 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13100 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
|
|
13101 1.38629 1.38629 1.38629 1.38629
|
|
13102 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13103 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
|
|
13104 1.38629 1.38629 1.38629 1.38629
|
|
13105 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13106 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
|
|
13107 1.38629 1.38629 1.38629 1.38629
|
|
13108 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13109 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
|
|
13110 1.38629 1.38629 1.38629 1.38629
|
|
13111 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13112 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
|
|
13113 1.38629 1.38629 1.38629 1.38629
|
|
13114 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13115 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
|
|
13116 1.38629 1.38629 1.38629 1.38629
|
|
13117 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13118 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
|
|
13119 1.38629 1.38629 1.38629 1.38629
|
|
13120 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13121 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
|
|
13122 1.38629 1.38629 1.38629 1.38629
|
|
13123 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13124 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
|
|
13125 1.38629 1.38629 1.38629 1.38629
|
|
13126 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13127 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
13128 1.38629 1.38629 1.38629 1.38629
|
|
13129 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13130 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
13131 1.38629 1.38629 1.38629 1.38629
|
|
13132 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13133 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
13134 1.38629 1.38629 1.38629 1.38629
|
|
13135 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13136 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
13137 1.38629 1.38629 1.38629 1.38629
|
|
13138 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13139 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
13140 1.38629 1.38629 1.38629 1.38629
|
|
13141 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13142 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
|
|
13143 1.38629 1.38629 1.38629 1.38629
|
|
13144 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13145 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
13146 1.38629 1.38629 1.38629 1.38629
|
|
13147 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13148 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
13149 1.38629 1.38629 1.38629 1.38629
|
|
13150 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
13151 //
|
|
13152 HMMER3/f [3.2.1 | June 2018]
|
|
13153 NAME long.55.aln
|
|
13154 LENG 70
|
|
13155 MAXL 160
|
|
13156 ALPH DNA
|
|
13157 RF no
|
|
13158 MM no
|
|
13159 CONS yes
|
|
13160 CS no
|
|
13161 MAP yes
|
|
13162 DATE Tue May 28 13:12:04 2019
|
|
13163 NSEQ 2
|
|
13164 EFFN 2.000000
|
|
13165 CKSUM 270279876
|
|
13166 STATS LOCAL MSV -8.2600 0.72111
|
|
13167 STATS LOCAL VITERBI -9.2516 0.72111
|
|
13168 STATS LOCAL FORWARD -3.7652 0.72111
|
|
13169 HMM A C G T
|
|
13170 m->m m->i m->d i->m i->i d->m d->d
|
|
13171 COMPO 1.44455 1.60151 1.37316 1.17360
|
|
13172 1.38629 1.38629 1.38629 1.38629
|
|
13173 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
13174 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
13175 1.38629 1.38629 1.38629 1.38629
|
|
13176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13177 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
|
|
13178 1.38629 1.38629 1.38629 1.38629
|
|
13179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13180 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
|
|
13181 1.38629 1.38629 1.38629 1.38629
|
|
13182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13183 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
|
|
13184 1.38629 1.38629 1.38629 1.38629
|
|
13185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13186 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
13187 1.38629 1.38629 1.38629 1.38629
|
|
13188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13189 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
|
|
13190 1.38629 1.38629 1.38629 1.38629
|
|
13191 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13192 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
13193 1.38629 1.38629 1.38629 1.38629
|
|
13194 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13195 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
13196 1.38629 1.38629 1.38629 1.38629
|
|
13197 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13198 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
|
|
13199 1.38629 1.38629 1.38629 1.38629
|
|
13200 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13201 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
|
|
13202 1.38629 1.38629 1.38629 1.38629
|
|
13203 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13204 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
|
|
13205 1.38629 1.38629 1.38629 1.38629
|
|
13206 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13207 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
|
|
13208 1.38629 1.38629 1.38629 1.38629
|
|
13209 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13210 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
|
|
13211 1.38629 1.38629 1.38629 1.38629
|
|
13212 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13213 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
13214 1.38629 1.38629 1.38629 1.38629
|
|
13215 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13216 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
|
|
13217 1.38629 1.38629 1.38629 1.38629
|
|
13218 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13219 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
13220 1.38629 1.38629 1.38629 1.38629
|
|
13221 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13222 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
|
|
13223 1.38629 1.38629 1.38629 1.38629
|
|
13224 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13225 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
13226 1.38629 1.38629 1.38629 1.38629
|
|
13227 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13228 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
13229 1.38629 1.38629 1.38629 1.38629
|
|
13230 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13231 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
13232 1.38629 1.38629 1.38629 1.38629
|
|
13233 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13234 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
|
|
13235 1.38629 1.38629 1.38629 1.38629
|
|
13236 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13237 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
13238 1.38629 1.38629 1.38629 1.38629
|
|
13239 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13240 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
|
|
13241 1.38629 1.38629 1.38629 1.38629
|
|
13242 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13243 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
|
|
13244 1.38629 1.38629 1.38629 1.38629
|
|
13245 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13246 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
|
|
13247 1.38629 1.38629 1.38629 1.38629
|
|
13248 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13249 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
|
|
13250 1.38629 1.38629 1.38629 1.38629
|
|
13251 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13252 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
13253 1.38629 1.38629 1.38629 1.38629
|
|
13254 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13255 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
|
|
13256 1.38629 1.38629 1.38629 1.38629
|
|
13257 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13258 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
13259 1.38629 1.38629 1.38629 1.38629
|
|
13260 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13261 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
|
|
13262 1.38629 1.38629 1.38629 1.38629
|
|
13263 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13264 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
|
|
13265 1.38629 1.38629 1.38629 1.38629
|
|
13266 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13267 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
|
|
13268 1.38629 1.38629 1.38629 1.38629
|
|
13269 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13270 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
13271 1.38629 1.38629 1.38629 1.38629
|
|
13272 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13273 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
13274 1.38629 1.38629 1.38629 1.38629
|
|
13275 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13276 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
|
|
13277 1.38629 1.38629 1.38629 1.38629
|
|
13278 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13279 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
13280 1.38629 1.38629 1.38629 1.38629
|
|
13281 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13282 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
13283 1.38629 1.38629 1.38629 1.38629
|
|
13284 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13285 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
|
|
13286 1.38629 1.38629 1.38629 1.38629
|
|
13287 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13288 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
13289 1.38629 1.38629 1.38629 1.38629
|
|
13290 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13291 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
|
|
13292 1.38629 1.38629 1.38629 1.38629
|
|
13293 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13294 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
|
|
13295 1.38629 1.38629 1.38629 1.38629
|
|
13296 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13297 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
|
|
13298 1.38629 1.38629 1.38629 1.38629
|
|
13299 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13300 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
13301 1.38629 1.38629 1.38629 1.38629
|
|
13302 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13303 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
13304 1.38629 1.38629 1.38629 1.38629
|
|
13305 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13306 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
|
|
13307 1.38629 1.38629 1.38629 1.38629
|
|
13308 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13309 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
|
|
13310 1.38629 1.38629 1.38629 1.38629
|
|
13311 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13312 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
|
|
13313 1.38629 1.38629 1.38629 1.38629
|
|
13314 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13315 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
|
|
13316 1.38629 1.38629 1.38629 1.38629
|
|
13317 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13318 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
|
|
13319 1.38629 1.38629 1.38629 1.38629
|
|
13320 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13321 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
|
|
13322 1.38629 1.38629 1.38629 1.38629
|
|
13323 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13324 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
13325 1.38629 1.38629 1.38629 1.38629
|
|
13326 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13327 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
|
|
13328 1.38629 1.38629 1.38629 1.38629
|
|
13329 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13330 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
|
|
13331 1.38629 1.38629 1.38629 1.38629
|
|
13332 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13333 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
|
|
13334 1.38629 1.38629 1.38629 1.38629
|
|
13335 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13336 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
|
|
13337 1.38629 1.38629 1.38629 1.38629
|
|
13338 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13339 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
|
|
13340 1.38629 1.38629 1.38629 1.38629
|
|
13341 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13342 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
|
|
13343 1.38629 1.38629 1.38629 1.38629
|
|
13344 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13345 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
13346 1.38629 1.38629 1.38629 1.38629
|
|
13347 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13348 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
|
|
13349 1.38629 1.38629 1.38629 1.38629
|
|
13350 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13351 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
13352 1.38629 1.38629 1.38629 1.38629
|
|
13353 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13354 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
|
|
13355 1.38629 1.38629 1.38629 1.38629
|
|
13356 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13357 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
13358 1.38629 1.38629 1.38629 1.38629
|
|
13359 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13360 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
|
|
13361 1.38629 1.38629 1.38629 1.38629
|
|
13362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13363 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
|
|
13364 1.38629 1.38629 1.38629 1.38629
|
|
13365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13366 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
|
|
13367 1.38629 1.38629 1.38629 1.38629
|
|
13368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13369 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
|
|
13370 1.38629 1.38629 1.38629 1.38629
|
|
13371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13372 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
13373 1.38629 1.38629 1.38629 1.38629
|
|
13374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13375 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
|
|
13376 1.38629 1.38629 1.38629 1.38629
|
|
13377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13378 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
|
|
13379 1.38629 1.38629 1.38629 1.38629
|
|
13380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13381 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
|
|
13382 1.38629 1.38629 1.38629 1.38629
|
|
13383 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
13384 //
|
|
13385 HMMER3/f [3.2.1 | June 2018]
|
|
13386 NAME long.56.aln
|
|
13387 LENG 70
|
|
13388 MAXL 160
|
|
13389 ALPH DNA
|
|
13390 RF no
|
|
13391 MM no
|
|
13392 CONS yes
|
|
13393 CS no
|
|
13394 MAP yes
|
|
13395 DATE Tue May 28 13:12:03 2019
|
|
13396 NSEQ 2
|
|
13397 EFFN 2.000000
|
|
13398 CKSUM 3045280856
|
|
13399 STATS LOCAL MSV -8.0658 0.72163
|
|
13400 STATS LOCAL VITERBI -9.3021 0.72163
|
|
13401 STATS LOCAL FORWARD -3.6953 0.72163
|
|
13402 HMM A C G T
|
|
13403 m->m m->i m->d i->m i->i d->m d->d
|
|
13404 COMPO 1.41320 1.34805 1.61527 1.21049
|
|
13405 1.38629 1.38629 1.38629 1.38629
|
|
13406 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
13407 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
13408 1.38629 1.38629 1.38629 1.38629
|
|
13409 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13410 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
|
|
13411 1.38629 1.38629 1.38629 1.38629
|
|
13412 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13413 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
|
|
13414 1.38629 1.38629 1.38629 1.38629
|
|
13415 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13416 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
|
|
13417 1.38629 1.38629 1.38629 1.38629
|
|
13418 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13419 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
13420 1.38629 1.38629 1.38629 1.38629
|
|
13421 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13422 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
|
|
13423 1.38629 1.38629 1.38629 1.38629
|
|
13424 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13425 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
|
|
13426 1.38629 1.38629 1.38629 1.38629
|
|
13427 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13428 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
|
|
13429 1.38629 1.38629 1.38629 1.38629
|
|
13430 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13431 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
|
|
13432 1.38629 1.38629 1.38629 1.38629
|
|
13433 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13434 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
|
|
13435 1.38629 1.38629 1.38629 1.38629
|
|
13436 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13437 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
|
|
13438 1.38629 1.38629 1.38629 1.38629
|
|
13439 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13440 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
|
|
13441 1.38629 1.38629 1.38629 1.38629
|
|
13442 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13443 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
|
|
13444 1.38629 1.38629 1.38629 1.38629
|
|
13445 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13446 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
13447 1.38629 1.38629 1.38629 1.38629
|
|
13448 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13449 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
|
|
13450 1.38629 1.38629 1.38629 1.38629
|
|
13451 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13452 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
13453 1.38629 1.38629 1.38629 1.38629
|
|
13454 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13455 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
13456 1.38629 1.38629 1.38629 1.38629
|
|
13457 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13458 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
13459 1.38629 1.38629 1.38629 1.38629
|
|
13460 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13461 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
|
|
13462 1.38629 1.38629 1.38629 1.38629
|
|
13463 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13464 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
13465 1.38629 1.38629 1.38629 1.38629
|
|
13466 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13467 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
|
|
13468 1.38629 1.38629 1.38629 1.38629
|
|
13469 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13470 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
|
|
13471 1.38629 1.38629 1.38629 1.38629
|
|
13472 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13473 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
13474 1.38629 1.38629 1.38629 1.38629
|
|
13475 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13476 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
13477 1.38629 1.38629 1.38629 1.38629
|
|
13478 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13479 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
|
|
13480 1.38629 1.38629 1.38629 1.38629
|
|
13481 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13482 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
|
|
13483 1.38629 1.38629 1.38629 1.38629
|
|
13484 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13485 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
13486 1.38629 1.38629 1.38629 1.38629
|
|
13487 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13488 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
|
|
13489 1.38629 1.38629 1.38629 1.38629
|
|
13490 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13491 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
|
|
13492 1.38629 1.38629 1.38629 1.38629
|
|
13493 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13494 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
|
|
13495 1.38629 1.38629 1.38629 1.38629
|
|
13496 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13497 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
13498 1.38629 1.38629 1.38629 1.38629
|
|
13499 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13500 32 2.38910 2.82844 0.25233 2.62837 32 g - - -
|
|
13501 1.38629 1.38629 1.38629 1.38629
|
|
13502 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13503 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
|
|
13504 1.38629 1.38629 1.38629 1.38629
|
|
13505 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13506 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
|
|
13507 1.38629 1.38629 1.38629 1.38629
|
|
13508 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13509 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
|
|
13510 1.38629 1.38629 1.38629 1.38629
|
|
13511 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13512 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
|
|
13513 1.38629 1.38629 1.38629 1.38629
|
|
13514 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13515 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
|
|
13516 1.38629 1.38629 1.38629 1.38629
|
|
13517 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13518 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
13519 1.38629 1.38629 1.38629 1.38629
|
|
13520 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13521 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
|
|
13522 1.38629 1.38629 1.38629 1.38629
|
|
13523 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13524 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
|
|
13525 1.38629 1.38629 1.38629 1.38629
|
|
13526 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13527 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
|
|
13528 1.38629 1.38629 1.38629 1.38629
|
|
13529 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13530 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
|
|
13531 1.38629 1.38629 1.38629 1.38629
|
|
13532 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13533 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
|
|
13534 1.38629 1.38629 1.38629 1.38629
|
|
13535 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13536 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
13537 1.38629 1.38629 1.38629 1.38629
|
|
13538 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13539 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
13540 1.38629 1.38629 1.38629 1.38629
|
|
13541 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13542 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
|
|
13543 1.38629 1.38629 1.38629 1.38629
|
|
13544 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13545 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
13546 1.38629 1.38629 1.38629 1.38629
|
|
13547 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13548 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
|
|
13549 1.38629 1.38629 1.38629 1.38629
|
|
13550 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13551 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
|
|
13552 1.38629 1.38629 1.38629 1.38629
|
|
13553 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13554 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
|
|
13555 1.38629 1.38629 1.38629 1.38629
|
|
13556 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13557 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
13558 1.38629 1.38629 1.38629 1.38629
|
|
13559 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13560 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
|
|
13561 1.38629 1.38629 1.38629 1.38629
|
|
13562 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13563 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
|
|
13564 1.38629 1.38629 1.38629 1.38629
|
|
13565 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13566 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
|
|
13567 1.38629 1.38629 1.38629 1.38629
|
|
13568 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13569 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
|
|
13570 1.38629 1.38629 1.38629 1.38629
|
|
13571 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13572 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
|
|
13573 1.38629 1.38629 1.38629 1.38629
|
|
13574 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13575 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
|
|
13576 1.38629 1.38629 1.38629 1.38629
|
|
13577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13578 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
13579 1.38629 1.38629 1.38629 1.38629
|
|
13580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13581 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
|
|
13582 1.38629 1.38629 1.38629 1.38629
|
|
13583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13584 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
|
|
13585 1.38629 1.38629 1.38629 1.38629
|
|
13586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13587 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
13588 1.38629 1.38629 1.38629 1.38629
|
|
13589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13590 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
|
|
13591 1.38629 1.38629 1.38629 1.38629
|
|
13592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13593 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
|
|
13594 1.38629 1.38629 1.38629 1.38629
|
|
13595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13596 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
13597 1.38629 1.38629 1.38629 1.38629
|
|
13598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13599 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
|
|
13600 1.38629 1.38629 1.38629 1.38629
|
|
13601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13602 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
|
|
13603 1.38629 1.38629 1.38629 1.38629
|
|
13604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13605 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
|
|
13606 1.38629 1.38629 1.38629 1.38629
|
|
13607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13608 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
|
|
13609 1.38629 1.38629 1.38629 1.38629
|
|
13610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13611 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
13612 1.38629 1.38629 1.38629 1.38629
|
|
13613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13614 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
|
|
13615 1.38629 1.38629 1.38629 1.38629
|
|
13616 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
13617 //
|
|
13618 HMMER3/f [3.2.1 | June 2018]
|
|
13619 NAME long.57.aln
|
|
13620 LENG 70
|
|
13621 MAXL 160
|
|
13622 ALPH DNA
|
|
13623 RF no
|
|
13624 MM no
|
|
13625 CONS yes
|
|
13626 CS no
|
|
13627 MAP yes
|
|
13628 DATE Tue May 28 13:12:04 2019
|
|
13629 NSEQ 2
|
|
13630 EFFN 2.000000
|
|
13631 CKSUM 2156877472
|
|
13632 STATS LOCAL MSV -8.0137 0.72176
|
|
13633 STATS LOCAL VITERBI -9.3146 0.72176
|
|
13634 STATS LOCAL FORWARD -3.2022 0.72176
|
|
13635 HMM A C G T
|
|
13636 m->m m->i m->d i->m i->i d->m d->d
|
|
13637 COMPO 1.37567 1.54761 1.60818 1.09564
|
|
13638 1.38629 1.38629 1.38629 1.38629
|
|
13639 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
13640 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
13641 1.38629 1.38629 1.38629 1.38629
|
|
13642 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13643 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
|
|
13644 1.38629 1.38629 1.38629 1.38629
|
|
13645 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13646 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
|
|
13647 1.38629 1.38629 1.38629 1.38629
|
|
13648 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13649 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
|
|
13650 1.38629 1.38629 1.38629 1.38629
|
|
13651 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13652 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
|
|
13653 1.38629 1.38629 1.38629 1.38629
|
|
13654 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13655 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
13656 1.38629 1.38629 1.38629 1.38629
|
|
13657 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13658 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
|
|
13659 1.38629 1.38629 1.38629 1.38629
|
|
13660 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13661 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
|
|
13662 1.38629 1.38629 1.38629 1.38629
|
|
13663 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13664 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
|
|
13665 1.38629 1.38629 1.38629 1.38629
|
|
13666 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13667 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
|
|
13668 1.38629 1.38629 1.38629 1.38629
|
|
13669 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13670 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
13671 1.38629 1.38629 1.38629 1.38629
|
|
13672 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13673 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
|
|
13674 1.38629 1.38629 1.38629 1.38629
|
|
13675 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13676 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
13677 1.38629 1.38629 1.38629 1.38629
|
|
13678 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13679 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
|
|
13680 1.38629 1.38629 1.38629 1.38629
|
|
13681 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13682 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
|
|
13683 1.38629 1.38629 1.38629 1.38629
|
|
13684 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13685 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
|
|
13686 1.38629 1.38629 1.38629 1.38629
|
|
13687 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13688 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
13689 1.38629 1.38629 1.38629 1.38629
|
|
13690 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13691 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
13692 1.38629 1.38629 1.38629 1.38629
|
|
13693 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13694 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
13695 1.38629 1.38629 1.38629 1.38629
|
|
13696 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13697 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
|
|
13698 1.38629 1.38629 1.38629 1.38629
|
|
13699 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13700 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
|
|
13701 1.38629 1.38629 1.38629 1.38629
|
|
13702 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13703 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
|
|
13704 1.38629 1.38629 1.38629 1.38629
|
|
13705 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13706 23 2.38910 2.82844 0.25233 2.62837 23 g - - -
|
|
13707 1.38629 1.38629 1.38629 1.38629
|
|
13708 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13709 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
|
|
13710 1.38629 1.38629 1.38629 1.38629
|
|
13711 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13712 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
|
|
13713 1.38629 1.38629 1.38629 1.38629
|
|
13714 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13715 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
|
|
13716 1.38629 1.38629 1.38629 1.38629
|
|
13717 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13718 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
13719 1.38629 1.38629 1.38629 1.38629
|
|
13720 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13721 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
|
|
13722 1.38629 1.38629 1.38629 1.38629
|
|
13723 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13724 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
|
|
13725 1.38629 1.38629 1.38629 1.38629
|
|
13726 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13727 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
|
|
13728 1.38629 1.38629 1.38629 1.38629
|
|
13729 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13730 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
|
|
13731 1.38629 1.38629 1.38629 1.38629
|
|
13732 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13733 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
13734 1.38629 1.38629 1.38629 1.38629
|
|
13735 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13736 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
13737 1.38629 1.38629 1.38629 1.38629
|
|
13738 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13739 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
13740 1.38629 1.38629 1.38629 1.38629
|
|
13741 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13742 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
13743 1.38629 1.38629 1.38629 1.38629
|
|
13744 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13745 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
|
|
13746 1.38629 1.38629 1.38629 1.38629
|
|
13747 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13748 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
|
|
13749 1.38629 1.38629 1.38629 1.38629
|
|
13750 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13751 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
|
|
13752 1.38629 1.38629 1.38629 1.38629
|
|
13753 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13754 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
13755 1.38629 1.38629 1.38629 1.38629
|
|
13756 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13757 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
|
|
13758 1.38629 1.38629 1.38629 1.38629
|
|
13759 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13760 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
|
|
13761 1.38629 1.38629 1.38629 1.38629
|
|
13762 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13763 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
13764 1.38629 1.38629 1.38629 1.38629
|
|
13765 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13766 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
13767 1.38629 1.38629 1.38629 1.38629
|
|
13768 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13769 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
13770 1.38629 1.38629 1.38629 1.38629
|
|
13771 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13772 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
|
|
13773 1.38629 1.38629 1.38629 1.38629
|
|
13774 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13775 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
|
|
13776 1.38629 1.38629 1.38629 1.38629
|
|
13777 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13778 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
13779 1.38629 1.38629 1.38629 1.38629
|
|
13780 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13781 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
|
|
13782 1.38629 1.38629 1.38629 1.38629
|
|
13783 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13784 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
|
|
13785 1.38629 1.38629 1.38629 1.38629
|
|
13786 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13787 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
|
|
13788 1.38629 1.38629 1.38629 1.38629
|
|
13789 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13790 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
13791 1.38629 1.38629 1.38629 1.38629
|
|
13792 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13793 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
|
|
13794 1.38629 1.38629 1.38629 1.38629
|
|
13795 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13796 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
|
|
13797 1.38629 1.38629 1.38629 1.38629
|
|
13798 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13799 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
|
|
13800 1.38629 1.38629 1.38629 1.38629
|
|
13801 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13802 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
13803 1.38629 1.38629 1.38629 1.38629
|
|
13804 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13805 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
13806 1.38629 1.38629 1.38629 1.38629
|
|
13807 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13808 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
|
|
13809 1.38629 1.38629 1.38629 1.38629
|
|
13810 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13811 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
|
|
13812 1.38629 1.38629 1.38629 1.38629
|
|
13813 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13814 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
13815 1.38629 1.38629 1.38629 1.38629
|
|
13816 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13817 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
|
|
13818 1.38629 1.38629 1.38629 1.38629
|
|
13819 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13820 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
13821 1.38629 1.38629 1.38629 1.38629
|
|
13822 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13823 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
13824 1.38629 1.38629 1.38629 1.38629
|
|
13825 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13826 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
|
|
13827 1.38629 1.38629 1.38629 1.38629
|
|
13828 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13829 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
13830 1.38629 1.38629 1.38629 1.38629
|
|
13831 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13832 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
|
|
13833 1.38629 1.38629 1.38629 1.38629
|
|
13834 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13835 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
13836 1.38629 1.38629 1.38629 1.38629
|
|
13837 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13838 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
13839 1.38629 1.38629 1.38629 1.38629
|
|
13840 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13841 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
|
|
13842 1.38629 1.38629 1.38629 1.38629
|
|
13843 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13844 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
|
|
13845 1.38629 1.38629 1.38629 1.38629
|
|
13846 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13847 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
13848 1.38629 1.38629 1.38629 1.38629
|
|
13849 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
13850 //
|
|
13851 HMMER3/f [3.2.1 | June 2018]
|
|
13852 NAME long.58.aln
|
|
13853 LENG 70
|
|
13854 MAXL 160
|
|
13855 ALPH DNA
|
|
13856 RF no
|
|
13857 MM no
|
|
13858 CONS yes
|
|
13859 CS no
|
|
13860 MAP yes
|
|
13861 DATE Tue May 28 13:12:03 2019
|
|
13862 NSEQ 2
|
|
13863 EFFN 2.000000
|
|
13864 CKSUM 988802922
|
|
13865 STATS LOCAL MSV -7.9559 0.72068
|
|
13866 STATS LOCAL VITERBI -9.2724 0.72068
|
|
13867 STATS LOCAL FORWARD -3.4915 0.72068
|
|
13868 HMM A C G T
|
|
13869 m->m m->i m->d i->m i->i d->m d->d
|
|
13870 COMPO 1.11505 1.47137 1.56700 1.45320
|
|
13871 1.38629 1.38629 1.38629 1.38629
|
|
13872 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
13873 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
|
|
13874 1.38629 1.38629 1.38629 1.38629
|
|
13875 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13876 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
|
|
13877 1.38629 1.38629 1.38629 1.38629
|
|
13878 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13879 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
|
|
13880 1.38629 1.38629 1.38629 1.38629
|
|
13881 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13882 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
|
|
13883 1.38629 1.38629 1.38629 1.38629
|
|
13884 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13885 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
|
|
13886 1.38629 1.38629 1.38629 1.38629
|
|
13887 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13888 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
13889 1.38629 1.38629 1.38629 1.38629
|
|
13890 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13891 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
13892 1.38629 1.38629 1.38629 1.38629
|
|
13893 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13894 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
13895 1.38629 1.38629 1.38629 1.38629
|
|
13896 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13897 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
|
|
13898 1.38629 1.38629 1.38629 1.38629
|
|
13899 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13900 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
13901 1.38629 1.38629 1.38629 1.38629
|
|
13902 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13903 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
13904 1.38629 1.38629 1.38629 1.38629
|
|
13905 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13906 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
13907 1.38629 1.38629 1.38629 1.38629
|
|
13908 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13909 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
|
|
13910 1.38629 1.38629 1.38629 1.38629
|
|
13911 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13912 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
|
|
13913 1.38629 1.38629 1.38629 1.38629
|
|
13914 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13915 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
|
|
13916 1.38629 1.38629 1.38629 1.38629
|
|
13917 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13918 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
13919 1.38629 1.38629 1.38629 1.38629
|
|
13920 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13921 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
13922 1.38629 1.38629 1.38629 1.38629
|
|
13923 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13924 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
|
|
13925 1.38629 1.38629 1.38629 1.38629
|
|
13926 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13927 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
|
|
13928 1.38629 1.38629 1.38629 1.38629
|
|
13929 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13930 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
|
|
13931 1.38629 1.38629 1.38629 1.38629
|
|
13932 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13933 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
|
|
13934 1.38629 1.38629 1.38629 1.38629
|
|
13935 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13936 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
13937 1.38629 1.38629 1.38629 1.38629
|
|
13938 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13939 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
13940 1.38629 1.38629 1.38629 1.38629
|
|
13941 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13942 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
|
|
13943 1.38629 1.38629 1.38629 1.38629
|
|
13944 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13945 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
|
|
13946 1.38629 1.38629 1.38629 1.38629
|
|
13947 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13948 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
|
|
13949 1.38629 1.38629 1.38629 1.38629
|
|
13950 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13951 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
13952 1.38629 1.38629 1.38629 1.38629
|
|
13953 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13954 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
|
|
13955 1.38629 1.38629 1.38629 1.38629
|
|
13956 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13957 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
13958 1.38629 1.38629 1.38629 1.38629
|
|
13959 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13960 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
|
|
13961 1.38629 1.38629 1.38629 1.38629
|
|
13962 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13963 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
|
|
13964 1.38629 1.38629 1.38629 1.38629
|
|
13965 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13966 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
13967 1.38629 1.38629 1.38629 1.38629
|
|
13968 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13969 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
|
|
13970 1.38629 1.38629 1.38629 1.38629
|
|
13971 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13972 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
13973 1.38629 1.38629 1.38629 1.38629
|
|
13974 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13975 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
13976 1.38629 1.38629 1.38629 1.38629
|
|
13977 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13978 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
|
|
13979 1.38629 1.38629 1.38629 1.38629
|
|
13980 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13981 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
|
|
13982 1.38629 1.38629 1.38629 1.38629
|
|
13983 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13984 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
|
|
13985 1.38629 1.38629 1.38629 1.38629
|
|
13986 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13987 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
|
|
13988 1.38629 1.38629 1.38629 1.38629
|
|
13989 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13990 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
|
|
13991 1.38629 1.38629 1.38629 1.38629
|
|
13992 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13993 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
|
|
13994 1.38629 1.38629 1.38629 1.38629
|
|
13995 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13996 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
13997 1.38629 1.38629 1.38629 1.38629
|
|
13998 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
13999 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
14000 1.38629 1.38629 1.38629 1.38629
|
|
14001 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14002 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
|
|
14003 1.38629 1.38629 1.38629 1.38629
|
|
14004 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14005 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
14006 1.38629 1.38629 1.38629 1.38629
|
|
14007 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14008 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
|
|
14009 1.38629 1.38629 1.38629 1.38629
|
|
14010 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14011 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
|
|
14012 1.38629 1.38629 1.38629 1.38629
|
|
14013 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14014 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
|
|
14015 1.38629 1.38629 1.38629 1.38629
|
|
14016 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14017 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
|
|
14018 1.38629 1.38629 1.38629 1.38629
|
|
14019 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14020 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
|
|
14021 1.38629 1.38629 1.38629 1.38629
|
|
14022 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14023 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
|
|
14024 1.38629 1.38629 1.38629 1.38629
|
|
14025 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14026 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
14027 1.38629 1.38629 1.38629 1.38629
|
|
14028 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14029 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
14030 1.38629 1.38629 1.38629 1.38629
|
|
14031 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14032 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
|
|
14033 1.38629 1.38629 1.38629 1.38629
|
|
14034 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14035 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
|
|
14036 1.38629 1.38629 1.38629 1.38629
|
|
14037 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14038 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
14039 1.38629 1.38629 1.38629 1.38629
|
|
14040 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14041 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
|
|
14042 1.38629 1.38629 1.38629 1.38629
|
|
14043 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14044 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
14045 1.38629 1.38629 1.38629 1.38629
|
|
14046 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14047 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
|
|
14048 1.38629 1.38629 1.38629 1.38629
|
|
14049 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14050 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
14051 1.38629 1.38629 1.38629 1.38629
|
|
14052 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14053 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
14054 1.38629 1.38629 1.38629 1.38629
|
|
14055 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14056 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
|
|
14057 1.38629 1.38629 1.38629 1.38629
|
|
14058 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14059 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
|
|
14060 1.38629 1.38629 1.38629 1.38629
|
|
14061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14062 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
14063 1.38629 1.38629 1.38629 1.38629
|
|
14064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14065 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
14066 1.38629 1.38629 1.38629 1.38629
|
|
14067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14068 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
14069 1.38629 1.38629 1.38629 1.38629
|
|
14070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14071 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
14072 1.38629 1.38629 1.38629 1.38629
|
|
14073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14074 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
|
|
14075 1.38629 1.38629 1.38629 1.38629
|
|
14076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14077 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
|
|
14078 1.38629 1.38629 1.38629 1.38629
|
|
14079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14080 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
|
|
14081 1.38629 1.38629 1.38629 1.38629
|
|
14082 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
14083 //
|
|
14084 HMMER3/f [3.2.1 | June 2018]
|
|
14085 NAME long.59.aln
|
|
14086 LENG 70
|
|
14087 MAXL 160
|
|
14088 ALPH DNA
|
|
14089 RF no
|
|
14090 MM no
|
|
14091 CONS yes
|
|
14092 CS no
|
|
14093 MAP yes
|
|
14094 DATE Tue May 28 13:12:04 2019
|
|
14095 NSEQ 2
|
|
14096 EFFN 2.000000
|
|
14097 CKSUM 3210243743
|
|
14098 STATS LOCAL MSV -7.8918 0.72110
|
|
14099 STATS LOCAL VITERBI -9.2572 0.72110
|
|
14100 STATS LOCAL FORWARD -3.8308 0.72110
|
|
14101 HMM A C G T
|
|
14102 m->m m->i m->d i->m i->i d->m d->d
|
|
14103 COMPO 1.31529 1.39113 1.52918 1.32389
|
|
14104 1.38629 1.38629 1.38629 1.38629
|
|
14105 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
14106 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
14107 1.38629 1.38629 1.38629 1.38629
|
|
14108 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14109 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
|
|
14110 1.38629 1.38629 1.38629 1.38629
|
|
14111 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14112 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
|
|
14113 1.38629 1.38629 1.38629 1.38629
|
|
14114 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14115 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
|
|
14116 1.38629 1.38629 1.38629 1.38629
|
|
14117 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14118 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
|
|
14119 1.38629 1.38629 1.38629 1.38629
|
|
14120 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14121 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
14122 1.38629 1.38629 1.38629 1.38629
|
|
14123 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14124 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
|
|
14125 1.38629 1.38629 1.38629 1.38629
|
|
14126 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14127 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
14128 1.38629 1.38629 1.38629 1.38629
|
|
14129 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14130 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
|
|
14131 1.38629 1.38629 1.38629 1.38629
|
|
14132 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14133 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
|
|
14134 1.38629 1.38629 1.38629 1.38629
|
|
14135 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14136 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
|
|
14137 1.38629 1.38629 1.38629 1.38629
|
|
14138 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14139 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
|
|
14140 1.38629 1.38629 1.38629 1.38629
|
|
14141 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14142 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
14143 1.38629 1.38629 1.38629 1.38629
|
|
14144 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14145 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
|
|
14146 1.38629 1.38629 1.38629 1.38629
|
|
14147 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14148 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
14149 1.38629 1.38629 1.38629 1.38629
|
|
14150 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14151 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
|
|
14152 1.38629 1.38629 1.38629 1.38629
|
|
14153 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14154 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
|
|
14155 1.38629 1.38629 1.38629 1.38629
|
|
14156 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14157 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
|
|
14158 1.38629 1.38629 1.38629 1.38629
|
|
14159 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14160 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
|
|
14161 1.38629 1.38629 1.38629 1.38629
|
|
14162 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14163 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
14164 1.38629 1.38629 1.38629 1.38629
|
|
14165 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14166 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
14167 1.38629 1.38629 1.38629 1.38629
|
|
14168 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14169 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
|
|
14170 1.38629 1.38629 1.38629 1.38629
|
|
14171 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14172 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
14173 1.38629 1.38629 1.38629 1.38629
|
|
14174 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14175 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
|
|
14176 1.38629 1.38629 1.38629 1.38629
|
|
14177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14178 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
|
|
14179 1.38629 1.38629 1.38629 1.38629
|
|
14180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14181 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
|
|
14182 1.38629 1.38629 1.38629 1.38629
|
|
14183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14184 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
|
|
14185 1.38629 1.38629 1.38629 1.38629
|
|
14186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14187 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
14188 1.38629 1.38629 1.38629 1.38629
|
|
14189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14190 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
|
|
14191 1.38629 1.38629 1.38629 1.38629
|
|
14192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14193 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
|
|
14194 1.38629 1.38629 1.38629 1.38629
|
|
14195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14196 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
|
|
14197 1.38629 1.38629 1.38629 1.38629
|
|
14198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14199 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
14200 1.38629 1.38629 1.38629 1.38629
|
|
14201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14202 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
|
|
14203 1.38629 1.38629 1.38629 1.38629
|
|
14204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14205 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
|
|
14206 1.38629 1.38629 1.38629 1.38629
|
|
14207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14208 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
|
|
14209 1.38629 1.38629 1.38629 1.38629
|
|
14210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14211 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
|
|
14212 1.38629 1.38629 1.38629 1.38629
|
|
14213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14214 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
|
|
14215 1.38629 1.38629 1.38629 1.38629
|
|
14216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14217 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
|
|
14218 1.38629 1.38629 1.38629 1.38629
|
|
14219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14220 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
|
|
14221 1.38629 1.38629 1.38629 1.38629
|
|
14222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14223 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
|
|
14224 1.38629 1.38629 1.38629 1.38629
|
|
14225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14226 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
|
|
14227 1.38629 1.38629 1.38629 1.38629
|
|
14228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14229 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
14230 1.38629 1.38629 1.38629 1.38629
|
|
14231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14232 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
14233 1.38629 1.38629 1.38629 1.38629
|
|
14234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14235 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
14236 1.38629 1.38629 1.38629 1.38629
|
|
14237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14238 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
|
|
14239 1.38629 1.38629 1.38629 1.38629
|
|
14240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14241 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
14242 1.38629 1.38629 1.38629 1.38629
|
|
14243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14244 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
|
|
14245 1.38629 1.38629 1.38629 1.38629
|
|
14246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14247 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
|
|
14248 1.38629 1.38629 1.38629 1.38629
|
|
14249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14250 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
|
|
14251 1.38629 1.38629 1.38629 1.38629
|
|
14252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14253 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
|
|
14254 1.38629 1.38629 1.38629 1.38629
|
|
14255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14256 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
|
|
14257 1.38629 1.38629 1.38629 1.38629
|
|
14258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14259 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
|
|
14260 1.38629 1.38629 1.38629 1.38629
|
|
14261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14262 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
|
|
14263 1.38629 1.38629 1.38629 1.38629
|
|
14264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14265 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
|
|
14266 1.38629 1.38629 1.38629 1.38629
|
|
14267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14268 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
14269 1.38629 1.38629 1.38629 1.38629
|
|
14270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14271 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
14272 1.38629 1.38629 1.38629 1.38629
|
|
14273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14274 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
|
|
14275 1.38629 1.38629 1.38629 1.38629
|
|
14276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14277 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
14278 1.38629 1.38629 1.38629 1.38629
|
|
14279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14280 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
14281 1.38629 1.38629 1.38629 1.38629
|
|
14282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14283 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
|
|
14284 1.38629 1.38629 1.38629 1.38629
|
|
14285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14286 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
14287 1.38629 1.38629 1.38629 1.38629
|
|
14288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14289 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
|
|
14290 1.38629 1.38629 1.38629 1.38629
|
|
14291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14292 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
|
|
14293 1.38629 1.38629 1.38629 1.38629
|
|
14294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14295 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
|
|
14296 1.38629 1.38629 1.38629 1.38629
|
|
14297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14298 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
|
|
14299 1.38629 1.38629 1.38629 1.38629
|
|
14300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14301 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
14302 1.38629 1.38629 1.38629 1.38629
|
|
14303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14304 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
14305 1.38629 1.38629 1.38629 1.38629
|
|
14306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14307 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
|
|
14308 1.38629 1.38629 1.38629 1.38629
|
|
14309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14310 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
|
|
14311 1.38629 1.38629 1.38629 1.38629
|
|
14312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14313 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
14314 1.38629 1.38629 1.38629 1.38629
|
|
14315 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
14316 //
|
|
14317 HMMER3/f [3.2.1 | June 2018]
|
|
14318 NAME long.60.aln
|
|
14319 LENG 70
|
|
14320 MAXL 160
|
|
14321 ALPH DNA
|
|
14322 RF no
|
|
14323 MM no
|
|
14324 CONS yes
|
|
14325 CS no
|
|
14326 MAP yes
|
|
14327 DATE Tue May 28 13:12:04 2019
|
|
14328 NSEQ 2
|
|
14329 EFFN 2.000000
|
|
14330 CKSUM 1614228065
|
|
14331 STATS LOCAL MSV -8.0118 0.72018
|
|
14332 STATS LOCAL VITERBI -9.2620 0.72018
|
|
14333 STATS LOCAL FORWARD -3.4720 0.72018
|
|
14334 HMM A C G T
|
|
14335 m->m m->i m->d i->m i->i d->m d->d
|
|
14336 COMPO 1.11324 1.67408 1.37191 1.46793
|
|
14337 1.38629 1.38629 1.38629 1.38629
|
|
14338 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
14339 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
|
|
14340 1.38629 1.38629 1.38629 1.38629
|
|
14341 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14342 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
|
|
14343 1.38629 1.38629 1.38629 1.38629
|
|
14344 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14345 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
|
|
14346 1.38629 1.38629 1.38629 1.38629
|
|
14347 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14348 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
|
|
14349 1.38629 1.38629 1.38629 1.38629
|
|
14350 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14351 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
|
|
14352 1.38629 1.38629 1.38629 1.38629
|
|
14353 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14354 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
|
|
14355 1.38629 1.38629 1.38629 1.38629
|
|
14356 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14357 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
14358 1.38629 1.38629 1.38629 1.38629
|
|
14359 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14360 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
|
|
14361 1.38629 1.38629 1.38629 1.38629
|
|
14362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14363 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
|
|
14364 1.38629 1.38629 1.38629 1.38629
|
|
14365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14366 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
14367 1.38629 1.38629 1.38629 1.38629
|
|
14368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14369 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
14370 1.38629 1.38629 1.38629 1.38629
|
|
14371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14372 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
|
|
14373 1.38629 1.38629 1.38629 1.38629
|
|
14374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14375 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
|
|
14376 1.38629 1.38629 1.38629 1.38629
|
|
14377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14378 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
|
|
14379 1.38629 1.38629 1.38629 1.38629
|
|
14380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14381 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
|
|
14382 1.38629 1.38629 1.38629 1.38629
|
|
14383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14384 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
|
|
14385 1.38629 1.38629 1.38629 1.38629
|
|
14386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14387 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
|
|
14388 1.38629 1.38629 1.38629 1.38629
|
|
14389 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14390 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
|
|
14391 1.38629 1.38629 1.38629 1.38629
|
|
14392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14393 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
|
|
14394 1.38629 1.38629 1.38629 1.38629
|
|
14395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14396 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
14397 1.38629 1.38629 1.38629 1.38629
|
|
14398 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14399 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
14400 1.38629 1.38629 1.38629 1.38629
|
|
14401 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14402 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
|
|
14403 1.38629 1.38629 1.38629 1.38629
|
|
14404 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14405 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
14406 1.38629 1.38629 1.38629 1.38629
|
|
14407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14408 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
|
|
14409 1.38629 1.38629 1.38629 1.38629
|
|
14410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14411 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
|
|
14412 1.38629 1.38629 1.38629 1.38629
|
|
14413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14414 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
|
|
14415 1.38629 1.38629 1.38629 1.38629
|
|
14416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14417 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
14418 1.38629 1.38629 1.38629 1.38629
|
|
14419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14420 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
|
|
14421 1.38629 1.38629 1.38629 1.38629
|
|
14422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14423 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
|
|
14424 1.38629 1.38629 1.38629 1.38629
|
|
14425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14426 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
|
|
14427 1.38629 1.38629 1.38629 1.38629
|
|
14428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14429 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
|
|
14430 1.38629 1.38629 1.38629 1.38629
|
|
14431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14432 32 2.38910 2.82844 0.25233 2.62837 32 g - - -
|
|
14433 1.38629 1.38629 1.38629 1.38629
|
|
14434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14435 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
|
|
14436 1.38629 1.38629 1.38629 1.38629
|
|
14437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14438 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
14439 1.38629 1.38629 1.38629 1.38629
|
|
14440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14441 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
|
|
14442 1.38629 1.38629 1.38629 1.38629
|
|
14443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14444 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
14445 1.38629 1.38629 1.38629 1.38629
|
|
14446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14447 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
14448 1.38629 1.38629 1.38629 1.38629
|
|
14449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14450 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
|
|
14451 1.38629 1.38629 1.38629 1.38629
|
|
14452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14453 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
14454 1.38629 1.38629 1.38629 1.38629
|
|
14455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14456 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
14457 1.38629 1.38629 1.38629 1.38629
|
|
14458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14459 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
|
|
14460 1.38629 1.38629 1.38629 1.38629
|
|
14461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14462 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
|
|
14463 1.38629 1.38629 1.38629 1.38629
|
|
14464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14465 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
14466 1.38629 1.38629 1.38629 1.38629
|
|
14467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14468 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
|
|
14469 1.38629 1.38629 1.38629 1.38629
|
|
14470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14471 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
|
|
14472 1.38629 1.38629 1.38629 1.38629
|
|
14473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14474 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
|
|
14475 1.38629 1.38629 1.38629 1.38629
|
|
14476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14477 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
|
|
14478 1.38629 1.38629 1.38629 1.38629
|
|
14479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14480 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
|
|
14481 1.38629 1.38629 1.38629 1.38629
|
|
14482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14483 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
|
|
14484 1.38629 1.38629 1.38629 1.38629
|
|
14485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14486 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
|
|
14487 1.38629 1.38629 1.38629 1.38629
|
|
14488 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14489 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
|
|
14490 1.38629 1.38629 1.38629 1.38629
|
|
14491 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14492 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
14493 1.38629 1.38629 1.38629 1.38629
|
|
14494 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14495 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
|
|
14496 1.38629 1.38629 1.38629 1.38629
|
|
14497 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14498 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
|
|
14499 1.38629 1.38629 1.38629 1.38629
|
|
14500 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14501 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
|
|
14502 1.38629 1.38629 1.38629 1.38629
|
|
14503 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14504 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
|
|
14505 1.38629 1.38629 1.38629 1.38629
|
|
14506 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14507 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
|
|
14508 1.38629 1.38629 1.38629 1.38629
|
|
14509 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14510 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
|
|
14511 1.38629 1.38629 1.38629 1.38629
|
|
14512 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14513 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
|
|
14514 1.38629 1.38629 1.38629 1.38629
|
|
14515 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14516 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
14517 1.38629 1.38629 1.38629 1.38629
|
|
14518 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14519 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
14520 1.38629 1.38629 1.38629 1.38629
|
|
14521 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14522 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
14523 1.38629 1.38629 1.38629 1.38629
|
|
14524 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14525 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
|
|
14526 1.38629 1.38629 1.38629 1.38629
|
|
14527 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14528 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
|
|
14529 1.38629 1.38629 1.38629 1.38629
|
|
14530 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14531 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
|
|
14532 1.38629 1.38629 1.38629 1.38629
|
|
14533 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14534 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
14535 1.38629 1.38629 1.38629 1.38629
|
|
14536 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14537 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
|
|
14538 1.38629 1.38629 1.38629 1.38629
|
|
14539 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14540 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
|
|
14541 1.38629 1.38629 1.38629 1.38629
|
|
14542 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14543 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
14544 1.38629 1.38629 1.38629 1.38629
|
|
14545 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14546 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
14547 1.38629 1.38629 1.38629 1.38629
|
|
14548 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
14549 //
|
|
14550 HMMER3/f [3.2.1 | June 2018]
|
|
14551 NAME long.61.aln
|
|
14552 LENG 70
|
|
14553 MAXL 160
|
|
14554 ALPH DNA
|
|
14555 RF no
|
|
14556 MM no
|
|
14557 CONS yes
|
|
14558 CS no
|
|
14559 MAP yes
|
|
14560 DATE Tue May 28 13:12:04 2019
|
|
14561 NSEQ 2
|
|
14562 EFFN 2.000000
|
|
14563 CKSUM 2408145248
|
|
14564 STATS LOCAL MSV -7.8359 0.72000
|
|
14565 STATS LOCAL VITERBI -9.0846 0.72000
|
|
14566 STATS LOCAL FORWARD -3.5699 0.72000
|
|
14567 HMM A C G T
|
|
14568 m->m m->i m->d i->m i->i d->m d->d
|
|
14569 COMPO 1.19531 1.63705 1.27077 1.50408
|
|
14570 1.38629 1.38629 1.38629 1.38629
|
|
14571 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
14572 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
|
|
14573 1.38629 1.38629 1.38629 1.38629
|
|
14574 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14575 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
|
|
14576 1.38629 1.38629 1.38629 1.38629
|
|
14577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14578 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
|
|
14579 1.38629 1.38629 1.38629 1.38629
|
|
14580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14581 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
|
|
14582 1.38629 1.38629 1.38629 1.38629
|
|
14583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14584 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
|
|
14585 1.38629 1.38629 1.38629 1.38629
|
|
14586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14587 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
14588 1.38629 1.38629 1.38629 1.38629
|
|
14589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14590 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
|
|
14591 1.38629 1.38629 1.38629 1.38629
|
|
14592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14593 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
|
|
14594 1.38629 1.38629 1.38629 1.38629
|
|
14595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14596 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
14597 1.38629 1.38629 1.38629 1.38629
|
|
14598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14599 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
14600 1.38629 1.38629 1.38629 1.38629
|
|
14601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14602 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
|
|
14603 1.38629 1.38629 1.38629 1.38629
|
|
14604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14605 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
|
|
14606 1.38629 1.38629 1.38629 1.38629
|
|
14607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14608 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
|
|
14609 1.38629 1.38629 1.38629 1.38629
|
|
14610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14611 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
14612 1.38629 1.38629 1.38629 1.38629
|
|
14613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14614 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
|
|
14615 1.38629 1.38629 1.38629 1.38629
|
|
14616 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14617 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
|
|
14618 1.38629 1.38629 1.38629 1.38629
|
|
14619 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14620 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
|
|
14621 1.38629 1.38629 1.38629 1.38629
|
|
14622 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14623 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
|
|
14624 1.38629 1.38629 1.38629 1.38629
|
|
14625 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14626 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
|
|
14627 1.38629 1.38629 1.38629 1.38629
|
|
14628 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14629 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
|
|
14630 1.38629 1.38629 1.38629 1.38629
|
|
14631 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14632 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
|
|
14633 1.38629 1.38629 1.38629 1.38629
|
|
14634 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14635 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
|
|
14636 1.38629 1.38629 1.38629 1.38629
|
|
14637 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14638 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
14639 1.38629 1.38629 1.38629 1.38629
|
|
14640 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14641 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
14642 1.38629 1.38629 1.38629 1.38629
|
|
14643 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14644 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
|
|
14645 1.38629 1.38629 1.38629 1.38629
|
|
14646 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14647 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
|
|
14648 1.38629 1.38629 1.38629 1.38629
|
|
14649 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14650 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
|
|
14651 1.38629 1.38629 1.38629 1.38629
|
|
14652 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14653 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
14654 1.38629 1.38629 1.38629 1.38629
|
|
14655 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14656 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
|
|
14657 1.38629 1.38629 1.38629 1.38629
|
|
14658 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14659 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
|
|
14660 1.38629 1.38629 1.38629 1.38629
|
|
14661 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14662 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
|
|
14663 1.38629 1.38629 1.38629 1.38629
|
|
14664 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14665 32 2.38910 2.82844 0.25233 2.62837 32 g - - -
|
|
14666 1.38629 1.38629 1.38629 1.38629
|
|
14667 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14668 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
14669 1.38629 1.38629 1.38629 1.38629
|
|
14670 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14671 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
|
|
14672 1.38629 1.38629 1.38629 1.38629
|
|
14673 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14674 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
14675 1.38629 1.38629 1.38629 1.38629
|
|
14676 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14677 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
14678 1.38629 1.38629 1.38629 1.38629
|
|
14679 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14680 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
|
|
14681 1.38629 1.38629 1.38629 1.38629
|
|
14682 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14683 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
|
|
14684 1.38629 1.38629 1.38629 1.38629
|
|
14685 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14686 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
|
|
14687 1.38629 1.38629 1.38629 1.38629
|
|
14688 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14689 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
14690 1.38629 1.38629 1.38629 1.38629
|
|
14691 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14692 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
|
|
14693 1.38629 1.38629 1.38629 1.38629
|
|
14694 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14695 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
|
|
14696 1.38629 1.38629 1.38629 1.38629
|
|
14697 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14698 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
14699 1.38629 1.38629 1.38629 1.38629
|
|
14700 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14701 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
14702 1.38629 1.38629 1.38629 1.38629
|
|
14703 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14704 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
|
|
14705 1.38629 1.38629 1.38629 1.38629
|
|
14706 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14707 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
|
|
14708 1.38629 1.38629 1.38629 1.38629
|
|
14709 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14710 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
|
|
14711 1.38629 1.38629 1.38629 1.38629
|
|
14712 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14713 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
|
|
14714 1.38629 1.38629 1.38629 1.38629
|
|
14715 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14716 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
|
|
14717 1.38629 1.38629 1.38629 1.38629
|
|
14718 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14719 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
|
|
14720 1.38629 1.38629 1.38629 1.38629
|
|
14721 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14722 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
|
|
14723 1.38629 1.38629 1.38629 1.38629
|
|
14724 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14725 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
|
|
14726 1.38629 1.38629 1.38629 1.38629
|
|
14727 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14728 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
|
|
14729 1.38629 1.38629 1.38629 1.38629
|
|
14730 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14731 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
|
|
14732 1.38629 1.38629 1.38629 1.38629
|
|
14733 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14734 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
|
|
14735 1.38629 1.38629 1.38629 1.38629
|
|
14736 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14737 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
14738 1.38629 1.38629 1.38629 1.38629
|
|
14739 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14740 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
|
|
14741 1.38629 1.38629 1.38629 1.38629
|
|
14742 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14743 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
14744 1.38629 1.38629 1.38629 1.38629
|
|
14745 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14746 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
|
|
14747 1.38629 1.38629 1.38629 1.38629
|
|
14748 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14749 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
14750 1.38629 1.38629 1.38629 1.38629
|
|
14751 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14752 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
14753 1.38629 1.38629 1.38629 1.38629
|
|
14754 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14755 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
14756 1.38629 1.38629 1.38629 1.38629
|
|
14757 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14758 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
|
|
14759 1.38629 1.38629 1.38629 1.38629
|
|
14760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14761 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
|
|
14762 1.38629 1.38629 1.38629 1.38629
|
|
14763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14764 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
|
|
14765 1.38629 1.38629 1.38629 1.38629
|
|
14766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14767 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
14768 1.38629 1.38629 1.38629 1.38629
|
|
14769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14770 67 2.38910 2.82844 0.25233 2.62837 67 g - - -
|
|
14771 1.38629 1.38629 1.38629 1.38629
|
|
14772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14773 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
|
|
14774 1.38629 1.38629 1.38629 1.38629
|
|
14775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14776 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
|
|
14777 1.38629 1.38629 1.38629 1.38629
|
|
14778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14779 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
|
|
14780 1.38629 1.38629 1.38629 1.38629
|
|
14781 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
14782 //
|
|
14783 HMMER3/f [3.2.1 | June 2018]
|
|
14784 NAME long.62.aln
|
|
14785 LENG 70
|
|
14786 MAXL 160
|
|
14787 ALPH DNA
|
|
14788 RF no
|
|
14789 MM no
|
|
14790 CONS yes
|
|
14791 CS no
|
|
14792 MAP yes
|
|
14793 DATE Tue May 28 13:12:03 2019
|
|
14794 NSEQ 2
|
|
14795 EFFN 2.000000
|
|
14796 CKSUM 1574236373
|
|
14797 STATS LOCAL MSV -7.9394 0.72062
|
|
14798 STATS LOCAL VITERBI -9.3943 0.72062
|
|
14799 STATS LOCAL FORWARD -3.3008 0.72062
|
|
14800 HMM A C G T
|
|
14801 m->m m->i m->d i->m i->i d->m d->d
|
|
14802 COMPO 0.94586 1.62365 1.70321 1.45938
|
|
14803 1.38629 1.38629 1.38629 1.38629
|
|
14804 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
14805 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
|
|
14806 1.38629 1.38629 1.38629 1.38629
|
|
14807 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14808 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
|
|
14809 1.38629 1.38629 1.38629 1.38629
|
|
14810 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14811 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
|
|
14812 1.38629 1.38629 1.38629 1.38629
|
|
14813 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14814 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
|
|
14815 1.38629 1.38629 1.38629 1.38629
|
|
14816 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14817 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
|
|
14818 1.38629 1.38629 1.38629 1.38629
|
|
14819 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14820 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
14821 1.38629 1.38629 1.38629 1.38629
|
|
14822 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14823 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
14824 1.38629 1.38629 1.38629 1.38629
|
|
14825 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14826 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
|
|
14827 1.38629 1.38629 1.38629 1.38629
|
|
14828 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14829 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
14830 1.38629 1.38629 1.38629 1.38629
|
|
14831 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14832 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
14833 1.38629 1.38629 1.38629 1.38629
|
|
14834 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14835 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
|
|
14836 1.38629 1.38629 1.38629 1.38629
|
|
14837 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14838 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
14839 1.38629 1.38629 1.38629 1.38629
|
|
14840 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14841 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
|
|
14842 1.38629 1.38629 1.38629 1.38629
|
|
14843 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14844 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
14845 1.38629 1.38629 1.38629 1.38629
|
|
14846 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14847 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
|
|
14848 1.38629 1.38629 1.38629 1.38629
|
|
14849 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14850 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
|
|
14851 1.38629 1.38629 1.38629 1.38629
|
|
14852 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14853 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
|
|
14854 1.38629 1.38629 1.38629 1.38629
|
|
14855 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14856 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
|
|
14857 1.38629 1.38629 1.38629 1.38629
|
|
14858 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14859 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
|
|
14860 1.38629 1.38629 1.38629 1.38629
|
|
14861 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14862 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
|
|
14863 1.38629 1.38629 1.38629 1.38629
|
|
14864 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14865 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
|
|
14866 1.38629 1.38629 1.38629 1.38629
|
|
14867 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14868 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
|
|
14869 1.38629 1.38629 1.38629 1.38629
|
|
14870 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14871 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
14872 1.38629 1.38629 1.38629 1.38629
|
|
14873 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14874 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
14875 1.38629 1.38629 1.38629 1.38629
|
|
14876 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14877 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
|
|
14878 1.38629 1.38629 1.38629 1.38629
|
|
14879 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14880 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
|
|
14881 1.38629 1.38629 1.38629 1.38629
|
|
14882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14883 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
14884 1.38629 1.38629 1.38629 1.38629
|
|
14885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14886 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
|
|
14887 1.38629 1.38629 1.38629 1.38629
|
|
14888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14889 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
14890 1.38629 1.38629 1.38629 1.38629
|
|
14891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14892 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
|
|
14893 1.38629 1.38629 1.38629 1.38629
|
|
14894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14895 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
14896 1.38629 1.38629 1.38629 1.38629
|
|
14897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14898 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
14899 1.38629 1.38629 1.38629 1.38629
|
|
14900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14901 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
|
|
14902 1.38629 1.38629 1.38629 1.38629
|
|
14903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14904 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
14905 1.38629 1.38629 1.38629 1.38629
|
|
14906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14907 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
|
|
14908 1.38629 1.38629 1.38629 1.38629
|
|
14909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14910 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
14911 1.38629 1.38629 1.38629 1.38629
|
|
14912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14913 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
|
|
14914 1.38629 1.38629 1.38629 1.38629
|
|
14915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14916 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
|
|
14917 1.38629 1.38629 1.38629 1.38629
|
|
14918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14919 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
14920 1.38629 1.38629 1.38629 1.38629
|
|
14921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14922 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
|
|
14923 1.38629 1.38629 1.38629 1.38629
|
|
14924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14925 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
|
|
14926 1.38629 1.38629 1.38629 1.38629
|
|
14927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14928 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
14929 1.38629 1.38629 1.38629 1.38629
|
|
14930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14931 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
|
|
14932 1.38629 1.38629 1.38629 1.38629
|
|
14933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14934 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
14935 1.38629 1.38629 1.38629 1.38629
|
|
14936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14937 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
14938 1.38629 1.38629 1.38629 1.38629
|
|
14939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14940 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
14941 1.38629 1.38629 1.38629 1.38629
|
|
14942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14943 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
|
|
14944 1.38629 1.38629 1.38629 1.38629
|
|
14945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14946 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
|
|
14947 1.38629 1.38629 1.38629 1.38629
|
|
14948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14949 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
|
|
14950 1.38629 1.38629 1.38629 1.38629
|
|
14951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14952 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
|
|
14953 1.38629 1.38629 1.38629 1.38629
|
|
14954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14955 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
|
|
14956 1.38629 1.38629 1.38629 1.38629
|
|
14957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14958 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
14959 1.38629 1.38629 1.38629 1.38629
|
|
14960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14961 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
|
|
14962 1.38629 1.38629 1.38629 1.38629
|
|
14963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14964 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
14965 1.38629 1.38629 1.38629 1.38629
|
|
14966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14967 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
14968 1.38629 1.38629 1.38629 1.38629
|
|
14969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14970 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
14971 1.38629 1.38629 1.38629 1.38629
|
|
14972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14973 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
|
|
14974 1.38629 1.38629 1.38629 1.38629
|
|
14975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14976 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
14977 1.38629 1.38629 1.38629 1.38629
|
|
14978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14979 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
14980 1.38629 1.38629 1.38629 1.38629
|
|
14981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14982 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
14983 1.38629 1.38629 1.38629 1.38629
|
|
14984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14985 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
14986 1.38629 1.38629 1.38629 1.38629
|
|
14987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14988 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
14989 1.38629 1.38629 1.38629 1.38629
|
|
14990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14991 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
14992 1.38629 1.38629 1.38629 1.38629
|
|
14993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14994 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
|
|
14995 1.38629 1.38629 1.38629 1.38629
|
|
14996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
14997 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
14998 1.38629 1.38629 1.38629 1.38629
|
|
14999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15000 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
15001 1.38629 1.38629 1.38629 1.38629
|
|
15002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15003 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
|
|
15004 1.38629 1.38629 1.38629 1.38629
|
|
15005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15006 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
|
|
15007 1.38629 1.38629 1.38629 1.38629
|
|
15008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15009 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
|
|
15010 1.38629 1.38629 1.38629 1.38629
|
|
15011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15012 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
|
|
15013 1.38629 1.38629 1.38629 1.38629
|
|
15014 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
15015 //
|
|
15016 HMMER3/f [3.2.1 | June 2018]
|
|
15017 NAME long.63.aln
|
|
15018 LENG 70
|
|
15019 MAXL 160
|
|
15020 ALPH DNA
|
|
15021 RF no
|
|
15022 MM no
|
|
15023 CONS yes
|
|
15024 CS no
|
|
15025 MAP yes
|
|
15026 DATE Tue May 28 13:12:04 2019
|
|
15027 NSEQ 2
|
|
15028 EFFN 2.000000
|
|
15029 CKSUM 1581685751
|
|
15030 STATS LOCAL MSV -8.3992 0.72064
|
|
15031 STATS LOCAL VITERBI -9.5309 0.72064
|
|
15032 STATS LOCAL FORWARD -3.5039 0.72064
|
|
15033 HMM A C G T
|
|
15034 m->m m->i m->d i->m i->i d->m d->d
|
|
15035 COMPO 1.06213 1.62061 1.56496 1.39671
|
|
15036 1.38629 1.38629 1.38629 1.38629
|
|
15037 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
15038 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
|
|
15039 1.38629 1.38629 1.38629 1.38629
|
|
15040 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15041 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
|
|
15042 1.38629 1.38629 1.38629 1.38629
|
|
15043 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15044 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
|
|
15045 1.38629 1.38629 1.38629 1.38629
|
|
15046 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15047 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
|
|
15048 1.38629 1.38629 1.38629 1.38629
|
|
15049 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15050 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
15051 1.38629 1.38629 1.38629 1.38629
|
|
15052 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15053 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
|
|
15054 1.38629 1.38629 1.38629 1.38629
|
|
15055 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15056 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
15057 1.38629 1.38629 1.38629 1.38629
|
|
15058 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15059 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
|
|
15060 1.38629 1.38629 1.38629 1.38629
|
|
15061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15062 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
|
|
15063 1.38629 1.38629 1.38629 1.38629
|
|
15064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15065 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
|
|
15066 1.38629 1.38629 1.38629 1.38629
|
|
15067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15068 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
|
|
15069 1.38629 1.38629 1.38629 1.38629
|
|
15070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15071 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
|
|
15072 1.38629 1.38629 1.38629 1.38629
|
|
15073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15074 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
|
|
15075 1.38629 1.38629 1.38629 1.38629
|
|
15076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15077 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
15078 1.38629 1.38629 1.38629 1.38629
|
|
15079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15080 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
|
|
15081 1.38629 1.38629 1.38629 1.38629
|
|
15082 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15083 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
|
|
15084 1.38629 1.38629 1.38629 1.38629
|
|
15085 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15086 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
15087 1.38629 1.38629 1.38629 1.38629
|
|
15088 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15089 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
15090 1.38629 1.38629 1.38629 1.38629
|
|
15091 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15092 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
|
|
15093 1.38629 1.38629 1.38629 1.38629
|
|
15094 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15095 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
|
|
15096 1.38629 1.38629 1.38629 1.38629
|
|
15097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15098 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
|
|
15099 1.38629 1.38629 1.38629 1.38629
|
|
15100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15101 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
15102 1.38629 1.38629 1.38629 1.38629
|
|
15103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15104 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
15105 1.38629 1.38629 1.38629 1.38629
|
|
15106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15107 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
|
|
15108 1.38629 1.38629 1.38629 1.38629
|
|
15109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15110 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
15111 1.38629 1.38629 1.38629 1.38629
|
|
15112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15113 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
15114 1.38629 1.38629 1.38629 1.38629
|
|
15115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15116 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
15117 1.38629 1.38629 1.38629 1.38629
|
|
15118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15119 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
15120 1.38629 1.38629 1.38629 1.38629
|
|
15121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15122 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
|
|
15123 1.38629 1.38629 1.38629 1.38629
|
|
15124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15125 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
|
|
15126 1.38629 1.38629 1.38629 1.38629
|
|
15127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15128 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
|
|
15129 1.38629 1.38629 1.38629 1.38629
|
|
15130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15131 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
15132 1.38629 1.38629 1.38629 1.38629
|
|
15133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15134 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
|
|
15135 1.38629 1.38629 1.38629 1.38629
|
|
15136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15137 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
15138 1.38629 1.38629 1.38629 1.38629
|
|
15139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15140 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
|
|
15141 1.38629 1.38629 1.38629 1.38629
|
|
15142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15143 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
|
|
15144 1.38629 1.38629 1.38629 1.38629
|
|
15145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15146 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
15147 1.38629 1.38629 1.38629 1.38629
|
|
15148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15149 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
|
|
15150 1.38629 1.38629 1.38629 1.38629
|
|
15151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15152 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
|
|
15153 1.38629 1.38629 1.38629 1.38629
|
|
15154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15155 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
|
|
15156 1.38629 1.38629 1.38629 1.38629
|
|
15157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15158 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
|
|
15159 1.38629 1.38629 1.38629 1.38629
|
|
15160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15161 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
15162 1.38629 1.38629 1.38629 1.38629
|
|
15163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15164 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
15165 1.38629 1.38629 1.38629 1.38629
|
|
15166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15167 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
|
|
15168 1.38629 1.38629 1.38629 1.38629
|
|
15169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15170 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
|
|
15171 1.38629 1.38629 1.38629 1.38629
|
|
15172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15173 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
15174 1.38629 1.38629 1.38629 1.38629
|
|
15175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15176 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
15177 1.38629 1.38629 1.38629 1.38629
|
|
15178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15179 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
|
|
15180 1.38629 1.38629 1.38629 1.38629
|
|
15181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15182 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
|
|
15183 1.38629 1.38629 1.38629 1.38629
|
|
15184 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15185 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
|
|
15186 1.38629 1.38629 1.38629 1.38629
|
|
15187 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15188 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
15189 1.38629 1.38629 1.38629 1.38629
|
|
15190 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15191 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
|
|
15192 1.38629 1.38629 1.38629 1.38629
|
|
15193 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15194 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
15195 1.38629 1.38629 1.38629 1.38629
|
|
15196 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15197 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
|
|
15198 1.38629 1.38629 1.38629 1.38629
|
|
15199 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15200 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
|
|
15201 1.38629 1.38629 1.38629 1.38629
|
|
15202 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15203 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
15204 1.38629 1.38629 1.38629 1.38629
|
|
15205 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15206 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
|
|
15207 1.38629 1.38629 1.38629 1.38629
|
|
15208 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15209 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
|
|
15210 1.38629 1.38629 1.38629 1.38629
|
|
15211 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15212 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
15213 1.38629 1.38629 1.38629 1.38629
|
|
15214 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15215 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
|
|
15216 1.38629 1.38629 1.38629 1.38629
|
|
15217 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15218 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
|
|
15219 1.38629 1.38629 1.38629 1.38629
|
|
15220 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15221 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
15222 1.38629 1.38629 1.38629 1.38629
|
|
15223 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15224 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
|
|
15225 1.38629 1.38629 1.38629 1.38629
|
|
15226 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15227 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
15228 1.38629 1.38629 1.38629 1.38629
|
|
15229 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15230 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
15231 1.38629 1.38629 1.38629 1.38629
|
|
15232 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15233 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
|
|
15234 1.38629 1.38629 1.38629 1.38629
|
|
15235 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15236 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
15237 1.38629 1.38629 1.38629 1.38629
|
|
15238 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15239 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
|
|
15240 1.38629 1.38629 1.38629 1.38629
|
|
15241 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15242 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
15243 1.38629 1.38629 1.38629 1.38629
|
|
15244 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15245 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
15246 1.38629 1.38629 1.38629 1.38629
|
|
15247 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
15248 //
|
|
15249 HMMER3/f [3.2.1 | June 2018]
|
|
15250 NAME long.64.aln
|
|
15251 LENG 80
|
|
15252 MAXL 174
|
|
15253 ALPH DNA
|
|
15254 RF no
|
|
15255 MM no
|
|
15256 CONS yes
|
|
15257 CS no
|
|
15258 MAP yes
|
|
15259 DATE Tue May 28 13:12:04 2019
|
|
15260 NSEQ 2
|
|
15261 EFFN 2.000000
|
|
15262 CKSUM 1595177567
|
|
15263 STATS LOCAL MSV -8.1741 0.72087
|
|
15264 STATS LOCAL VITERBI -9.7059 0.72087
|
|
15265 STATS LOCAL FORWARD -3.6637 0.72087
|
|
15266 HMM A C G T
|
|
15267 m->m m->i m->d i->m i->i d->m d->d
|
|
15268 COMPO 1.12278 1.57946 1.40266 1.50238
|
|
15269 1.38629 1.38629 1.38629 1.38629
|
|
15270 0.33647 3.73767 1.33977 1.46634 0.26236 0.00000 *
|
|
15271 1 1.98342 0.60779 2.04641 1.66785 1 c - - -
|
|
15272 1.38629 1.38629 1.38629 1.38629
|
|
15273 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
15274 2 1.97267 2.25870 0.46443 2.05625 2 g - - -
|
|
15275 1.38629 1.38629 1.38629 1.38629
|
|
15276 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
15277 3 0.56139 2.08489 1.86185 1.89791 3 a - - -
|
|
15278 1.38629 1.38629 1.38629 1.38629
|
|
15279 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
15280 4 1.97267 2.25870 0.46443 2.05625 4 g - - -
|
|
15281 1.38629 1.38629 1.38629 1.38629
|
|
15282 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
15283 5 1.98342 0.60779 2.04641 1.66785 5 c - - -
|
|
15284 1.38629 1.38629 1.38629 1.38629
|
|
15285 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
15286 6 0.56139 2.08489 1.86185 1.89791 6 a - - -
|
|
15287 1.38629 1.38629 1.38629 1.38629
|
|
15288 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
15289 7 0.56139 2.08489 1.86185 1.89791 7 a - - -
|
|
15290 1.38629 1.38629 1.38629 1.38629
|
|
15291 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
15292 8 1.97267 2.25870 0.46443 2.05625 8 g - - -
|
|
15293 1.38629 1.38629 1.38629 1.38629
|
|
15294 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
15295 9 1.98342 0.60779 2.04641 1.66785 9 c - - -
|
|
15296 1.38629 1.38629 1.38629 1.38629
|
|
15297 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
15298 10 1.91091 1.78233 1.95844 0.61114 10 t - - -
|
|
15299 1.38629 1.38629 1.38629 1.38629
|
|
15300 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
|
|
15301 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
15302 1.38629 1.38629 1.38629 1.38629
|
|
15303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15304 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
|
|
15305 1.38629 1.38629 1.38629 1.38629
|
|
15306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15307 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
|
|
15308 1.38629 1.38629 1.38629 1.38629
|
|
15309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15310 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
|
|
15311 1.38629 1.38629 1.38629 1.38629
|
|
15312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15313 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
15314 1.38629 1.38629 1.38629 1.38629
|
|
15315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15316 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
|
|
15317 1.38629 1.38629 1.38629 1.38629
|
|
15318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15319 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
|
|
15320 1.38629 1.38629 1.38629 1.38629
|
|
15321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15322 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
15323 1.38629 1.38629 1.38629 1.38629
|
|
15324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15325 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
|
|
15326 1.38629 1.38629 1.38629 1.38629
|
|
15327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15328 20 1.84050 1.95342 1.03654 1.06480 20 g - - -
|
|
15329 1.38629 1.38629 1.38629 1.38629
|
|
15330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15331 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
|
|
15332 1.38629 1.38629 1.38629 1.38629
|
|
15333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15334 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
15335 1.38629 1.38629 1.38629 1.38629
|
|
15336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15337 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
15338 1.38629 1.38629 1.38629 1.38629
|
|
15339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15340 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
15341 1.38629 1.38629 1.38629 1.38629
|
|
15342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15343 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
|
|
15344 1.38629 1.38629 1.38629 1.38629
|
|
15345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15346 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
|
|
15347 1.38629 1.38629 1.38629 1.38629
|
|
15348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15349 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
15350 1.38629 1.38629 1.38629 1.38629
|
|
15351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15352 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
15353 1.38629 1.38629 1.38629 1.38629
|
|
15354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15355 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
|
|
15356 1.38629 1.38629 1.38629 1.38629
|
|
15357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15358 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
|
|
15359 1.38629 1.38629 1.38629 1.38629
|
|
15360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15361 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
|
|
15362 1.38629 1.38629 1.38629 1.38629
|
|
15363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15364 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
15365 1.38629 1.38629 1.38629 1.38629
|
|
15366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15367 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
15368 1.38629 1.38629 1.38629 1.38629
|
|
15369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15370 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
|
|
15371 1.38629 1.38629 1.38629 1.38629
|
|
15372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15373 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
|
|
15374 1.38629 1.38629 1.38629 1.38629
|
|
15375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15376 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
|
|
15377 1.38629 1.38629 1.38629 1.38629
|
|
15378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15379 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
|
|
15380 1.38629 1.38629 1.38629 1.38629
|
|
15381 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15382 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
|
|
15383 1.38629 1.38629 1.38629 1.38629
|
|
15384 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15385 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
|
|
15386 1.38629 1.38629 1.38629 1.38629
|
|
15387 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15388 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
15389 1.38629 1.38629 1.38629 1.38629
|
|
15390 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15391 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
|
|
15392 1.38629 1.38629 1.38629 1.38629
|
|
15393 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15394 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
|
|
15395 1.38629 1.38629 1.38629 1.38629
|
|
15396 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15397 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
|
|
15398 1.38629 1.38629 1.38629 1.38629
|
|
15399 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15400 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
15401 1.38629 1.38629 1.38629 1.38629
|
|
15402 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15403 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
|
|
15404 1.38629 1.38629 1.38629 1.38629
|
|
15405 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15406 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
|
|
15407 1.38629 1.38629 1.38629 1.38629
|
|
15408 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15409 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
|
|
15410 1.38629 1.38629 1.38629 1.38629
|
|
15411 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15412 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
|
|
15413 1.38629 1.38629 1.38629 1.38629
|
|
15414 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15415 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
|
|
15416 1.38629 1.38629 1.38629 1.38629
|
|
15417 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15418 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
|
|
15419 1.38629 1.38629 1.38629 1.38629
|
|
15420 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15421 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
15422 1.38629 1.38629 1.38629 1.38629
|
|
15423 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15424 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
|
|
15425 1.38629 1.38629 1.38629 1.38629
|
|
15426 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15427 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
|
|
15428 1.38629 1.38629 1.38629 1.38629
|
|
15429 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15430 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
15431 1.38629 1.38629 1.38629 1.38629
|
|
15432 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15433 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
15434 1.38629 1.38629 1.38629 1.38629
|
|
15435 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15436 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
15437 1.38629 1.38629 1.38629 1.38629
|
|
15438 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15439 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
|
|
15440 1.38629 1.38629 1.38629 1.38629
|
|
15441 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15442 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
|
|
15443 1.38629 1.38629 1.38629 1.38629
|
|
15444 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15445 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
|
|
15446 1.38629 1.38629 1.38629 1.38629
|
|
15447 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15448 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
|
|
15449 1.38629 1.38629 1.38629 1.38629
|
|
15450 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15451 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
|
|
15452 1.38629 1.38629 1.38629 1.38629
|
|
15453 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15454 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
15455 1.38629 1.38629 1.38629 1.38629
|
|
15456 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15457 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
15458 1.38629 1.38629 1.38629 1.38629
|
|
15459 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15460 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
15461 1.38629 1.38629 1.38629 1.38629
|
|
15462 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15463 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
|
|
15464 1.38629 1.38629 1.38629 1.38629
|
|
15465 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15466 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
15467 1.38629 1.38629 1.38629 1.38629
|
|
15468 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15469 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
|
|
15470 1.38629 1.38629 1.38629 1.38629
|
|
15471 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15472 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
|
|
15473 1.38629 1.38629 1.38629 1.38629
|
|
15474 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15475 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
15476 1.38629 1.38629 1.38629 1.38629
|
|
15477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15478 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
15479 1.38629 1.38629 1.38629 1.38629
|
|
15480 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
|
|
15481 71 1.91091 1.78233 1.95844 0.61114 71 t - - -
|
|
15482 1.38629 1.38629 1.38629 1.38629
|
|
15483 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
15484 72 1.97267 2.25870 0.46443 2.05625 72 g - - -
|
|
15485 1.38629 1.38629 1.38629 1.38629
|
|
15486 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
15487 73 1.91091 1.78233 1.95844 0.61114 73 t - - -
|
|
15488 1.38629 1.38629 1.38629 1.38629
|
|
15489 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
15490 74 0.56139 2.08489 1.86185 1.89791 74 a - - -
|
|
15491 1.38629 1.38629 1.38629 1.38629
|
|
15492 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
15493 75 0.56139 2.08489 1.86185 1.89791 75 a - - -
|
|
15494 1.38629 1.38629 1.38629 1.38629
|
|
15495 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
15496 76 1.97267 2.25870 0.46443 2.05625 76 g - - -
|
|
15497 1.38629 1.38629 1.38629 1.38629
|
|
15498 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
15499 77 0.56139 2.08489 1.86185 1.89791 77 a - - -
|
|
15500 1.38629 1.38629 1.38629 1.38629
|
|
15501 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
15502 78 1.98342 0.60779 2.04641 1.66785 78 c - - -
|
|
15503 1.38629 1.38629 1.38629 1.38629
|
|
15504 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
15505 79 1.91091 1.78233 1.95844 0.61114 79 t - - -
|
|
15506 1.38629 1.38629 1.38629 1.38629
|
|
15507 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
15508 80 0.56139 2.08489 1.86185 1.89791 80 a - - -
|
|
15509 1.38629 1.38629 1.38629 1.38629
|
|
15510 0.03279 3.43399 * 1.46634 0.26236 0.00000 *
|
|
15511 //
|
|
15512 HMMER3/f [3.2.1 | June 2018]
|
|
15513 NAME long.65.aln
|
|
15514 LENG 70
|
|
15515 MAXL 160
|
|
15516 ALPH DNA
|
|
15517 RF no
|
|
15518 MM no
|
|
15519 CONS yes
|
|
15520 CS no
|
|
15521 MAP yes
|
|
15522 DATE Tue May 28 13:12:04 2019
|
|
15523 NSEQ 2
|
|
15524 EFFN 2.000000
|
|
15525 CKSUM 4203419393
|
|
15526 STATS LOCAL MSV -7.9742 0.71970
|
|
15527 STATS LOCAL VITERBI -9.3402 0.71970
|
|
15528 STATS LOCAL FORWARD -3.2406 0.71970
|
|
15529 HMM A C G T
|
|
15530 m->m m->i m->d i->m i->i d->m d->d
|
|
15531 COMPO 1.03960 1.73335 1.30313 1.61932
|
|
15532 1.38629 1.38629 1.38629 1.38629
|
|
15533 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
15534 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
|
|
15535 1.38629 1.38629 1.38629 1.38629
|
|
15536 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15537 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
|
|
15538 1.38629 1.38629 1.38629 1.38629
|
|
15539 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15540 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
|
|
15541 1.38629 1.38629 1.38629 1.38629
|
|
15542 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15543 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
|
|
15544 1.38629 1.38629 1.38629 1.38629
|
|
15545 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15546 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
15547 1.38629 1.38629 1.38629 1.38629
|
|
15548 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15549 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
|
|
15550 1.38629 1.38629 1.38629 1.38629
|
|
15551 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15552 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
|
|
15553 1.38629 1.38629 1.38629 1.38629
|
|
15554 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15555 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
|
|
15556 1.38629 1.38629 1.38629 1.38629
|
|
15557 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15558 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
15559 1.38629 1.38629 1.38629 1.38629
|
|
15560 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15561 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
15562 1.38629 1.38629 1.38629 1.38629
|
|
15563 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15564 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
|
|
15565 1.38629 1.38629 1.38629 1.38629
|
|
15566 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15567 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
|
|
15568 1.38629 1.38629 1.38629 1.38629
|
|
15569 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15570 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
|
|
15571 1.38629 1.38629 1.38629 1.38629
|
|
15572 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15573 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
|
|
15574 1.38629 1.38629 1.38629 1.38629
|
|
15575 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15576 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
|
|
15577 1.38629 1.38629 1.38629 1.38629
|
|
15578 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15579 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
|
|
15580 1.38629 1.38629 1.38629 1.38629
|
|
15581 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15582 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
|
|
15583 1.38629 1.38629 1.38629 1.38629
|
|
15584 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15585 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
15586 1.38629 1.38629 1.38629 1.38629
|
|
15587 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15588 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
|
|
15589 1.38629 1.38629 1.38629 1.38629
|
|
15590 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15591 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
|
|
15592 1.38629 1.38629 1.38629 1.38629
|
|
15593 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15594 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
15595 1.38629 1.38629 1.38629 1.38629
|
|
15596 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15597 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
15598 1.38629 1.38629 1.38629 1.38629
|
|
15599 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15600 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
15601 1.38629 1.38629 1.38629 1.38629
|
|
15602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15603 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
|
|
15604 1.38629 1.38629 1.38629 1.38629
|
|
15605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15606 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
|
|
15607 1.38629 1.38629 1.38629 1.38629
|
|
15608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15609 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
15610 1.38629 1.38629 1.38629 1.38629
|
|
15611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15612 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
|
|
15613 1.38629 1.38629 1.38629 1.38629
|
|
15614 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15615 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
|
|
15616 1.38629 1.38629 1.38629 1.38629
|
|
15617 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15618 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
|
|
15619 1.38629 1.38629 1.38629 1.38629
|
|
15620 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15621 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
|
|
15622 1.38629 1.38629 1.38629 1.38629
|
|
15623 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15624 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
|
|
15625 1.38629 1.38629 1.38629 1.38629
|
|
15626 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15627 32 2.38910 2.82844 0.25233 2.62837 32 g - - -
|
|
15628 1.38629 1.38629 1.38629 1.38629
|
|
15629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15630 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
|
|
15631 1.38629 1.38629 1.38629 1.38629
|
|
15632 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15633 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
|
|
15634 1.38629 1.38629 1.38629 1.38629
|
|
15635 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15636 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
|
|
15637 1.38629 1.38629 1.38629 1.38629
|
|
15638 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15639 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
|
|
15640 1.38629 1.38629 1.38629 1.38629
|
|
15641 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15642 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
15643 1.38629 1.38629 1.38629 1.38629
|
|
15644 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15645 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
|
|
15646 1.38629 1.38629 1.38629 1.38629
|
|
15647 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15648 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
|
|
15649 1.38629 1.38629 1.38629 1.38629
|
|
15650 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15651 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
15652 1.38629 1.38629 1.38629 1.38629
|
|
15653 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15654 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
|
|
15655 1.38629 1.38629 1.38629 1.38629
|
|
15656 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15657 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
15658 1.38629 1.38629 1.38629 1.38629
|
|
15659 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15660 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
15661 1.38629 1.38629 1.38629 1.38629
|
|
15662 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15663 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
|
|
15664 1.38629 1.38629 1.38629 1.38629
|
|
15665 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15666 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
|
|
15667 1.38629 1.38629 1.38629 1.38629
|
|
15668 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15669 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
|
|
15670 1.38629 1.38629 1.38629 1.38629
|
|
15671 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15672 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
15673 1.38629 1.38629 1.38629 1.38629
|
|
15674 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15675 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
|
|
15676 1.38629 1.38629 1.38629 1.38629
|
|
15677 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15678 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
|
|
15679 1.38629 1.38629 1.38629 1.38629
|
|
15680 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15681 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
15682 1.38629 1.38629 1.38629 1.38629
|
|
15683 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15684 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
15685 1.38629 1.38629 1.38629 1.38629
|
|
15686 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15687 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
15688 1.38629 1.38629 1.38629 1.38629
|
|
15689 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15690 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
|
|
15691 1.38629 1.38629 1.38629 1.38629
|
|
15692 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15693 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
15694 1.38629 1.38629 1.38629 1.38629
|
|
15695 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15696 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
|
|
15697 1.38629 1.38629 1.38629 1.38629
|
|
15698 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15699 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
15700 1.38629 1.38629 1.38629 1.38629
|
|
15701 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15702 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
|
|
15703 1.38629 1.38629 1.38629 1.38629
|
|
15704 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15705 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
15706 1.38629 1.38629 1.38629 1.38629
|
|
15707 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15708 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
|
|
15709 1.38629 1.38629 1.38629 1.38629
|
|
15710 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15711 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
15712 1.38629 1.38629 1.38629 1.38629
|
|
15713 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15714 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
15715 1.38629 1.38629 1.38629 1.38629
|
|
15716 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15717 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
15718 1.38629 1.38629 1.38629 1.38629
|
|
15719 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15720 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
15721 1.38629 1.38629 1.38629 1.38629
|
|
15722 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15723 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
|
|
15724 1.38629 1.38629 1.38629 1.38629
|
|
15725 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15726 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
15727 1.38629 1.38629 1.38629 1.38629
|
|
15728 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15729 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
|
|
15730 1.38629 1.38629 1.38629 1.38629
|
|
15731 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15732 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
15733 1.38629 1.38629 1.38629 1.38629
|
|
15734 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15735 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
|
|
15736 1.38629 1.38629 1.38629 1.38629
|
|
15737 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15738 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
|
|
15739 1.38629 1.38629 1.38629 1.38629
|
|
15740 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15741 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
15742 1.38629 1.38629 1.38629 1.38629
|
|
15743 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
15744 //
|
|
15745 HMMER3/f [3.2.1 | June 2018]
|
|
15746 NAME long.66.aln
|
|
15747 LENG 70
|
|
15748 MAXL 160
|
|
15749 ALPH DNA
|
|
15750 RF no
|
|
15751 MM no
|
|
15752 CONS yes
|
|
15753 CS no
|
|
15754 MAP yes
|
|
15755 DATE Tue May 28 13:12:04 2019
|
|
15756 NSEQ 2
|
|
15757 EFFN 2.000000
|
|
15758 CKSUM 212902700
|
|
15759 STATS LOCAL MSV -8.4235 0.72226
|
|
15760 STATS LOCAL VITERBI -9.3579 0.72226
|
|
15761 STATS LOCAL FORWARD -3.4937 0.72226
|
|
15762 HMM A C G T
|
|
15763 m->m m->i m->d i->m i->i d->m d->d
|
|
15764 COMPO 1.51844 1.49446 1.65628 1.00586
|
|
15765 1.38629 1.38629 1.38629 1.38629
|
|
15766 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
15767 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
|
|
15768 1.38629 1.38629 1.38629 1.38629
|
|
15769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15770 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
|
|
15771 1.38629 1.38629 1.38629 1.38629
|
|
15772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15773 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
|
|
15774 1.38629 1.38629 1.38629 1.38629
|
|
15775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15776 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
|
|
15777 1.38629 1.38629 1.38629 1.38629
|
|
15778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15779 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
15780 1.38629 1.38629 1.38629 1.38629
|
|
15781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15782 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
15783 1.38629 1.38629 1.38629 1.38629
|
|
15784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15785 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
|
|
15786 1.38629 1.38629 1.38629 1.38629
|
|
15787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15788 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
15789 1.38629 1.38629 1.38629 1.38629
|
|
15790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15791 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
|
|
15792 1.38629 1.38629 1.38629 1.38629
|
|
15793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15794 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
15795 1.38629 1.38629 1.38629 1.38629
|
|
15796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15797 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
|
|
15798 1.38629 1.38629 1.38629 1.38629
|
|
15799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15800 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
|
|
15801 1.38629 1.38629 1.38629 1.38629
|
|
15802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15803 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
|
|
15804 1.38629 1.38629 1.38629 1.38629
|
|
15805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15806 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
15807 1.38629 1.38629 1.38629 1.38629
|
|
15808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15809 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
|
|
15810 1.38629 1.38629 1.38629 1.38629
|
|
15811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15812 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
|
|
15813 1.38629 1.38629 1.38629 1.38629
|
|
15814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15815 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
15816 1.38629 1.38629 1.38629 1.38629
|
|
15817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15818 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
15819 1.38629 1.38629 1.38629 1.38629
|
|
15820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15821 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
15822 1.38629 1.38629 1.38629 1.38629
|
|
15823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15824 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
|
|
15825 1.38629 1.38629 1.38629 1.38629
|
|
15826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15827 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
|
|
15828 1.38629 1.38629 1.38629 1.38629
|
|
15829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15830 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
|
|
15831 1.38629 1.38629 1.38629 1.38629
|
|
15832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15833 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
15834 1.38629 1.38629 1.38629 1.38629
|
|
15835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15836 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
|
|
15837 1.38629 1.38629 1.38629 1.38629
|
|
15838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15839 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
|
|
15840 1.38629 1.38629 1.38629 1.38629
|
|
15841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15842 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
15843 1.38629 1.38629 1.38629 1.38629
|
|
15844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15845 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
15846 1.38629 1.38629 1.38629 1.38629
|
|
15847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15848 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
|
|
15849 1.38629 1.38629 1.38629 1.38629
|
|
15850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15851 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
|
|
15852 1.38629 1.38629 1.38629 1.38629
|
|
15853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15854 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
|
|
15855 1.38629 1.38629 1.38629 1.38629
|
|
15856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15857 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
15858 1.38629 1.38629 1.38629 1.38629
|
|
15859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15860 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
15861 1.38629 1.38629 1.38629 1.38629
|
|
15862 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15863 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
15864 1.38629 1.38629 1.38629 1.38629
|
|
15865 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15866 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
15867 1.38629 1.38629 1.38629 1.38629
|
|
15868 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15869 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
|
|
15870 1.38629 1.38629 1.38629 1.38629
|
|
15871 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15872 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
|
|
15873 1.38629 1.38629 1.38629 1.38629
|
|
15874 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15875 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
|
|
15876 1.38629 1.38629 1.38629 1.38629
|
|
15877 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15878 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
|
|
15879 1.38629 1.38629 1.38629 1.38629
|
|
15880 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15881 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
15882 1.38629 1.38629 1.38629 1.38629
|
|
15883 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15884 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
|
|
15885 1.38629 1.38629 1.38629 1.38629
|
|
15886 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15887 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
|
|
15888 1.38629 1.38629 1.38629 1.38629
|
|
15889 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15890 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
|
|
15891 1.38629 1.38629 1.38629 1.38629
|
|
15892 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15893 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
15894 1.38629 1.38629 1.38629 1.38629
|
|
15895 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15896 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
|
|
15897 1.38629 1.38629 1.38629 1.38629
|
|
15898 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15899 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
|
|
15900 1.38629 1.38629 1.38629 1.38629
|
|
15901 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15902 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
|
|
15903 1.38629 1.38629 1.38629 1.38629
|
|
15904 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15905 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
|
|
15906 1.38629 1.38629 1.38629 1.38629
|
|
15907 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15908 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
|
|
15909 1.38629 1.38629 1.38629 1.38629
|
|
15910 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15911 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
|
|
15912 1.38629 1.38629 1.38629 1.38629
|
|
15913 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15914 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
|
|
15915 1.38629 1.38629 1.38629 1.38629
|
|
15916 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15917 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
15918 1.38629 1.38629 1.38629 1.38629
|
|
15919 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15920 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
|
|
15921 1.38629 1.38629 1.38629 1.38629
|
|
15922 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15923 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
|
|
15924 1.38629 1.38629 1.38629 1.38629
|
|
15925 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15926 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
|
|
15927 1.38629 1.38629 1.38629 1.38629
|
|
15928 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15929 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
|
|
15930 1.38629 1.38629 1.38629 1.38629
|
|
15931 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15932 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
15933 1.38629 1.38629 1.38629 1.38629
|
|
15934 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15935 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
|
|
15936 1.38629 1.38629 1.38629 1.38629
|
|
15937 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15938 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
15939 1.38629 1.38629 1.38629 1.38629
|
|
15940 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15941 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
|
|
15942 1.38629 1.38629 1.38629 1.38629
|
|
15943 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15944 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
15945 1.38629 1.38629 1.38629 1.38629
|
|
15946 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15947 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
15948 1.38629 1.38629 1.38629 1.38629
|
|
15949 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15950 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
|
|
15951 1.38629 1.38629 1.38629 1.38629
|
|
15952 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15953 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
15954 1.38629 1.38629 1.38629 1.38629
|
|
15955 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15956 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
15957 1.38629 1.38629 1.38629 1.38629
|
|
15958 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15959 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
|
|
15960 1.38629 1.38629 1.38629 1.38629
|
|
15961 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15962 66 0.28818 2.60848 2.42319 2.42940 66 a - - -
|
|
15963 1.38629 1.38629 1.38629 1.38629
|
|
15964 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15965 67 2.38910 2.82844 0.25233 2.62837 67 g - - -
|
|
15966 1.38629 1.38629 1.38629 1.38629
|
|
15967 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15968 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
|
|
15969 1.38629 1.38629 1.38629 1.38629
|
|
15970 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15971 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
|
|
15972 1.38629 1.38629 1.38629 1.38629
|
|
15973 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
15974 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
15975 1.38629 1.38629 1.38629 1.38629
|
|
15976 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
15977 //
|
|
15978 HMMER3/f [3.2.1 | June 2018]
|
|
15979 NAME long.67.aln
|
|
15980 LENG 70
|
|
15981 MAXL 160
|
|
15982 ALPH DNA
|
|
15983 RF no
|
|
15984 MM no
|
|
15985 CONS yes
|
|
15986 CS no
|
|
15987 MAP yes
|
|
15988 DATE Tue May 28 13:12:04 2019
|
|
15989 NSEQ 2
|
|
15990 EFFN 2.000000
|
|
15991 CKSUM 1592920432
|
|
15992 STATS LOCAL MSV -8.0355 0.72053
|
|
15993 STATS LOCAL VITERBI -9.2753 0.72053
|
|
15994 STATS LOCAL FORWARD -3.5978 0.72053
|
|
15995 HMM A C G T
|
|
15996 m->m m->i m->d i->m i->i d->m d->d
|
|
15997 COMPO 1.34795 1.43634 1.34031 1.42433
|
|
15998 1.38629 1.38629 1.38629 1.38629
|
|
15999 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
16000 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
|
|
16001 1.38629 1.38629 1.38629 1.38629
|
|
16002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16003 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
|
|
16004 1.38629 1.38629 1.38629 1.38629
|
|
16005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16006 3 2.38910 2.82844 0.25233 2.62837 3 g - - -
|
|
16007 1.38629 1.38629 1.38629 1.38629
|
|
16008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16009 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
|
|
16010 1.38629 1.38629 1.38629 1.38629
|
|
16011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16012 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
|
|
16013 1.38629 1.38629 1.38629 1.38629
|
|
16014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16015 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
|
|
16016 1.38629 1.38629 1.38629 1.38629
|
|
16017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16018 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
|
|
16019 1.38629 1.38629 1.38629 1.38629
|
|
16020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16021 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
|
|
16022 1.38629 1.38629 1.38629 1.38629
|
|
16023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16024 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
|
|
16025 1.38629 1.38629 1.38629 1.38629
|
|
16026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16027 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
16028 1.38629 1.38629 1.38629 1.38629
|
|
16029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16030 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
|
|
16031 1.38629 1.38629 1.38629 1.38629
|
|
16032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16033 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
|
|
16034 1.38629 1.38629 1.38629 1.38629
|
|
16035 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16036 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
|
|
16037 1.38629 1.38629 1.38629 1.38629
|
|
16038 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16039 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
|
|
16040 1.38629 1.38629 1.38629 1.38629
|
|
16041 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16042 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
|
|
16043 1.38629 1.38629 1.38629 1.38629
|
|
16044 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16045 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
|
|
16046 1.38629 1.38629 1.38629 1.38629
|
|
16047 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16048 17 2.38910 2.82844 0.25233 2.62837 17 g - - -
|
|
16049 1.38629 1.38629 1.38629 1.38629
|
|
16050 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16051 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
16052 1.38629 1.38629 1.38629 1.38629
|
|
16053 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16054 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
|
|
16055 1.38629 1.38629 1.38629 1.38629
|
|
16056 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16057 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
|
|
16058 1.38629 1.38629 1.38629 1.38629
|
|
16059 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16060 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
|
|
16061 1.38629 1.38629 1.38629 1.38629
|
|
16062 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16063 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
16064 1.38629 1.38629 1.38629 1.38629
|
|
16065 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16066 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
|
|
16067 1.38629 1.38629 1.38629 1.38629
|
|
16068 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16069 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
|
|
16070 1.38629 1.38629 1.38629 1.38629
|
|
16071 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16072 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
16073 1.38629 1.38629 1.38629 1.38629
|
|
16074 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16075 26 0.28818 2.60848 2.42319 2.42940 26 a - - -
|
|
16076 1.38629 1.38629 1.38629 1.38629
|
|
16077 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16078 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
16079 1.38629 1.38629 1.38629 1.38629
|
|
16080 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16081 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
|
|
16082 1.38629 1.38629 1.38629 1.38629
|
|
16083 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16084 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
|
|
16085 1.38629 1.38629 1.38629 1.38629
|
|
16086 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16087 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
|
|
16088 1.38629 1.38629 1.38629 1.38629
|
|
16089 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16090 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
|
|
16091 1.38629 1.38629 1.38629 1.38629
|
|
16092 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16093 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
16094 1.38629 1.38629 1.38629 1.38629
|
|
16095 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16096 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
|
|
16097 1.38629 1.38629 1.38629 1.38629
|
|
16098 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16099 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
|
|
16100 1.38629 1.38629 1.38629 1.38629
|
|
16101 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16102 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
16103 1.38629 1.38629 1.38629 1.38629
|
|
16104 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16105 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
16106 1.38629 1.38629 1.38629 1.38629
|
|
16107 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16108 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
16109 1.38629 1.38629 1.38629 1.38629
|
|
16110 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16111 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
|
|
16112 1.38629 1.38629 1.38629 1.38629
|
|
16113 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16114 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
16115 1.38629 1.38629 1.38629 1.38629
|
|
16116 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16117 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
16118 1.38629 1.38629 1.38629 1.38629
|
|
16119 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16120 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
|
|
16121 1.38629 1.38629 1.38629 1.38629
|
|
16122 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16123 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
16124 1.38629 1.38629 1.38629 1.38629
|
|
16125 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16126 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
|
|
16127 1.38629 1.38629 1.38629 1.38629
|
|
16128 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16129 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
|
|
16130 1.38629 1.38629 1.38629 1.38629
|
|
16131 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16132 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
|
|
16133 1.38629 1.38629 1.38629 1.38629
|
|
16134 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16135 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
16136 1.38629 1.38629 1.38629 1.38629
|
|
16137 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16138 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
|
|
16139 1.38629 1.38629 1.38629 1.38629
|
|
16140 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16141 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
|
|
16142 1.38629 1.38629 1.38629 1.38629
|
|
16143 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16144 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
|
|
16145 1.38629 1.38629 1.38629 1.38629
|
|
16146 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16147 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
|
|
16148 1.38629 1.38629 1.38629 1.38629
|
|
16149 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16150 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
|
|
16151 1.38629 1.38629 1.38629 1.38629
|
|
16152 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16153 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
16154 1.38629 1.38629 1.38629 1.38629
|
|
16155 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16156 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
|
|
16157 1.38629 1.38629 1.38629 1.38629
|
|
16158 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16159 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
|
|
16160 1.38629 1.38629 1.38629 1.38629
|
|
16161 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16162 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
|
|
16163 1.38629 1.38629 1.38629 1.38629
|
|
16164 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16165 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
|
|
16166 1.38629 1.38629 1.38629 1.38629
|
|
16167 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16168 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
|
|
16169 1.38629 1.38629 1.38629 1.38629
|
|
16170 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16171 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
|
|
16172 1.38629 1.38629 1.38629 1.38629
|
|
16173 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16174 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
|
|
16175 1.38629 1.38629 1.38629 1.38629
|
|
16176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16177 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
|
|
16178 1.38629 1.38629 1.38629 1.38629
|
|
16179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16180 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
|
|
16181 1.38629 1.38629 1.38629 1.38629
|
|
16182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16183 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
|
|
16184 1.38629 1.38629 1.38629 1.38629
|
|
16185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16186 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
|
|
16187 1.38629 1.38629 1.38629 1.38629
|
|
16188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16189 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
|
|
16190 1.38629 1.38629 1.38629 1.38629
|
|
16191 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16192 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
|
|
16193 1.38629 1.38629 1.38629 1.38629
|
|
16194 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16195 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
16196 1.38629 1.38629 1.38629 1.38629
|
|
16197 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16198 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
16199 1.38629 1.38629 1.38629 1.38629
|
|
16200 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16201 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
|
|
16202 1.38629 1.38629 1.38629 1.38629
|
|
16203 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16204 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
|
|
16205 1.38629 1.38629 1.38629 1.38629
|
|
16206 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16207 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
|
|
16208 1.38629 1.38629 1.38629 1.38629
|
|
16209 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
16210 //
|
|
16211 HMMER3/f [3.2.1 | June 2018]
|
|
16212 NAME long.68.aln
|
|
16213 LENG 70
|
|
16214 MAXL 160
|
|
16215 ALPH DNA
|
|
16216 RF no
|
|
16217 MM no
|
|
16218 CONS yes
|
|
16219 CS no
|
|
16220 MAP yes
|
|
16221 DATE Tue May 28 13:12:04 2019
|
|
16222 NSEQ 2
|
|
16223 EFFN 2.000000
|
|
16224 CKSUM 197613389
|
|
16225 STATS LOCAL MSV -8.1343 0.72116
|
|
16226 STATS LOCAL VITERBI -9.1178 0.72116
|
|
16227 STATS LOCAL FORWARD -3.4711 0.72116
|
|
16228 HMM A C G T
|
|
16229 m->m m->i m->d i->m i->i d->m d->d
|
|
16230 COMPO 1.48462 1.41899 1.41252 1.24507
|
|
16231 1.38629 1.38629 1.38629 1.38629
|
|
16232 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
16233 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
|
|
16234 1.38629 1.38629 1.38629 1.38629
|
|
16235 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16236 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
|
|
16237 1.38629 1.38629 1.38629 1.38629
|
|
16238 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16239 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
|
|
16240 1.38629 1.38629 1.38629 1.38629
|
|
16241 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16242 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
|
|
16243 1.38629 1.38629 1.38629 1.38629
|
|
16244 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16245 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
|
|
16246 1.38629 1.38629 1.38629 1.38629
|
|
16247 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16248 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
|
|
16249 1.38629 1.38629 1.38629 1.38629
|
|
16250 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16251 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
16252 1.38629 1.38629 1.38629 1.38629
|
|
16253 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16254 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
|
|
16255 1.38629 1.38629 1.38629 1.38629
|
|
16256 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16257 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
|
|
16258 1.38629 1.38629 1.38629 1.38629
|
|
16259 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16260 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
16261 1.38629 1.38629 1.38629 1.38629
|
|
16262 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16263 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
|
|
16264 1.38629 1.38629 1.38629 1.38629
|
|
16265 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16266 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
16267 1.38629 1.38629 1.38629 1.38629
|
|
16268 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16269 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
|
|
16270 1.38629 1.38629 1.38629 1.38629
|
|
16271 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16272 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
|
|
16273 1.38629 1.38629 1.38629 1.38629
|
|
16274 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16275 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
16276 1.38629 1.38629 1.38629 1.38629
|
|
16277 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16278 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
16279 1.38629 1.38629 1.38629 1.38629
|
|
16280 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16281 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
16282 1.38629 1.38629 1.38629 1.38629
|
|
16283 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16284 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
16285 1.38629 1.38629 1.38629 1.38629
|
|
16286 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16287 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
|
|
16288 1.38629 1.38629 1.38629 1.38629
|
|
16289 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16290 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
|
|
16291 1.38629 1.38629 1.38629 1.38629
|
|
16292 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16293 21 2.38910 2.82844 0.25233 2.62837 21 g - - -
|
|
16294 1.38629 1.38629 1.38629 1.38629
|
|
16295 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16296 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
|
|
16297 1.38629 1.38629 1.38629 1.38629
|
|
16298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16299 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
16300 1.38629 1.38629 1.38629 1.38629
|
|
16301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16302 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
|
|
16303 1.38629 1.38629 1.38629 1.38629
|
|
16304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16305 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
16306 1.38629 1.38629 1.38629 1.38629
|
|
16307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16308 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
16309 1.38629 1.38629 1.38629 1.38629
|
|
16310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16311 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
16312 1.38629 1.38629 1.38629 1.38629
|
|
16313 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16314 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
16315 1.38629 1.38629 1.38629 1.38629
|
|
16316 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16317 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
16318 1.38629 1.38629 1.38629 1.38629
|
|
16319 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16320 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
|
|
16321 1.38629 1.38629 1.38629 1.38629
|
|
16322 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16323 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
|
|
16324 1.38629 1.38629 1.38629 1.38629
|
|
16325 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16326 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
16327 1.38629 1.38629 1.38629 1.38629
|
|
16328 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16329 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
16330 1.38629 1.38629 1.38629 1.38629
|
|
16331 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16332 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
|
|
16333 1.38629 1.38629 1.38629 1.38629
|
|
16334 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16335 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
16336 1.38629 1.38629 1.38629 1.38629
|
|
16337 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16338 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
16339 1.38629 1.38629 1.38629 1.38629
|
|
16340 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16341 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
16342 1.38629 1.38629 1.38629 1.38629
|
|
16343 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16344 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
16345 1.38629 1.38629 1.38629 1.38629
|
|
16346 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16347 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
16348 1.38629 1.38629 1.38629 1.38629
|
|
16349 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16350 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
16351 1.38629 1.38629 1.38629 1.38629
|
|
16352 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16353 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
|
|
16354 1.38629 1.38629 1.38629 1.38629
|
|
16355 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16356 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
|
|
16357 1.38629 1.38629 1.38629 1.38629
|
|
16358 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16359 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
|
|
16360 1.38629 1.38629 1.38629 1.38629
|
|
16361 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16362 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
16363 1.38629 1.38629 1.38629 1.38629
|
|
16364 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16365 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
|
|
16366 1.38629 1.38629 1.38629 1.38629
|
|
16367 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16368 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
|
|
16369 1.38629 1.38629 1.38629 1.38629
|
|
16370 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16371 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
|
|
16372 1.38629 1.38629 1.38629 1.38629
|
|
16373 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16374 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
|
|
16375 1.38629 1.38629 1.38629 1.38629
|
|
16376 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16377 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
|
|
16378 1.38629 1.38629 1.38629 1.38629
|
|
16379 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16380 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
|
|
16381 1.38629 1.38629 1.38629 1.38629
|
|
16382 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16383 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
|
|
16384 1.38629 1.38629 1.38629 1.38629
|
|
16385 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16386 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
|
|
16387 1.38629 1.38629 1.38629 1.38629
|
|
16388 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16389 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
16390 1.38629 1.38629 1.38629 1.38629
|
|
16391 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16392 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
16393 1.38629 1.38629 1.38629 1.38629
|
|
16394 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16395 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
|
|
16396 1.38629 1.38629 1.38629 1.38629
|
|
16397 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16398 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
16399 1.38629 1.38629 1.38629 1.38629
|
|
16400 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16401 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
|
|
16402 1.38629 1.38629 1.38629 1.38629
|
|
16403 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16404 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
|
|
16405 1.38629 1.38629 1.38629 1.38629
|
|
16406 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16407 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
|
|
16408 1.38629 1.38629 1.38629 1.38629
|
|
16409 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16410 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
|
|
16411 1.38629 1.38629 1.38629 1.38629
|
|
16412 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16413 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
16414 1.38629 1.38629 1.38629 1.38629
|
|
16415 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16416 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
|
|
16417 1.38629 1.38629 1.38629 1.38629
|
|
16418 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16419 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
|
|
16420 1.38629 1.38629 1.38629 1.38629
|
|
16421 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16422 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
16423 1.38629 1.38629 1.38629 1.38629
|
|
16424 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16425 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
|
|
16426 1.38629 1.38629 1.38629 1.38629
|
|
16427 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16428 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
|
|
16429 1.38629 1.38629 1.38629 1.38629
|
|
16430 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16431 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
|
|
16432 1.38629 1.38629 1.38629 1.38629
|
|
16433 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16434 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
|
|
16435 1.38629 1.38629 1.38629 1.38629
|
|
16436 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16437 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
16438 1.38629 1.38629 1.38629 1.38629
|
|
16439 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16440 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
|
|
16441 1.38629 1.38629 1.38629 1.38629
|
|
16442 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
16443 //
|
|
16444 HMMER3/f [3.2.1 | June 2018]
|
|
16445 NAME long.69.aln
|
|
16446 LENG 95
|
|
16447 MAXL 195
|
|
16448 ALPH DNA
|
|
16449 RF no
|
|
16450 MM no
|
|
16451 CONS yes
|
|
16452 CS no
|
|
16453 MAP yes
|
|
16454 DATE Tue May 28 13:12:02 2019
|
|
16455 NSEQ 2
|
|
16456 EFFN 2.000000
|
|
16457 CKSUM 3693886677
|
|
16458 STATS LOCAL MSV -9.3349 0.73564
|
|
16459 STATS LOCAL VITERBI -11.4690 0.73564
|
|
16460 STATS LOCAL FORWARD -2.9050 0.73564
|
|
16461 HMM A C G T
|
|
16462 m->m m->i m->d i->m i->i d->m d->d
|
|
16463 COMPO 1.31992 1.50669 1.46715 1.27076
|
|
16464 1.38629 1.38629 1.38629 1.38629
|
|
16465 0.33647 3.73767 1.33977 1.46634 0.26236 0.00000 *
|
|
16466 1 1.97267 2.25870 0.46443 2.05625 1 g - - -
|
|
16467 1.38629 1.38629 1.38629 1.38629
|
|
16468 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16469 2 0.56139 2.08489 1.86185 1.89791 2 a - - -
|
|
16470 1.38629 1.38629 1.38629 1.38629
|
|
16471 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16472 3 0.56139 2.08489 1.86185 1.89791 3 a - - -
|
|
16473 1.38629 1.38629 1.38629 1.38629
|
|
16474 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16475 4 1.97267 2.25870 0.46443 2.05625 4 g - - -
|
|
16476 1.38629 1.38629 1.38629 1.38629
|
|
16477 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16478 5 1.98342 0.60779 2.04641 1.66785 5 c - - -
|
|
16479 1.38629 1.38629 1.38629 1.38629
|
|
16480 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16481 6 0.56139 2.08489 1.86185 1.89791 6 a - - -
|
|
16482 1.38629 1.38629 1.38629 1.38629
|
|
16483 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16484 7 1.97267 2.25870 0.46443 2.05625 7 g - - -
|
|
16485 1.38629 1.38629 1.38629 1.38629
|
|
16486 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16487 8 0.56139 2.08489 1.86185 1.89791 8 a - - -
|
|
16488 1.38629 1.38629 1.38629 1.38629
|
|
16489 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16490 9 1.97267 2.25870 0.46443 2.05625 9 g - - -
|
|
16491 1.38629 1.38629 1.38629 1.38629
|
|
16492 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16493 10 1.98342 0.60779 2.04641 1.66785 10 c - - -
|
|
16494 1.38629 1.38629 1.38629 1.38629
|
|
16495 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16496 11 1.91091 1.78233 1.95844 0.61114 11 t - - -
|
|
16497 1.38629 1.38629 1.38629 1.38629
|
|
16498 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16499 12 0.56139 2.08489 1.86185 1.89791 12 a - - -
|
|
16500 1.38629 1.38629 1.38629 1.38629
|
|
16501 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16502 13 1.97267 2.25870 0.46443 2.05625 13 g - - -
|
|
16503 1.38629 1.38629 1.38629 1.38629
|
|
16504 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16505 14 0.56139 2.08489 1.86185 1.89791 14 a - - -
|
|
16506 1.38629 1.38629 1.38629 1.38629
|
|
16507 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16508 15 0.56139 2.08489 1.86185 1.89791 15 a - - -
|
|
16509 1.38629 1.38629 1.38629 1.38629
|
|
16510 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16511 16 1.98342 0.60779 2.04641 1.66785 16 c - - -
|
|
16512 1.38629 1.38629 1.38629 1.38629
|
|
16513 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16514 17 1.91091 1.78233 1.95844 0.61114 17 t - - -
|
|
16515 1.38629 1.38629 1.38629 1.38629
|
|
16516 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16517 18 1.97267 2.25870 0.46443 2.05625 18 g - - -
|
|
16518 1.38629 1.38629 1.38629 1.38629
|
|
16519 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16520 19 1.97267 2.25870 0.46443 2.05625 19 g - - -
|
|
16521 1.38629 1.38629 1.38629 1.38629
|
|
16522 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16523 20 1.98342 0.60779 2.04641 1.66785 20 c - - -
|
|
16524 1.38629 1.38629 1.38629 1.38629
|
|
16525 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16526 21 0.56139 2.08489 1.86185 1.89791 21 a - - -
|
|
16527 1.38629 1.38629 1.38629 1.38629
|
|
16528 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16529 22 1.97267 2.25870 0.46443 2.05625 22 g - - -
|
|
16530 1.38629 1.38629 1.38629 1.38629
|
|
16531 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16532 23 0.56139 2.08489 1.86185 1.89791 23 a - - -
|
|
16533 1.38629 1.38629 1.38629 1.38629
|
|
16534 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16535 24 0.56139 2.08489 1.86185 1.89791 24 a - - -
|
|
16536 1.38629 1.38629 1.38629 1.38629
|
|
16537 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16538 25 0.56139 2.08489 1.86185 1.89791 25 a - - -
|
|
16539 1.38629 1.38629 1.38629 1.38629
|
|
16540 0.06454 3.46574 3.46574 1.46634 0.26236 0.51083 0.91629
|
|
16541 26 1.09289 1.89038 1.88803 1.01509 26 t - - -
|
|
16542 1.38629 1.38629 1.38629 1.38629
|
|
16543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16544 27 2.01896 1.01168 2.12953 0.95527 27 t - - -
|
|
16545 1.38629 1.38629 1.38629 1.38629
|
|
16546 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16547 28 1.09289 1.89038 1.88803 1.01509 28 t - - -
|
|
16548 1.38629 1.38629 1.38629 1.38629
|
|
16549 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16550 29 1.84050 1.95342 1.03654 1.06480 29 g - - -
|
|
16551 1.38629 1.38629 1.38629 1.38629
|
|
16552 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16553 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
|
|
16554 1.38629 1.38629 1.38629 1.38629
|
|
16555 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16556 31 1.84050 1.95342 1.03654 1.06480 31 g - - -
|
|
16557 1.38629 1.38629 1.38629 1.38629
|
|
16558 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16559 32 1.12273 2.17004 0.88086 1.92408 32 g - - -
|
|
16560 1.38629 1.38629 1.38629 1.38629
|
|
16561 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16562 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
|
|
16563 1.38629 1.38629 1.38629 1.38629
|
|
16564 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16565 34 1.09289 1.89038 1.88803 1.01509 34 t - - -
|
|
16566 1.38629 1.38629 1.38629 1.38629
|
|
16567 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16568 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
16569 1.38629 1.38629 1.38629 1.38629
|
|
16570 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16571 36 2.01896 1.01168 2.12953 0.95527 36 t - - -
|
|
16572 1.38629 1.38629 1.38629 1.38629
|
|
16573 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16574 37 1.08498 1.08670 1.94700 1.70340 37 a - - -
|
|
16575 1.38629 1.38629 1.38629 1.38629
|
|
16576 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16577 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
16578 1.38629 1.38629 1.38629 1.38629
|
|
16579 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16580 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
|
|
16581 1.38629 1.38629 1.38629 1.38629
|
|
16582 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16583 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
16584 1.38629 1.38629 1.38629 1.38629
|
|
16585 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16586 41 1.09289 1.89038 1.88803 1.01509 41 t - - -
|
|
16587 1.38629 1.38629 1.38629 1.38629
|
|
16588 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16589 42 1.08498 1.08670 1.94700 1.70340 42 a - - -
|
|
16590 1.38629 1.38629 1.38629 1.38629
|
|
16591 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16592 43 2.01896 1.01168 2.12953 0.95527 43 t - - -
|
|
16593 1.38629 1.38629 1.38629 1.38629
|
|
16594 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16595 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
|
|
16596 1.38629 1.38629 1.38629 1.38629
|
|
16597 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16598 45 1.08498 1.08670 1.94700 1.70340 45 a - - -
|
|
16599 1.38629 1.38629 1.38629 1.38629
|
|
16600 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16601 46 2.01896 1.01168 2.12953 0.95527 46 t - - -
|
|
16602 1.38629 1.38629 1.38629 1.38629
|
|
16603 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16604 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
|
|
16605 1.38629 1.38629 1.38629 1.38629
|
|
16606 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16607 48 1.08498 1.08670 1.94700 1.70340 48 a - - -
|
|
16608 1.38629 1.38629 1.38629 1.38629
|
|
16609 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16610 49 1.12273 2.17004 0.88086 1.92408 49 g - - -
|
|
16611 1.38629 1.38629 1.38629 1.38629
|
|
16612 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16613 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
16614 1.38629 1.38629 1.38629 1.38629
|
|
16615 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16616 51 1.12273 2.17004 0.88086 1.92408 51 g - - -
|
|
16617 1.38629 1.38629 1.38629 1.38629
|
|
16618 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16619 52 2.01896 1.01168 2.12953 0.95527 52 t - - -
|
|
16620 1.38629 1.38629 1.38629 1.38629
|
|
16621 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16622 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
16623 1.38629 1.38629 1.38629 1.38629
|
|
16624 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16625 54 2.01896 1.01168 2.12953 0.95527 54 t - - -
|
|
16626 1.38629 1.38629 1.38629 1.38629
|
|
16627 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16628 55 1.84050 1.95342 1.03654 1.06480 55 g - - -
|
|
16629 1.38629 1.38629 1.38629 1.38629
|
|
16630 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16631 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
|
|
16632 1.38629 1.38629 1.38629 1.38629
|
|
16633 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16634 57 1.12273 2.17004 0.88086 1.92408 57 g - - -
|
|
16635 1.38629 1.38629 1.38629 1.38629
|
|
16636 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16637 58 1.84050 1.95342 1.03654 1.06480 58 g - - -
|
|
16638 1.38629 1.38629 1.38629 1.38629
|
|
16639 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16640 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
|
|
16641 1.38629 1.38629 1.38629 1.38629
|
|
16642 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16643 60 1.88401 1.14290 1.03416 1.75097 60 g - - -
|
|
16644 1.38629 1.38629 1.38629 1.38629
|
|
16645 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16646 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
16647 1.38629 1.38629 1.38629 1.38629
|
|
16648 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16649 62 1.09289 1.89038 1.88803 1.01509 62 t - - -
|
|
16650 1.38629 1.38629 1.38629 1.38629
|
|
16651 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16652 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
|
|
16653 1.38629 1.38629 1.38629 1.38629
|
|
16654 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16655 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
16656 1.38629 1.38629 1.38629 1.38629
|
|
16657 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16658 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
16659 1.38629 1.38629 1.38629 1.38629
|
|
16660 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16661 66 1.84050 1.95342 1.03654 1.06480 66 g - - -
|
|
16662 1.38629 1.38629 1.38629 1.38629
|
|
16663 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16664 67 1.12273 2.17004 0.88086 1.92408 67 g - - -
|
|
16665 1.38629 1.38629 1.38629 1.38629
|
|
16666 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16667 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
|
|
16668 1.38629 1.38629 1.38629 1.38629
|
|
16669 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16670 69 2.01896 1.01168 2.12953 0.95527 69 t - - -
|
|
16671 1.38629 1.38629 1.38629 1.38629
|
|
16672 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16673 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
|
|
16674 1.38629 1.38629 1.38629 1.38629
|
|
16675 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547
|
|
16676 71 1.91091 1.78233 1.95844 0.61114 71 t - - -
|
|
16677 1.38629 1.38629 1.38629 1.38629
|
|
16678 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16679 72 1.98342 0.60779 2.04641 1.66785 72 c - - -
|
|
16680 1.38629 1.38629 1.38629 1.38629
|
|
16681 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16682 73 1.91091 1.78233 1.95844 0.61114 73 t - - -
|
|
16683 1.38629 1.38629 1.38629 1.38629
|
|
16684 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16685 74 1.98342 0.60779 2.04641 1.66785 74 c - - -
|
|
16686 1.38629 1.38629 1.38629 1.38629
|
|
16687 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16688 75 0.56139 2.08489 1.86185 1.89791 75 a - - -
|
|
16689 1.38629 1.38629 1.38629 1.38629
|
|
16690 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16691 76 1.91091 1.78233 1.95844 0.61114 76 t - - -
|
|
16692 1.38629 1.38629 1.38629 1.38629
|
|
16693 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16694 77 1.91091 1.78233 1.95844 0.61114 77 t - - -
|
|
16695 1.38629 1.38629 1.38629 1.38629
|
|
16696 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16697 78 1.91091 1.78233 1.95844 0.61114 78 t - - -
|
|
16698 1.38629 1.38629 1.38629 1.38629
|
|
16699 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16700 79 1.91091 1.78233 1.95844 0.61114 79 t - - -
|
|
16701 1.38629 1.38629 1.38629 1.38629
|
|
16702 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16703 80 1.91091 1.78233 1.95844 0.61114 80 t - - -
|
|
16704 1.38629 1.38629 1.38629 1.38629
|
|
16705 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16706 81 1.98342 0.60779 2.04641 1.66785 81 c - - -
|
|
16707 1.38629 1.38629 1.38629 1.38629
|
|
16708 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16709 82 1.91091 1.78233 1.95844 0.61114 82 t - - -
|
|
16710 1.38629 1.38629 1.38629 1.38629
|
|
16711 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16712 83 1.97267 2.25870 0.46443 2.05625 83 g - - -
|
|
16713 1.38629 1.38629 1.38629 1.38629
|
|
16714 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16715 84 1.98342 0.60779 2.04641 1.66785 84 c - - -
|
|
16716 1.38629 1.38629 1.38629 1.38629
|
|
16717 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16718 85 1.98342 0.60779 2.04641 1.66785 85 c - - -
|
|
16719 1.38629 1.38629 1.38629 1.38629
|
|
16720 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16721 86 1.98342 0.60779 2.04641 1.66785 86 c - - -
|
|
16722 1.38629 1.38629 1.38629 1.38629
|
|
16723 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16724 87 1.97267 2.25870 0.46443 2.05625 87 g - - -
|
|
16725 1.38629 1.38629 1.38629 1.38629
|
|
16726 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16727 88 1.91091 1.78233 1.95844 0.61114 88 t - - -
|
|
16728 1.38629 1.38629 1.38629 1.38629
|
|
16729 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16730 89 1.91091 1.78233 1.95844 0.61114 89 t - - -
|
|
16731 1.38629 1.38629 1.38629 1.38629
|
|
16732 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16733 90 1.98342 0.60779 2.04641 1.66785 90 c - - -
|
|
16734 1.38629 1.38629 1.38629 1.38629
|
|
16735 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16736 91 1.91091 1.78233 1.95844 0.61114 91 t - - -
|
|
16737 1.38629 1.38629 1.38629 1.38629
|
|
16738 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16739 92 0.56139 2.08489 1.86185 1.89791 92 a - - -
|
|
16740 1.38629 1.38629 1.38629 1.38629
|
|
16741 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16742 93 1.97267 2.25870 0.46443 2.05625 93 g - - -
|
|
16743 1.38629 1.38629 1.38629 1.38629
|
|
16744 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16745 94 1.98342 0.60779 2.04641 1.66785 94 c - - -
|
|
16746 1.38629 1.38629 1.38629 1.38629
|
|
16747 0.06454 3.46574 3.46574 1.46634 0.26236 1.60944 0.22314
|
|
16748 95 1.91091 1.78233 1.95844 0.61114 95 t - - -
|
|
16749 1.38629 1.38629 1.38629 1.38629
|
|
16750 0.03279 3.43399 * 1.46634 0.26236 0.00000 *
|
|
16751 //
|
|
16752 HMMER3/f [3.2.1 | June 2018]
|
|
16753 NAME long.70.aln
|
|
16754 LENG 70
|
|
16755 MAXL 160
|
|
16756 ALPH DNA
|
|
16757 RF no
|
|
16758 MM no
|
|
16759 CONS yes
|
|
16760 CS no
|
|
16761 MAP yes
|
|
16762 DATE Tue May 28 13:12:02 2019
|
|
16763 NSEQ 2
|
|
16764 EFFN 2.000000
|
|
16765 CKSUM 2654244890
|
|
16766 STATS LOCAL MSV -8.3785 0.72268
|
|
16767 STATS LOCAL VITERBI -9.4571 0.72268
|
|
16768 STATS LOCAL FORWARD -3.4371 0.72268
|
|
16769 HMM A C G T
|
|
16770 m->m m->i m->d i->m i->i d->m d->d
|
|
16771 COMPO 1.52355 1.21479 1.93188 1.07759
|
|
16772 1.38629 1.38629 1.38629 1.38629
|
|
16773 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
16774 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
|
|
16775 1.38629 1.38629 1.38629 1.38629
|
|
16776 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16777 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
|
|
16778 1.38629 1.38629 1.38629 1.38629
|
|
16779 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16780 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
|
|
16781 1.38629 1.38629 1.38629 1.38629
|
|
16782 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16783 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
|
|
16784 1.38629 1.38629 1.38629 1.38629
|
|
16785 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16786 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
16787 1.38629 1.38629 1.38629 1.38629
|
|
16788 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16789 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
16790 1.38629 1.38629 1.38629 1.38629
|
|
16791 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16792 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
|
|
16793 1.38629 1.38629 1.38629 1.38629
|
|
16794 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16795 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
16796 1.38629 1.38629 1.38629 1.38629
|
|
16797 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16798 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
|
|
16799 1.38629 1.38629 1.38629 1.38629
|
|
16800 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16801 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
|
|
16802 1.38629 1.38629 1.38629 1.38629
|
|
16803 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16804 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
16805 1.38629 1.38629 1.38629 1.38629
|
|
16806 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16807 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
|
|
16808 1.38629 1.38629 1.38629 1.38629
|
|
16809 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16810 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
16811 1.38629 1.38629 1.38629 1.38629
|
|
16812 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16813 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
|
|
16814 1.38629 1.38629 1.38629 1.38629
|
|
16815 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16816 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
|
|
16817 1.38629 1.38629 1.38629 1.38629
|
|
16818 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16819 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
|
|
16820 1.38629 1.38629 1.38629 1.38629
|
|
16821 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16822 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
16823 1.38629 1.38629 1.38629 1.38629
|
|
16824 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16825 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
|
|
16826 1.38629 1.38629 1.38629 1.38629
|
|
16827 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16828 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
|
|
16829 1.38629 1.38629 1.38629 1.38629
|
|
16830 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16831 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
|
|
16832 1.38629 1.38629 1.38629 1.38629
|
|
16833 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16834 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
|
|
16835 1.38629 1.38629 1.38629 1.38629
|
|
16836 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16837 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
|
|
16838 1.38629 1.38629 1.38629 1.38629
|
|
16839 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16840 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
16841 1.38629 1.38629 1.38629 1.38629
|
|
16842 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16843 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
|
|
16844 1.38629 1.38629 1.38629 1.38629
|
|
16845 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16846 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
|
|
16847 1.38629 1.38629 1.38629 1.38629
|
|
16848 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16849 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
|
|
16850 1.38629 1.38629 1.38629 1.38629
|
|
16851 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16852 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
|
|
16853 1.38629 1.38629 1.38629 1.38629
|
|
16854 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16855 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
16856 1.38629 1.38629 1.38629 1.38629
|
|
16857 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16858 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
|
|
16859 1.38629 1.38629 1.38629 1.38629
|
|
16860 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16861 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
|
|
16862 1.38629 1.38629 1.38629 1.38629
|
|
16863 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16864 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
|
|
16865 1.38629 1.38629 1.38629 1.38629
|
|
16866 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16867 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
|
|
16868 1.38629 1.38629 1.38629 1.38629
|
|
16869 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16870 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
|
|
16871 1.38629 1.38629 1.38629 1.38629
|
|
16872 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16873 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
|
|
16874 1.38629 1.38629 1.38629 1.38629
|
|
16875 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16876 35 0.28818 2.60848 2.42319 2.42940 35 a - - -
|
|
16877 1.38629 1.38629 1.38629 1.38629
|
|
16878 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16879 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
|
|
16880 1.38629 1.38629 1.38629 1.38629
|
|
16881 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16882 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
16883 1.38629 1.38629 1.38629 1.38629
|
|
16884 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16885 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
16886 1.38629 1.38629 1.38629 1.38629
|
|
16887 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16888 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
16889 1.38629 1.38629 1.38629 1.38629
|
|
16890 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16891 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
16892 1.38629 1.38629 1.38629 1.38629
|
|
16893 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16894 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
16895 1.38629 1.38629 1.38629 1.38629
|
|
16896 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16897 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
|
|
16898 1.38629 1.38629 1.38629 1.38629
|
|
16899 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16900 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
|
|
16901 1.38629 1.38629 1.38629 1.38629
|
|
16902 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16903 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
|
|
16904 1.38629 1.38629 1.38629 1.38629
|
|
16905 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16906 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
|
|
16907 1.38629 1.38629 1.38629 1.38629
|
|
16908 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16909 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
|
|
16910 1.38629 1.38629 1.38629 1.38629
|
|
16911 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16912 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
|
|
16913 1.38629 1.38629 1.38629 1.38629
|
|
16914 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16915 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
|
|
16916 1.38629 1.38629 1.38629 1.38629
|
|
16917 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16918 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
|
|
16919 1.38629 1.38629 1.38629 1.38629
|
|
16920 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16921 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
|
|
16922 1.38629 1.38629 1.38629 1.38629
|
|
16923 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16924 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
16925 1.38629 1.38629 1.38629 1.38629
|
|
16926 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16927 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
|
|
16928 1.38629 1.38629 1.38629 1.38629
|
|
16929 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16930 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
|
|
16931 1.38629 1.38629 1.38629 1.38629
|
|
16932 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16933 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
16934 1.38629 1.38629 1.38629 1.38629
|
|
16935 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16936 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
16937 1.38629 1.38629 1.38629 1.38629
|
|
16938 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16939 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
16940 1.38629 1.38629 1.38629 1.38629
|
|
16941 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16942 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
|
|
16943 1.38629 1.38629 1.38629 1.38629
|
|
16944 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16945 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
|
|
16946 1.38629 1.38629 1.38629 1.38629
|
|
16947 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16948 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
|
|
16949 1.38629 1.38629 1.38629 1.38629
|
|
16950 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16951 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
|
|
16952 1.38629 1.38629 1.38629 1.38629
|
|
16953 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16954 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
|
|
16955 1.38629 1.38629 1.38629 1.38629
|
|
16956 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16957 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
|
|
16958 1.38629 1.38629 1.38629 1.38629
|
|
16959 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16960 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
|
|
16961 1.38629 1.38629 1.38629 1.38629
|
|
16962 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16963 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
16964 1.38629 1.38629 1.38629 1.38629
|
|
16965 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16966 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
|
|
16967 1.38629 1.38629 1.38629 1.38629
|
|
16968 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16969 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
16970 1.38629 1.38629 1.38629 1.38629
|
|
16971 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16972 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
16973 1.38629 1.38629 1.38629 1.38629
|
|
16974 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16975 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
|
|
16976 1.38629 1.38629 1.38629 1.38629
|
|
16977 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16978 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
16979 1.38629 1.38629 1.38629 1.38629
|
|
16980 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
16981 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
|
|
16982 1.38629 1.38629 1.38629 1.38629
|
|
16983 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
16984 //
|
|
16985 HMMER3/f [3.2.1 | June 2018]
|
|
16986 NAME long.71.aln
|
|
16987 LENG 70
|
|
16988 MAXL 160
|
|
16989 ALPH DNA
|
|
16990 RF no
|
|
16991 MM no
|
|
16992 CONS yes
|
|
16993 CS no
|
|
16994 MAP yes
|
|
16995 DATE Tue May 28 13:12:02 2019
|
|
16996 NSEQ 2
|
|
16997 EFFN 2.000000
|
|
16998 CKSUM 1009151711
|
|
16999 STATS LOCAL MSV -7.9784 0.71983
|
|
17000 STATS LOCAL VITERBI -9.2979 0.71983
|
|
17001 STATS LOCAL FORWARD -3.3519 0.71983
|
|
17002 HMM A C G T
|
|
17003 m->m m->i m->d i->m i->i d->m d->d
|
|
17004 COMPO 1.08868 1.68568 1.30434 1.57664
|
|
17005 1.38629 1.38629 1.38629 1.38629
|
|
17006 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
17007 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
17008 1.38629 1.38629 1.38629 1.38629
|
|
17009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17010 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
|
|
17011 1.38629 1.38629 1.38629 1.38629
|
|
17012 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17013 3 2.38910 2.82844 0.25233 2.62837 3 g - - -
|
|
17014 1.38629 1.38629 1.38629 1.38629
|
|
17015 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17016 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
|
|
17017 1.38629 1.38629 1.38629 1.38629
|
|
17018 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17019 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
17020 1.38629 1.38629 1.38629 1.38629
|
|
17021 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17022 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
|
|
17023 1.38629 1.38629 1.38629 1.38629
|
|
17024 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17025 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
|
|
17026 1.38629 1.38629 1.38629 1.38629
|
|
17027 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17028 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
|
|
17029 1.38629 1.38629 1.38629 1.38629
|
|
17030 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17031 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
17032 1.38629 1.38629 1.38629 1.38629
|
|
17033 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17034 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
17035 1.38629 1.38629 1.38629 1.38629
|
|
17036 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17037 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
|
|
17038 1.38629 1.38629 1.38629 1.38629
|
|
17039 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17040 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
|
|
17041 1.38629 1.38629 1.38629 1.38629
|
|
17042 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17043 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
|
|
17044 1.38629 1.38629 1.38629 1.38629
|
|
17045 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17046 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
|
|
17047 1.38629 1.38629 1.38629 1.38629
|
|
17048 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17049 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
17050 1.38629 1.38629 1.38629 1.38629
|
|
17051 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17052 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
|
|
17053 1.38629 1.38629 1.38629 1.38629
|
|
17054 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17055 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
17056 1.38629 1.38629 1.38629 1.38629
|
|
17057 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17058 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
17059 1.38629 1.38629 1.38629 1.38629
|
|
17060 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17061 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
|
|
17062 1.38629 1.38629 1.38629 1.38629
|
|
17063 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17064 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
|
|
17065 1.38629 1.38629 1.38629 1.38629
|
|
17066 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17067 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
|
|
17068 1.38629 1.38629 1.38629 1.38629
|
|
17069 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17070 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
|
|
17071 1.38629 1.38629 1.38629 1.38629
|
|
17072 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17073 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
17074 1.38629 1.38629 1.38629 1.38629
|
|
17075 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17076 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
17077 1.38629 1.38629 1.38629 1.38629
|
|
17078 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17079 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
|
|
17080 1.38629 1.38629 1.38629 1.38629
|
|
17081 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17082 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
17083 1.38629 1.38629 1.38629 1.38629
|
|
17084 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17085 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
|
|
17086 1.38629 1.38629 1.38629 1.38629
|
|
17087 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17088 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
17089 1.38629 1.38629 1.38629 1.38629
|
|
17090 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17091 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
|
|
17092 1.38629 1.38629 1.38629 1.38629
|
|
17093 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17094 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
|
|
17095 1.38629 1.38629 1.38629 1.38629
|
|
17096 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17097 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
|
|
17098 1.38629 1.38629 1.38629 1.38629
|
|
17099 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17100 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
17101 1.38629 1.38629 1.38629 1.38629
|
|
17102 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17103 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
|
|
17104 1.38629 1.38629 1.38629 1.38629
|
|
17105 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17106 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
17107 1.38629 1.38629 1.38629 1.38629
|
|
17108 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17109 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
17110 1.38629 1.38629 1.38629 1.38629
|
|
17111 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17112 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
|
|
17113 1.38629 1.38629 1.38629 1.38629
|
|
17114 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17115 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
17116 1.38629 1.38629 1.38629 1.38629
|
|
17117 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17118 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
|
|
17119 1.38629 1.38629 1.38629 1.38629
|
|
17120 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17121 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
|
|
17122 1.38629 1.38629 1.38629 1.38629
|
|
17123 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17124 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
|
|
17125 1.38629 1.38629 1.38629 1.38629
|
|
17126 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17127 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
|
|
17128 1.38629 1.38629 1.38629 1.38629
|
|
17129 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17130 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
|
|
17131 1.38629 1.38629 1.38629 1.38629
|
|
17132 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17133 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
17134 1.38629 1.38629 1.38629 1.38629
|
|
17135 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17136 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
|
|
17137 1.38629 1.38629 1.38629 1.38629
|
|
17138 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17139 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
17140 1.38629 1.38629 1.38629 1.38629
|
|
17141 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17142 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
|
|
17143 1.38629 1.38629 1.38629 1.38629
|
|
17144 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17145 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
|
|
17146 1.38629 1.38629 1.38629 1.38629
|
|
17147 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17148 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
|
|
17149 1.38629 1.38629 1.38629 1.38629
|
|
17150 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17151 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
|
|
17152 1.38629 1.38629 1.38629 1.38629
|
|
17153 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17154 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
|
|
17155 1.38629 1.38629 1.38629 1.38629
|
|
17156 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17157 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
17158 1.38629 1.38629 1.38629 1.38629
|
|
17159 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17160 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
|
|
17161 1.38629 1.38629 1.38629 1.38629
|
|
17162 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17163 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
17164 1.38629 1.38629 1.38629 1.38629
|
|
17165 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17166 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
|
|
17167 1.38629 1.38629 1.38629 1.38629
|
|
17168 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17169 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
17170 1.38629 1.38629 1.38629 1.38629
|
|
17171 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17172 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
|
|
17173 1.38629 1.38629 1.38629 1.38629
|
|
17174 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17175 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
|
|
17176 1.38629 1.38629 1.38629 1.38629
|
|
17177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17178 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
|
|
17179 1.38629 1.38629 1.38629 1.38629
|
|
17180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17181 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
17182 1.38629 1.38629 1.38629 1.38629
|
|
17183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17184 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
|
|
17185 1.38629 1.38629 1.38629 1.38629
|
|
17186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17187 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
17188 1.38629 1.38629 1.38629 1.38629
|
|
17189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17190 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
17191 1.38629 1.38629 1.38629 1.38629
|
|
17192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17193 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
17194 1.38629 1.38629 1.38629 1.38629
|
|
17195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17196 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
17197 1.38629 1.38629 1.38629 1.38629
|
|
17198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17199 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
|
|
17200 1.38629 1.38629 1.38629 1.38629
|
|
17201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17202 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
|
|
17203 1.38629 1.38629 1.38629 1.38629
|
|
17204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17205 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
|
|
17206 1.38629 1.38629 1.38629 1.38629
|
|
17207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17208 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
|
|
17209 1.38629 1.38629 1.38629 1.38629
|
|
17210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17211 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
|
|
17212 1.38629 1.38629 1.38629 1.38629
|
|
17213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17214 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
|
|
17215 1.38629 1.38629 1.38629 1.38629
|
|
17216 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
17217 //
|
|
17218 HMMER3/f [3.2.1 | June 2018]
|
|
17219 NAME long.72.aln
|
|
17220 LENG 70
|
|
17221 MAXL 160
|
|
17222 ALPH DNA
|
|
17223 RF no
|
|
17224 MM no
|
|
17225 CONS yes
|
|
17226 CS no
|
|
17227 MAP yes
|
|
17228 DATE Tue May 28 13:12:02 2019
|
|
17229 NSEQ 2
|
|
17230 EFFN 2.000000
|
|
17231 CKSUM 295818489
|
|
17232 STATS LOCAL MSV -8.1681 0.72138
|
|
17233 STATS LOCAL VITERBI -9.1523 0.72138
|
|
17234 STATS LOCAL FORWARD -3.6764 0.72138
|
|
17235 HMM A C G T
|
|
17236 m->m m->i m->d i->m i->i d->m d->d
|
|
17237 COMPO 1.48326 1.48268 1.44801 1.16784
|
|
17238 1.38629 1.38629 1.38629 1.38629
|
|
17239 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
17240 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
17241 1.38629 1.38629 1.38629 1.38629
|
|
17242 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17243 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
|
|
17244 1.38629 1.38629 1.38629 1.38629
|
|
17245 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17246 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
|
|
17247 1.38629 1.38629 1.38629 1.38629
|
|
17248 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17249 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
|
|
17250 1.38629 1.38629 1.38629 1.38629
|
|
17251 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17252 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
|
|
17253 1.38629 1.38629 1.38629 1.38629
|
|
17254 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17255 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
|
|
17256 1.38629 1.38629 1.38629 1.38629
|
|
17257 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17258 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
17259 1.38629 1.38629 1.38629 1.38629
|
|
17260 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17261 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
|
|
17262 1.38629 1.38629 1.38629 1.38629
|
|
17263 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17264 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
|
|
17265 1.38629 1.38629 1.38629 1.38629
|
|
17266 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17267 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
|
|
17268 1.38629 1.38629 1.38629 1.38629
|
|
17269 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17270 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
|
|
17271 1.38629 1.38629 1.38629 1.38629
|
|
17272 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17273 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
|
|
17274 1.38629 1.38629 1.38629 1.38629
|
|
17275 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17276 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
|
|
17277 1.38629 1.38629 1.38629 1.38629
|
|
17278 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17279 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
17280 1.38629 1.38629 1.38629 1.38629
|
|
17281 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17282 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
17283 1.38629 1.38629 1.38629 1.38629
|
|
17284 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17285 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
17286 1.38629 1.38629 1.38629 1.38629
|
|
17287 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17288 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
17289 1.38629 1.38629 1.38629 1.38629
|
|
17290 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17291 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
|
|
17292 1.38629 1.38629 1.38629 1.38629
|
|
17293 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17294 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
|
|
17295 1.38629 1.38629 1.38629 1.38629
|
|
17296 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17297 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
|
|
17298 1.38629 1.38629 1.38629 1.38629
|
|
17299 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17300 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
|
|
17301 1.38629 1.38629 1.38629 1.38629
|
|
17302 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17303 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
|
|
17304 1.38629 1.38629 1.38629 1.38629
|
|
17305 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17306 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
|
|
17307 1.38629 1.38629 1.38629 1.38629
|
|
17308 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17309 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
|
|
17310 1.38629 1.38629 1.38629 1.38629
|
|
17311 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17312 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
|
|
17313 1.38629 1.38629 1.38629 1.38629
|
|
17314 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17315 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
17316 1.38629 1.38629 1.38629 1.38629
|
|
17317 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17318 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
17319 1.38629 1.38629 1.38629 1.38629
|
|
17320 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17321 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
|
|
17322 1.38629 1.38629 1.38629 1.38629
|
|
17323 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17324 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
|
|
17325 1.38629 1.38629 1.38629 1.38629
|
|
17326 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17327 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
|
|
17328 1.38629 1.38629 1.38629 1.38629
|
|
17329 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17330 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
|
|
17331 1.38629 1.38629 1.38629 1.38629
|
|
17332 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17333 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
|
|
17334 1.38629 1.38629 1.38629 1.38629
|
|
17335 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17336 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
17337 1.38629 1.38629 1.38629 1.38629
|
|
17338 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17339 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
17340 1.38629 1.38629 1.38629 1.38629
|
|
17341 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17342 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
|
|
17343 1.38629 1.38629 1.38629 1.38629
|
|
17344 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17345 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
17346 1.38629 1.38629 1.38629 1.38629
|
|
17347 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17348 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
|
|
17349 1.38629 1.38629 1.38629 1.38629
|
|
17350 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17351 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
17352 1.38629 1.38629 1.38629 1.38629
|
|
17353 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17354 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
17355 1.38629 1.38629 1.38629 1.38629
|
|
17356 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17357 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
17358 1.38629 1.38629 1.38629 1.38629
|
|
17359 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17360 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
17361 1.38629 1.38629 1.38629 1.38629
|
|
17362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17363 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
|
|
17364 1.38629 1.38629 1.38629 1.38629
|
|
17365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17366 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
17367 1.38629 1.38629 1.38629 1.38629
|
|
17368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17369 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
|
|
17370 1.38629 1.38629 1.38629 1.38629
|
|
17371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17372 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
|
|
17373 1.38629 1.38629 1.38629 1.38629
|
|
17374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17375 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
|
|
17376 1.38629 1.38629 1.38629 1.38629
|
|
17377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17378 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
|
|
17379 1.38629 1.38629 1.38629 1.38629
|
|
17380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17381 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
|
|
17382 1.38629 1.38629 1.38629 1.38629
|
|
17383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17384 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
|
|
17385 1.38629 1.38629 1.38629 1.38629
|
|
17386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17387 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
17388 1.38629 1.38629 1.38629 1.38629
|
|
17389 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17390 51 2.38910 2.82844 0.25233 2.62837 51 g - - -
|
|
17391 1.38629 1.38629 1.38629 1.38629
|
|
17392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17393 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
|
|
17394 1.38629 1.38629 1.38629 1.38629
|
|
17395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17396 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
|
|
17397 1.38629 1.38629 1.38629 1.38629
|
|
17398 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17399 54 2.38910 2.82844 0.25233 2.62837 54 g - - -
|
|
17400 1.38629 1.38629 1.38629 1.38629
|
|
17401 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17402 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
|
|
17403 1.38629 1.38629 1.38629 1.38629
|
|
17404 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17405 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
17406 1.38629 1.38629 1.38629 1.38629
|
|
17407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17408 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
|
|
17409 1.38629 1.38629 1.38629 1.38629
|
|
17410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17411 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
|
|
17412 1.38629 1.38629 1.38629 1.38629
|
|
17413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17414 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
|
|
17415 1.38629 1.38629 1.38629 1.38629
|
|
17416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17417 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
|
|
17418 1.38629 1.38629 1.38629 1.38629
|
|
17419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17420 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
|
|
17421 1.38629 1.38629 1.38629 1.38629
|
|
17422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17423 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
|
|
17424 1.38629 1.38629 1.38629 1.38629
|
|
17425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17426 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
17427 1.38629 1.38629 1.38629 1.38629
|
|
17428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17429 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
17430 1.38629 1.38629 1.38629 1.38629
|
|
17431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17432 65 0.28818 2.60848 2.42319 2.42940 65 a - - -
|
|
17433 1.38629 1.38629 1.38629 1.38629
|
|
17434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17435 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
17436 1.38629 1.38629 1.38629 1.38629
|
|
17437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17438 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
|
|
17439 1.38629 1.38629 1.38629 1.38629
|
|
17440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17441 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
|
|
17442 1.38629 1.38629 1.38629 1.38629
|
|
17443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17444 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
|
|
17445 1.38629 1.38629 1.38629 1.38629
|
|
17446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17447 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
|
|
17448 1.38629 1.38629 1.38629 1.38629
|
|
17449 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
17450 //
|
|
17451 HMMER3/f [3.2.1 | June 2018]
|
|
17452 NAME long.73.aln
|
|
17453 LENG 70
|
|
17454 MAXL 160
|
|
17455 ALPH DNA
|
|
17456 RF no
|
|
17457 MM no
|
|
17458 CONS yes
|
|
17459 CS no
|
|
17460 MAP yes
|
|
17461 DATE Tue May 28 13:12:02 2019
|
|
17462 NSEQ 2
|
|
17463 EFFN 2.000000
|
|
17464 CKSUM 1304963515
|
|
17465 STATS LOCAL MSV -7.9514 0.72069
|
|
17466 STATS LOCAL VITERBI -9.1535 0.72069
|
|
17467 STATS LOCAL FORWARD -3.8888 0.72069
|
|
17468 HMM A C G T
|
|
17469 m->m m->i m->d i->m i->i d->m d->d
|
|
17470 COMPO 1.44728 1.46664 1.30757 1.33327
|
|
17471 1.38629 1.38629 1.38629 1.38629
|
|
17472 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
17473 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
|
|
17474 1.38629 1.38629 1.38629 1.38629
|
|
17475 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17476 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
|
|
17477 1.38629 1.38629 1.38629 1.38629
|
|
17478 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17479 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
|
|
17480 1.38629 1.38629 1.38629 1.38629
|
|
17481 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17482 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
|
|
17483 1.38629 1.38629 1.38629 1.38629
|
|
17484 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17485 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
17486 1.38629 1.38629 1.38629 1.38629
|
|
17487 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17488 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
|
|
17489 1.38629 1.38629 1.38629 1.38629
|
|
17490 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17491 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
|
|
17492 1.38629 1.38629 1.38629 1.38629
|
|
17493 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17494 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
17495 1.38629 1.38629 1.38629 1.38629
|
|
17496 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17497 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
|
|
17498 1.38629 1.38629 1.38629 1.38629
|
|
17499 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17500 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
|
|
17501 1.38629 1.38629 1.38629 1.38629
|
|
17502 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17503 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
|
|
17504 1.38629 1.38629 1.38629 1.38629
|
|
17505 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17506 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
|
|
17507 1.38629 1.38629 1.38629 1.38629
|
|
17508 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17509 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
17510 1.38629 1.38629 1.38629 1.38629
|
|
17511 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17512 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
17513 1.38629 1.38629 1.38629 1.38629
|
|
17514 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17515 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
17516 1.38629 1.38629 1.38629 1.38629
|
|
17517 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17518 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
|
|
17519 1.38629 1.38629 1.38629 1.38629
|
|
17520 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17521 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
17522 1.38629 1.38629 1.38629 1.38629
|
|
17523 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17524 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
17525 1.38629 1.38629 1.38629 1.38629
|
|
17526 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17527 19 2.38910 2.82844 0.25233 2.62837 19 g - - -
|
|
17528 1.38629 1.38629 1.38629 1.38629
|
|
17529 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17530 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
|
|
17531 1.38629 1.38629 1.38629 1.38629
|
|
17532 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17533 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
|
|
17534 1.38629 1.38629 1.38629 1.38629
|
|
17535 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17536 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
|
|
17537 1.38629 1.38629 1.38629 1.38629
|
|
17538 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17539 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
|
|
17540 1.38629 1.38629 1.38629 1.38629
|
|
17541 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17542 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
|
|
17543 1.38629 1.38629 1.38629 1.38629
|
|
17544 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17545 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
17546 1.38629 1.38629 1.38629 1.38629
|
|
17547 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17548 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
17549 1.38629 1.38629 1.38629 1.38629
|
|
17550 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17551 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
17552 1.38629 1.38629 1.38629 1.38629
|
|
17553 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17554 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
17555 1.38629 1.38629 1.38629 1.38629
|
|
17556 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17557 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
17558 1.38629 1.38629 1.38629 1.38629
|
|
17559 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17560 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
|
|
17561 1.38629 1.38629 1.38629 1.38629
|
|
17562 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17563 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
17564 1.38629 1.38629 1.38629 1.38629
|
|
17565 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17566 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
17567 1.38629 1.38629 1.38629 1.38629
|
|
17568 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17569 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
|
|
17570 1.38629 1.38629 1.38629 1.38629
|
|
17571 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17572 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
17573 1.38629 1.38629 1.38629 1.38629
|
|
17574 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17575 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
17576 1.38629 1.38629 1.38629 1.38629
|
|
17577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17578 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
|
|
17579 1.38629 1.38629 1.38629 1.38629
|
|
17580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17581 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
17582 1.38629 1.38629 1.38629 1.38629
|
|
17583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17584 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
|
|
17585 1.38629 1.38629 1.38629 1.38629
|
|
17586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17587 39 0.28818 2.60848 2.42319 2.42940 39 a - - -
|
|
17588 1.38629 1.38629 1.38629 1.38629
|
|
17589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17590 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
|
|
17591 1.38629 1.38629 1.38629 1.38629
|
|
17592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17593 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
|
|
17594 1.38629 1.38629 1.38629 1.38629
|
|
17595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17596 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
17597 1.38629 1.38629 1.38629 1.38629
|
|
17598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17599 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
|
|
17600 1.38629 1.38629 1.38629 1.38629
|
|
17601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17602 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
|
|
17603 1.38629 1.38629 1.38629 1.38629
|
|
17604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17605 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
|
|
17606 1.38629 1.38629 1.38629 1.38629
|
|
17607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17608 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
|
|
17609 1.38629 1.38629 1.38629 1.38629
|
|
17610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17611 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
17612 1.38629 1.38629 1.38629 1.38629
|
|
17613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17614 48 2.46232 0.33808 2.58153 2.07174 48 c - - -
|
|
17615 1.38629 1.38629 1.38629 1.38629
|
|
17616 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17617 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
|
|
17618 1.38629 1.38629 1.38629 1.38629
|
|
17619 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17620 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
17621 1.38629 1.38629 1.38629 1.38629
|
|
17622 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17623 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
17624 1.38629 1.38629 1.38629 1.38629
|
|
17625 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17626 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
|
|
17627 1.38629 1.38629 1.38629 1.38629
|
|
17628 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17629 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
|
|
17630 1.38629 1.38629 1.38629 1.38629
|
|
17631 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17632 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
|
|
17633 1.38629 1.38629 1.38629 1.38629
|
|
17634 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17635 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
17636 1.38629 1.38629 1.38629 1.38629
|
|
17637 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17638 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
17639 1.38629 1.38629 1.38629 1.38629
|
|
17640 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17641 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
|
|
17642 1.38629 1.38629 1.38629 1.38629
|
|
17643 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17644 58 2.38910 2.82844 0.25233 2.62837 58 g - - -
|
|
17645 1.38629 1.38629 1.38629 1.38629
|
|
17646 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17647 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
17648 1.38629 1.38629 1.38629 1.38629
|
|
17649 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17650 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
|
|
17651 1.38629 1.38629 1.38629 1.38629
|
|
17652 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17653 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
17654 1.38629 1.38629 1.38629 1.38629
|
|
17655 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17656 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
|
|
17657 1.38629 1.38629 1.38629 1.38629
|
|
17658 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17659 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
17660 1.38629 1.38629 1.38629 1.38629
|
|
17661 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17662 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
17663 1.38629 1.38629 1.38629 1.38629
|
|
17664 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17665 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
|
|
17666 1.38629 1.38629 1.38629 1.38629
|
|
17667 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17668 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
17669 1.38629 1.38629 1.38629 1.38629
|
|
17670 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17671 67 2.38910 2.82844 0.25233 2.62837 67 g - - -
|
|
17672 1.38629 1.38629 1.38629 1.38629
|
|
17673 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17674 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
|
|
17675 1.38629 1.38629 1.38629 1.38629
|
|
17676 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17677 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
|
|
17678 1.38629 1.38629 1.38629 1.38629
|
|
17679 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17680 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
|
|
17681 1.38629 1.38629 1.38629 1.38629
|
|
17682 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
17683 //
|
|
17684 HMMER3/f [3.2.1 | June 2018]
|
|
17685 NAME long.74.aln
|
|
17686 LENG 70
|
|
17687 MAXL 160
|
|
17688 ALPH DNA
|
|
17689 RF no
|
|
17690 MM no
|
|
17691 CONS yes
|
|
17692 CS no
|
|
17693 MAP yes
|
|
17694 DATE Tue May 28 13:12:02 2019
|
|
17695 NSEQ 2
|
|
17696 EFFN 2.000000
|
|
17697 CKSUM 1193822911
|
|
17698 STATS LOCAL MSV -8.5061 0.72241
|
|
17699 STATS LOCAL VITERBI -9.4253 0.72241
|
|
17700 STATS LOCAL FORWARD -3.1771 0.72241
|
|
17701 HMM A C G T
|
|
17702 m->m m->i m->d i->m i->i d->m d->d
|
|
17703 COMPO 1.44165 1.53142 1.74981 0.98503
|
|
17704 1.38629 1.38629 1.38629 1.38629
|
|
17705 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
17706 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
|
|
17707 1.38629 1.38629 1.38629 1.38629
|
|
17708 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17709 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
|
|
17710 1.38629 1.38629 1.38629 1.38629
|
|
17711 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17712 3 0.28818 2.60848 2.42319 2.42940 3 a - - -
|
|
17713 1.38629 1.38629 1.38629 1.38629
|
|
17714 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17715 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
|
|
17716 1.38629 1.38629 1.38629 1.38629
|
|
17717 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17718 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
|
|
17719 1.38629 1.38629 1.38629 1.38629
|
|
17720 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17721 6 2.46232 0.33808 2.58153 2.07174 6 c - - -
|
|
17722 1.38629 1.38629 1.38629 1.38629
|
|
17723 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17724 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
17725 1.38629 1.38629 1.38629 1.38629
|
|
17726 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17727 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
17728 1.38629 1.38629 1.38629 1.38629
|
|
17729 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17730 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
|
|
17731 1.38629 1.38629 1.38629 1.38629
|
|
17732 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17733 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
17734 1.38629 1.38629 1.38629 1.38629
|
|
17735 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17736 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
|
|
17737 1.38629 1.38629 1.38629 1.38629
|
|
17738 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17739 12 2.31486 2.12647 2.41211 0.36768 12 t - - -
|
|
17740 1.38629 1.38629 1.38629 1.38629
|
|
17741 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17742 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
17743 1.38629 1.38629 1.38629 1.38629
|
|
17744 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17745 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
|
|
17746 1.38629 1.38629 1.38629 1.38629
|
|
17747 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17748 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
|
|
17749 1.38629 1.38629 1.38629 1.38629
|
|
17750 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17751 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
|
|
17752 1.38629 1.38629 1.38629 1.38629
|
|
17753 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17754 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
17755 1.38629 1.38629 1.38629 1.38629
|
|
17756 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17757 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
17758 1.38629 1.38629 1.38629 1.38629
|
|
17759 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17760 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
|
|
17761 1.38629 1.38629 1.38629 1.38629
|
|
17762 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17763 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
17764 1.38629 1.38629 1.38629 1.38629
|
|
17765 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17766 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
|
|
17767 1.38629 1.38629 1.38629 1.38629
|
|
17768 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17769 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
17770 1.38629 1.38629 1.38629 1.38629
|
|
17771 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17772 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
17773 1.38629 1.38629 1.38629 1.38629
|
|
17774 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17775 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
|
|
17776 1.38629 1.38629 1.38629 1.38629
|
|
17777 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17778 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
|
|
17779 1.38629 1.38629 1.38629 1.38629
|
|
17780 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17781 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
17782 1.38629 1.38629 1.38629 1.38629
|
|
17783 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17784 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
|
|
17785 1.38629 1.38629 1.38629 1.38629
|
|
17786 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17787 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
17788 1.38629 1.38629 1.38629 1.38629
|
|
17789 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17790 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
17791 1.38629 1.38629 1.38629 1.38629
|
|
17792 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17793 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
|
|
17794 1.38629 1.38629 1.38629 1.38629
|
|
17795 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17796 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
|
|
17797 1.38629 1.38629 1.38629 1.38629
|
|
17798 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17799 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
17800 1.38629 1.38629 1.38629 1.38629
|
|
17801 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17802 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
|
|
17803 1.38629 1.38629 1.38629 1.38629
|
|
17804 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17805 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
17806 1.38629 1.38629 1.38629 1.38629
|
|
17807 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17808 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
17809 1.38629 1.38629 1.38629 1.38629
|
|
17810 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17811 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
|
|
17812 1.38629 1.38629 1.38629 1.38629
|
|
17813 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17814 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
17815 1.38629 1.38629 1.38629 1.38629
|
|
17816 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17817 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
|
|
17818 1.38629 1.38629 1.38629 1.38629
|
|
17819 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17820 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
|
|
17821 1.38629 1.38629 1.38629 1.38629
|
|
17822 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17823 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
17824 1.38629 1.38629 1.38629 1.38629
|
|
17825 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17826 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
|
|
17827 1.38629 1.38629 1.38629 1.38629
|
|
17828 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17829 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
17830 1.38629 1.38629 1.38629 1.38629
|
|
17831 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17832 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
17833 1.38629 1.38629 1.38629 1.38629
|
|
17834 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17835 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
17836 1.38629 1.38629 1.38629 1.38629
|
|
17837 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17838 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
|
|
17839 1.38629 1.38629 1.38629 1.38629
|
|
17840 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17841 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
17842 1.38629 1.38629 1.38629 1.38629
|
|
17843 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17844 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
|
|
17845 1.38629 1.38629 1.38629 1.38629
|
|
17846 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17847 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
|
|
17848 1.38629 1.38629 1.38629 1.38629
|
|
17849 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17850 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
|
|
17851 1.38629 1.38629 1.38629 1.38629
|
|
17852 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17853 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
|
|
17854 1.38629 1.38629 1.38629 1.38629
|
|
17855 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17856 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
17857 1.38629 1.38629 1.38629 1.38629
|
|
17858 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17859 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
|
|
17860 1.38629 1.38629 1.38629 1.38629
|
|
17861 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17862 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
|
|
17863 1.38629 1.38629 1.38629 1.38629
|
|
17864 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17865 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
|
|
17866 1.38629 1.38629 1.38629 1.38629
|
|
17867 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17868 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
17869 1.38629 1.38629 1.38629 1.38629
|
|
17870 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17871 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
|
|
17872 1.38629 1.38629 1.38629 1.38629
|
|
17873 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17874 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
|
|
17875 1.38629 1.38629 1.38629 1.38629
|
|
17876 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17877 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
17878 1.38629 1.38629 1.38629 1.38629
|
|
17879 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17880 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
|
|
17881 1.38629 1.38629 1.38629 1.38629
|
|
17882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17883 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
|
|
17884 1.38629 1.38629 1.38629 1.38629
|
|
17885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17886 61 2.38910 2.82844 0.25233 2.62837 61 g - - -
|
|
17887 1.38629 1.38629 1.38629 1.38629
|
|
17888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17889 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
|
|
17890 1.38629 1.38629 1.38629 1.38629
|
|
17891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17892 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
|
|
17893 1.38629 1.38629 1.38629 1.38629
|
|
17894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17895 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
17896 1.38629 1.38629 1.38629 1.38629
|
|
17897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17898 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
|
|
17899 1.38629 1.38629 1.38629 1.38629
|
|
17900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17901 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
17902 1.38629 1.38629 1.38629 1.38629
|
|
17903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17904 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
17905 1.38629 1.38629 1.38629 1.38629
|
|
17906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17907 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
|
|
17908 1.38629 1.38629 1.38629 1.38629
|
|
17909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17910 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
|
|
17911 1.38629 1.38629 1.38629 1.38629
|
|
17912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17913 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
|
|
17914 1.38629 1.38629 1.38629 1.38629
|
|
17915 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
17916 //
|
|
17917 HMMER3/f [3.2.1 | June 2018]
|
|
17918 NAME long.75.aln
|
|
17919 LENG 70
|
|
17920 MAXL 160
|
|
17921 ALPH DNA
|
|
17922 RF no
|
|
17923 MM no
|
|
17924 CONS yes
|
|
17925 CS no
|
|
17926 MAP yes
|
|
17927 DATE Tue May 28 13:12:02 2019
|
|
17928 NSEQ 2
|
|
17929 EFFN 2.000000
|
|
17930 CKSUM 3275121080
|
|
17931 STATS LOCAL MSV -8.4136 0.72163
|
|
17932 STATS LOCAL VITERBI -9.2547 0.72163
|
|
17933 STATS LOCAL FORWARD -3.4838 0.72163
|
|
17934 HMM A C G T
|
|
17935 m->m m->i m->d i->m i->i d->m d->d
|
|
17936 COMPO 1.40853 1.62732 1.52276 1.07607
|
|
17937 1.38629 1.38629 1.38629 1.38629
|
|
17938 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
17939 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
17940 1.38629 1.38629 1.38629 1.38629
|
|
17941 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17942 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
|
|
17943 1.38629 1.38629 1.38629 1.38629
|
|
17944 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17945 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
|
|
17946 1.38629 1.38629 1.38629 1.38629
|
|
17947 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17948 4 2.38910 2.82844 0.25233 2.62837 4 g - - -
|
|
17949 1.38629 1.38629 1.38629 1.38629
|
|
17950 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17951 5 0.28818 2.60848 2.42319 2.42940 5 a - - -
|
|
17952 1.38629 1.38629 1.38629 1.38629
|
|
17953 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17954 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
17955 1.38629 1.38629 1.38629 1.38629
|
|
17956 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17957 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
17958 1.38629 1.38629 1.38629 1.38629
|
|
17959 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17960 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
|
|
17961 1.38629 1.38629 1.38629 1.38629
|
|
17962 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17963 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
17964 1.38629 1.38629 1.38629 1.38629
|
|
17965 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17966 10 2.46232 0.33808 2.58153 2.07174 10 c - - -
|
|
17967 1.38629 1.38629 1.38629 1.38629
|
|
17968 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17969 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
17970 1.38629 1.38629 1.38629 1.38629
|
|
17971 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17972 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
17973 1.38629 1.38629 1.38629 1.38629
|
|
17974 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17975 13 0.28818 2.60848 2.42319 2.42940 13 a - - -
|
|
17976 1.38629 1.38629 1.38629 1.38629
|
|
17977 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17978 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
|
|
17979 1.38629 1.38629 1.38629 1.38629
|
|
17980 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17981 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
|
|
17982 1.38629 1.38629 1.38629 1.38629
|
|
17983 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17984 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
|
|
17985 1.38629 1.38629 1.38629 1.38629
|
|
17986 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17987 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
17988 1.38629 1.38629 1.38629 1.38629
|
|
17989 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17990 18 2.38910 2.82844 0.25233 2.62837 18 g - - -
|
|
17991 1.38629 1.38629 1.38629 1.38629
|
|
17992 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17993 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
|
|
17994 1.38629 1.38629 1.38629 1.38629
|
|
17995 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17996 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
17997 1.38629 1.38629 1.38629 1.38629
|
|
17998 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
17999 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
|
|
18000 1.38629 1.38629 1.38629 1.38629
|
|
18001 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18002 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
|
|
18003 1.38629 1.38629 1.38629 1.38629
|
|
18004 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18005 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
18006 1.38629 1.38629 1.38629 1.38629
|
|
18007 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18008 24 2.46232 0.33808 2.58153 2.07174 24 c - - -
|
|
18009 1.38629 1.38629 1.38629 1.38629
|
|
18010 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18011 25 2.31486 2.12647 2.41211 0.36768 25 t - - -
|
|
18012 1.38629 1.38629 1.38629 1.38629
|
|
18013 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18014 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
18015 1.38629 1.38629 1.38629 1.38629
|
|
18016 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18017 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
18018 1.38629 1.38629 1.38629 1.38629
|
|
18019 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18020 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
|
|
18021 1.38629 1.38629 1.38629 1.38629
|
|
18022 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18023 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
|
|
18024 1.38629 1.38629 1.38629 1.38629
|
|
18025 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18026 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
|
|
18027 1.38629 1.38629 1.38629 1.38629
|
|
18028 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18029 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
|
|
18030 1.38629 1.38629 1.38629 1.38629
|
|
18031 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18032 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
18033 1.38629 1.38629 1.38629 1.38629
|
|
18034 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18035 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
18036 1.38629 1.38629 1.38629 1.38629
|
|
18037 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18038 34 2.38910 2.82844 0.25233 2.62837 34 g - - -
|
|
18039 1.38629 1.38629 1.38629 1.38629
|
|
18040 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18041 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
18042 1.38629 1.38629 1.38629 1.38629
|
|
18043 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18044 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
|
|
18045 1.38629 1.38629 1.38629 1.38629
|
|
18046 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18047 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
|
|
18048 1.38629 1.38629 1.38629 1.38629
|
|
18049 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18050 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
18051 1.38629 1.38629 1.38629 1.38629
|
|
18052 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18053 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
|
|
18054 1.38629 1.38629 1.38629 1.38629
|
|
18055 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18056 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
|
|
18057 1.38629 1.38629 1.38629 1.38629
|
|
18058 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18059 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
18060 1.38629 1.38629 1.38629 1.38629
|
|
18061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18062 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
|
|
18063 1.38629 1.38629 1.38629 1.38629
|
|
18064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18065 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
|
|
18066 1.38629 1.38629 1.38629 1.38629
|
|
18067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18068 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
|
|
18069 1.38629 1.38629 1.38629 1.38629
|
|
18070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18071 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
18072 1.38629 1.38629 1.38629 1.38629
|
|
18073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18074 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
18075 1.38629 1.38629 1.38629 1.38629
|
|
18076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18077 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
|
|
18078 1.38629 1.38629 1.38629 1.38629
|
|
18079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18080 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
|
|
18081 1.38629 1.38629 1.38629 1.38629
|
|
18082 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18083 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
|
|
18084 1.38629 1.38629 1.38629 1.38629
|
|
18085 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18086 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
18087 1.38629 1.38629 1.38629 1.38629
|
|
18088 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18089 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
|
|
18090 1.38629 1.38629 1.38629 1.38629
|
|
18091 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18092 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
|
|
18093 1.38629 1.38629 1.38629 1.38629
|
|
18094 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18095 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
|
|
18096 1.38629 1.38629 1.38629 1.38629
|
|
18097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18098 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
18099 1.38629 1.38629 1.38629 1.38629
|
|
18100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18101 55 0.28818 2.60848 2.42319 2.42940 55 a - - -
|
|
18102 1.38629 1.38629 1.38629 1.38629
|
|
18103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18104 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
18105 1.38629 1.38629 1.38629 1.38629
|
|
18106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18107 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
|
|
18108 1.38629 1.38629 1.38629 1.38629
|
|
18109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18110 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
|
|
18111 1.38629 1.38629 1.38629 1.38629
|
|
18112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18113 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
18114 1.38629 1.38629 1.38629 1.38629
|
|
18115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18116 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
|
|
18117 1.38629 1.38629 1.38629 1.38629
|
|
18118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18119 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
18120 1.38629 1.38629 1.38629 1.38629
|
|
18121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18122 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
|
|
18123 1.38629 1.38629 1.38629 1.38629
|
|
18124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18125 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
|
|
18126 1.38629 1.38629 1.38629 1.38629
|
|
18127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18128 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
|
|
18129 1.38629 1.38629 1.38629 1.38629
|
|
18130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18131 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
|
|
18132 1.38629 1.38629 1.38629 1.38629
|
|
18133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18134 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
|
|
18135 1.38629 1.38629 1.38629 1.38629
|
|
18136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18137 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
|
|
18138 1.38629 1.38629 1.38629 1.38629
|
|
18139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18140 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
|
|
18141 1.38629 1.38629 1.38629 1.38629
|
|
18142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18143 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
|
|
18144 1.38629 1.38629 1.38629 1.38629
|
|
18145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18146 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
|
|
18147 1.38629 1.38629 1.38629 1.38629
|
|
18148 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
18149 //
|
|
18150 HMMER3/f [3.2.1 | June 2018]
|
|
18151 NAME long.76.aln
|
|
18152 LENG 70
|
|
18153 MAXL 160
|
|
18154 ALPH DNA
|
|
18155 RF no
|
|
18156 MM no
|
|
18157 CONS yes
|
|
18158 CS no
|
|
18159 MAP yes
|
|
18160 DATE Tue May 28 13:12:02 2019
|
|
18161 NSEQ 2
|
|
18162 EFFN 2.000000
|
|
18163 CKSUM 2027655957
|
|
18164 STATS LOCAL MSV -8.3586 0.72225
|
|
18165 STATS LOCAL VITERBI -9.4971 0.72225
|
|
18166 STATS LOCAL FORWARD -3.3563 0.72225
|
|
18167 HMM A C G T
|
|
18168 m->m m->i m->d i->m i->i d->m d->d
|
|
18169 COMPO 1.44704 1.27813 1.81427 1.12942
|
|
18170 1.38629 1.38629 1.38629 1.38629
|
|
18171 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
18172 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
|
|
18173 1.38629 1.38629 1.38629 1.38629
|
|
18174 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18175 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
|
|
18176 1.38629 1.38629 1.38629 1.38629
|
|
18177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18178 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
|
|
18179 1.38629 1.38629 1.38629 1.38629
|
|
18180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18181 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
|
|
18182 1.38629 1.38629 1.38629 1.38629
|
|
18183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18184 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
|
|
18185 1.38629 1.38629 1.38629 1.38629
|
|
18186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18187 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
|
|
18188 1.38629 1.38629 1.38629 1.38629
|
|
18189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18190 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
18191 1.38629 1.38629 1.38629 1.38629
|
|
18192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18193 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
|
|
18194 1.38629 1.38629 1.38629 1.38629
|
|
18195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18196 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
|
|
18197 1.38629 1.38629 1.38629 1.38629
|
|
18198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18199 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
|
|
18200 1.38629 1.38629 1.38629 1.38629
|
|
18201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18202 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
18203 1.38629 1.38629 1.38629 1.38629
|
|
18204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18205 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
18206 1.38629 1.38629 1.38629 1.38629
|
|
18207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18208 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
18209 1.38629 1.38629 1.38629 1.38629
|
|
18210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18211 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
|
|
18212 1.38629 1.38629 1.38629 1.38629
|
|
18213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18214 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
|
|
18215 1.38629 1.38629 1.38629 1.38629
|
|
18216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18217 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
18218 1.38629 1.38629 1.38629 1.38629
|
|
18219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18220 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
18221 1.38629 1.38629 1.38629 1.38629
|
|
18222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18223 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
18224 1.38629 1.38629 1.38629 1.38629
|
|
18225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18226 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
18227 1.38629 1.38629 1.38629 1.38629
|
|
18228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18229 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
|
|
18230 1.38629 1.38629 1.38629 1.38629
|
|
18231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18232 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
18233 1.38629 1.38629 1.38629 1.38629
|
|
18234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18235 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
|
|
18236 1.38629 1.38629 1.38629 1.38629
|
|
18237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18238 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
18239 1.38629 1.38629 1.38629 1.38629
|
|
18240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18241 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
|
|
18242 1.38629 1.38629 1.38629 1.38629
|
|
18243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18244 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
18245 1.38629 1.38629 1.38629 1.38629
|
|
18246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18247 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
18248 1.38629 1.38629 1.38629 1.38629
|
|
18249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18250 27 2.46232 0.33808 2.58153 2.07174 27 c - - -
|
|
18251 1.38629 1.38629 1.38629 1.38629
|
|
18252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18253 28 2.46232 0.33808 2.58153 2.07174 28 c - - -
|
|
18254 1.38629 1.38629 1.38629 1.38629
|
|
18255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18256 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
|
|
18257 1.38629 1.38629 1.38629 1.38629
|
|
18258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18259 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
|
|
18260 1.38629 1.38629 1.38629 1.38629
|
|
18261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18262 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
18263 1.38629 1.38629 1.38629 1.38629
|
|
18264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18265 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
18266 1.38629 1.38629 1.38629 1.38629
|
|
18267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18268 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
|
|
18269 1.38629 1.38629 1.38629 1.38629
|
|
18270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18271 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
18272 1.38629 1.38629 1.38629 1.38629
|
|
18273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18274 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
|
|
18275 1.38629 1.38629 1.38629 1.38629
|
|
18276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18277 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
|
|
18278 1.38629 1.38629 1.38629 1.38629
|
|
18279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18280 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
|
|
18281 1.38629 1.38629 1.38629 1.38629
|
|
18282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18283 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
18284 1.38629 1.38629 1.38629 1.38629
|
|
18285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18286 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
|
|
18287 1.38629 1.38629 1.38629 1.38629
|
|
18288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18289 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
18290 1.38629 1.38629 1.38629 1.38629
|
|
18291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18292 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
18293 1.38629 1.38629 1.38629 1.38629
|
|
18294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18295 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
|
|
18296 1.38629 1.38629 1.38629 1.38629
|
|
18297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18298 43 2.31486 2.12647 2.41211 0.36768 43 t - - -
|
|
18299 1.38629 1.38629 1.38629 1.38629
|
|
18300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18301 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
|
|
18302 1.38629 1.38629 1.38629 1.38629
|
|
18303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18304 45 2.31486 2.12647 2.41211 0.36768 45 t - - -
|
|
18305 1.38629 1.38629 1.38629 1.38629
|
|
18306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18307 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
|
|
18308 1.38629 1.38629 1.38629 1.38629
|
|
18309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18310 47 2.46232 0.33808 2.58153 2.07174 47 c - - -
|
|
18311 1.38629 1.38629 1.38629 1.38629
|
|
18312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18313 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
|
|
18314 1.38629 1.38629 1.38629 1.38629
|
|
18315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18316 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
|
|
18317 1.38629 1.38629 1.38629 1.38629
|
|
18318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18319 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
|
|
18320 1.38629 1.38629 1.38629 1.38629
|
|
18321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18322 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
18323 1.38629 1.38629 1.38629 1.38629
|
|
18324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18325 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
|
|
18326 1.38629 1.38629 1.38629 1.38629
|
|
18327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18328 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
|
|
18329 1.38629 1.38629 1.38629 1.38629
|
|
18330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18331 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
18332 1.38629 1.38629 1.38629 1.38629
|
|
18333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18334 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
|
|
18335 1.38629 1.38629 1.38629 1.38629
|
|
18336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18337 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
|
|
18338 1.38629 1.38629 1.38629 1.38629
|
|
18339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18340 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
|
|
18341 1.38629 1.38629 1.38629 1.38629
|
|
18342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18343 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
|
|
18344 1.38629 1.38629 1.38629 1.38629
|
|
18345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18346 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
|
|
18347 1.38629 1.38629 1.38629 1.38629
|
|
18348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18349 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
|
|
18350 1.38629 1.38629 1.38629 1.38629
|
|
18351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18352 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
18353 1.38629 1.38629 1.38629 1.38629
|
|
18354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18355 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
18356 1.38629 1.38629 1.38629 1.38629
|
|
18357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18358 63 2.38910 2.82844 0.25233 2.62837 63 g - - -
|
|
18359 1.38629 1.38629 1.38629 1.38629
|
|
18360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18361 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
|
|
18362 1.38629 1.38629 1.38629 1.38629
|
|
18363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18364 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
|
|
18365 1.38629 1.38629 1.38629 1.38629
|
|
18366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18367 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
18368 1.38629 1.38629 1.38629 1.38629
|
|
18369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18370 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
18371 1.38629 1.38629 1.38629 1.38629
|
|
18372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18373 68 2.46232 0.33808 2.58153 2.07174 68 c - - -
|
|
18374 1.38629 1.38629 1.38629 1.38629
|
|
18375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18376 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
|
|
18377 1.38629 1.38629 1.38629 1.38629
|
|
18378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18379 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
|
|
18380 1.38629 1.38629 1.38629 1.38629
|
|
18381 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
18382 //
|
|
18383 HMMER3/f [3.2.1 | June 2018]
|
|
18384 NAME long.77.aln
|
|
18385 LENG 70
|
|
18386 MAXL 160
|
|
18387 ALPH DNA
|
|
18388 RF no
|
|
18389 MM no
|
|
18390 CONS yes
|
|
18391 CS no
|
|
18392 MAP yes
|
|
18393 DATE Tue May 28 13:12:02 2019
|
|
18394 NSEQ 2
|
|
18395 EFFN 2.000000
|
|
18396 CKSUM 976848233
|
|
18397 STATS LOCAL MSV -7.7061 0.71985
|
|
18398 STATS LOCAL VITERBI -9.2820 0.71985
|
|
18399 STATS LOCAL FORWARD -3.6293 0.71985
|
|
18400 HMM A C G T
|
|
18401 m->m m->i m->d i->m i->i d->m d->d
|
|
18402 COMPO 1.16788 1.56354 1.27373 1.61046
|
|
18403 1.38629 1.38629 1.38629 1.38629
|
|
18404 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
18405 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
|
|
18406 1.38629 1.38629 1.38629 1.38629
|
|
18407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18408 2 2.38910 2.82844 0.25233 2.62837 2 g - - -
|
|
18409 1.38629 1.38629 1.38629 1.38629
|
|
18410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18411 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
|
|
18412 1.38629 1.38629 1.38629 1.38629
|
|
18413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18414 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
|
|
18415 1.38629 1.38629 1.38629 1.38629
|
|
18416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18417 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
|
|
18418 1.38629 1.38629 1.38629 1.38629
|
|
18419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18420 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
|
|
18421 1.38629 1.38629 1.38629 1.38629
|
|
18422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18423 7 0.28818 2.60848 2.42319 2.42940 7 a - - -
|
|
18424 1.38629 1.38629 1.38629 1.38629
|
|
18425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18426 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
18427 1.38629 1.38629 1.38629 1.38629
|
|
18428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18429 9 0.28818 2.60848 2.42319 2.42940 9 a - - -
|
|
18430 1.38629 1.38629 1.38629 1.38629
|
|
18431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18432 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
|
|
18433 1.38629 1.38629 1.38629 1.38629
|
|
18434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18435 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
|
|
18436 1.38629 1.38629 1.38629 1.38629
|
|
18437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18438 12 2.46232 0.33808 2.58153 2.07174 12 c - - -
|
|
18439 1.38629 1.38629 1.38629 1.38629
|
|
18440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18441 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
|
|
18442 1.38629 1.38629 1.38629 1.38629
|
|
18443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18444 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
18445 1.38629 1.38629 1.38629 1.38629
|
|
18446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18447 15 2.31486 2.12647 2.41211 0.36768 15 t - - -
|
|
18448 1.38629 1.38629 1.38629 1.38629
|
|
18449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18450 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
18451 1.38629 1.38629 1.38629 1.38629
|
|
18452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18453 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
|
|
18454 1.38629 1.38629 1.38629 1.38629
|
|
18455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18456 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
18457 1.38629 1.38629 1.38629 1.38629
|
|
18458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18459 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
|
|
18460 1.38629 1.38629 1.38629 1.38629
|
|
18461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18462 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
|
|
18463 1.38629 1.38629 1.38629 1.38629
|
|
18464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18465 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
18466 1.38629 1.38629 1.38629 1.38629
|
|
18467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18468 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
|
|
18469 1.38629 1.38629 1.38629 1.38629
|
|
18470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18471 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
18472 1.38629 1.38629 1.38629 1.38629
|
|
18473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18474 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
|
|
18475 1.38629 1.38629 1.38629 1.38629
|
|
18476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18477 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
|
|
18478 1.38629 1.38629 1.38629 1.38629
|
|
18479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18480 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
|
|
18481 1.38629 1.38629 1.38629 1.38629
|
|
18482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18483 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
|
|
18484 1.38629 1.38629 1.38629 1.38629
|
|
18485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18486 28 0.28818 2.60848 2.42319 2.42940 28 a - - -
|
|
18487 1.38629 1.38629 1.38629 1.38629
|
|
18488 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18489 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
|
|
18490 1.38629 1.38629 1.38629 1.38629
|
|
18491 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18492 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
|
|
18493 1.38629 1.38629 1.38629 1.38629
|
|
18494 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18495 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
|
|
18496 1.38629 1.38629 1.38629 1.38629
|
|
18497 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18498 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
|
|
18499 1.38629 1.38629 1.38629 1.38629
|
|
18500 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18501 33 0.28818 2.60848 2.42319 2.42940 33 a - - -
|
|
18502 1.38629 1.38629 1.38629 1.38629
|
|
18503 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18504 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
18505 1.38629 1.38629 1.38629 1.38629
|
|
18506 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18507 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
|
|
18508 1.38629 1.38629 1.38629 1.38629
|
|
18509 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18510 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
|
|
18511 1.38629 1.38629 1.38629 1.38629
|
|
18512 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18513 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
|
|
18514 1.38629 1.38629 1.38629 1.38629
|
|
18515 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18516 38 0.28818 2.60848 2.42319 2.42940 38 a - - -
|
|
18517 1.38629 1.38629 1.38629 1.38629
|
|
18518 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18519 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
18520 1.38629 1.38629 1.38629 1.38629
|
|
18521 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18522 40 2.38910 2.82844 0.25233 2.62837 40 g - - -
|
|
18523 1.38629 1.38629 1.38629 1.38629
|
|
18524 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18525 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
18526 1.38629 1.38629 1.38629 1.38629
|
|
18527 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18528 42 0.28818 2.60848 2.42319 2.42940 42 a - - -
|
|
18529 1.38629 1.38629 1.38629 1.38629
|
|
18530 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18531 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
|
|
18532 1.38629 1.38629 1.38629 1.38629
|
|
18533 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18534 44 2.46232 0.33808 2.58153 2.07174 44 c - - -
|
|
18535 1.38629 1.38629 1.38629 1.38629
|
|
18536 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18537 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
|
|
18538 1.38629 1.38629 1.38629 1.38629
|
|
18539 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18540 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
|
|
18541 1.38629 1.38629 1.38629 1.38629
|
|
18542 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18543 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
|
|
18544 1.38629 1.38629 1.38629 1.38629
|
|
18545 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18546 48 2.31486 2.12647 2.41211 0.36768 48 t - - -
|
|
18547 1.38629 1.38629 1.38629 1.38629
|
|
18548 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18549 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
|
|
18550 1.38629 1.38629 1.38629 1.38629
|
|
18551 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18552 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
|
|
18553 1.38629 1.38629 1.38629 1.38629
|
|
18554 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18555 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
18556 1.38629 1.38629 1.38629 1.38629
|
|
18557 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18558 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
|
|
18559 1.38629 1.38629 1.38629 1.38629
|
|
18560 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18561 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
|
|
18562 1.38629 1.38629 1.38629 1.38629
|
|
18563 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18564 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
|
|
18565 1.38629 1.38629 1.38629 1.38629
|
|
18566 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18567 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
|
|
18568 1.38629 1.38629 1.38629 1.38629
|
|
18569 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18570 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
18571 1.38629 1.38629 1.38629 1.38629
|
|
18572 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18573 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
|
|
18574 1.38629 1.38629 1.38629 1.38629
|
|
18575 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18576 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
18577 1.38629 1.38629 1.38629 1.38629
|
|
18578 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18579 59 2.46232 0.33808 2.58153 2.07174 59 c - - -
|
|
18580 1.38629 1.38629 1.38629 1.38629
|
|
18581 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18582 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
|
|
18583 1.38629 1.38629 1.38629 1.38629
|
|
18584 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18585 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
18586 1.38629 1.38629 1.38629 1.38629
|
|
18587 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18588 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
|
|
18589 1.38629 1.38629 1.38629 1.38629
|
|
18590 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18591 63 0.28818 2.60848 2.42319 2.42940 63 a - - -
|
|
18592 1.38629 1.38629 1.38629 1.38629
|
|
18593 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18594 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
|
|
18595 1.38629 1.38629 1.38629 1.38629
|
|
18596 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18597 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
|
|
18598 1.38629 1.38629 1.38629 1.38629
|
|
18599 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18600 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
18601 1.38629 1.38629 1.38629 1.38629
|
|
18602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18603 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
|
|
18604 1.38629 1.38629 1.38629 1.38629
|
|
18605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18606 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
|
|
18607 1.38629 1.38629 1.38629 1.38629
|
|
18608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18609 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
|
|
18610 1.38629 1.38629 1.38629 1.38629
|
|
18611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18612 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
|
|
18613 1.38629 1.38629 1.38629 1.38629
|
|
18614 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
18615 //
|
|
18616 HMMER3/f [3.2.1 | June 2018]
|
|
18617 NAME long.78.aln
|
|
18618 LENG 70
|
|
18619 MAXL 160
|
|
18620 ALPH DNA
|
|
18621 RF no
|
|
18622 MM no
|
|
18623 CONS yes
|
|
18624 CS no
|
|
18625 MAP yes
|
|
18626 DATE Tue May 28 13:12:02 2019
|
|
18627 NSEQ 2
|
|
18628 EFFN 2.000000
|
|
18629 CKSUM 2522115511
|
|
18630 STATS LOCAL MSV -8.2929 0.72184
|
|
18631 STATS LOCAL VITERBI -9.4215 0.72184
|
|
18632 STATS LOCAL FORWARD -3.5618 0.72184
|
|
18633 HMM A C G T
|
|
18634 m->m m->i m->d i->m i->i d->m d->d
|
|
18635 COMPO 1.51931 1.54164 1.52480 1.05142
|
|
18636 1.38629 1.38629 1.38629 1.38629
|
|
18637 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
18638 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
|
|
18639 1.38629 1.38629 1.38629 1.38629
|
|
18640 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18641 2 2.31486 2.12647 2.41211 0.36768 2 t - - -
|
|
18642 1.38629 1.38629 1.38629 1.38629
|
|
18643 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18644 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
|
|
18645 1.38629 1.38629 1.38629 1.38629
|
|
18646 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18647 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
|
|
18648 1.38629 1.38629 1.38629 1.38629
|
|
18649 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18650 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
|
|
18651 1.38629 1.38629 1.38629 1.38629
|
|
18652 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18653 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
18654 1.38629 1.38629 1.38629 1.38629
|
|
18655 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18656 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
|
|
18657 1.38629 1.38629 1.38629 1.38629
|
|
18658 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18659 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
18660 1.38629 1.38629 1.38629 1.38629
|
|
18661 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18662 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
|
|
18663 1.38629 1.38629 1.38629 1.38629
|
|
18664 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18665 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
|
|
18666 1.38629 1.38629 1.38629 1.38629
|
|
18667 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18668 11 2.31486 2.12647 2.41211 0.36768 11 t - - -
|
|
18669 1.38629 1.38629 1.38629 1.38629
|
|
18670 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18671 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
18672 1.38629 1.38629 1.38629 1.38629
|
|
18673 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18674 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
|
|
18675 1.38629 1.38629 1.38629 1.38629
|
|
18676 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18677 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
18678 1.38629 1.38629 1.38629 1.38629
|
|
18679 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18680 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
|
|
18681 1.38629 1.38629 1.38629 1.38629
|
|
18682 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18683 16 2.38910 2.82844 0.25233 2.62837 16 g - - -
|
|
18684 1.38629 1.38629 1.38629 1.38629
|
|
18685 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18686 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
18687 1.38629 1.38629 1.38629 1.38629
|
|
18688 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18689 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
18690 1.38629 1.38629 1.38629 1.38629
|
|
18691 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18692 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
18693 1.38629 1.38629 1.38629 1.38629
|
|
18694 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18695 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
18696 1.38629 1.38629 1.38629 1.38629
|
|
18697 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18698 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
18699 1.38629 1.38629 1.38629 1.38629
|
|
18700 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18701 22 2.46232 0.33808 2.58153 2.07174 22 c - - -
|
|
18702 1.38629 1.38629 1.38629 1.38629
|
|
18703 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18704 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
18705 1.38629 1.38629 1.38629 1.38629
|
|
18706 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18707 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
|
|
18708 1.38629 1.38629 1.38629 1.38629
|
|
18709 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18710 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
18711 1.38629 1.38629 1.38629 1.38629
|
|
18712 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18713 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
18714 1.38629 1.38629 1.38629 1.38629
|
|
18715 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18716 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
|
|
18717 1.38629 1.38629 1.38629 1.38629
|
|
18718 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18719 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
18720 1.38629 1.38629 1.38629 1.38629
|
|
18721 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18722 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
|
|
18723 1.38629 1.38629 1.38629 1.38629
|
|
18724 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18725 30 0.28818 2.60848 2.42319 2.42940 30 a - - -
|
|
18726 1.38629 1.38629 1.38629 1.38629
|
|
18727 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18728 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
|
|
18729 1.38629 1.38629 1.38629 1.38629
|
|
18730 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18731 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
18732 1.38629 1.38629 1.38629 1.38629
|
|
18733 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18734 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
|
|
18735 1.38629 1.38629 1.38629 1.38629
|
|
18736 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18737 34 2.46232 0.33808 2.58153 2.07174 34 c - - -
|
|
18738 1.38629 1.38629 1.38629 1.38629
|
|
18739 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18740 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
18741 1.38629 1.38629 1.38629 1.38629
|
|
18742 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18743 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
18744 1.38629 1.38629 1.38629 1.38629
|
|
18745 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18746 37 2.31486 2.12647 2.41211 0.36768 37 t - - -
|
|
18747 1.38629 1.38629 1.38629 1.38629
|
|
18748 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18749 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
|
|
18750 1.38629 1.38629 1.38629 1.38629
|
|
18751 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18752 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
|
|
18753 1.38629 1.38629 1.38629 1.38629
|
|
18754 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18755 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
18756 1.38629 1.38629 1.38629 1.38629
|
|
18757 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18758 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
|
|
18759 1.38629 1.38629 1.38629 1.38629
|
|
18760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18761 42 2.46232 0.33808 2.58153 2.07174 42 c - - -
|
|
18762 1.38629 1.38629 1.38629 1.38629
|
|
18763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18764 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
|
|
18765 1.38629 1.38629 1.38629 1.38629
|
|
18766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18767 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
18768 1.38629 1.38629 1.38629 1.38629
|
|
18769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18770 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
|
|
18771 1.38629 1.38629 1.38629 1.38629
|
|
18772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18773 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
18774 1.38629 1.38629 1.38629 1.38629
|
|
18775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18776 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
18777 1.38629 1.38629 1.38629 1.38629
|
|
18778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18779 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
|
|
18780 1.38629 1.38629 1.38629 1.38629
|
|
18781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18782 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
|
|
18783 1.38629 1.38629 1.38629 1.38629
|
|
18784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18785 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
|
|
18786 1.38629 1.38629 1.38629 1.38629
|
|
18787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18788 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
18789 1.38629 1.38629 1.38629 1.38629
|
|
18790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18791 52 2.38910 2.82844 0.25233 2.62837 52 g - - -
|
|
18792 1.38629 1.38629 1.38629 1.38629
|
|
18793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18794 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
|
|
18795 1.38629 1.38629 1.38629 1.38629
|
|
18796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18797 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
|
|
18798 1.38629 1.38629 1.38629 1.38629
|
|
18799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18800 55 2.31486 2.12647 2.41211 0.36768 55 t - - -
|
|
18801 1.38629 1.38629 1.38629 1.38629
|
|
18802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18803 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
18804 1.38629 1.38629 1.38629 1.38629
|
|
18805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18806 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
|
|
18807 1.38629 1.38629 1.38629 1.38629
|
|
18808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18809 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
18810 1.38629 1.38629 1.38629 1.38629
|
|
18811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18812 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
|
|
18813 1.38629 1.38629 1.38629 1.38629
|
|
18814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18815 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
18816 1.38629 1.38629 1.38629 1.38629
|
|
18817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18818 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
18819 1.38629 1.38629 1.38629 1.38629
|
|
18820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18821 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
|
|
18822 1.38629 1.38629 1.38629 1.38629
|
|
18823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18824 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
|
|
18825 1.38629 1.38629 1.38629 1.38629
|
|
18826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18827 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
|
|
18828 1.38629 1.38629 1.38629 1.38629
|
|
18829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18830 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
|
|
18831 1.38629 1.38629 1.38629 1.38629
|
|
18832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18833 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
18834 1.38629 1.38629 1.38629 1.38629
|
|
18835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18836 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
18837 1.38629 1.38629 1.38629 1.38629
|
|
18838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18839 68 2.31486 2.12647 2.41211 0.36768 68 t - - -
|
|
18840 1.38629 1.38629 1.38629 1.38629
|
|
18841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18842 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
18843 1.38629 1.38629 1.38629 1.38629
|
|
18844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18845 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
|
|
18846 1.38629 1.38629 1.38629 1.38629
|
|
18847 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
18848 //
|
|
18849 HMMER3/f [3.2.1 | June 2018]
|
|
18850 NAME long.79.aln
|
|
18851 LENG 70
|
|
18852 MAXL 160
|
|
18853 ALPH DNA
|
|
18854 RF no
|
|
18855 MM no
|
|
18856 CONS yes
|
|
18857 CS no
|
|
18858 MAP yes
|
|
18859 DATE Tue May 28 13:12:02 2019
|
|
18860 NSEQ 2
|
|
18861 EFFN 2.000000
|
|
18862 CKSUM 1636119314
|
|
18863 STATS LOCAL MSV -8.2610 0.72156
|
|
18864 STATS LOCAL VITERBI -9.3322 0.72156
|
|
18865 STATS LOCAL FORWARD -3.1566 0.72156
|
|
18866 HMM A C G T
|
|
18867 m->m m->i m->d i->m i->i d->m d->d
|
|
18868 COMPO 1.48265 1.38100 1.52807 1.18848
|
|
18869 1.38629 1.38629 1.38629 1.38629
|
|
18870 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
18871 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
|
|
18872 1.38629 1.38629 1.38629 1.38629
|
|
18873 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18874 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
|
|
18875 1.38629 1.38629 1.38629 1.38629
|
|
18876 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18877 3 2.38910 2.82844 0.25233 2.62837 3 g - - -
|
|
18878 1.38629 1.38629 1.38629 1.38629
|
|
18879 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18880 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
|
|
18881 1.38629 1.38629 1.38629 1.38629
|
|
18882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18883 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
|
|
18884 1.38629 1.38629 1.38629 1.38629
|
|
18885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18886 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
18887 1.38629 1.38629 1.38629 1.38629
|
|
18888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18889 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
|
|
18890 1.38629 1.38629 1.38629 1.38629
|
|
18891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18892 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
18893 1.38629 1.38629 1.38629 1.38629
|
|
18894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18895 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
|
|
18896 1.38629 1.38629 1.38629 1.38629
|
|
18897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18898 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
|
|
18899 1.38629 1.38629 1.38629 1.38629
|
|
18900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18901 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
|
|
18902 1.38629 1.38629 1.38629 1.38629
|
|
18903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18904 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
18905 1.38629 1.38629 1.38629 1.38629
|
|
18906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18907 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
18908 1.38629 1.38629 1.38629 1.38629
|
|
18909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18910 14 2.31486 2.12647 2.41211 0.36768 14 t - - -
|
|
18911 1.38629 1.38629 1.38629 1.38629
|
|
18912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18913 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
|
|
18914 1.38629 1.38629 1.38629 1.38629
|
|
18915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18916 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
|
|
18917 1.38629 1.38629 1.38629 1.38629
|
|
18918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18919 17 2.31486 2.12647 2.41211 0.36768 17 t - - -
|
|
18920 1.38629 1.38629 1.38629 1.38629
|
|
18921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18922 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
18923 1.38629 1.38629 1.38629 1.38629
|
|
18924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18925 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
|
|
18926 1.38629 1.38629 1.38629 1.38629
|
|
18927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18928 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
18929 1.38629 1.38629 1.38629 1.38629
|
|
18930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18931 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
|
|
18932 1.38629 1.38629 1.38629 1.38629
|
|
18933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18934 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
|
|
18935 1.38629 1.38629 1.38629 1.38629
|
|
18936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18937 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
|
|
18938 1.38629 1.38629 1.38629 1.38629
|
|
18939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18940 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
|
|
18941 1.38629 1.38629 1.38629 1.38629
|
|
18942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18943 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
18944 1.38629 1.38629 1.38629 1.38629
|
|
18945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18946 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
18947 1.38629 1.38629 1.38629 1.38629
|
|
18948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18949 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
|
|
18950 1.38629 1.38629 1.38629 1.38629
|
|
18951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18952 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
18953 1.38629 1.38629 1.38629 1.38629
|
|
18954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18955 29 2.46232 0.33808 2.58153 2.07174 29 c - - -
|
|
18956 1.38629 1.38629 1.38629 1.38629
|
|
18957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18958 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
|
|
18959 1.38629 1.38629 1.38629 1.38629
|
|
18960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18961 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
|
|
18962 1.38629 1.38629 1.38629 1.38629
|
|
18963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18964 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
18965 1.38629 1.38629 1.38629 1.38629
|
|
18966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18967 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
|
|
18968 1.38629 1.38629 1.38629 1.38629
|
|
18969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18970 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
18971 1.38629 1.38629 1.38629 1.38629
|
|
18972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18973 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
|
|
18974 1.38629 1.38629 1.38629 1.38629
|
|
18975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18976 36 2.46232 0.33808 2.58153 2.07174 36 c - - -
|
|
18977 1.38629 1.38629 1.38629 1.38629
|
|
18978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18979 37 0.28818 2.60848 2.42319 2.42940 37 a - - -
|
|
18980 1.38629 1.38629 1.38629 1.38629
|
|
18981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18982 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
18983 1.38629 1.38629 1.38629 1.38629
|
|
18984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18985 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
|
|
18986 1.38629 1.38629 1.38629 1.38629
|
|
18987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18988 40 2.46232 0.33808 2.58153 2.07174 40 c - - -
|
|
18989 1.38629 1.38629 1.38629 1.38629
|
|
18990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18991 41 0.28818 2.60848 2.42319 2.42940 41 a - - -
|
|
18992 1.38629 1.38629 1.38629 1.38629
|
|
18993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18994 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
|
|
18995 1.38629 1.38629 1.38629 1.38629
|
|
18996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
18997 43 2.38910 2.82844 0.25233 2.62837 43 g - - -
|
|
18998 1.38629 1.38629 1.38629 1.38629
|
|
18999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19000 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
19001 1.38629 1.38629 1.38629 1.38629
|
|
19002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19003 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
|
|
19004 1.38629 1.38629 1.38629 1.38629
|
|
19005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19006 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
|
|
19007 1.38629 1.38629 1.38629 1.38629
|
|
19008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19009 47 2.31486 2.12647 2.41211 0.36768 47 t - - -
|
|
19010 1.38629 1.38629 1.38629 1.38629
|
|
19011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19012 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
|
|
19013 1.38629 1.38629 1.38629 1.38629
|
|
19014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19015 49 2.31486 2.12647 2.41211 0.36768 49 t - - -
|
|
19016 1.38629 1.38629 1.38629 1.38629
|
|
19017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19018 50 2.38910 2.82844 0.25233 2.62837 50 g - - -
|
|
19019 1.38629 1.38629 1.38629 1.38629
|
|
19020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19021 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
19022 1.38629 1.38629 1.38629 1.38629
|
|
19023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19024 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
|
|
19025 1.38629 1.38629 1.38629 1.38629
|
|
19026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19027 53 2.31486 2.12647 2.41211 0.36768 53 t - - -
|
|
19028 1.38629 1.38629 1.38629 1.38629
|
|
19029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19030 54 2.46232 0.33808 2.58153 2.07174 54 c - - -
|
|
19031 1.38629 1.38629 1.38629 1.38629
|
|
19032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19033 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
|
|
19034 1.38629 1.38629 1.38629 1.38629
|
|
19035 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19036 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
19037 1.38629 1.38629 1.38629 1.38629
|
|
19038 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19039 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
|
|
19040 1.38629 1.38629 1.38629 1.38629
|
|
19041 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19042 58 2.46232 0.33808 2.58153 2.07174 58 c - - -
|
|
19043 1.38629 1.38629 1.38629 1.38629
|
|
19044 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19045 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
|
|
19046 1.38629 1.38629 1.38629 1.38629
|
|
19047 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19048 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
|
|
19049 1.38629 1.38629 1.38629 1.38629
|
|
19050 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19051 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
19052 1.38629 1.38629 1.38629 1.38629
|
|
19053 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19054 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
|
|
19055 1.38629 1.38629 1.38629 1.38629
|
|
19056 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19057 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
|
|
19058 1.38629 1.38629 1.38629 1.38629
|
|
19059 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19060 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
19061 1.38629 1.38629 1.38629 1.38629
|
|
19062 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19063 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
|
|
19064 1.38629 1.38629 1.38629 1.38629
|
|
19065 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19066 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
19067 1.38629 1.38629 1.38629 1.38629
|
|
19068 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19069 67 0.28818 2.60848 2.42319 2.42940 67 a - - -
|
|
19070 1.38629 1.38629 1.38629 1.38629
|
|
19071 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19072 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
|
|
19073 1.38629 1.38629 1.38629 1.38629
|
|
19074 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19075 69 0.28818 2.60848 2.42319 2.42940 69 a - - -
|
|
19076 1.38629 1.38629 1.38629 1.38629
|
|
19077 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19078 70 2.38910 2.82844 0.25233 2.62837 70 g - - -
|
|
19079 1.38629 1.38629 1.38629 1.38629
|
|
19080 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
19081 //
|
|
19082 HMMER3/f [3.2.1 | June 2018]
|
|
19083 NAME long.80.aln
|
|
19084 LENG 70
|
|
19085 MAXL 160
|
|
19086 ALPH DNA
|
|
19087 RF no
|
|
19088 MM no
|
|
19089 CONS yes
|
|
19090 CS no
|
|
19091 MAP yes
|
|
19092 DATE Tue May 28 13:12:02 2019
|
|
19093 NSEQ 2
|
|
19094 EFFN 2.000000
|
|
19095 CKSUM 1911820345
|
|
19096 STATS LOCAL MSV -7.7647 0.72086
|
|
19097 STATS LOCAL VITERBI -8.9877 0.72086
|
|
19098 STATS LOCAL FORWARD -3.6995 0.72086
|
|
19099 HMM A C G T
|
|
19100 m->m m->i m->d i->m i->i d->m d->d
|
|
19101 COMPO 1.45138 1.36359 1.37796 1.35511
|
|
19102 1.38629 1.38629 1.38629 1.38629
|
|
19103 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
19104 1 2.31486 2.12647 2.41211 0.36768 1 t - - -
|
|
19105 1.38629 1.38629 1.38629 1.38629
|
|
19106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19107 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
|
|
19108 1.38629 1.38629 1.38629 1.38629
|
|
19109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19110 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
|
|
19111 1.38629 1.38629 1.38629 1.38629
|
|
19112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19113 4 2.46232 0.33808 2.58153 2.07174 4 c - - -
|
|
19114 1.38629 1.38629 1.38629 1.38629
|
|
19115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19116 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
|
|
19117 1.38629 1.38629 1.38629 1.38629
|
|
19118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19119 6 2.38910 2.82844 0.25233 2.62837 6 g - - -
|
|
19120 1.38629 1.38629 1.38629 1.38629
|
|
19121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19122 7 2.31486 2.12647 2.41211 0.36768 7 t - - -
|
|
19123 1.38629 1.38629 1.38629 1.38629
|
|
19124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19125 8 2.31486 2.12647 2.41211 0.36768 8 t - - -
|
|
19126 1.38629 1.38629 1.38629 1.38629
|
|
19127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19128 9 2.46232 0.33808 2.58153 2.07174 9 c - - -
|
|
19129 1.38629 1.38629 1.38629 1.38629
|
|
19130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19131 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
|
|
19132 1.38629 1.38629 1.38629 1.38629
|
|
19133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19134 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
|
|
19135 1.38629 1.38629 1.38629 1.38629
|
|
19136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19137 12 2.38910 2.82844 0.25233 2.62837 12 g - - -
|
|
19138 1.38629 1.38629 1.38629 1.38629
|
|
19139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19140 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
|
|
19141 1.38629 1.38629 1.38629 1.38629
|
|
19142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19143 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
|
|
19144 1.38629 1.38629 1.38629 1.38629
|
|
19145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19146 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
|
|
19147 1.38629 1.38629 1.38629 1.38629
|
|
19148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19149 16 2.46232 0.33808 2.58153 2.07174 16 c - - -
|
|
19150 1.38629 1.38629 1.38629 1.38629
|
|
19151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19152 17 0.28818 2.60848 2.42319 2.42940 17 a - - -
|
|
19153 1.38629 1.38629 1.38629 1.38629
|
|
19154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19155 18 2.46232 0.33808 2.58153 2.07174 18 c - - -
|
|
19156 1.38629 1.38629 1.38629 1.38629
|
|
19157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19158 19 2.31486 2.12647 2.41211 0.36768 19 t - - -
|
|
19159 1.38629 1.38629 1.38629 1.38629
|
|
19160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19161 20 2.38910 2.82844 0.25233 2.62837 20 g - - -
|
|
19162 1.38629 1.38629 1.38629 1.38629
|
|
19163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19164 21 2.46232 0.33808 2.58153 2.07174 21 c - - -
|
|
19165 1.38629 1.38629 1.38629 1.38629
|
|
19166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19167 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
|
|
19168 1.38629 1.38629 1.38629 1.38629
|
|
19169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19170 23 0.28818 2.60848 2.42319 2.42940 23 a - - -
|
|
19171 1.38629 1.38629 1.38629 1.38629
|
|
19172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19173 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
|
|
19174 1.38629 1.38629 1.38629 1.38629
|
|
19175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19176 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
|
|
19177 1.38629 1.38629 1.38629 1.38629
|
|
19178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19179 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
|
|
19180 1.38629 1.38629 1.38629 1.38629
|
|
19181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19182 27 0.28818 2.60848 2.42319 2.42940 27 a - - -
|
|
19183 1.38629 1.38629 1.38629 1.38629
|
|
19184 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19185 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
19186 1.38629 1.38629 1.38629 1.38629
|
|
19187 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19188 29 2.31486 2.12647 2.41211 0.36768 29 t - - -
|
|
19189 1.38629 1.38629 1.38629 1.38629
|
|
19190 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19191 30 2.31486 2.12647 2.41211 0.36768 30 t - - -
|
|
19192 1.38629 1.38629 1.38629 1.38629
|
|
19193 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19194 31 2.31486 2.12647 2.41211 0.36768 31 t - - -
|
|
19195 1.38629 1.38629 1.38629 1.38629
|
|
19196 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19197 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
|
|
19198 1.38629 1.38629 1.38629 1.38629
|
|
19199 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19200 33 2.46232 0.33808 2.58153 2.07174 33 c - - -
|
|
19201 1.38629 1.38629 1.38629 1.38629
|
|
19202 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19203 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
19204 1.38629 1.38629 1.38629 1.38629
|
|
19205 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19206 35 2.46232 0.33808 2.58153 2.07174 35 c - - -
|
|
19207 1.38629 1.38629 1.38629 1.38629
|
|
19208 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19209 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
|
|
19210 1.38629 1.38629 1.38629 1.38629
|
|
19211 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19212 37 2.46232 0.33808 2.58153 2.07174 37 c - - -
|
|
19213 1.38629 1.38629 1.38629 1.38629
|
|
19214 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19215 38 2.31486 2.12647 2.41211 0.36768 38 t - - -
|
|
19216 1.38629 1.38629 1.38629 1.38629
|
|
19217 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19218 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
|
|
19219 1.38629 1.38629 1.38629 1.38629
|
|
19220 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19221 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
19222 1.38629 1.38629 1.38629 1.38629
|
|
19223 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19224 41 2.46232 0.33808 2.58153 2.07174 41 c - - -
|
|
19225 1.38629 1.38629 1.38629 1.38629
|
|
19226 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19227 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
|
|
19228 1.38629 1.38629 1.38629 1.38629
|
|
19229 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19230 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
19231 1.38629 1.38629 1.38629 1.38629
|
|
19232 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19233 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
|
|
19234 1.38629 1.38629 1.38629 1.38629
|
|
19235 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19236 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
19237 1.38629 1.38629 1.38629 1.38629
|
|
19238 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19239 46 0.28818 2.60848 2.42319 2.42940 46 a - - -
|
|
19240 1.38629 1.38629 1.38629 1.38629
|
|
19241 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19242 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
|
|
19243 1.38629 1.38629 1.38629 1.38629
|
|
19244 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19245 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
|
|
19246 1.38629 1.38629 1.38629 1.38629
|
|
19247 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19248 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
|
|
19249 1.38629 1.38629 1.38629 1.38629
|
|
19250 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19251 50 2.31486 2.12647 2.41211 0.36768 50 t - - -
|
|
19252 1.38629 1.38629 1.38629 1.38629
|
|
19253 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19254 51 2.46232 0.33808 2.58153 2.07174 51 c - - -
|
|
19255 1.38629 1.38629 1.38629 1.38629
|
|
19256 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19257 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
|
|
19258 1.38629 1.38629 1.38629 1.38629
|
|
19259 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19260 53 2.38910 2.82844 0.25233 2.62837 53 g - - -
|
|
19261 1.38629 1.38629 1.38629 1.38629
|
|
19262 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19263 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
19264 1.38629 1.38629 1.38629 1.38629
|
|
19265 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19266 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
|
|
19267 1.38629 1.38629 1.38629 1.38629
|
|
19268 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19269 56 2.38910 2.82844 0.25233 2.62837 56 g - - -
|
|
19270 1.38629 1.38629 1.38629 1.38629
|
|
19271 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19272 57 2.38910 2.82844 0.25233 2.62837 57 g - - -
|
|
19273 1.38629 1.38629 1.38629 1.38629
|
|
19274 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19275 58 0.28818 2.60848 2.42319 2.42940 58 a - - -
|
|
19276 1.38629 1.38629 1.38629 1.38629
|
|
19277 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19278 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
|
|
19279 1.38629 1.38629 1.38629 1.38629
|
|
19280 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19281 60 2.46232 0.33808 2.58153 2.07174 60 c - - -
|
|
19282 1.38629 1.38629 1.38629 1.38629
|
|
19283 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19284 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
19285 1.38629 1.38629 1.38629 1.38629
|
|
19286 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19287 62 2.46232 0.33808 2.58153 2.07174 62 c - - -
|
|
19288 1.38629 1.38629 1.38629 1.38629
|
|
19289 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19290 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
|
|
19291 1.38629 1.38629 1.38629 1.38629
|
|
19292 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19293 64 0.28818 2.60848 2.42319 2.42940 64 a - - -
|
|
19294 1.38629 1.38629 1.38629 1.38629
|
|
19295 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19296 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
|
|
19297 1.38629 1.38629 1.38629 1.38629
|
|
19298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19299 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
19300 1.38629 1.38629 1.38629 1.38629
|
|
19301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19302 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
19303 1.38629 1.38629 1.38629 1.38629
|
|
19304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19305 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
|
|
19306 1.38629 1.38629 1.38629 1.38629
|
|
19307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19308 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
|
|
19309 1.38629 1.38629 1.38629 1.38629
|
|
19310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19311 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
|
|
19312 1.38629 1.38629 1.38629 1.38629
|
|
19313 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
19314 //
|
|
19315 HMMER3/f [3.2.1 | June 2018]
|
|
19316 NAME long.81.aln
|
|
19317 LENG 70
|
|
19318 MAXL 160
|
|
19319 ALPH DNA
|
|
19320 RF no
|
|
19321 MM no
|
|
19322 CONS yes
|
|
19323 CS no
|
|
19324 MAP yes
|
|
19325 DATE Tue May 28 13:12:02 2019
|
|
19326 NSEQ 2
|
|
19327 EFFN 2.000000
|
|
19328 CKSUM 2860632243
|
|
19329 STATS LOCAL MSV -7.8884 0.71997
|
|
19330 STATS LOCAL VITERBI -9.2337 0.71997
|
|
19331 STATS LOCAL FORWARD -3.7511 0.71997
|
|
19332 HMM A C G T
|
|
19333 m->m m->i m->d i->m i->i d->m d->d
|
|
19334 COMPO 1.14114 1.63705 1.30427 1.53889
|
|
19335 1.38629 1.38629 1.38629 1.38629
|
|
19336 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
19337 1 2.38910 2.82844 0.25233 2.62837 1 g - - -
|
|
19338 1.38629 1.38629 1.38629 1.38629
|
|
19339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19340 2 2.46232 0.33808 2.58153 2.07174 2 c - - -
|
|
19341 1.38629 1.38629 1.38629 1.38629
|
|
19342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19343 3 2.46232 0.33808 2.58153 2.07174 3 c - - -
|
|
19344 1.38629 1.38629 1.38629 1.38629
|
|
19345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19346 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
|
|
19347 1.38629 1.38629 1.38629 1.38629
|
|
19348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19349 5 2.46232 0.33808 2.58153 2.07174 5 c - - -
|
|
19350 1.38629 1.38629 1.38629 1.38629
|
|
19351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19352 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
|
|
19353 1.38629 1.38629 1.38629 1.38629
|
|
19354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19355 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
|
|
19356 1.38629 1.38629 1.38629 1.38629
|
|
19357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19358 8 0.28818 2.60848 2.42319 2.42940 8 a - - -
|
|
19359 1.38629 1.38629 1.38629 1.38629
|
|
19360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19361 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
|
|
19362 1.38629 1.38629 1.38629 1.38629
|
|
19363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19364 10 2.38910 2.82844 0.25233 2.62837 10 g - - -
|
|
19365 1.38629 1.38629 1.38629 1.38629
|
|
19366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19367 11 2.38910 2.82844 0.25233 2.62837 11 g - - -
|
|
19368 1.38629 1.38629 1.38629 1.38629
|
|
19369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19370 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
19371 1.38629 1.38629 1.38629 1.38629
|
|
19372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19373 13 2.38910 2.82844 0.25233 2.62837 13 g - - -
|
|
19374 1.38629 1.38629 1.38629 1.38629
|
|
19375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19376 14 2.46232 0.33808 2.58153 2.07174 14 c - - -
|
|
19377 1.38629 1.38629 1.38629 1.38629
|
|
19378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19379 15 2.46232 0.33808 2.58153 2.07174 15 c - - -
|
|
19380 1.38629 1.38629 1.38629 1.38629
|
|
19381 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19382 16 0.28818 2.60848 2.42319 2.42940 16 a - - -
|
|
19383 1.38629 1.38629 1.38629 1.38629
|
|
19384 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19385 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
|
|
19386 1.38629 1.38629 1.38629 1.38629
|
|
19387 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19388 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
19389 1.38629 1.38629 1.38629 1.38629
|
|
19390 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19391 19 2.46232 0.33808 2.58153 2.07174 19 c - - -
|
|
19392 1.38629 1.38629 1.38629 1.38629
|
|
19393 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19394 20 0.28818 2.60848 2.42319 2.42940 20 a - - -
|
|
19395 1.38629 1.38629 1.38629 1.38629
|
|
19396 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19397 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
19398 1.38629 1.38629 1.38629 1.38629
|
|
19399 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19400 22 2.31486 2.12647 2.41211 0.36768 22 t - - -
|
|
19401 1.38629 1.38629 1.38629 1.38629
|
|
19402 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19403 23 2.38910 2.82844 0.25233 2.62837 23 g - - -
|
|
19404 1.38629 1.38629 1.38629 1.38629
|
|
19405 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19406 24 0.28818 2.60848 2.42319 2.42940 24 a - - -
|
|
19407 1.38629 1.38629 1.38629 1.38629
|
|
19408 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19409 25 0.28818 2.60848 2.42319 2.42940 25 a - - -
|
|
19410 1.38629 1.38629 1.38629 1.38629
|
|
19411 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19412 26 2.31486 2.12647 2.41211 0.36768 26 t - - -
|
|
19413 1.38629 1.38629 1.38629 1.38629
|
|
19414 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19415 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
|
|
19416 1.38629 1.38629 1.38629 1.38629
|
|
19417 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19418 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
|
|
19419 1.38629 1.38629 1.38629 1.38629
|
|
19420 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19421 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
|
|
19422 1.38629 1.38629 1.38629 1.38629
|
|
19423 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19424 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
|
|
19425 1.38629 1.38629 1.38629 1.38629
|
|
19426 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19427 31 0.28818 2.60848 2.42319 2.42940 31 a - - -
|
|
19428 1.38629 1.38629 1.38629 1.38629
|
|
19429 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19430 32 2.46232 0.33808 2.58153 2.07174 32 c - - -
|
|
19431 1.38629 1.38629 1.38629 1.38629
|
|
19432 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19433 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
19434 1.38629 1.38629 1.38629 1.38629
|
|
19435 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19436 34 0.28818 2.60848 2.42319 2.42940 34 a - - -
|
|
19437 1.38629 1.38629 1.38629 1.38629
|
|
19438 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19439 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
19440 1.38629 1.38629 1.38629 1.38629
|
|
19441 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19442 36 0.28818 2.60848 2.42319 2.42940 36 a - - -
|
|
19443 1.38629 1.38629 1.38629 1.38629
|
|
19444 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19445 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
|
|
19446 1.38629 1.38629 1.38629 1.38629
|
|
19447 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19448 38 2.46232 0.33808 2.58153 2.07174 38 c - - -
|
|
19449 1.38629 1.38629 1.38629 1.38629
|
|
19450 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19451 39 2.31486 2.12647 2.41211 0.36768 39 t - - -
|
|
19452 1.38629 1.38629 1.38629 1.38629
|
|
19453 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19454 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
19455 1.38629 1.38629 1.38629 1.38629
|
|
19456 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19457 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
19458 1.38629 1.38629 1.38629 1.38629
|
|
19459 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19460 42 2.31486 2.12647 2.41211 0.36768 42 t - - -
|
|
19461 1.38629 1.38629 1.38629 1.38629
|
|
19462 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19463 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
19464 1.38629 1.38629 1.38629 1.38629
|
|
19465 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19466 44 2.38910 2.82844 0.25233 2.62837 44 g - - -
|
|
19467 1.38629 1.38629 1.38629 1.38629
|
|
19468 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19469 45 0.28818 2.60848 2.42319 2.42940 45 a - - -
|
|
19470 1.38629 1.38629 1.38629 1.38629
|
|
19471 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19472 46 2.38910 2.82844 0.25233 2.62837 46 g - - -
|
|
19473 1.38629 1.38629 1.38629 1.38629
|
|
19474 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19475 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
|
|
19476 1.38629 1.38629 1.38629 1.38629
|
|
19477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19478 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
|
|
19479 1.38629 1.38629 1.38629 1.38629
|
|
19480 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19481 49 2.38910 2.82844 0.25233 2.62837 49 g - - -
|
|
19482 1.38629 1.38629 1.38629 1.38629
|
|
19483 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19484 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
|
|
19485 1.38629 1.38629 1.38629 1.38629
|
|
19486 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19487 51 2.31486 2.12647 2.41211 0.36768 51 t - - -
|
|
19488 1.38629 1.38629 1.38629 1.38629
|
|
19489 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19490 52 2.31486 2.12647 2.41211 0.36768 52 t - - -
|
|
19491 1.38629 1.38629 1.38629 1.38629
|
|
19492 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19493 53 0.28818 2.60848 2.42319 2.42940 53 a - - -
|
|
19494 1.38629 1.38629 1.38629 1.38629
|
|
19495 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19496 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
19497 1.38629 1.38629 1.38629 1.38629
|
|
19498 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19499 55 2.38910 2.82844 0.25233 2.62837 55 g - - -
|
|
19500 1.38629 1.38629 1.38629 1.38629
|
|
19501 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19502 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
19503 1.38629 1.38629 1.38629 1.38629
|
|
19504 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19505 57 0.28818 2.60848 2.42319 2.42940 57 a - - -
|
|
19506 1.38629 1.38629 1.38629 1.38629
|
|
19507 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19508 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
|
|
19509 1.38629 1.38629 1.38629 1.38629
|
|
19510 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19511 59 2.38910 2.82844 0.25233 2.62837 59 g - - -
|
|
19512 1.38629 1.38629 1.38629 1.38629
|
|
19513 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19514 60 0.28818 2.60848 2.42319 2.42940 60 a - - -
|
|
19515 1.38629 1.38629 1.38629 1.38629
|
|
19516 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19517 61 0.28818 2.60848 2.42319 2.42940 61 a - - -
|
|
19518 1.38629 1.38629 1.38629 1.38629
|
|
19519 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19520 62 2.38910 2.82844 0.25233 2.62837 62 g - - -
|
|
19521 1.38629 1.38629 1.38629 1.38629
|
|
19522 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19523 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
|
|
19524 1.38629 1.38629 1.38629 1.38629
|
|
19525 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19526 64 2.31486 2.12647 2.41211 0.36768 64 t - - -
|
|
19527 1.38629 1.38629 1.38629 1.38629
|
|
19528 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19529 65 2.38910 2.82844 0.25233 2.62837 65 g - - -
|
|
19530 1.38629 1.38629 1.38629 1.38629
|
|
19531 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19532 66 2.31486 2.12647 2.41211 0.36768 66 t - - -
|
|
19533 1.38629 1.38629 1.38629 1.38629
|
|
19534 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19535 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
19536 1.38629 1.38629 1.38629 1.38629
|
|
19537 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19538 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
|
|
19539 1.38629 1.38629 1.38629 1.38629
|
|
19540 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19541 69 2.38910 2.82844 0.25233 2.62837 69 g - - -
|
|
19542 1.38629 1.38629 1.38629 1.38629
|
|
19543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19544 70 0.28818 2.60848 2.42319 2.42940 70 a - - -
|
|
19545 1.38629 1.38629 1.38629 1.38629
|
|
19546 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
19547 //
|
|
19548 HMMER3/f [3.2.1 | June 2018]
|
|
19549 NAME long.82.aln
|
|
19550 LENG 70
|
|
19551 MAXL 160
|
|
19552 ALPH DNA
|
|
19553 RF no
|
|
19554 MM no
|
|
19555 CONS yes
|
|
19556 CS no
|
|
19557 MAP yes
|
|
19558 DATE Tue May 28 13:12:02 2019
|
|
19559 NSEQ 2
|
|
19560 EFFN 2.000000
|
|
19561 CKSUM 2621139853
|
|
19562 STATS LOCAL MSV -7.9800 0.72086
|
|
19563 STATS LOCAL VITERBI -9.2405 0.72086
|
|
19564 STATS LOCAL FORWARD -3.6067 0.72086
|
|
19565 HMM A C G T
|
|
19566 m->m m->i m->d i->m i->i d->m d->d
|
|
19567 COMPO 1.37943 1.39613 1.41270 1.35774
|
|
19568 1.38629 1.38629 1.38629 1.38629
|
|
19569 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
19570 1 2.46232 0.33808 2.58153 2.07174 1 c - - -
|
|
19571 1.38629 1.38629 1.38629 1.38629
|
|
19572 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19573 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
|
|
19574 1.38629 1.38629 1.38629 1.38629
|
|
19575 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19576 3 2.38910 2.82844 0.25233 2.62837 3 g - - -
|
|
19577 1.38629 1.38629 1.38629 1.38629
|
|
19578 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19579 4 0.28818 2.60848 2.42319 2.42940 4 a - - -
|
|
19580 1.38629 1.38629 1.38629 1.38629
|
|
19581 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19582 5 2.31486 2.12647 2.41211 0.36768 5 t - - -
|
|
19583 1.38629 1.38629 1.38629 1.38629
|
|
19584 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19585 6 0.28818 2.60848 2.42319 2.42940 6 a - - -
|
|
19586 1.38629 1.38629 1.38629 1.38629
|
|
19587 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19588 7 2.46232 0.33808 2.58153 2.07174 7 c - - -
|
|
19589 1.38629 1.38629 1.38629 1.38629
|
|
19590 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19591 8 2.46232 0.33808 2.58153 2.07174 8 c - - -
|
|
19592 1.38629 1.38629 1.38629 1.38629
|
|
19593 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19594 9 2.31486 2.12647 2.41211 0.36768 9 t - - -
|
|
19595 1.38629 1.38629 1.38629 1.38629
|
|
19596 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19597 10 0.28818 2.60848 2.42319 2.42940 10 a - - -
|
|
19598 1.38629 1.38629 1.38629 1.38629
|
|
19599 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19600 11 0.28818 2.60848 2.42319 2.42940 11 a - - -
|
|
19601 1.38629 1.38629 1.38629 1.38629
|
|
19602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19603 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
19604 1.38629 1.38629 1.38629 1.38629
|
|
19605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19606 13 2.31486 2.12647 2.41211 0.36768 13 t - - -
|
|
19607 1.38629 1.38629 1.38629 1.38629
|
|
19608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19609 14 2.38910 2.82844 0.25233 2.62837 14 g - - -
|
|
19610 1.38629 1.38629 1.38629 1.38629
|
|
19611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19612 15 0.28818 2.60848 2.42319 2.42940 15 a - - -
|
|
19613 1.38629 1.38629 1.38629 1.38629
|
|
19614 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19615 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
|
|
19616 1.38629 1.38629 1.38629 1.38629
|
|
19617 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19618 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
|
|
19619 1.38629 1.38629 1.38629 1.38629
|
|
19620 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19621 18 0.28818 2.60848 2.42319 2.42940 18 a - - -
|
|
19622 1.38629 1.38629 1.38629 1.38629
|
|
19623 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19624 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
|
|
19625 1.38629 1.38629 1.38629 1.38629
|
|
19626 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19627 20 2.46232 0.33808 2.58153 2.07174 20 c - - -
|
|
19628 1.38629 1.38629 1.38629 1.38629
|
|
19629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19630 21 0.28818 2.60848 2.42319 2.42940 21 a - - -
|
|
19631 1.38629 1.38629 1.38629 1.38629
|
|
19632 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19633 22 2.38910 2.82844 0.25233 2.62837 22 g - - -
|
|
19634 1.38629 1.38629 1.38629 1.38629
|
|
19635 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19636 23 2.46232 0.33808 2.58153 2.07174 23 c - - -
|
|
19637 1.38629 1.38629 1.38629 1.38629
|
|
19638 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19639 24 2.31486 2.12647 2.41211 0.36768 24 t - - -
|
|
19640 1.38629 1.38629 1.38629 1.38629
|
|
19641 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19642 25 2.46232 0.33808 2.58153 2.07174 25 c - - -
|
|
19643 1.38629 1.38629 1.38629 1.38629
|
|
19644 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19645 26 2.46232 0.33808 2.58153 2.07174 26 c - - -
|
|
19646 1.38629 1.38629 1.38629 1.38629
|
|
19647 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19648 27 2.31486 2.12647 2.41211 0.36768 27 t - - -
|
|
19649 1.38629 1.38629 1.38629 1.38629
|
|
19650 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19651 28 2.38910 2.82844 0.25233 2.62837 28 g - - -
|
|
19652 1.38629 1.38629 1.38629 1.38629
|
|
19653 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19654 29 2.38910 2.82844 0.25233 2.62837 29 g - - -
|
|
19655 1.38629 1.38629 1.38629 1.38629
|
|
19656 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19657 30 2.38910 2.82844 0.25233 2.62837 30 g - - -
|
|
19658 1.38629 1.38629 1.38629 1.38629
|
|
19659 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19660 31 2.38910 2.82844 0.25233 2.62837 31 g - - -
|
|
19661 1.38629 1.38629 1.38629 1.38629
|
|
19662 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19663 32 0.28818 2.60848 2.42319 2.42940 32 a - - -
|
|
19664 1.38629 1.38629 1.38629 1.38629
|
|
19665 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19666 33 2.31486 2.12647 2.41211 0.36768 33 t - - -
|
|
19667 1.38629 1.38629 1.38629 1.38629
|
|
19668 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19669 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
19670 1.38629 1.38629 1.38629 1.38629
|
|
19671 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19672 35 2.31486 2.12647 2.41211 0.36768 35 t - - -
|
|
19673 1.38629 1.38629 1.38629 1.38629
|
|
19674 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19675 36 2.38910 2.82844 0.25233 2.62837 36 g - - -
|
|
19676 1.38629 1.38629 1.38629 1.38629
|
|
19677 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19678 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
|
|
19679 1.38629 1.38629 1.38629 1.38629
|
|
19680 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19681 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
|
|
19682 1.38629 1.38629 1.38629 1.38629
|
|
19683 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19684 39 2.38910 2.82844 0.25233 2.62837 39 g - - -
|
|
19685 1.38629 1.38629 1.38629 1.38629
|
|
19686 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19687 40 2.31486 2.12647 2.41211 0.36768 40 t - - -
|
|
19688 1.38629 1.38629 1.38629 1.38629
|
|
19689 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19690 41 2.31486 2.12647 2.41211 0.36768 41 t - - -
|
|
19691 1.38629 1.38629 1.38629 1.38629
|
|
19692 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19693 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
|
|
19694 1.38629 1.38629 1.38629 1.38629
|
|
19695 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19696 43 2.46232 0.33808 2.58153 2.07174 43 c - - -
|
|
19697 1.38629 1.38629 1.38629 1.38629
|
|
19698 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19699 44 2.31486 2.12647 2.41211 0.36768 44 t - - -
|
|
19700 1.38629 1.38629 1.38629 1.38629
|
|
19701 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19702 45 2.46232 0.33808 2.58153 2.07174 45 c - - -
|
|
19703 1.38629 1.38629 1.38629 1.38629
|
|
19704 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19705 46 2.31486 2.12647 2.41211 0.36768 46 t - - -
|
|
19706 1.38629 1.38629 1.38629 1.38629
|
|
19707 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19708 47 2.38910 2.82844 0.25233 2.62837 47 g - - -
|
|
19709 1.38629 1.38629 1.38629 1.38629
|
|
19710 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19711 48 2.38910 2.82844 0.25233 2.62837 48 g - - -
|
|
19712 1.38629 1.38629 1.38629 1.38629
|
|
19713 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19714 49 0.28818 2.60848 2.42319 2.42940 49 a - - -
|
|
19715 1.38629 1.38629 1.38629 1.38629
|
|
19716 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19717 50 0.28818 2.60848 2.42319 2.42940 50 a - - -
|
|
19718 1.38629 1.38629 1.38629 1.38629
|
|
19719 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19720 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
19721 1.38629 1.38629 1.38629 1.38629
|
|
19722 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19723 52 0.28818 2.60848 2.42319 2.42940 52 a - - -
|
|
19724 1.38629 1.38629 1.38629 1.38629
|
|
19725 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19726 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
|
|
19727 1.38629 1.38629 1.38629 1.38629
|
|
19728 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19729 54 2.31486 2.12647 2.41211 0.36768 54 t - - -
|
|
19730 1.38629 1.38629 1.38629 1.38629
|
|
19731 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19732 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
|
|
19733 1.38629 1.38629 1.38629 1.38629
|
|
19734 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19735 56 0.28818 2.60848 2.42319 2.42940 56 a - - -
|
|
19736 1.38629 1.38629 1.38629 1.38629
|
|
19737 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19738 57 2.31486 2.12647 2.41211 0.36768 57 t - - -
|
|
19739 1.38629 1.38629 1.38629 1.38629
|
|
19740 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19741 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
|
|
19742 1.38629 1.38629 1.38629 1.38629
|
|
19743 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19744 59 2.31486 2.12647 2.41211 0.36768 59 t - - -
|
|
19745 1.38629 1.38629 1.38629 1.38629
|
|
19746 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19747 60 2.38910 2.82844 0.25233 2.62837 60 g - - -
|
|
19748 1.38629 1.38629 1.38629 1.38629
|
|
19749 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19750 61 2.46232 0.33808 2.58153 2.07174 61 c - - -
|
|
19751 1.38629 1.38629 1.38629 1.38629
|
|
19752 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19753 62 0.28818 2.60848 2.42319 2.42940 62 a - - -
|
|
19754 1.38629 1.38629 1.38629 1.38629
|
|
19755 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19756 63 2.46232 0.33808 2.58153 2.07174 63 c - - -
|
|
19757 1.38629 1.38629 1.38629 1.38629
|
|
19758 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19759 64 2.46232 0.33808 2.58153 2.07174 64 c - - -
|
|
19760 1.38629 1.38629 1.38629 1.38629
|
|
19761 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19762 65 2.46232 0.33808 2.58153 2.07174 65 c - - -
|
|
19763 1.38629 1.38629 1.38629 1.38629
|
|
19764 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19765 66 2.46232 0.33808 2.58153 2.07174 66 c - - -
|
|
19766 1.38629 1.38629 1.38629 1.38629
|
|
19767 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19768 67 2.31486 2.12647 2.41211 0.36768 67 t - - -
|
|
19769 1.38629 1.38629 1.38629 1.38629
|
|
19770 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19771 68 2.38910 2.82844 0.25233 2.62837 68 g - - -
|
|
19772 1.38629 1.38629 1.38629 1.38629
|
|
19773 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19774 69 2.46232 0.33808 2.58153 2.07174 69 c - - -
|
|
19775 1.38629 1.38629 1.38629 1.38629
|
|
19776 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19777 70 2.31486 2.12647 2.41211 0.36768 70 t - - -
|
|
19778 1.38629 1.38629 1.38629 1.38629
|
|
19779 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
19780 //
|
|
19781 HMMER3/f [3.2.1 | June 2018]
|
|
19782 NAME long.83.aln
|
|
19783 LENG 70
|
|
19784 MAXL 160
|
|
19785 ALPH DNA
|
|
19786 RF no
|
|
19787 MM no
|
|
19788 CONS yes
|
|
19789 CS no
|
|
19790 MAP yes
|
|
19791 DATE Tue May 28 13:12:02 2019
|
|
19792 NSEQ 2
|
|
19793 EFFN 2.000000
|
|
19794 CKSUM 2205547240
|
|
19795 STATS LOCAL MSV -8.0191 0.72077
|
|
19796 STATS LOCAL VITERBI -9.1398 0.72077
|
|
19797 STATS LOCAL FORWARD -3.4631 0.72077
|
|
19798 HMM A C G T
|
|
19799 m->m m->i m->d i->m i->i d->m d->d
|
|
19800 COMPO 1.41098 1.49972 1.34037 1.30507
|
|
19801 1.38629 1.38629 1.38629 1.38629
|
|
19802 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
19803 1 0.28818 2.60848 2.42319 2.42940 1 a - - -
|
|
19804 1.38629 1.38629 1.38629 1.38629
|
|
19805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19806 2 0.28818 2.60848 2.42319 2.42940 2 a - - -
|
|
19807 1.38629 1.38629 1.38629 1.38629
|
|
19808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19809 3 2.31486 2.12647 2.41211 0.36768 3 t - - -
|
|
19810 1.38629 1.38629 1.38629 1.38629
|
|
19811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19812 4 2.31486 2.12647 2.41211 0.36768 4 t - - -
|
|
19813 1.38629 1.38629 1.38629 1.38629
|
|
19814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19815 5 2.38910 2.82844 0.25233 2.62837 5 g - - -
|
|
19816 1.38629 1.38629 1.38629 1.38629
|
|
19817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19818 6 2.31486 2.12647 2.41211 0.36768 6 t - - -
|
|
19819 1.38629 1.38629 1.38629 1.38629
|
|
19820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19821 7 2.38910 2.82844 0.25233 2.62837 7 g - - -
|
|
19822 1.38629 1.38629 1.38629 1.38629
|
|
19823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19824 8 2.38910 2.82844 0.25233 2.62837 8 g - - -
|
|
19825 1.38629 1.38629 1.38629 1.38629
|
|
19826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19827 9 2.38910 2.82844 0.25233 2.62837 9 g - - -
|
|
19828 1.38629 1.38629 1.38629 1.38629
|
|
19829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19830 10 2.31486 2.12647 2.41211 0.36768 10 t - - -
|
|
19831 1.38629 1.38629 1.38629 1.38629
|
|
19832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19833 11 2.46232 0.33808 2.58153 2.07174 11 c - - -
|
|
19834 1.38629 1.38629 1.38629 1.38629
|
|
19835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19836 12 0.28818 2.60848 2.42319 2.42940 12 a - - -
|
|
19837 1.38629 1.38629 1.38629 1.38629
|
|
19838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19839 13 2.46232 0.33808 2.58153 2.07174 13 c - - -
|
|
19840 1.38629 1.38629 1.38629 1.38629
|
|
19841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19842 14 0.28818 2.60848 2.42319 2.42940 14 a - - -
|
|
19843 1.38629 1.38629 1.38629 1.38629
|
|
19844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19845 15 2.38910 2.82844 0.25233 2.62837 15 g - - -
|
|
19846 1.38629 1.38629 1.38629 1.38629
|
|
19847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19848 16 2.31486 2.12647 2.41211 0.36768 16 t - - -
|
|
19849 1.38629 1.38629 1.38629 1.38629
|
|
19850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19851 17 2.46232 0.33808 2.58153 2.07174 17 c - - -
|
|
19852 1.38629 1.38629 1.38629 1.38629
|
|
19853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19854 18 2.31486 2.12647 2.41211 0.36768 18 t - - -
|
|
19855 1.38629 1.38629 1.38629 1.38629
|
|
19856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19857 19 0.28818 2.60848 2.42319 2.42940 19 a - - -
|
|
19858 1.38629 1.38629 1.38629 1.38629
|
|
19859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19860 20 2.31486 2.12647 2.41211 0.36768 20 t - - -
|
|
19861 1.38629 1.38629 1.38629 1.38629
|
|
19862 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19863 21 2.31486 2.12647 2.41211 0.36768 21 t - - -
|
|
19864 1.38629 1.38629 1.38629 1.38629
|
|
19865 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19866 22 0.28818 2.60848 2.42319 2.42940 22 a - - -
|
|
19867 1.38629 1.38629 1.38629 1.38629
|
|
19868 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19869 23 2.31486 2.12647 2.41211 0.36768 23 t - - -
|
|
19870 1.38629 1.38629 1.38629 1.38629
|
|
19871 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19872 24 2.38910 2.82844 0.25233 2.62837 24 g - - -
|
|
19873 1.38629 1.38629 1.38629 1.38629
|
|
19874 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19875 25 2.38910 2.82844 0.25233 2.62837 25 g - - -
|
|
19876 1.38629 1.38629 1.38629 1.38629
|
|
19877 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19878 26 2.38910 2.82844 0.25233 2.62837 26 g - - -
|
|
19879 1.38629 1.38629 1.38629 1.38629
|
|
19880 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19881 27 2.38910 2.82844 0.25233 2.62837 27 g - - -
|
|
19882 1.38629 1.38629 1.38629 1.38629
|
|
19883 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19884 28 2.31486 2.12647 2.41211 0.36768 28 t - - -
|
|
19885 1.38629 1.38629 1.38629 1.38629
|
|
19886 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19887 29 0.28818 2.60848 2.42319 2.42940 29 a - - -
|
|
19888 1.38629 1.38629 1.38629 1.38629
|
|
19889 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19890 30 2.46232 0.33808 2.58153 2.07174 30 c - - -
|
|
19891 1.38629 1.38629 1.38629 1.38629
|
|
19892 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19893 31 2.46232 0.33808 2.58153 2.07174 31 c - - -
|
|
19894 1.38629 1.38629 1.38629 1.38629
|
|
19895 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19896 32 2.31486 2.12647 2.41211 0.36768 32 t - - -
|
|
19897 1.38629 1.38629 1.38629 1.38629
|
|
19898 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19899 33 2.38910 2.82844 0.25233 2.62837 33 g - - -
|
|
19900 1.38629 1.38629 1.38629 1.38629
|
|
19901 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19902 34 2.31486 2.12647 2.41211 0.36768 34 t - - -
|
|
19903 1.38629 1.38629 1.38629 1.38629
|
|
19904 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19905 35 2.38910 2.82844 0.25233 2.62837 35 g - - -
|
|
19906 1.38629 1.38629 1.38629 1.38629
|
|
19907 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19908 36 2.31486 2.12647 2.41211 0.36768 36 t - - -
|
|
19909 1.38629 1.38629 1.38629 1.38629
|
|
19910 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19911 37 2.38910 2.82844 0.25233 2.62837 37 g - - -
|
|
19912 1.38629 1.38629 1.38629 1.38629
|
|
19913 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19914 38 2.38910 2.82844 0.25233 2.62837 38 g - - -
|
|
19915 1.38629 1.38629 1.38629 1.38629
|
|
19916 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19917 39 2.46232 0.33808 2.58153 2.07174 39 c - - -
|
|
19918 1.38629 1.38629 1.38629 1.38629
|
|
19919 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19920 40 0.28818 2.60848 2.42319 2.42940 40 a - - -
|
|
19921 1.38629 1.38629 1.38629 1.38629
|
|
19922 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19923 41 2.38910 2.82844 0.25233 2.62837 41 g - - -
|
|
19924 1.38629 1.38629 1.38629 1.38629
|
|
19925 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19926 42 2.38910 2.82844 0.25233 2.62837 42 g - - -
|
|
19927 1.38629 1.38629 1.38629 1.38629
|
|
19928 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19929 43 0.28818 2.60848 2.42319 2.42940 43 a - - -
|
|
19930 1.38629 1.38629 1.38629 1.38629
|
|
19931 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19932 44 0.28818 2.60848 2.42319 2.42940 44 a - - -
|
|
19933 1.38629 1.38629 1.38629 1.38629
|
|
19934 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19935 45 2.38910 2.82844 0.25233 2.62837 45 g - - -
|
|
19936 1.38629 1.38629 1.38629 1.38629
|
|
19937 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19938 46 2.46232 0.33808 2.58153 2.07174 46 c - - -
|
|
19939 1.38629 1.38629 1.38629 1.38629
|
|
19940 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19941 47 0.28818 2.60848 2.42319 2.42940 47 a - - -
|
|
19942 1.38629 1.38629 1.38629 1.38629
|
|
19943 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19944 48 0.28818 2.60848 2.42319 2.42940 48 a - - -
|
|
19945 1.38629 1.38629 1.38629 1.38629
|
|
19946 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19947 49 2.46232 0.33808 2.58153 2.07174 49 c - - -
|
|
19948 1.38629 1.38629 1.38629 1.38629
|
|
19949 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19950 50 2.46232 0.33808 2.58153 2.07174 50 c - - -
|
|
19951 1.38629 1.38629 1.38629 1.38629
|
|
19952 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19953 51 0.28818 2.60848 2.42319 2.42940 51 a - - -
|
|
19954 1.38629 1.38629 1.38629 1.38629
|
|
19955 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19956 52 2.46232 0.33808 2.58153 2.07174 52 c - - -
|
|
19957 1.38629 1.38629 1.38629 1.38629
|
|
19958 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19959 53 2.46232 0.33808 2.58153 2.07174 53 c - - -
|
|
19960 1.38629 1.38629 1.38629 1.38629
|
|
19961 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19962 54 0.28818 2.60848 2.42319 2.42940 54 a - - -
|
|
19963 1.38629 1.38629 1.38629 1.38629
|
|
19964 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19965 55 2.46232 0.33808 2.58153 2.07174 55 c - - -
|
|
19966 1.38629 1.38629 1.38629 1.38629
|
|
19967 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19968 56 2.31486 2.12647 2.41211 0.36768 56 t - - -
|
|
19969 1.38629 1.38629 1.38629 1.38629
|
|
19970 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19971 57 2.46232 0.33808 2.58153 2.07174 57 c - - -
|
|
19972 1.38629 1.38629 1.38629 1.38629
|
|
19973 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19974 58 2.31486 2.12647 2.41211 0.36768 58 t - - -
|
|
19975 1.38629 1.38629 1.38629 1.38629
|
|
19976 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19977 59 0.28818 2.60848 2.42319 2.42940 59 a - - -
|
|
19978 1.38629 1.38629 1.38629 1.38629
|
|
19979 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19980 60 2.31486 2.12647 2.41211 0.36768 60 t - - -
|
|
19981 1.38629 1.38629 1.38629 1.38629
|
|
19982 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19983 61 2.31486 2.12647 2.41211 0.36768 61 t - - -
|
|
19984 1.38629 1.38629 1.38629 1.38629
|
|
19985 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19986 62 2.31486 2.12647 2.41211 0.36768 62 t - - -
|
|
19987 1.38629 1.38629 1.38629 1.38629
|
|
19988 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19989 63 2.31486 2.12647 2.41211 0.36768 63 t - - -
|
|
19990 1.38629 1.38629 1.38629 1.38629
|
|
19991 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19992 64 2.38910 2.82844 0.25233 2.62837 64 g - - -
|
|
19993 1.38629 1.38629 1.38629 1.38629
|
|
19994 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19995 65 2.31486 2.12647 2.41211 0.36768 65 t - - -
|
|
19996 1.38629 1.38629 1.38629 1.38629
|
|
19997 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
19998 66 2.38910 2.82844 0.25233 2.62837 66 g - - -
|
|
19999 1.38629 1.38629 1.38629 1.38629
|
|
20000 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
20001 67 2.46232 0.33808 2.58153 2.07174 67 c - - -
|
|
20002 1.38629 1.38629 1.38629 1.38629
|
|
20003 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
20004 68 0.28818 2.60848 2.42319 2.42940 68 a - - -
|
|
20005 1.38629 1.38629 1.38629 1.38629
|
|
20006 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
20007 69 2.31486 2.12647 2.41211 0.36768 69 t - - -
|
|
20008 1.38629 1.38629 1.38629 1.38629
|
|
20009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
20010 70 2.46232 0.33808 2.58153 2.07174 70 c - - -
|
|
20011 1.38629 1.38629 1.38629 1.38629
|
|
20012 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
20013 //
|