Mercurial > repos > dave > pipelign
comparison test-data/files/NODE_21.aln @ 0:9a3a2e04f47a draft default tip
Uploaded
| author | dave |
|---|---|
| date | Mon, 10 Jun 2019 16:04:10 -0400 |
| parents | |
| children |
comparison
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| -1:000000000000 | 0:9a3a2e04f47a |
|---|---|
| 1 >K03455|HIVHXB2CG_418_930_3_0_0_1_0_0_14/1 | |
| 2 ------------------------------------------------------------ | |
| 3 --GATCCTGC-------------ATATAAGCAGCAGCTTTTTGCCTTTACTGGTTCTCTC | |
| 4 TGGTTAGACCAGATCTGAGCCTGGG----------------------- | |
| 5 >K03455|HIVHXB2CG_7976_8475_3_0_0_1_0_0_61/1 | |
| 6 ------------------------------------------------------------ | |
| 7 -CAGATACCT-------------AAATGATCAACAGCTCCTGGGGATT-TGGGGTTGCTC | |
| 8 TGGAAAACTCATTTGCACCCCTGCT----------------------- | |
| 9 >K03455|HIVHXB2CG_7932_8405_1_0_0_1_0_0_17/1 | |
| 10 GTCTGG----------GGCATCAAGCAGCTCCAGG-------CAAGAATGCTGGCTGTGG | |
| 11 AAAGATACCT-------------AAAGGATCAACAGCTCC-------------------- | |
| 12 ------------------------------------------------ | |
| 13 >K03455|HIVHXB2CG_6869_7379_1_0_0_3_0_1_11/1 | |
| 14 -----------------------------------------------------ACAGTAG | |
| 15 AAAAATTCCCCTCCACCATTAAAACTGTGGTTACAATATC---------TGGGTCCCCTC | |
| 16 C-------------TGAGGATTGGT----------------------- | |
| 17 >K03455|HIVHXB2CG_6865_7379_1_0_0_0_0_1_4d/1 | |
| 18 -----------------------------------------------------ACAGTAG | |
| 19 AAAAATTCCCCTCCACAATTAAAACTGTGGTTACAATTTC---------TGGGTCCCCTC | |
| 20 C-------------TGAGGATTGCT----------------------- | |
| 21 >K03455|HIVHXB2CG_8069_8641_1_0_0_0_0_0_38/1 | |
| 22 TCCTG----------------------ACTCCAA------------------TACTGTAG | |
| 23 GAGATTCCAC-----------------------CAATATT---------TGAGGGCTTCC | |
| 24 CACCCCCTGCGTCCCAGAAGTT-------------------------- | |
| 25 >K03455|HIVHXB2CG_6040_6545_1_0_0_0_0_0_2/1 | |
| 26 --------------------------ATCCTCAT-------------GCATCTGTTCTAC | |
| 27 CATGTCATTTTT-----------CCACATGTTAAAATTTTCTGT-----CACATTTAC-- | |
| 28 -CAATACT---------------------------------------- | |
| 29 >K03455|HIVHXB2CG_6480_6947_0_0_0_2_0_0_32/1 | |
| 30 --------------------------TT---------------------GGTAAATGTGA | |
| 31 CAGAAAATTTTA-----------ACATGTGGAAAAATGACATGG-----TAGA---AC-- | |
| 32 -AGATGCA----------------------TGAGGATATAA------- | |
| 33 >K03455|HIVHXB2CG_6482_6962_0_0_0_1_0_0_35/1 | |
| 34 -------------------------------------------------GGTAAATGTGA | |
| 35 CAGAAAATTTTA-----------ACATGTGGAAAAATGACATGG-----TAGA---AC-- | |
| 36 -AGATGCA----------------------TGAGGATATAAT-----C | |
| 37 >K03455|HIVHXB2CG_5990_6505_1_0_0_0_0_0_3f/1 | |
| 38 ------------------------------------------------------------ | |
| 39 ------------------------------TTAAAATTTTCTGT-----CACATTTAC-- | |
| 40 -CAATACTACTTCTTGTGGGTTGGGGTCTGTGGGTACACAGGCATGTG | |
| 41 >K03455|HIVHXB2CG_2700_3243_0_0_0_3_1_0_51/1 | |
| 42 ------------------------------------------------CACCCATCCAAA | |
| 43 GGAATTGAGGTT-----------CTTT---CTGATGTTTTTTGT-----CTGGTGTGG-- | |
| 44 -TAAGTCCCCACCTCGACAG---------------------------- | |
| 45 >K03455|HIVHXB2CG_313_880_0_0_0_2_0_0_54/1 | |
| 46 CTTTA----------------TATTTTTTCTTAC-------------CCCCTGGCCTTAA | |
| 47 CCGAATTTTTTC-----------CCATCGATCTAATTCTCC--------CCCGCTTAA-- | |
| 48 ------------------------------------------------ | |
| 49 >K03455|HIVHXB2CG_121_652_1_0_0_0_0_0_5f/1 | |
| 50 TCC------------------CTGTTCG---------------------GGCGCCACTGC | |
| 51 TAGAGATTTTCC-----------ACACTGACTAAAAGGGTCTGA-----GGGA---TCTC | |
| 52 TAGTTACC---------------------------------------- | |
| 53 >K03455|HIVHXB2CG_6045_6577_2_0_0_1_0_0_47/1 | |
| 54 ----------------AGTAAGTAGTACCTGTAAC--GCAACCTATACCAATAG-TAGCA | |
| 55 ATAGTAGCATTA-----------GTAGTAGCACTAATAAT-------------------- | |
| 56 ------------------------------------------------ | |
| 57 >K03455|HIVHXB2CG_6065_6509_1_0_0_1_0_0_3a/1 | |
| 58 --------------------------------------CAACCTATACCAATAG-TAGCA | |
| 59 ATAGTAGCATTA-----------GTAGTAGCAATAATAATAGCAATAGTTGAGTGGTC-- | |
| 60 ------------------------------------------CA---- | |
| 61 >K03455|HIVHXB2CG_4276_4897_1_0_0_1_0_0_3d/1 | |
| 62 ACAGTAATTGGAGAGCAATGGCTAGTGATTTTAACCTGCCACCTGTAGTAGCAA-AAGAA | |
| 63 ATAGTAGCCCG------------------------------------------------- | |
| 64 ------------------------------------------------ | |
| 65 >K03455|HIVHXB2CG_3823_4361_1_0_0_0_0_0_30/1 | |
| 66 -------------------------------------------TATGGTACCAGTTAGAG | |
| 67 AAAGAACCCCTA-----------GTAGGAGCAGAAACCTTCTATGTAGATGGGGCAGC-- | |
| 68 ------------------------------------------TAACAG |