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annotate test-data/files/NODE_16.aln @ 0:9a3a2e04f47a draft default tip

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author dave
date Mon, 10 Jun 2019 16:04:10 -0400
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1 >K03455|HIVHXB2CG_6501_7035_0_0_0_0_0_0_b/1
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2 ---------------------------CTACCTCTTCTTCTGCTAGACTGCC-------A
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3 TTTAACAGCAGTTGAGTTGATACTACTGGCCTAATTCCATGTGT
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4 >K03455|HIVHXB2CG_6976_7493_0_0_0_0_0_0_12/1
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5 -------------TTAGGCCAGTAGTATCAACTCAACTGCTGTTAAATGGCA-------G
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6 TCTAGCAGAAGAAGAGGTAGTAAT-------TAGATC-------
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7 >K03455|HIVHXB2CG_5516_5958_3_0_0_2_0_0_20/1
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8 ---TAACGCCACCTTTGCCTAGTGTTACGAAACTGCCAGAGGATAGATGGAAC---AAGC
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9 CCCAGAAGACGAAGGG----------------------------
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10 >K03455|HIVHXB2CG_8434_8946_0_0_0_1_0_0_21/1
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11 GTGGAGA--------GAGAGACAGAGACAGATCCATTCGATTAGTGAACGGATCC-----
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12 -TTGGCACTTATCTGGGA-------------CGATCT-------
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13 >K03455|HIVHXB2CG_7957_8508_2_0_0_2_1_0_2c/1
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14 TCCGAAGATCGTCCCAGATAAGTGCCAAGGATCCGTTCACTACTCGAATGGATCTGA--C
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15 TCTGTCTCT-------------------------CTC-------
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16 >K03455|HIVHXB2CG_5251_5720_0_0_0_1_0_0_4/1
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17 CCAAGTA-----TCCCCATAAGTTTCATAGATATGATGCCCTAAGCCATGGAGCCAAATC
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18 CTAGGAAAATGTCTA-----------------------------
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19 >K03455|HIVHXB2CG_5199_5715_1_0_0_2_0_0_1a/1
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20 -----TA-----TCCCCATAAGTTTCATCGATATGTTGCCCTAAGCGATGGAGCCAAATC
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21 CTAGGAAAATGTCTAAC-----------------AGC-------
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22 >K03455|HIVHXB2CG_1672_2143_3_0_0_2_0_0_1d/1
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23 ----TGC-----TCTGAAGAAAATTCCCTG----GCCTTCCCTTGTAGTAAGGCCATATC
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24 TTCCCTAAAAAATTAGC-----------------CTGTCT----
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25 >K03455|HIVHXB2CG_2020_2541_3_0_0_6_0_0_2f/1
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26 AAGTGCAA------------------GCAATCTGATTCACCCGATTTCTTCC-------A
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27 ATTATGATGACAGGTGTAGGTCCTACTAATACAGT---------