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annotate test-data/files/NODE_11.aln @ 0:9a3a2e04f47a draft default tip

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author dave
date Mon, 10 Jun 2019 16:04:10 -0400
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1 >K03455|HIVHXB2CG_4939_5430_1_0_0_0_0_0_49/1
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2 ---------------GACCAGCAAAGCACCTCTGGAAAGGTGAAGGGGCAGTAGTAATAC
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3 AAGATAATAGTGACATAAAAGTAGT-----------------------------------
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4 ----------------------
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5 >K03455|HIVHXB2CG_4957_5462_2_0_0_1_0_0_2e/1
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6 ---------------------------------GGAAAGGTGAAGGGGCAGTAGTAATAC
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7 AAGATAATAGTGACATAACAGTAGTG----------------------------------
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8 -----CGAAGAAGAAAAGCAAA
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9 >K03455|HIVHXB2CG_3027_3517_0_0_0_6_0_0_53/1
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10 --------------------------------------TTTTATGGTTCATAATCCACTC
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11 CATGTACTGGTTCTTTTAGAATCTCTCATTTTTCT--GCCCGTTCTAGCT----------
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12 ----------------------
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13 >K03455|HIVHXB2CG_3441_3888_1_0_0_0_0_0_5c/1
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14 -------------GAAGCAGAGCTAGAACTGGCAGAAAACAGAGAGATTCTAAAATAACC
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15 AGTACATGGAGTGTATTATGACC-------------------------------------
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16 ----------------------
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17 >K03455|HIVHXB2CG_5108_5621_3_0_0_2_0_0_23/1
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18 ---------------------------------------------CTCTAGTGTCCATTC
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19 ATTGTGTGGCTCCCTCTGTGGCCCTTGGTCTTCTTGGGCTTGTTCCATCTCTCCT-----
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20 ----------------------
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21 >K03455|HIVHXB2CG_3447_3973_0_0_0_1_0_0_1f/1
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22 TGATTTGTTGTGTCAGTTAGGGTGACAACT--------TTTTGTGTTCCTCTATTAGTAA
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23 CATATCCTGCTTTTCCTA------------------------------------------
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24 ----------------------
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25 >K03455|HIVHXB2CG_2276_2810_0_0_0_0_0_0_58/1
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26 ----------------------------------GAAGTCTTGAGTTCTCTTATTAA---
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27 ---------GTTCTCTGAAATCTACTAATTTTCTCCATTTAGTACTGTCTTTTTTC----
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28 ----------------------
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29 >K03455|HIVHXB2CG_2252_2786_0_0_0_0_0_0_c/1
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30 ------------------------------------------------------------
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31 ----------TTCTCTGAAATCTACTAATTTTCTCCATTTAGTACTGTCTTTTTTCTTT-
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32 -ATGGCAAATACTGGAGTATTG
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33 >K03455|HIVHXB2CG_4803_5329_1_0_0_2_0_0_1b/1
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34 ---------------GGGGGGAACAGTGCAGGGGAAAGAATAGTAGACATAATAGCAACA
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35 GACATACAAACTAAAGAATTACAA------------------------------------
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36 ---------------------A
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37 >K03455|HIVHXB2CG_4642_5125_0_0_0_3_0_0_28/1
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38 ------------------------------------------------------------
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39 ------------TAAGGTGTTTTACTAAACTTTTCCATGTTGTAATCCTCATCCTGTCTC
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40 CTTGCCACACAATCATCACCTG