Mercurial > repos > dave > data_manager_fetch_index_maf

annotate data_manager_conf.xml @ 2:c5918c35d9f8 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 0cec5f95ad0b141a9cc5be00be6d2574609b661a"
author dave
date Wed, 10 Jun 2020 17:20:38 +0000
parents 75264d08904c
children
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0
47e20be29e79 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 0cec5f95ad0b141a9cc5be00be6d2574609b661a"
dave
parents:
diff changeset
1 <?xml version="1.0"?>
47e20be29e79 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 0cec5f95ad0b141a9cc5be00be6d2574609b661a"
dave
parents:
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2 <data_managers>
47e20be29e79 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 0cec5f95ad0b141a9cc5be00be6d2574609b661a"
dave
parents:
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3 <data_manager tool_file="data_manager/data_manager_fetch_and_index_maf.xml" id="data_manager_fetch_and_index_maf">
47e20be29e79 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 0cec5f95ad0b141a9cc5be00be6d2574609b661a"
dave
parents:
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4 <data_table name="indexed_maf_files">
47e20be29e79 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 0cec5f95ad0b141a9cc5be00be6d2574609b661a"
dave
parents:
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5 <output>
47e20be29e79 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 0cec5f95ad0b141a9cc5be00be6d2574609b661a"
dave
parents:
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6 <column name="name" />
47e20be29e79 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 0cec5f95ad0b141a9cc5be00be6d2574609b661a"
dave
parents:
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7 <column name="value" />
47e20be29e79 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 0cec5f95ad0b141a9cc5be00be6d2574609b661a"
dave
parents:
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8 <column name="indexed_for" />
47e20be29e79 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 0cec5f95ad0b141a9cc5be00be6d2574609b661a"
dave
parents:
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9 <column name="exists_in_maf" />
47e20be29e79 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 0cec5f95ad0b141a9cc5be00be6d2574609b661a"
dave
parents:
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10 <column name="path" output_ref="output" >
47e20be29e79 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 0cec5f95ad0b141a9cc5be00be6d2574609b661a"
dave
parents:
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11 <move type="directory" relativize_symlinks="True">
47e20be29e79 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 0cec5f95ad0b141a9cc5be00be6d2574609b661a"
dave
parents:
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12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/align/${value}</target>
47e20be29e79 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 0cec5f95ad0b141a9cc5be00be6d2574609b661a"
dave
parents:
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13 </move>
47e20be29e79 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 0cec5f95ad0b141a9cc5be00be6d2574609b661a"
dave
parents:
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14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/align/${value}</value_translation>
47e20be29e79 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 0cec5f95ad0b141a9cc5be00be6d2574609b661a"
dave
parents:
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15 <value_translation type="function">abspath</value_translation>
47e20be29e79 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 0cec5f95ad0b141a9cc5be00be6d2574609b661a"
dave
parents:
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16 </column>
47e20be29e79 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 0cec5f95ad0b141a9cc5be00be6d2574609b661a"
dave
parents:
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17 </output>
47e20be29e79 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 0cec5f95ad0b141a9cc5be00be6d2574609b661a"
dave
parents:
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18 </data_table>
47e20be29e79 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 0cec5f95ad0b141a9cc5be00be6d2574609b661a"
dave
parents:
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19 </data_manager>
47e20be29e79 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 0cec5f95ad0b141a9cc5be00be6d2574609b661a"
dave
parents:
diff changeset
20 </data_managers>