diff data_manager_conf.xml @ 0:47e20be29e79 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 0cec5f95ad0b141a9cc5be00be6d2574609b661a"
author dave
date Wed, 10 Jun 2020 16:05:50 +0000
parents
children 75264d08904c
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager_conf.xml	Wed Jun 10 16:05:50 2020 +0000
@@ -0,0 +1,21 @@
+<?xml version="1.0"?>
+<data_managers>
+
+    <data_manager tool_file="data_manager/data_manager_fetch_and_index_maf.xml" id="data_manager_fetch_and_index_maf">
+        <data_table name="indexed_maf_files">
+            <output>
+                <column name="name" />
+                <column name="value" />
+                <column name="indexed_for" />
+                <column name="exists_in_maf" />
+                <column name="path" output_ref="output" >
+                    <move type="directory" relativize_symlinks="True">
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/align/${value}</target>
+                    </move>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/align/${value}</value_translation>
+                    <value_translation type="function">abspath</value_translation>
+                </column>
+            </output>
+        </data_table>
+    </data_manager>
+</data_managers>
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