Mercurial > repos > crusoe > khmer
changeset 22:e49de8a4c2bf
more tests
| author | Michael R. Crusoe <mcrusoe@msu.edu> |
|---|---|
| date | Sun, 29 Jun 2014 12:41:34 -0400 |
| parents | bc8b334e8f00 |
| children | 76446fd9f616 |
| files | abundance-dist.xml |
| diffstat | 1 files changed, 25 insertions(+), 14 deletions(-) [+] |
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--- a/abundance-dist.xml Sun Jun 29 12:30:34 2014 -0400 +++ b/abundance-dist.xml Sun Jun 29 12:41:34 2014 -0400 @@ -35,20 +35,31 @@ level="fatal" /> </stdio> - <!-- [OPTIONAL] Tests to be run manually by the Galaxy admin --> - <tests> - <!-- [HELP] Test files have to be in the ~/test-data directory - <test> - <param name="input" value="input_test.tab" /> - <param name="int" value="10" /> - <output name="output" file="output_test.txt" /> - </test> --> - <!-- [HELP] Multiple tests can be defined with different parameters --> -<!-- - <test> - </test> ---> - </tests> + <tests> + <test> + <param name="input_sequence_filename" value="test-abund-read-2.fa" /> + <param name="input_counting_table_filename" value="test-abund-read-2.ct" /> + <param name="no_zero" value="false" /> + <output name="output_histogram_filename"> + <assert_contents> + <has_text text="1 96 96 0.98" /> + <has_text text="1001 2 98 1.0" /> + </assert_contents> + </output> + </test> + <test> + <param name="input_sequence_filename" value="test-abund-read-2.fa" /> + <param name="input_counting_table_filename" value="test-abund-read-2.ct" /> + <param name="no_zero" value="false" /> + <param name="no_bigcount" value="false" /> + <output name="output_histogram_filename"> + <assert_contents> + <has_text text="1 96 96 0.98" /> + <has_text text="255 2 98 1.0" /> + </assert_contents> + </output> + </test> + </tests> <!-- [OPTIONAL] Help displayed in Galaxy --> <!--