Mercurial > repos > crusoe > khmer

changeset 30:36e447a9ac52

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Use API for some tests, catch rename for other
author Michael R. Crusoe <mcrusoe@msu.edu>
date Sun, 29 Jun 2014 17:13:59 -0400
parents e825c66d31de
children 00a6437ee54b
files abundance-dist-single.xml filter-abund.xml
diffstat 2 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/abundance-dist-single.xml	Sun Jun 29 16:22:35 2014 -0400
+++ b/abundance-dist-single.xml	Sun Jun 29 17:13:59 2014 -0400
@@ -75,7 +75,7 @@
 		    <param name="n_tables" value="2" />
 		    <param name="ksize" value="17" />
 		    <param name="no_zero" value="false" />
-		    <param name="no_bigcount" value="false" />
+		    <param name="bigcount" value="false" />
 		    <output name="output_histogram_filename">
 			    <assert_contents>
 				    <has_text text="1 96 96 0.98" />
--- a/filter-abund.xml	Sun Jun 29 16:22:35 2014 -0400
+++ b/filter-abund.xml	Sun Jun 29 17:13:59 2014 -0400
@@ -49,7 +49,7 @@
 		<exit_code	range="1:"
 				level="fatal" />
 	</stdio>
-        <tests>
+        <tests interactor="api">
                 <test>
                         <param name="inputs" value="test-abund-read-2.fa" />
                         <param name="input_counting_table_filename" value="test-abund-read-2.ct" />