annotate gedlab.py @ 35:be178f712bb1

Uploaded datatype definitions.
author devteam
date Sun, 29 Jun 2014 18:13:23 -0400
parents
children 3d65329a491d
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
35
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
1 """
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
2 k-mer count and presence
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
3 """
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
4
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
5 from galaxy.datatypes.binary import Binary
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
6
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
7 import os
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
8 import logging
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
9
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
10 log = logging.getLogger(__name__)
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
11
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
12 class Count( Binary ):
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
13
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
14 def __init__( self, **kwd ):
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
15 Binary.__init__( self, **kwd )
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
16
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
17
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
18 class Presence( Binary ):
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
19
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
20 def __init__( self, **kwd ):
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
21 Binary.__init__( self, **kwd )
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
22
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
23 Binary.register_unsniffable_binary_ext("ct")
be178f712bb1 Uploaded datatype definitions.
devteam
parents:
diff changeset
24 Binary.register_unsniffable_binary_ext("pt")