Mercurial > repos > crusoe > khmer
annotate gedlab.py @ 48:bcd19db01a6b
fix filter-abund file name
| author | Michael R. Crusoe <mcrusoe@msu.edu> |
|---|---|
| date | Sat, 12 Jul 2014 15:18:24 -0400 |
| parents | be178f712bb1 |
| children | 3d65329a491d |
| rev | line source |
|---|---|
| 35 | 1 """ |
| 2 k-mer count and presence | |
| 3 """ | |
| 4 | |
| 5 from galaxy.datatypes.binary import Binary | |
| 6 | |
| 7 import os | |
| 8 import logging | |
| 9 | |
| 10 log = logging.getLogger(__name__) | |
| 11 | |
| 12 class Count( Binary ): | |
| 13 | |
| 14 def __init__( self, **kwd ): | |
| 15 Binary.__init__( self, **kwd ) | |
| 16 | |
| 17 | |
| 18 class Presence( Binary ): | |
| 19 | |
| 20 def __init__( self, **kwd ): | |
| 21 Binary.__init__( self, **kwd ) | |
| 22 | |
| 23 Binary.register_unsniffable_binary_ext("ct") | |
| 24 Binary.register_unsniffable_binary_ext("pt") |
