Mercurial > repos > cropgeeks > ukseed

changeset 2:4e2b3a96fee1 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author cropgeeks
date Tue, 17 Apr 2018 08:21:30 -0400
parents a8f30e5859c9
children dde8fec1b31e
files ukseed.xml
diffstat 1 files changed, 6 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/ukseed.xml	Tue Apr 17 08:09:21 2018 -0400
+++ b/ukseed.xml	Tue Apr 17 08:21:30 2018 -0400
@@ -4,13 +4,14 @@
         <requirement type="package" version="0.14.1">pandas</requirement>
     </requirements>
 -->
-    <command>
+    <command><![CDATA[
 	    Rscript --vanilla $__tool_directory__/dartseq_seeduk_1.R $input
-		
+		&&		
 		plink --bfile test --recode A 
-		
-		Rscript --vanilla $__tool_directory__/dartseq_seeduk_2.R $output
-    </command>
+		&&		
+		Rscript --vanilla $__tool_directory__/dartseq_seeduk_2.R $output		
+    ]]></command>
+	
     <inputs>
         <param format="csv" name="input" type="data" label="Input file"
             help="Input file of genotype data"/>