annotate tool_dependencies.xml @ 8:287396f1f027 draft

Uploaded
author cjav
date Tue, 24 Sep 2013 10:09:18 -0400
parents a9368d6f0519
children 068b92f3898b
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
e402eb99165b Uploaded
cjav
parents:
diff changeset
1 <?xml version="1.0"?>
e402eb99165b Uploaded
cjav
parents:
diff changeset
2 <tool_dependency>
2
3c646b8328bb Bump biopython version to 1.62.
cjav
parents: 1
diff changeset
3 <package name="biopython" version="1.62">
3c646b8328bb Bump biopython version to 1.62.
cjav
parents: 1
diff changeset
4 <repository changeset_revision="ac9cc2992b69" name="package_biopython_1_62" owner="biopython" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
0
e402eb99165b Uploaded
cjav
parents:
diff changeset
5 </package>
e402eb99165b Uploaded
cjav
parents:
diff changeset
6 <package name="ngs-tools" version="0.1.6">
8
287396f1f027 Uploaded
cjav
parents: 7
diff changeset
7 <readme>
287396f1f027 Uploaded
cjav
parents: 7
diff changeset
8 This Galaxy Tool Shed package installs ngs-tools. This requires and assumes a
287396f1f027 Uploaded
cjav
parents: 7
diff changeset
9 standard C compiler is already installed, along with the Python header files.
287396f1f027 Uploaded
cjav
parents: 7
diff changeset
10
287396f1f027 Uploaded
cjav
parents: 7
diff changeset
11 Development of this dependency definition is being done here on GitHub:
287396f1f027 Uploaded
cjav
parents: 7
diff changeset
12 https://github.com/cjav/ngs-tools/tree/master/galaxy-tools
287396f1f027 Uploaded
cjav
parents: 7
diff changeset
13 </readme>
0
e402eb99165b Uploaded
cjav
parents:
diff changeset
14 <install version="1.0">
8
287396f1f027 Uploaded
cjav
parents: 7
diff changeset
15 <action type="set_environment_for_install">
287396f1f027 Uploaded
cjav
parents: 7
diff changeset
16 <repository name="package_biopython_1_62" owner="biopython">
287396f1f027 Uploaded
cjav
parents: 7
diff changeset
17 <package name="biopython" version="1.62" />
287396f1f027 Uploaded
cjav
parents: 7
diff changeset
18 </repository>
287396f1f027 Uploaded
cjav
parents: 7
diff changeset
19 </action>
0
e402eb99165b Uploaded
cjav
parents:
diff changeset
20 <actions>
8
287396f1f027 Uploaded
cjav
parents: 7
diff changeset
21 <action type="setup_virtualenv">
287396f1f027 Uploaded
cjav
parents: 7
diff changeset
22 docopt==0.6.1
287396f1f027 Uploaded
cjav
parents: 7
diff changeset
23 biopython==1.62
287396f1f027 Uploaded
cjav
parents: 7
diff changeset
24 python-levenshtein==0.10.2
287396f1f027 Uploaded
cjav
parents: 7
diff changeset
25 ngs-tools==0.1.6
287396f1f027 Uploaded
cjav
parents: 7
diff changeset
26 </action>
0
e402eb99165b Uploaded
cjav
parents:
diff changeset
27 </actions>
e402eb99165b Uploaded
cjav
parents:
diff changeset
28 </install>
8
287396f1f027 Uploaded
cjav
parents: 7
diff changeset
29
0
e402eb99165b Uploaded
cjav
parents:
diff changeset
30 </package>
e402eb99165b Uploaded
cjav
parents:
diff changeset
31 </tool_dependency>