view data_manager_monorail_index/data_manager_conf.xml @ 21:179527791fab draft

Uploaded

<?xml version="1.0"?>
<data_managers>
    <data_manager tool_file="data_manager/monorail_index_fetcher.xml" id="monorail_index_fetcher" version="1.0.0">
    <data_table name="monorail_index">
            <output>
                <column name="value"/>
                <column name="name"/>
                <column name="dbkey"/>
                <column name="version"/>
                <column name="path" output_ref="out_file">
                    <move relative_symlinks="True" type="directory">
                        <!-- no need to set source, gets taken from out_dir.extra_files_path -->
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">monorail/${version}</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/monorail/${version}<value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
                <column name="exons_path">
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/monorail/${version}/${dbkey}/gtf/exons.bed</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
   </data_table>
</data_manager>
</data_managers>