diff snp_caller.xml @ 0:0fd352f62446 draft default tip

planemo upload for repository https://github.com/ChrisD11/Duplicon commit 3ee0594c692faac542ffa58f4339d79b9b8aefbd-dirty

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/snp_caller.xml	Sun Feb 21 06:05:24 2016 -0500
@@ -0,0 +1,23 @@
+<tool id="snp_caller" name="Identify Snips" version="0.1.0">
+  <description>for single-end or paired-end data</description>
+  <command>$__tool_directory__/snp -amr_fp $amr_fp -samse $samse -out_fp $out_fp</command>
+  <inputs>
+    <param format="fasta" name="amr_fp" type="data" label="Input fasta file"/>
+    <param format="sam" name ="samse" type="data" label="Input SAM file"/>
+  </inputs>
+  <outputs>
+    <data format="tabular" name="out_fp" />
+  </outputs>
+
+<tests>
+  <test>
+    <param name="amr_fp" value="amr.fa" />
+    <param name="samse" value="samse.sam" />
+    <param name="out_fp" file="res" />
+  </test>
+</tests>
+  <help>
+This tool identifies single nucleotide polymorphisms from both single-end and paired-end data.
+  </help>
+
+</tool>