Mercurial > repos > chrisd > coverage_sampler

changeset 26:89c934705f57 draft

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planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 8f733c58a6f788a3bb453090601a2f7e22f1f9ae-dirty
author chrisd
date Wed, 29 Jun 2016 03:43:56 -0400
parents 99d75ed267fd
children 084c1b36be0d
files coverage_sampler.xml
diffstat 1 files changed, 1 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/coverage_sampler.xml	Wed Jun 29 03:42:00 2016 -0400
+++ b/coverage_sampler.xml	Wed Jun 29 03:43:56 2016 -0400
@@ -69,10 +69,7 @@
 
 **Options**
 
-Options: -q INT    mask bases with quality lower than INT [0]
-         -X INT    mask bases with quality higher than INT [255]
-
-Options: -min     INT    Starting level to sample reads from (level is in percent)
+         -min     INT    Starting level to sample reads from (level is in percent)
          -max     INT    Ending level to sample reads from (level is in percent)
          -skip    INT    Number of levels to skip
          -t       INT    Gene fraction threshold (only genes with a gene fraction greater than this threshold are output)