Mercurial > repos > chrisd > coverage_sampler
changeset 32:8998b3f44018 draft
planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit f40bbce10577e858968aede35464f9c6cb5b2a95-dirty
author | chrisd |
---|---|
date | Wed, 29 Jun 2016 03:58:04 -0400 |
parents | 9b2f98681608 |
children | fab5cf882885 |
files | coverage_sampler.xml |
diffstat | 1 files changed, 5 insertions(+), 2 deletions(-) [+] |
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--- a/coverage_sampler.xml Wed Jun 29 03:55:15 2016 -0400 +++ b/coverage_sampler.xml Wed Jun 29 03:58:04 2016 -0400 @@ -56,8 +56,7 @@ <output name="output" file="csa_no_result" ftype="tabular"/> </test> </tests> - <help> -<![CDATA[ + <help><![CDATA[ **Coverage sampler** @@ -70,9 +69,13 @@ **Options** -min INT Starting level to sample reads from (level is in percent) + -max INT Ending level to sample reads from (level is in percent) + -skip INT Number of levels to skip + -samples INT Number of iterations per sample level + -t INT Gene fraction threshold (only genes with a gene fraction greater than this threshold are output) ------