Mercurial > repos > chrisd > coverage_sampler
changeset 37:520bc487403d draft
planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 660fc35f51cce194be9d5f050f7353b47ab23fd1-dirty
| author | chrisd |
|---|---|
| date | Wed, 29 Jun 2016 04:21:24 -0400 |
| parents | f4ace4f007e2 |
| children | 98a7da79f8a8 |
| files | coverage_sampler.xml |
| diffstat | 1 files changed, 6 insertions(+), 12 deletions(-) [+] |
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--- a/coverage_sampler.xml Wed Jun 29 04:06:00 2016 -0400 +++ b/coverage_sampler.xml Wed Jun 29 04:21:24 2016 -0400 @@ -82,19 +82,13 @@ **Output** -Output of this program is a tab delimited text file with following: - - Column Description - - Level The sampling level alignments were taken at +A tab delimited text file with the following columns:: - Iteration The ith iteration of the current sampling level - - Gene Id The reference sequence having a gene fraction greater than threshold - - Gene Fraction The overall fraction of the gene that was covered from the sample of alignments - - Hits The amount of times that the reference sequence was seen from the sample of alignments + Level The sampling levels alignments were taken at + Iteration The iteration at each sample level + Gene Id The reference name having a gene fraction greater than threshold + Gene Fraction The gene fraction for the current reference sequence (in percent) + Hits The amount of alignments associated with the reference sequence at the current sample level ------