Mercurial > repos > chrisd > coverage_sampler

annotate tool_dependencies.xml @ 15:233b2d979df4 draft

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planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 98296c46d15c170e77d5eefad61cc447378fa73a-dirty
author chrisd
date Wed, 29 Jun 2016 02:43:33 -0400
parents 65d8343a6122
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b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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1 <?xml version="1.0"?>
b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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2 <tool_dependency>
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chrisd
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3 <package name="coverage_sampler" version="0.1">
284dec15f7f4 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 454f675c3a74cb7eb99f83ab3a299b82ec5f92b2-dirty
chrisd
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4 <install version="1.0">
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b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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5 <actions>
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17bce2f348b6 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit cd12289e62a04427f3db8ae40246cf25b8486c74-dirty
chrisd
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6 <action type="shell_command">git clone --recursive https://github.com/cdeanj/coverage_sampler.git</action>
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b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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7 <action type="shell_command">make</action>
b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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8 <action type="move_file">
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65d8343a6122 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit a0f50dfb0809b4d2053cd8f5031efe6615fe4887-dirty
chrisd
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9 <source>csa</source>
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b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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10 <destination>$INSTALL_DIR/bin</destination>
b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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11 </action>
b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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12 <action type="set_environment">
b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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14 </action>
b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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15 </actions>
b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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16 </install>
b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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17 <readme>Compiling csa requires a C++ compiler</readme>
b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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18 </package>
b53a97d0d54c planemo upload for repository https://github.com/ChrisD11/csa_dep commit e9517a49dbeb556362b2bfafb62ca70af93106dd
chrisd
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19 </tool_dependency>